# terms

id: PBO:0016891
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longer transcript expressed during cold shock due to altered 3'-end processing","termid":"PBO:0016891"}


id: PBO:0067233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 304, pseudogene","termid":"PBO:0067233"}


id: PATO:0001807
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity to irradiation which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitivity to irradiation","termid":"PATO:0001806"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased sensitivity to irradiation","synonyms":[{"name":"low sensitivity to irradiation","type":"exact"}],"termid":"PATO:0001807"}


id: PBO:0071942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 19","termid":"PBO:0071942"}


id: GO:0032039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that stably associates with the C-terminus of RNA polymerase II and mediates 3'-end processing of small nuclear RNAs generated by RNA polymerase II.","definition_xrefs":["PMID:16239144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"integrator complex","termid":"GO:0032039"}


id: PBO:0078867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 2","termid":"PBO:0078867"}


id: PBO:0113393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; physical interaction with Atg27p suggests a possible role in autophagy; targeted to vacuole via AP-3 pathway","termid":"PBO:0113393"}


id: PBO:0067236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 307, pseudogene","termid":"PBO:0067236"}


id: GO:0050995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"negatively_regulates","term_name":"lipid catabolic process","termid":"GO:0016042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipid catabolic process","synonyms":[{"name":"down regulation of lipid catabolic process","type":"exact"},{"name":"down-regulation of lipid catabolic process","type":"exact"},{"name":"downregulation of lipid catabolic process","type":"exact"},{"name":"inhibition of lipid catabolic process","type":"narrow"},{"name":"negative regulation of lipid breakdown","type":"exact"},{"name":"negative regulation of lipid catabolism","type":"exact"},{"name":"negative regulation of lipid degradation","type":"exact"}],"termid":"GO:0050995"}


id: GO:0097342
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex whose core components are the receptor-interacting serine/threonine-protein kinases RIPK1 and RIPK3 (also called RIP1 and RIP3). Formation of the ripoptosome can induce an extrinsic apoptotic signaling pathway or a necroptotic signaling pathway. The composition of this protein complex may depend on several factors including nature of the signal, cell type and more.","definition_xrefs":["PMID:22274400","GOC:bhm","PMID:22265414","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"ripoptosome","synonyms":[{"name":"TNFR1 complex II","type":"narrow"},{"name":"Tnfr1-CII","type":"narrow"},{"name":"necrosome","type":"related"}],"termid":"GO:0097342"}


id: GO:0010588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vascular tissue pattern formation as it occurs in the cotyledon of vascular plants.","definition_xrefs":["PMID:10559439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem and phloem pattern formation","termid":"GO:0010051"},{"relation_name":"part_of","term_name":"cotyledon morphogenesis","termid":"GO:0048826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cotyledon vascular tissue pattern formation","termid":"GO:0010588"}


id: GO:1904837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a beta-catenin-TCF complex.","definition_xrefs":["PMID:18936100","GOC:TermGenie","GO_REF:0000079","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"beta-catenin-TCF complex assembly","synonyms":[{"name":"beta-catenin-TCF complex formation","type":"exact"},{"name":"beta-catenin/LEF complex assembly","type":"narrow"},{"name":"beta-catenin/LEF complex formation","type":"narrow"},{"name":"beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"beta-catenin/T-cell factor complex formation","type":"related"},{"name":"beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"}],"termid":"GO:1904837"}


id: GO:0052934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 [Fe(III)cytochrome c] + a primary alcohol = 2 [Fe(II)cytochrome c] + an aldehyde + 2 H+.","definition_xrefs":["RHEA:51020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alcohol dehydrogenase (cytochrome c) activity","secondary_identifiers":["UM-BBD_enzymeID:e0004","GO:0052935","MetaCyc:RXN-11333","EC:1.1.2.8","GO:0052936","KEGG_REACTION:R05285","KEGG_REACTION:R05198","GO:0018468"],"synonyms":[{"name":"2-chloroethanol:cytochrome c oxidoreductase activity","type":"narrow"},{"name":"PQQ-dependent alcohol dehydrogenase activity","type":"exact"},{"name":"alcohol dehydrogenase (acceptor) activity","type":"broad"},{"name":"alcohol:(acceptor) oxidoreductase activity","type":"related"},{"name":"alcohol:acceptor oxidoreductase activity","type":"related"},{"name":"alcohol:cytochrome c oxidoreductase activity","type":"exact"},{"name":"ethanol:cytochrome c oxidoreductase activity","type":"narrow"},{"name":"quinoprotein alcohol dehydrogenase activity","type":"related"}],"termid":"GO:0052934"}


id: GO:0090593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own histidine residues, or a histidine residue on an identical protein.","definition_xrefs":["PMID:15947782","PMID:8962061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine autophosphorylation","termid":"GO:0090593"}


id: GO:0038107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by a nodal protein binding of to an activin receptor on the surface of a target cell, which contributes to the establishment of an organism's body plan or part of an organism with respect to the left and right halves.","definition_xrefs":["GOC:BHF","PMID:20413706","PMID:17287255","PMID:12857784","GOC:vk"],"gene_count":0,"genotype_count":0,"name":"obsolete nodal signaling pathway involved in determination of left/right asymmetry (obsolete GO:0038107)","synonyms":[{"name":"nodal signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter by nodal signaling pathway, involved in determination of left/right symmetry","type":"exact"}],"termid":"GO:0038107"}


id: GO:0071589
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[104594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any pyridine nucleoside, one of a family of organic molecules consisting of a pyridine base covalently bonded to a sugar, usually ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"},{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyridine nucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleoside anabolism","type":"exact"},{"name":"pyridine nucleoside biosynthesis","type":"exact"},{"name":"pyridine nucleoside formation","type":"exact"},{"name":"pyridine nucleoside synthesis","type":"exact"}],"termid":"GO:0071589","terms_by_termid":{"GO:0071590":null,"GO:0071592":null}}


id: PR:P36582
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pck1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C-like 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.14c","synonyms":[{"name":"Spom972h-pck1","type":"exact"}],"termid":"PR:P36582"}


id: PR:O74515
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cia1 gene.","definition_xrefs":["UniProtKB:O74515","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone cia1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.05c","synonyms":[{"name":"Spom972h-cia1","type":"exact"},{"name":"anti-silencing function protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74515"}


id: PBO:0071345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 3","termid":"PBO:0071345"}


id: PBO:0034675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_monoacylglycerol_phosphate_chain_length","termid":"PBO:0034675"}


id: PBO:0031407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spheroid_vegetative_cell","termid":"PBO:0031407"}


id: GO:0046111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase biosynthetic process","termid":"GO:0009113"},{"relation_name":"is_a","term_name":"xanthine metabolic process","termid":"GO:0046110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"xanthine biosynthetic process","synonyms":[{"name":"xanthine anabolism","type":"exact"},{"name":"xanthine biosynthesis","type":"exact"},{"name":"xanthine formation","type":"exact"},{"name":"xanthine synthesis","type":"exact"}],"termid":"GO:0046111"}


id: PBO:0061036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIP7 pseudogene 2","termid":"PBO:0061036"}


id: MOD:00066
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-formylglycine.","definition_xrefs":["RESID:AA0057","PubMed:5139483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-formylglycine","synonyms":[{"name":"(formylamino)acetic acid","type":"exact"},{"name":"(formylamino)ethanoic acid","type":"exact"},{"name":"(formylazanyl)ethanoic acid","type":"exact"},{"name":"2-formamidoacetic acid","type":"exact"},{"name":"2-formamidoethanoic acid","type":"exact"},{"name":"MOD_RES N-formylglycine","type":"exact"},{"name":"N(alpha)-formylglycine","type":"exact"},{"name":"N-formylated glycine","type":"exact"},{"name":"N-formylglycine","type":"exact"},{"name":"NFoGly","type":"exact"}],"termid":"MOD:00066"}


id: PR:Q9P7F1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2E1P3.05c gene.","definition_xrefs":["UniProtKB:Q9P7F1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate-binding domain-containing protein C2E1P3.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P3.05c","synonyms":[{"name":"Spom972h-SPAC2E1P3.05c","type":"exact"}],"termid":"PR:Q9P7F1"}


id: GO:2000868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of estrone secretion","termid":"GO:2000867"},{"relation_name":"negatively_regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of estrone secretion","synonyms":[{"name":"negative regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"negative regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000868"}


id: PBO:0081169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 1","termid":"PBO:0081169"}


id: PBO:0031833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-peroxisomes_absent","termid":"PBO:0031833"}


id: PBO:0062947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 5","termid":"PBO:0062947"}


id: PR:O60112
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15C4.03 gene.","definition_xrefs":["UniProtKB:O60112","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Rab geranylgeranyltransferase C15C4.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.03","synonyms":[{"name":"Spom972h-SPBC15C4.03","type":"exact"}],"termid":"PR:O60112"}


id: PBO:0005724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle regulated GATA-type transcription factor Ams2","termid":"PBO:0005724"}


id: GO:0015964
data:
  {"annotated_genes":["SJAG_04169","SJAG_04939"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107536,113167],"is_not":false,"summary":null,"term":"GO:0015964"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diadenosine triphosphate, a derivative of the nucleoside adenosine with three phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate catabolic process","termid":"GO:0015961"},{"relation_name":"is_a","term_name":"diadenosine triphosphate metabolic process","termid":"GO:0015962"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04169":null,"SJAG_04939":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"diadenosine triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine triphosphate breakdown","type":"exact"},{"name":"diadenosine triphosphate catabolism","type":"exact"},{"name":"diadenosine triphosphate degradation","type":"exact"}],"termid":"GO:0015964","terms_by_termid":{"GO:0015964":null}}


id: PBO:0036257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd2 (predicted)","termid":"PBO:0036257"}


id: PBO:0076295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse differentiation inducing 1 like","termid":"PBO:0076295"}


id: PBO:0081319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 101 pseudogene 2","termid":"PBO:0081319"}


id: PBO:0064747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 83","termid":"PBO:0064747"}


id: PBO:0028554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_cytoplasmic_microtubule_depolymerization","termid":"PBO:0028554"}


id: GO:0034383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle clearance","synonyms":[{"name":"LDL clearance","type":"exact"}],"termid":"GO:0034383"}


id: PBO:0030803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030803"}


id: GO:1990406
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane, G protein-coupled signaling receptor complex recognized by calcitonin gene-related peptides (CGRP).","definition_xrefs":["PMID:20826335","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor complex","termid":"GO:1903439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CGRP receptor complex","synonyms":[{"name":"CGRP-R complex","type":"exact"},{"name":"Calcitonin-gene-related peptide receptor complex","type":"exact"},{"name":"calcitonin gene-related polypeptide receptor complex","type":"exact"}],"termid":"GO:1990406"}


id: PBO:0055782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LONRF2 pseudogene 2","termid":"PBO:0055782"}


id: PBO:0086334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proton:glutathione antiporter; localized to the vacuolar and plasma membranes; expressed at a very low level; potential role in resistance to oxidative stress and modulation of the PKA pathway; GEX2 has a paralog, GEX1, that arose from a segmental duplication","termid":"PBO:0086334"}


id: GO:0008935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-succinylbenzoyl-CoA + H+ = 1,4-dihydroxy-2-naphthoyl-CoA + H2O.","definition_xrefs":["RHEA:26562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"1,4-dihydroxy-2-naphthoyl-CoA synthase activity","secondary_identifiers":["EC:4.1.3.36","KEGG_REACTION:R04150","MetaCyc:NAPHTHOATE-SYN-RXN"],"synonyms":[{"name":"DHNA synthetase activity","type":"related"},{"name":"O-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing) activity","type":"related"},{"name":"dihydroxynaphthoate synthase activity","type":"related"},{"name":"dihydroxynaphthoic acid synthetase activity","type":"related"},{"name":"naphthoate synthase activity","type":"related"}],"termid":"GO:0008935"}


id: PBO:0078710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-5","termid":"PBO:0078710"}


id: GO:0035941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of androstenedione (androst-4-ene-3,17-dione) into the circulatory system.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"androstenedione secretion","synonyms":[{"name":"androst-4-ene-3,17-dione secretion","type":"exact"}],"termid":"GO:0035941"}


id: PBO:0080468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1A","termid":"PBO:0080468"}


id: GO:0004558
data:
  {"annotated_genes":["SJAG_02131","SJAG_03824"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97695,97696],"is_not":false,"summary":null,"term":"GO:0004558"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing alpha-(1->4)-linked alpha-D-glucose residues with release of alpha-D-glucose.","definition_xrefs":["EC:3.2.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-1,4-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5659861","Reactome:R-HSA-5659899","Reactome:R-HSA-5659922","GO:0016982","Reactome:R-HSA-189102","Reactome:R-HSA-191116","Reactome:R-HSA-5659879","GO:0004562","Reactome:R-HSA-191101","Reactome:R-HSA-191108","MetaCyc:MALTODEXGLUCOSID-RXN","Reactome:R-HSA-189053"],"synonyms":[{"name":"acid maltase activity","type":"related"},{"name":"alpha-D-glucosidase activity","type":"related"},{"name":"alpha-D-glucoside glucohydrolase activity","type":"related"},{"name":"alpha-glucopyranosidase activity","type":"related"},{"name":"alpha-glucosidase II","type":"related"},{"name":"alpha-glucoside hydrolase activity","type":"related"},{"name":"glucoinvertase activity","type":"related"},{"name":"glucosidoinvertase activity","type":"related"},{"name":"glucosidosucrase activity","type":"related"},{"name":"lysosomal alpha-glucosidase activity","type":"broad"},{"name":"maltase-glucoamylase activity","type":"related"}],"termid":"GO:0004558","terms_by_termid":{"GO:0004558":null}}


id: PR:P79009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2502 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S25-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC694.05c","synonyms":[{"name":"S31-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps2502","type":"exact"}],"termid":"PR:P79009"}


id: PBO:0038900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor B2","termid":"PBO:0038900"}


id: GO:0042695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The beginning of development of the breasts in the female.","definition_xrefs":["PMID:19117864","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of secondary female sexual characteristics","termid":"GO:0046543"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thelarche","secondary_identifiers":["Wikipedia:Thelarche"],"termid":"GO:0042695"}


id: PBO:0070982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 6","termid":"PBO:0070982"}


id: FYPO:0004537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to mitotic cell cycle spindle assembly checkpoint signaling does not occur. As a result, the septation initiation network (SIN) signaling pathway is activated despite activation of the mitotic spindle assembly checkpoint (SAC). Normally, under conditions that activate the SAC, SIN activation is inhibited and the cell cycle arrests in anaphase. In this phenotype, premature SIN activation leads to premature cytokinesis and the formation of cut cells.","definition_xrefs":["PomBase:mah","PMID:11952833","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_output","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"is_a","term_name":"abolished response to mitotic cell cycle checkpoint signaling","termid":"FYPO:0002518"},{"relation_name":"is_a","term_name":"abnormal response to mitotic cell cycle spindle assembly checkpoint signaling","termid":"FYPO:0004536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000298","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"mitotic spindle assembly checkpoint override","synonyms":[{"name":"SIN activation in presence of active mitotic SAC","type":"exact"},{"name":"abolished response to mitotic cell cycle spindle assembly checkpoint signaling","type":"exact"},{"name":"mitotic SAC override","type":"exact"},{"name":"mitotic cell cycle spindle assembly checkpoint override","type":"exact"},{"name":"septation initiation signaling activation in presence of active mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0004537"}


id: GO:0018039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-glutamine amide by hydrolysis and oxidation of an interior Gln-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0086"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-glutamine amidation (obsolete GO:0018039)","termid":"GO:0018039"}


id: PBO:0047061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120A opposite strand","termid":"PBO:0047061"}


id: GO:1902197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isovaleryl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:11231285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"},{"relation_name":"is_a","term_name":"isovaleryl-CoA(4-) metabolic process","termid":"GO:1902195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"isovaleryl-CoA(4-) biosynthetic process","synonyms":[{"name":"isovaleryl-CoA(4-) anabolism","type":"exact"},{"name":"isovaleryl-CoA(4-) biosynthesis","type":"exact"},{"name":"isovaleryl-CoA(4-) formation","type":"exact"},{"name":"isovaleryl-CoA(4-) synthesis","type":"exact"}],"termid":"GO:1902197"}


id: GO:0045729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phase of elevated metabolic activity, during which oxygen consumption increases, that occurs at fertilization. An enhanced uptake of oxygen leads to the production of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals. Capacitation, a necessary prerequisite event to successful fertilization, can be induced by reactive oxygen species in vitro; hydrogen peroxide is used as an extracellular oxidant to cross-link the protective surface envelopes.","definition_xrefs":["ISBN:0198506732","PMID:2537493","PMID:9013127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory burst","termid":"GO:0045730"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst at fertilization","synonyms":[{"name":"metabolic burst at fertilization","type":"exact"},{"name":"oxidative burst at fertilization","type":"exact"}],"termid":"GO:0045729"}


id: PBO:0090566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Emp24","termid":"PBO:0090566"}


id: PR:P87316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp15 gene.","definition_xrefs":["UniProtKB:P87316","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit epsilon, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.15c","synonyms":[{"name":"ATPase subunit epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-atp15","type":"exact"}],"termid":"PR:P87316"}


id: GO:0099049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the assembly of clathrin triskelia into a clathrin cage during endocytosis. Clathrin is recruited to the plasma membrane via interaction with scaffolding proteins that bridge between clathtin and cell surface receptors. Clathrin coat formation is concomittant with coated pit formation leading to endocytic vesicle formation.","definition_xrefs":["PMID:21779028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coat assembly","termid":"GO:0048268"},{"relation_name":"part_of","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0065003","GO:0006810","GO:0016192","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"clathrin coat assembly involved in endocytosis","termid":"GO:0099049"}


id: PBO:0053916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1213","termid":"PBO:0053916"}


id: PBO:0053229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing G protein-coupled receptor 5","termid":"PBO:0053229"}


id: FYPO:0001232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, and structure of the cell cortex are normal when the cell is subject to nitrogen starvation. The cell cortex is the region of a cell that lies just beneath the plasma membrane.","definition_xrefs":["PomBase:mah","GO:0005938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cortex morphology","termid":"FYPO:0001231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cortex morphology during nitrogen starvation","synonyms":[{"name":"normal cell cortex morphology during nitrogen depletion","type":"exact"},{"name":"normal cell cortex morphology during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0001232"}


id: PBO:0068274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 11 (inactive)","termid":"PBO:0068274"}


id: GO:0060588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of lipoprotein lipid oxidation. Lipoprotein lipid oxidation is the modification of a lipoprotein by oxidation of the lipid group.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipoprotein oxidation","termid":"GO:0034443"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"regulation of lipoprotein lipid oxidation","termid":"GO:0060587"},{"relation_name":"negatively_regulates","term_name":"lipoprotein lipid oxidation","termid":"GO:0034439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein lipid oxidation","termid":"GO:0060588"}


id: GO:0030424
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.","definition_xrefs":["GOC:nln","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon","secondary_identifiers":["Wikipedia:Axon","NIF_Subcellular:sao1770195789"],"termid":"GO:0030424"}


id: PR:O74508
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component spp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.05c","synonyms":[{"name":"COMPASS component spp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component spp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spf1","type":"exact"},{"name":"complex proteins associated with set1 protein spp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74508"}


id: GO:0044488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism effects a change in the frequency, rate or extent of the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["PMID:21781281","GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of ion channel activity in another organism","termid":"GO:0044561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of voltage-gated sodium channel activity in another organism","synonyms":[{"name":"modulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044488"}


id: PBO:0056565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance domain containing 2","termid":"PBO:0056565"}


id: MOD:00182
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to L-bromohistidine.","definition_xrefs":["PubMed:2076468","PubMed:9033387","Unimod:340#H","RESID:AA0173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated histidine","termid":"MOD:01049"},{"relation_name":"is_a","term_name":"monobrominated residue","termid":"MOD:01912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-bromohistidine","synonyms":[{"name":"Br1His","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-bromohistidine","type":"exact"},{"name":"MOD_RES Bromohistidine","type":"exact"},{"name":"bromination","type":"related"}],"termid":"MOD:00182"}


id: PBO:0025485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-dependent formaldehyde dehydrogenase Fmd2","termid":"PBO:0025485"}


id: PBO:0027547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_non-fermentable_carbon_source","termid":"PBO:0027547"}


id: PBO:0054314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1706","termid":"PBO:0054314"}


id: PBO:0062208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AC member 4 pseudogene","termid":"PBO:0062208"}


id: PR:O74518
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) RNA polymerase cid12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.12","synonyms":[{"name":"PAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cid12","type":"exact"},{"name":"caffeine-induced death protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polynucleotide adenylyltransferase cid12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74518"}


id: MOD:00970
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-hydroxy-allysine (Lys)","termid":"MOD:00970"}


id: PBO:0012053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box protein (predicted)","termid":"PBO:0012053"}


id: PBO:0011412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inhibited_by","termid":"PBO:0011412"}


id: PBO:0040087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase G","termid":"PBO:0040087"}


id: PBO:0076577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 5","termid":"PBO:0076577"}


id: PBO:0077879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripeptidyl peptidase 1","termid":"PBO:0077879"}


id: PBO:0113406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of vacuolar transporter chaperone (VTC) complex; involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion; important regulator of substrate invagination from the vacuolar membrane; targeted to vacuole via AP-3 pathway; VTC2 has a paralog, VTC3, that arose from the whole genome duplication","termid":"PBO:0113406"}


id: PBO:0081837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 772","termid":"PBO:0081837"}


id: GO:0045139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete copper sensitivity/resistance (obsolete GO:0045139)","synonyms":[{"name":"copper sensitivity/resistance","type":"exact"}],"termid":"GO:0045139"}


id: PBO:0083216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps TRP4; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083216"}


id: MOD:01670
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-methyl-L-lysine.","definition_xrefs":["RESID:AA0524","PubMed:16091367","PubMed:17260957","PubMed:16195462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"halogenated lysine","termid":"MOD:01672"},{"relation_name":"is_a","term_name":"monochlorinated residue","termid":"MOD:01911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-chloro-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(chloroamino)hexanoic acid","type":"exact"},{"name":"N(zeta)-chlorolysine","type":"exact"},{"name":"N6-chloro-L-lysine","type":"exact"},{"name":"N6ClLys","type":"exact"},{"name":"epsilon-chlorolysine","type":"exact"},{"name":"lysine chloramine","type":"exact"}],"termid":"MOD:01670"}


id: GO:0019728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of allysine to 2-aminoadipic acid.","definition_xrefs":["RESID:AA0122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein oxidation","termid":"GO:0018158"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-allysine oxidation to 2-aminoadipic acid","secondary_identifiers":["RESID:AA0370"],"termid":"GO:0019728"}


id: GO:0021725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior raphe nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:curators","GOC:dph","PMID:19003874","GOC:cjm","GOC:jid","GOC:cls","GOC:dgh","GOC:cvs","GO_REF:0000021","ZFA:0000440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior raphe nucleus development","synonyms":[{"name":"anterior raphe nucleus development","type":"broad"},{"name":"superior central nucleus development","type":"broad"}],"termid":"GO:0021725"}


id: GO:0048172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity.","definition_xrefs":["GOC:jid","PMID:11891290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuronal synaptic plasticity","termid":"GO:0048168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of short-term neuronal synaptic plasticity","termid":"GO:0048172"}


id: PBO:0056597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDH1 pseudogene 2","termid":"PBO:0056597"}


id: GO:0014724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of twitch skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"},{"relation_name":"regulates","term_name":"twitch skeletal muscle contraction","termid":"GO:0014721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of twitch skeletal muscle contraction","termid":"GO:0014724"}


id: PBO:0060712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 9","termid":"PBO:0060712"}


id: SO:0000920
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a cytidine.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000920 insert_C (obsolete SO:0000920)","synonyms":[{"name":"insert C","type":"exact"}],"termid":"SO:0000920"}


id: GO:1903554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway that is involved in the defense response to Gram-negative bacterium.","definition_xrefs":["GOC:kmv","PMID:25303524","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"defense response to Gram-negative bacterium","termid":"GO:0050829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in defense response to Gram-negative bacterium","synonyms":[{"name":"G protein coupled receptor protein signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G protein coupled receptor protein signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor protein signal transduction involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein-coupled receptor protein signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"GPCR signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"GPCR signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"}],"termid":"GO:1903554"}


id: GO:0017125
data:
  {"annotated_genes":["SJAG_03906"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99001],"is_not":false,"summary":null,"term":"GO:0017125"}]},"cv_name":"molecular_function","definition":"Catalysis of the insertion of a dCMP residue opposite a template abasic site in DNA.","definition_xrefs":["PMID:10535901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"deoxycytidyl transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-110308","GO:0019986"],"synonyms":[{"name":"deoxycytidyl transferase activity, template-dependent","type":"narrow"}],"termid":"GO:0017125","terms_by_termid":{"GO:0017125":null}}


id: PBO:0042697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin like elastase 3A","termid":"PBO:0042697"}


id: PBO:0071070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 72","termid":"PBO:0071070"}


id: _global:directly_negatively_regulates_activity_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"The entity A, immediately upstream of the entity B, has an activity that negatively regulates an activity performed by B. \\nFor example, A and B may be gene products and binding of B by A negatively regulates the kinase activity of B.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulates_activity_of","termid":"_global:directly_regulates_activity_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_negatively_regulates_activity_of","secondary_identifiers":["RO:0002449"],"synonyms":[{"name":"molecularly decreases activity of","type":"exact"}],"termid":"_global:directly_negatively_regulates_activity_of"}


id: PBO:0042951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 5","termid":"PBO:0042951"}


id: PBO:0034159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_chromosomal_homology_relationship_with","termid":"PBO:0034159"}


id: PBO:0079765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFM1 specific ligase 1","termid":"PBO:0079765"}


id: PBO:0087204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine decarboxylase; required for the biosynthesis of spermidine and spermine; cells lacking Spe2p require spermine or spermidine for growth in the presence of oxygen but not when grown anaerobically","termid":"PBO:0087204"}


id: PBO:0046841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 14","termid":"PBO:0046841"}


id: GO:1905050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metallopeptidase activity.","definition_xrefs":["PMID:26473732","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of metallopeptidase activity","termid":"GO:1905048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metallopeptidase activity","synonyms":[{"name":"activation of metallopeptidase activity","type":"narrow"},{"name":"activation of metalloprotease activity","type":"narrow"},{"name":"activation of metalloproteinase activity","type":"narrow"},{"name":"positive regulation of metalloprotease activity","type":"narrow"},{"name":"positive regulation of metalloproteinase activity","type":"narrow"},{"name":"up regulation of metallopeptidase activity","type":"exact"},{"name":"up regulation of metalloprotease activity","type":"narrow"},{"name":"up regulation of metalloproteinase activity","type":"narrow"},{"name":"up-regulation of metallopeptidase activity","type":"exact"},{"name":"up-regulation of metalloprotease activity","type":"narrow"},{"name":"up-regulation of metalloproteinase activity","type":"narrow"},{"name":"upregulation of metallopeptidase activity","type":"exact"},{"name":"upregulation of metalloprotease activity","type":"narrow"},{"name":"upregulation of metalloproteinase activity","type":"narrow"}],"termid":"GO:1905050"}


id: GO:0102327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a 3-oxoacyl-CoA = H+ + coenzyme A + a 3-oxoacid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxoacyl-CoA hydrolase activity (obsolete GO:0102327)","secondary_identifiers":["MetaCyc:RXN-13247"],"termid":"GO:0102327"}


id: PBO:0002776
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae VHT1","termid":"PBO:0002776"}


id: GO:0019608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.","definition_xrefs":["GOC:sm","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"nicotine metabolic process","termid":"GO:0018933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nicotine catabolic process","secondary_identifiers":["UM-BBD_pathwayID:nic","MetaCyc:P181-PWY"],"synonyms":[{"name":"nicotine breakdown","type":"exact"},{"name":"nicotine catabolism","type":"exact"},{"name":"nicotine degradation","type":"exact"}],"termid":"GO:0019608"}


id: PBO:0059699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 7","termid":"PBO:0059699"}


id: PBO:0069022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 267, pseudogene","termid":"PBO:0069022"}


id: PR:P27584
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpa1 gene.","definition_xrefs":["UniProtKB:P27584","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein alpha-1 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.06","synonyms":[{"name":"GP1-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpa1","type":"exact"}],"termid":"PR:P27584"}


id: MOD:00724
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom on a nitrogen of an L-histidine residue with one methyl group.","definition_xrefs":["OMSSA:74","Unimod:34#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated histidine","termid":"MOD:00661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated L-histidine","synonyms":[{"name":"Methyl","type":"related"},{"name":"NMeHis","type":"exact"},{"name":"methylh","type":"exact"}],"termid":"MOD:00724"}


id: PBO:0001914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class I) Hos2","termid":"PBO:0001914"}


id: PBO:0050441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein M pseudogene 2","termid":"PBO:0050441"}


id: GO:1900358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nigerotriose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of nigerotriose transport","termid":"GO:1900357"},{"relation_name":"negatively_regulates","term_name":"nigerotriose transport","termid":"GO:2001091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of nigerotriose transport","synonyms":[{"name":"down regulation of nigerotriose transport","type":"exact"},{"name":"down-regulation of nigerotriose transport","type":"exact"},{"name":"downregulation of nigerotriose transport","type":"exact"},{"name":"inhibition of nigerotriose transport","type":"narrow"}],"termid":"GO:1900358"}


id: PBO:0113068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (Translocase of Outer Membrane) complex; responsible for initial import of mitochondrially directed proteins; mediates interaction between TOM and TIM complexes and acts as receptor for precursor proteins; implicated in mitochondrial accumulation of amyloid beta peptides via direct interaction with amyloid beta peptide residues 25-42 followed by transfer to Tom40p and transport through the TOM channel","termid":"PBO:0113068"}


id: GO:1902367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Notch signaling pathway involved in somitogenesis.","definition_xrefs":["PMID:21795391","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Notch signaling pathway","termid":"GO:0045746"},{"relation_name":"is_a","term_name":"regulation of Notch signaling pathway involved in somitogenesis","termid":"GO:1902366"},{"relation_name":"negatively_regulates","term_name":"Notch signaling pathway involved in somitogenesis","termid":"GO:1902359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Notch signaling pathway involved in somitogenesis","synonyms":[{"name":"down regulation of N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of N signaling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of N signalling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch signaling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"down regulation of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down regulation of Notch-receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of N signaling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of N signalling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch signaling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"down-regulation of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"down-regulation of Notch-receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of N signaling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of N signalling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch signaling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"downregulation of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"downregulation of Notch-receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"inhibition of N signaling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of N signaling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of N signalling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of N signalling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch receptor signaling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch receptor signalling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch signaling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch signaling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch signalling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch signalling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch-receptor signaling pathway involved in somitogenesis","type":"narrow"},{"name":"inhibition of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"narrow"},{"name":"inhibition of Notch-receptor signalling pathway involved in somitogenesis","type":"narrow"},{"name":"negative regulation of N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of N signaling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of N signalling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"negative regulation of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"negative regulation of Notch-receptor signalling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:1902367"}


id: PR:Q9UT85
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 26 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR22838:SF0","OMA:SCHPO00669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C343.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.04c","secondary_identifiers":["UniProtKB:Q9UT85"],"synonyms":[{"name":"Spom972h-WDR26","type":"exact"}],"termid":"PR:Q9UT85"}


id: PBO:0045416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 5 pseudogene 1","termid":"PBO:0045416"}


id: GO:0048736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an appendage over time, from its formation to the mature structure. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appendage development","termid":"GO:0048736"}


id: PBO:0000592
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CDRE 5'-AGCCTC-3'","termid":"PBO:0000592"}


id: GO:1904820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a peritoneum over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000094","PMID:15840053","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serous membrane development","termid":"GO:1904817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peritoneum development","synonyms":[{"name":"peritonaeum development","type":"related"}],"termid":"GO:1904820"}


id: GO:0070685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection that forms at the site of macropinocytosis, a form of endocytosis that results in the uptake of relatively large amounts of extracellular fluid. The macropinocytic cup membrane selectively excludes certain proteins, such as H36 or PM4C4 in Dictyostelium, and the underlying cytoskeleton is enriched in F-actin and coronin.","definition_xrefs":["PMID:9044041","PMID:16968738","PMID:12538772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"macropinocytic cup","synonyms":[{"name":"crown","type":"exact"}],"termid":"GO:0070685"}


id: PBO:0084219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase); dimeric enzyme that catalyzes the third step in the common pathway for methionine and threonine biosynthesis; enzyme has nucleotide-binding, dimerization and catalytic regions","termid":"PBO:0084219"}


id: PBO:0089909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3d","termid":"PBO:0089909"}


id: PATO:0001075
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001075 absolute momentum (obsolete PATO:0001075)","termid":"PATO:0001075"}


id: PBO:0081118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 6 pseudogene 1","termid":"PBO:0081118"}


id: PBO:0068540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 143, pseudogene","termid":"PBO:0068540"}


id: PBO:0063057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN3 antisense RNA 1","termid":"PBO:0063057"}


id: PBO:0067128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 174, pseudogene","termid":"PBO:0067128"}


id: GO:0033826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-glucosyl residue from UDP-glucose on to a glucose residue in xyloglucan, forming a beta-1,4-D-glucosyl-D-glucose linkage.","definition_xrefs":["EC:2.4.1.168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"xyloglucan 4-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12419"],"synonyms":[{"name":"UDP-glucose:xyloglucan 1,4-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:xyloglucan 1,4-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-xyloglucan 4beta-glucosyltransferase activity","type":"related"},{"name":"xyloglucan 4beta-D-glucosyltransferase activity","type":"related"},{"name":"xyloglucan glucosyltransferase activity","type":"related"}],"termid":"GO:0033826"}


id: GO:0032546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a deoxyribonucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked to deoxyribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside binding","termid":"GO:0001882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"deoxyribonucleoside binding","termid":"GO:0032546"}


id: PBO:0051270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 1","termid":"PBO:0051270"}


id: PBO:0082386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 6 subunit of the 20S proteasome","termid":"PBO:0082386"}


id: PBO:0066790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 89","termid":"PBO:0066790"}


id: PBO:0087705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; component of the Middle domain of mediator; required for regulation of RNA polymerase II activity; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087705"}


id: PBO:0071570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 36","termid":"PBO:0071570"}


id: GO:0035298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that a Malpighian tubule is the correct length and diameter.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tube size","termid":"GO:0035150"},{"relation_name":"part_of","term_name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Malpighian tubule size","termid":"GO:0035298"}


id: GO:0098733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any protein complex that is part of or has some part in a hemidesmosome.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"hemidesmosome associated protein complex","termid":"GO:0098733"}


id: GO:0048458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the floral whorl. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["PO:0025023","GOC:PO_curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"floral whorl morphogenesis","termid":"GO:0048457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral whorl formation","secondary_identifiers":["GO:0048415"],"termid":"GO:0048458"}


id: PBO:0048507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 7","termid":"PBO:0048507"}


id: PBO:0027083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphatase_activity_during_cellular_response_to_adenine_starvation","termid":"PBO:0027083"}


id: GO:0020013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont organism modulates the frequency, rate or extent of erythrocyte aggregation in its host organism, e.g. the binding of parasite-infected erythrocytes to uninfected erythrocytes.","definition_xrefs":["GOC:add","GOC:dgh","GOC:mb","GOC:pr","PMID:19467172","PMID:21305024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"erythrocyte aggregation","termid":"GO:0034117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"modulation by symbiont of host erythrocyte aggregation","secondary_identifiers":["Wikipedia:Rosetting"],"synonyms":[{"name":"rosetting","type":"exact"}],"termid":"GO:0020013"}


id: PBO:0079322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 12","termid":"PBO:0079322"}


id: GO:0061883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A clathrin-mediated endocytosis process whereby yolk proteins are internalized and trafficked through the endocytic pathway for yolk deposition.","definition_xrefs":["PMID:26265702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"},{"relation_name":"part_of","term_name":"vitellogenesis","termid":"GO:0007296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"clathrin-dependent endocytosis involved in vitellogenesis","synonyms":[{"name":"clathrin-dependent endocytosis involved in yolk formation","type":"exact"}],"termid":"GO:0061883"}


id: PBO:0083090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA binding transcriptional activator; mediates serine/threonine activation of the catabolic L-serine (L-threonine) deaminase (CHA1); Zinc-finger protein with Zn[2]-Cys[6] fungal-type binuclear cluster domain","termid":"PBO:0083090"}


id: PBO:0052939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 23-1","termid":"PBO:0052939"}


id: PBO:0085889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in nuclear processes of the Ran-GTPase cycle; involved in nuclear protein export; contains Ran Binding Domain and FxFG repeats; interacts with Srm1p, GTP-Gsp1p, Rna1p and Crm1p; relocalizes to the cytosol in response to hypoxia; not essential for viability","termid":"PBO:0085889"}


id: GO:0005824
data:
  {"annotated_genes":["SJAG_02737","SJAG_01215","SJAG_01188","SJAG_01464"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113024,104938,111549,103185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061499"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the spindle pole body; the outer plaque is in the cytoplasm.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01188":null,"SJAG_01215":null,"SJAG_01464":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0005816","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"outer plaque of spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005824","terms_by_termid":{"GO:0061499":null}}


id: FYPO:0005042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromere","termid":"FYPO:0007853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to kinetochore","synonyms":[{"name":"normal protein localisation to kinetochore","type":"exact"}],"termid":"FYPO:0005042"}


id: PBO:0026766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ferric-chelate_reductase_activity","termid":"PBO:0026766"}


id: GO:0048562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic organ morphogenesis","termid":"GO:0048562"}


id: GO:0044656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the volume of a post-lysosomal vacuole, a membrane-bounded intracellular vesicle formed late in the endocytic pathway when the pH in the vacuole becomes neutral prior to exocytosis.","definition_xrefs":["PMID:22008230","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle size","termid":"GO:0097494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of post-lysosomal vacuole size","synonyms":[{"name":"regulation of post-lysosome size","type":"exact"},{"name":"regulation of postlysosomal vacuole size","type":"exact"},{"name":"regulation of postlysosome vacuole size","type":"exact"}],"termid":"GO:0044656"}


id: PBO:0050783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 2A","termid":"PBO:0050783"}


id: PBO:0089241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human coilin ortholog Mug174","termid":"PBO:0089241"}


id: GO:0009915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of loading sucrose into the sieve tube or companion cell of the phloem for long distance transport from source to sink.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose transport","termid":"GO:0015770"},{"relation_name":"is_a","term_name":"phloem loading","termid":"GO:0110126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"phloem sucrose loading","termid":"GO:0009915"}


id: PBO:0053308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIN28B antisense RNA 1","termid":"PBO:0053308"}


id: GO:0030484
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The contractile fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete muscle fiber (obsolete GO:0030484)","synonyms":[{"name":"muscle fiber","type":"exact"},{"name":"muscle fibre","type":"exact"}],"termid":"GO:0030484"}


id: GO:0010516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a cellular response to nitrogen starvation.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"negatively_regulates","term_name":"cellular response to nitrogen starvation","termid":"GO:0006995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to nitrogen starvation","termid":"GO:0010516"}


id: GO:1902840
data:
  {"annotated_genes":["SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nuclear migration along microtubule.","definition_xrefs":["GO_REF:0000058","PMID:23087209","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of nuclear migration along microtubule","termid":"GO:1902838"},{"relation_name":"positively_regulates","term_name":"nuclear migration along microtubule","termid":"GO:0030473"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nuclear migration along microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of microtubule cytoskeleton-dependent nuclear positioning","type":"narrow"},{"name":"activation of microtubule cytoskeleton-dependent nucleus positioning","type":"narrow"},{"name":"activation of microtubule-dependent nuclear positioning","type":"narrow"},{"name":"activation of microtubule-dependent nucleus positioning","type":"narrow"},{"name":"activation of microtubule-mediated nuclear migration","type":"narrow"},{"name":"activation of nuclear migration along microtubule","type":"narrow"},{"name":"activation of nuclear migration, microtubule-mediated","type":"narrow"},{"name":"activation of transport of nucleus by microtubules","type":"narrow"},{"name":"activation of transport of nucleus, microtubule-mediated","type":"narrow"},{"name":"positive regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"positive regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"positive regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"positive regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"positive regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"positive regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"positive regulation of transport of nucleus by microtubules","type":"exact"},{"name":"positive regulation of transport of nucleus, microtubule-mediated","type":"exact"},{"name":"up regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"up regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"up regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"up regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"up regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"up regulation of nuclear migration along microtubule","type":"exact"},{"name":"up regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"up regulation of transport of nucleus by microtubules","type":"exact"},{"name":"up regulation of transport of nucleus, microtubule-mediated","type":"exact"},{"name":"up-regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"up-regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"up-regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"up-regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"up-regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"up-regulation of nuclear migration along microtubule","type":"exact"},{"name":"up-regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"up-regulation of transport of nucleus by microtubules","type":"exact"},{"name":"up-regulation of transport of nucleus, microtubule-mediated","type":"exact"},{"name":"upregulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"upregulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"upregulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"upregulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"upregulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"upregulation of nuclear migration along microtubule","type":"exact"},{"name":"upregulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"upregulation of transport of nucleus by microtubules","type":"exact"},{"name":"upregulation of transport of nucleus, microtubule-mediated","type":"exact"}],"termid":"GO:1902840","terms_by_termid":{"GO:1902854":null}}


id: PBO:0079548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 1","termid":"PBO:0079548"}


id: PBO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses fip1","termid":"PBO:0000366"}


id: PBO:0083473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene RPM1","termid":"PBO:0083473"}


id: PBO:0069062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 309, pseudogene","termid":"PBO:0069062"}


id: FYPO:0006170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to copper ion starvation is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah","PMID:24569997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to copper ion starvation","termid":"FYPO:0006209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion starvation during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion starvation during meiotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper starvation during meiotic cell cycle","type":"exact"},{"name":"decreased RNA level during meiotic cell cycle during copper starvation","type":"related"},{"name":"decreased transcript level during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006170"}


id: PBO:0084704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial GTP/GDP transporter; essential for mitochondrial genome maintenance; has a role in mitochondrial iron transport; member of the mitochondrial carrier family","termid":"PBO:0084704"}


id: PBO:0034514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cleavage_furrow_rim","termid":"PBO:0034514"}


id: SO:0002030
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One of two segments of homology found at all three mating loci (HML, MAT and HMR).","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X_region","synonyms":[{"name":"x-region","type":"exact"}],"termid":"SO:0002030"}


id: PBO:0040802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member e40","termid":"PBO:0040802"}


id: MOD:00091
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to L-arginine amide.","definition_xrefs":["RESID:AA0082","PubMed:743209","PubMed:2753890","ChEBI:145897","PubMed:2229025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-arginine amide","synonyms":[{"name":"(2S)-2-amino-5-[(diaminomethylidene)amino]pentanamide","type":"exact"},{"name":"2-amino-5-carbamimidamidopentanamide","type":"exact"},{"name":"2-amino-5-guanidinopentanamide","type":"exact"},{"name":"ArgN","type":"exact"},{"name":"L-arginine amide","type":"exact"},{"name":"MOD_RES Arginine amide","type":"exact"},{"name":"amidated L-arginine","type":"exact"},{"name":"argininamide","type":"exact"}],"termid":"MOD:00091"}


id: PBO:0029507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_spore_with_abnormal_shape","termid":"PBO:0029507"}


id: GO:1990539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fructose substance from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:10735857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transport","termid":"GO:0015755"},{"relation_name":"is_a","term_name":"hexose import across plasma membrane","termid":"GO:0140271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"fructose import across plasma membrane","secondary_identifiers":["GO:0032445"],"synonyms":[{"name":"fructose import","type":"related"},{"name":"fructose uptake","type":"exact"}],"termid":"GO:1990539"}


id: FYPO:0009062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to X-rays.","direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to ionizing radiation during vegetative growth","termid":"FYPO:0002312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to X-rays during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth during cellular response to X rays","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to X-rays","type":"exact"},{"name":"resistant to X rays during vegetative growth","type":"exact"},{"name":"resistant to X-rays during vegetative growth","type":"exact"}],"termid":"FYPO:0009062"}


id: PBO:0060833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 E3 ubiquitin protein ligase","termid":"PBO:0060833"}


id: PBO:0000319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-ribosomal protein Loc1 (predicted)","termid":"PBO:0000319"}


id: GO:0099161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of presynaptic dense core granule exocytosis.","definition_xrefs":["GOC:dos","PMID:17881523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic modulation of chemical synaptic transmission","termid":"GO:0099171"},{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis of neurotransmitter","termid":"GO:1903233"},{"relation_name":"is_a","term_name":"regulation of dense core granule exocytosis","termid":"GO:1905413"},{"relation_name":"regulates","term_name":"presynaptic dense core vesicle exocytosis","termid":"GO:0099525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of presynaptic dense core granule exocytosis","synonyms":[{"name":"regulation of presynaptic dense core vesicle exocytosis","type":"exact"}],"termid":"GO:0099161"}


id: PR:O59710
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADPH:adrenodoxin oxidoreductase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11938:SF4","OMA:SCHPO03689","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH:adrenodoxin oxidoreductase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.01c","secondary_identifiers":["UniProtKB:O59710"],"synonyms":[{"name":"AR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FDXR","type":"exact"},{"name":"adrenodoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ferredoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ferredoxin--NADP(+) reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59710"}


id: GO:0004917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-7 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-7 receptor activity","synonyms":[{"name":"IL-7 receptor activity","type":"exact"},{"name":"IL-7R","type":"exact"}],"termid":"GO:0004917"}


id: GO:0035900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lack of contact with other members of the same species.","definition_xrefs":["GOC:bf","PMID:20203532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isolation stress","synonyms":[{"name":"response to social isolation","type":"exact"}],"termid":"GO:0035900"}


id: PBO:0046626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 7","termid":"PBO:0046626"}


id: GO:0015633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Zn2+(out) = ADP + phosphate + Zn2+(in).","definition_xrefs":["RHEA:29795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type zinc transporter activity","secondary_identifiers":["MetaCyc:ABC-63-RXN","EC:7.2.2.20"],"synonyms":[{"name":"ATP-dependent zinc transmembrane transporter activity","type":"broad"},{"name":"ATPase-coupled zinc transmembrane transporter activity","type":"broad"},{"name":"zinc porter activity","type":"related"},{"name":"zinc transporting ATPase activity","type":"broad"},{"name":"zinc-transporting ATPase activity","type":"broad"}],"termid":"GO:0015633"}


id: FYPO:0005788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which gene conversion occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000293"],"is_obsolete":false,"name":"increased gene conversion during vegetative growth","synonyms":[{"name":"increased gene conversion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005788"}


id: FYECO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which caspofungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers at lethal dose for the assayed cell density.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ caspofungin SLD","termid":"FYECO:0000393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ caspofungin LD","termid":"FYECO:0000394"}


id: GO:0102641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-propane-1,2-diol + NADP = (R)-lactaldehyde + NADPH + H+.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(R)-lactaldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-15743"],"termid":"GO:0102641"}


id: GO:0015562
data:
  {"annotated_genes":["SJAG_03899","SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080139"},{"annotations":[92134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a specific substance or related group of substances from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01183":null,"SJAG_03899":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"efflux transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"efflux permease activity","type":"exact"},{"name":"efflux transporter activity","type":"exact"},{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0015562","terms_by_termid":{"GO:0034639":null,"GO:0080139":null}}


id: GO:0044629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of complement activation by the classical pathway, in a different organism.","definition_xrefs":["PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of complement activation, classical pathway in another organism (obsolete GO:0044629)","synonyms":[{"name":"negative regulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044629"}


id: PBO:0061447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 3 group C member 1 pseudogene 1","termid":"PBO:0061447"}


id: GO:1905372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ceramide phosphoethanolamine.","definition_xrefs":["PMID:25667419","GO_REF:0000068","GOC:hjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"},{"relation_name":"is_a","term_name":"ceramide phosphoethanolamine metabolic process","termid":"GO:1905371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"ceramide phosphoethanolamine catabolic process","synonyms":[{"name":"ceramide phosphoethanolamine breakdown","type":"exact"},{"name":"ceramide phosphoethanolamine catabolism","type":"exact"},{"name":"ceramide phosphoethanolamine degradation","type":"exact"}],"termid":"GO:1905372"}


id: GO:0090559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by a membrane.","definition_xrefs":["GOC:kmv","PMID:22677064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane permeability","termid":"GO:0090559"}


id: FYPO:0006805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a galactosyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal galactosyltransferase activity","termid":"FYPO:0006805"}


id: PBO:0055240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2667","termid":"PBO:0055240"}


id: PBO:0083404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YBR126W-A; identified by SAGE","termid":"PBO:0083404"}


id: GO:0004564
data:
  {"annotated_genes":["SJAG_04301"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112214],"is_not":false,"summary":null,"term":"GO:0004564"},{"annotations":[112215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004575"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a fructofuranosylated fructofuranosyl acceptor + H2O = a non fructofuranosylated fructofuranosyl acceptor + a beta-D-fructofuranoside.","definition_xrefs":["MetaCyc:RXN-9985","EC:3.2.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-fructofuranosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acid invertase activity","type":"broad"},{"name":"alkaline invertase activity","type":"broad"},{"name":"beta-D-fructofuranoside fructohydrolase activity","type":"exact"},{"name":"beta-fructosidase activity","type":"related"},{"name":"beta-h-fructosidase activity","type":"related"},{"name":"fructosylinvertase activity","type":"related"},{"name":"glucosucrase activity","type":"related"},{"name":"invertase activity","type":"broad"},{"name":"invertin activity","type":"broad"},{"name":"maxinvert L 1000 activity","type":"related"},{"name":"saccharase activity","type":"related"}],"termid":"GO:0004564","terms_by_termid":{"GO:0004564":null,"GO:0004575":null}}


id: PBO:0053630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 676","termid":"PBO:0053630"}


id: PBO:0032764
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression of exogenous PCNA-binding peptide fused to EGFP causes phenotype of inviable elongated mononucleate cells","termid":"PBO:0032764"}


id: GO:0141151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of nitric oxide-cGMP mediated signal transduction.","definition_xrefs":["PMID:35931019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nitric oxide mediated signal transduction","termid":"GO:0010751"},{"relation_name":"is_a","term_name":"negative regulation of cGMP-mediated signaling","termid":"GO:0010754"},{"relation_name":"is_a","term_name":"regulation of nitric oxide-cGMP mediated signal transduction","termid":"GO:0141149"},{"relation_name":"negatively_regulates","term_name":"nitric oxide-cGMP-mediated signaling","termid":"GO:0038060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of nitric oxide-cGMP mediated signal transduction","termid":"GO:0141151"}


id: PBO:0082142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of G1-specific transcription factors MBF and SBF; involved in regulation of the timing of G1-specific gene transcription and cell cycle initiation; localization is cell-cycle dependent and regulated by Cdc28p phosphorylation; MSA1 has a paralog, MSA2, that arose from the whole genome duplication","termid":"PBO:0082142"}


id: PBO:0039864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP26 intronic transcript 1","termid":"PBO:0039864"}


id: PBO:0046455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 like 3","termid":"PBO:0046455"}


id: PBO:0113529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar carboxypeptidase Y (proteinase C, CPY); broad-specificity C-terminal exopeptidase involved in non-specific protein degradation in vacuole; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway; member of serine carboxypeptidase family; N-glycosylated","termid":"PBO:0113529"}


id: GO:0180008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat--phospho-L-serine (consensus YSPTSPS)(position 7) + H2O = RNA polymerase II large subunit + phosphate.","definition_xrefs":["PMID:22622228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat phosphatase activity","termid":"GO:0008420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0140096","GO:0004721","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain S7 phosphatase activity","type":"exact"}],"termid":"GO:0180008"}


id: PBO:0073730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLBP divergent transcript","termid":"PBO:0073730"}


id: PBO:0061728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 2","termid":"PBO:0061728"}


id: GO:0005733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nucleolar RNA (obsolete GO:0005733)","synonyms":[{"name":"small nucleolar RNA","type":"exact"},{"name":"snoRNA","type":"exact"}],"termid":"GO:0005733"}


id: PBO:0070648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 19","termid":"PBO:0070648"}


id: PBO:0111528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 8","termid":"PBO:0111528"}


id: PBO:0042327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD47 molecule","termid":"PBO:0042327"}


id: PR:O42832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent rRNA methyltransferase spb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.11","secondary_identifiers":["UniProtKB:O42832"],"synonyms":[{"name":"2'-O-ribose RNA methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-adenosyl-L-methionine-dependent methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ3","type":"exact"}],"termid":"PR:O42832"}


id: PBO:0040230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4 pseudogene 2","termid":"PBO:0040230"}


id: PBO:0056084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY75-CD302 readthrough","termid":"PBO:0056084"}


id: GO:0043011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin.","definition_xrefs":["CL:0000782","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell activation","termid":"GO:0001773"},{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"},{"relation_name":"is_a","term_name":"dendritic cell differentiation","termid":"GO:0097028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell differentiation","secondary_identifiers":["Wikipedia:Dendritic_cell"],"termid":"GO:0043011"}


id: FYPO:0002326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a sterol measured in a cell is lower than normal. A sterol is any natural product derived from the steroid skeleton and containing a hydroxy group in the 3 position, closely related to cholestan-3-ol.","definition_xrefs":["PomBase:mah","CHEBI:15889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered cellular sterol level","termid":"FYPO:0002325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular sterol level","synonyms":[{"name":"decreased cellular sterol level during mitotic cell cycle","type":"related"},{"name":"decreased cellular sterol level during vegetative growth","type":"exact"},{"name":"decreased sterol level","type":"exact"},{"name":"reduced cellular sterol level","type":"exact"}],"termid":"FYPO:0002326"}


id: PBO:0051442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-27","termid":"PBO:0051442"}


id: PBO:0046098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 1","termid":"PBO:0046098"}


id: PBO:0091139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein","termid":"PBO:0091139"}


id: FYPO:0006635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to cell tip during mitotic interphase","synonyms":[{"name":"normal protein localisation to cell tip during mitotic interphase","type":"exact"},{"name":"normal protein localization to cell end during mitotic interphase","type":"exact"},{"name":"normal protein localization to cell tip during interphase during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell tip during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0006635"}


id: FYPO:0003798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis","termid":"FYPO:0000478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiosis II","synonyms":[{"name":"normal second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003798"}


id: PBO:0031440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_cytoplasm_during_vegetative_growth","termid":"PBO:0031440"}


id: PBO:0080457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 2B","termid":"PBO:0080457"}


id: FYPO:0001043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is higher than normal.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased mating efficiency","synonyms":[{"name":"mating efficiency: increased","type":"related"}],"termid":"FYPO:0001043"}


id: GO:0019761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside biosynthetic process","termid":"GO:0016144"},{"relation_name":"is_a","term_name":"glucosinolate metabolic process","termid":"GO:0019760"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glucosinolate biosynthetic process","synonyms":[{"name":"glucosinolate anabolism","type":"exact"},{"name":"glucosinolate biosynthesis","type":"exact"},{"name":"glucosinolate formation","type":"exact"},{"name":"glucosinolate synthesis","type":"exact"}],"termid":"GO:0019761"}


id: PBO:0067992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 294","termid":"PBO:0067992"}


id: GO:0018819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lactoyl-CoA = acryloyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.54","RHEA:34691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lactoyl-CoA dehydratase activity","secondary_identifiers":["MetaCyc:LACTOYL-COA-DEHYDRATASE-RXN","UM-BBD_reactionID:r0086","MetaCyc:RXN-781"],"synonyms":[{"name":"acrylyl coenzyme A hydratase activity","type":"related"},{"name":"lactoyl coenzyme A dehydratase activity","type":"related"},{"name":"lactoyl-CoA hydro-lyase (acryloyl-CoA-forming)","type":"related"},{"name":"lactoyl-CoA hydro-lyase activity","type":"related"},{"name":"lactyl CoA dehydratase activity","type":"related"},{"name":"lactyl-coenzyme A dehydrase activity","type":"related"}],"termid":"GO:0018819"}


id: PBO:0089147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L17","termid":"PBO:0089147"}


id: GO:0080107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-methylthiopropyl-glucosinolate = 8-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"8-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080107"}


id: GO:1900930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-tyrosine import into the cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-tyrosine import across plasma membrane","termid":"GO:1900929"},{"relation_name":"negatively_regulates","term_name":"L-tyrosine import across plasma membrane","termid":"GO:1903808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of L-tyrosine import across plasma membrane","synonyms":[{"name":"down regulation of L-tyrosine import","type":"exact"},{"name":"down regulation of L-tyrosine uptake","type":"related"},{"name":"down-regulation of L-tyrosine import","type":"exact"},{"name":"down-regulation of L-tyrosine uptake","type":"related"},{"name":"downregulation of L-tyrosine import","type":"exact"},{"name":"downregulation of L-tyrosine uptake","type":"related"},{"name":"inhibition of L-tyrosine import","type":"narrow"},{"name":"inhibition of L-tyrosine uptake","type":"related"},{"name":"negative regulation of L-tyrosine import","type":"broad"},{"name":"negative regulation of L-tyrosine uptake","type":"related"}],"termid":"GO:1900930"}


id: PBO:0062629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 6","termid":"PBO:0062629"}


id: PBO:0042647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 22 pseudogene","termid":"PBO:0042647"}


id: GO:0032506
data:
  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cellular process that is involved in cytokinesis (the division of the cytoplasm of a cell and its separation into two daughter cells).","definition_xrefs":["GOC:mah","GOC:isa_complete","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle 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process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null},"termid":"GO:0032506","terms_by_termid":{"GO:0000915":null,"GO:0000917":null,"GO:0010974":null,"GO:0031030":null,"GO:0031031":null,"GO:0031671":null,"GO:0031991":null,"GO:0032955":null,"GO:0061796":null,"GO:0071520":null,"GO:0120306":null,"GO:0140278":null,"GO:0140279":null,"GO:0140281":null,"GO:1902404":null,"GO:1902408":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null,"GO:1990344":null}}


id: PBO:0054196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1571","termid":"PBO:0054196"}


id: GO:0006533
data:
  {"annotated_genes":["SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107906],"is_not":false,"summary":null,"term":"GO:0006533"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate metabolic process","termid":"GO:0006531"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"aspartate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aspartate breakdown","type":"exact"},{"name":"aspartate catabolism","type":"exact"},{"name":"aspartate degradation","type":"exact"}],"termid":"GO:0006533","terms_by_termid":{"GO:0006533":null}}


id: GO:2000272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a signaling receptor activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of signaling receptor activity","synonyms":[{"name":"negative regulation of receptor activity","type":"broad"},{"name":"negative regulation of signalling receptor activity","type":"exact"}],"termid":"GO:2000272"}


id: GO:0032207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a recombinational process involved in the maintenance of proper telomeric length.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic recombination","termid":"GO:0000019"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at telomere","termid":"GO:0072695"},{"relation_name":"regulates","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"regulation of telomere maintenance via recombination","termid":"GO:0032207"}


id: PBO:0053134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain binding 1","termid":"PBO:0053134"}


id: RO:HOM0000008
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homology that is defined by sharing of a set of developmental constraints, caused by locally acting self-regulatory mechanisms of differentiation, between individualized parts of the phenotype.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homology_relationship_with","termid":"RO:HOM0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_biological_homology_relationship_with","synonyms":[{"name":"biological homologous to","type":"exact"},{"name":"transformational homology","type":"related"}],"termid":"RO:HOM0000008"}


id: PBO:0083071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroxyacetone kinase; required for detoxification of dihydroxyacetone (DHA); involved in stress adaptation","termid":"PBO:0083071"}


id: GO:0071692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported from one specific location in the extracellular region to another, or maintained in a specific extracellular location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to extracellular region","synonyms":[{"name":"protein localisation in extracellular region","type":"exact"},{"name":"protein localization in extracellular region","type":"exact"}],"termid":"GO:0071692"}


id: PBO:0081889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 839 pseudogene 1","termid":"PBO:0081889"}


id: PBO:0089448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose dehydrogenase Gcd1","termid":"PBO:0089448"}


id: GO:0102342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxycerotoyl-CoA + NADP = 3-oxohexacosanoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-cerotoyl-CoA reductase activity (obsolete GO:0102342)","termid":"GO:0102342"}


id: PBO:0065603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTOV1 antisense RNA 1","termid":"PBO:0065603"}


id: PBO:0083193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene BUD5/YCR038C; identified by homology with hemiascomycetous yeast species","termid":"PBO:0083193"}


id: PBO:0064955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 7","termid":"PBO:0064955"}


id: GO:0018596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dimethylsilanediol + O2 + 2 H+ + 2 e- = H2O + hydroxymethylmethylsilanediol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylsilanediol hydroxylase activity (obsolete GO:0018596)","synonyms":[{"name":"DMSD hydroxylase activity","type":"exact"}],"termid":"GO:0018596"}


id: PBO:0061073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NF-kappaB interacting lncRNA","termid":"PBO:0061073"}


id: FYPO:0008264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a protein kinase activity is absent during a cellular response to  oxidative stress.","definition_xrefs":["PMID:24498240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein kinase activity","termid":"FYPO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein kinase activity in response to oxidative stress","termid":"FYPO:0008264"}


id: GO:0004065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phenol sulfate + H2O = a phenol + sulfate.","definition_xrefs":["EC:3.1.6.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"arylsulfatase activity","secondary_identifiers":["MetaCyc:ARYLSULFAT-RXN","RHEA:17261"],"synonyms":[{"name":"4-methylumbelliferyl sulfatase activity","type":"related"},{"name":"aryl-sulfate sulfohydrolase activity","type":"related"},{"name":"aryl-sulfate sulphohydrolase activity","type":"related"},{"name":"aryl-sulphate sulphohydrolase activity","type":"related"},{"name":"arylsulfohydrolase activity","type":"related"},{"name":"arylsulphatase activity","type":"exact"},{"name":"estrogen sulfatase activity","type":"related"},{"name":"nitrocatechol sulfatase activity","type":"related"},{"name":"p-nitrophenyl sulfatase activity","type":"related"},{"name":"phenolsulfatase activity","type":"related"},{"name":"phenylsulfatase activity","type":"related"},{"name":"sulfatase activity","type":"related"}],"termid":"GO:0004065"}


id: GO:0045901
data:
  {"annotated_genes":["SJAG_02189","SJAG_02812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65754,67470],"is_not":false,"summary":null,"term":"GO:0045901"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translational elongation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational elongation","termid":"GO:0006448"},{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"positively_regulates","term_name":"translational elongation","termid":"GO:0006414"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02189":null,"SJAG_02812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translational elongation","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"activation of translational elongation","type":"narrow"},{"name":"stimulation of translational elongation","type":"narrow"},{"name":"up regulation of translational elongation","type":"exact"},{"name":"up-regulation of translational elongation","type":"exact"},{"name":"upregulation of translational elongation","type":"exact"}],"termid":"GO:0045901","terms_by_termid":{"GO:0045901":null}}


id: GO:0043871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: delta1-piperideine-6-carboxylate + NAD+ + 2 H2O = 2-aminoadipate + NADH + H+. Delta1-piperideine-6-carboxylate is also known as 2,3,4,5-tetrahydropyridine-2-carboxylate.","definition_xrefs":["PMID:16237033","MetaCyc:RXN-8162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"delta1-piperideine-6-carboxylate dehydrogenase activity","secondary_identifiers":["RHEA:49476"],"synonyms":[{"name":"AmaB","type":"related"},{"name":"PIPOX","type":"related"}],"termid":"GO:0043871"}


id: PBO:0043841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide-1-phosphate transfer protein","termid":"PBO:0043841"}


id: GO:2000539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein geranylgeranylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein geranylgeranylation","termid":"GO:0018344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein geranylgeranylation","synonyms":[{"name":"regulation of C-terminal protein geranylgeranylation","type":"related"},{"name":"regulation of protein amino acid geranylgeranylation","type":"exact"}],"termid":"GO:2000539"}


id: PBO:0061684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP133 divergent transcript","termid":"PBO:0061684"}


id: PBO:0048861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 6","termid":"PBO:0048861"}


id: PBO:0053707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 910","termid":"PBO:0053707"}


id: GO:0060198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle","termid":"GO:0030136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"clathrin-sculpted vesicle","synonyms":[{"name":"clathrin sculpted vesicle","type":"exact"}],"termid":"GO:0060198"}


id: PBO:0055640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3079","termid":"PBO:0055640"}


id: GO:0072218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric ascending thin limb over time, from its formation to the mature structure. The metanephric ascending thin limb is a segment of a nephron tubule in the metanephros lying in the inner medulla that is permeable to ions but not to water and has a simple epithelium; active transepithelial solute transport is absent.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ascending thin limb development","termid":"GO:0072021"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric loop of Henle development","termid":"GO:0072236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric ascending thin limb development","termid":"GO:0072218"}


id: GO:0047948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + glutarate = ADP + glutaryl-CoA + H+ + phosphate.","definition_xrefs":["RHEA:14169","EC:6.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"glutarate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R02402","MetaCyc:GLUTARATE--COA-LIGASE-RXN"],"synonyms":[{"name":"glutarate:CoA ligase (ADP-forming)","type":"related"},{"name":"glutaryl coenzyme A synthetase activity","type":"related"},{"name":"glutaryl-CoA synthetase activity","type":"related"}],"termid":"GO:0047948"}


id: GO:0006089
data:
  {"annotated_genes":["SJAG_04726","SJAG_02988","SJAG_03804","SJAG_01596","SJAG_02960","SJAG_02106","SJAG_04674","SJAG_04404"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58845,61987,59837,60521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019249"},{"annotations":[107859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903457"},{"annotations":[96424,84109,108904,98895,88539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[101123,58846,60522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactate, the anion of lactic acid.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_03804":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lactate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"2-hydroxypropanoate metabolic process","type":"exact"},{"name":"2-hydroxypropanoate metabolism","type":"exact"},{"name":"alpha-hydroxypropionate metabolic process","type":"exact"},{"name":"alpha-hydroxypropionate metabolism","type":"exact"},{"name":"lactate metabolism","type":"exact"}],"termid":"GO:0006089","terms_by_termid":{"GO:0019243":null,"GO:0019249":null,"GO:0061727":null,"GO:1903457":null}}


id: PBO:0085852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO); YOR305W is not an essential gene","termid":"PBO:0085852"}


id: PBO:0108958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_insertion_and_mutation","termid":"PBO:0108958"}


id: GO:0043674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A rod-like element of the sexine and ectexine, supporting either the tectum (the layer of sexine which forms a roof over the columella), or supporting a caput (an architectural element on top of a columella).","direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sexine","termid":"GO:0043673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"columella","synonyms":[{"name":"sexine 1","type":"exact"}],"termid":"GO:0043674"}


id: GO:0060848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in cell fate commitment of an endothelial cell. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"endothelial cell fate commitment","termid":"GO:0060839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell fate determination","termid":"GO:0060848"}


id: GO:0032753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-4 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-4 production","termid":"GO:0032673"},{"relation_name":"positively_regulates","term_name":"interleukin-4 production","termid":"GO:0032633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-4 production","secondary_identifiers":["GO:0150135","GO:0045404"],"synonyms":[{"name":"positive regulation of interleukin-4 biosynthetic process","type":"narrow"},{"name":"activation of interleukin-4 production","type":"narrow"},{"name":"positive regulation of IL-4 production","type":"exact"},{"name":"positive regulation of interleukin-4 secretion","type":"narrow"},{"name":"stimulation of interleukin-4 production","type":"narrow"},{"name":"up regulation of interleukin-4 production","type":"exact"},{"name":"up-regulation of interleukin-4 production","type":"exact"},{"name":"upregulation of interleukin-4 production","type":"exact"}],"termid":"GO:0032753"}


id: PBO:0085400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein involved in maintaining membrane organization; involved in maintaining organization during stress conditions; induced by heat shock, oxidative stress, osmostress, stationary phase, glucose depletion, oleate and alcohol; protein abundance increased in response to DNA replication stress and dietary restriction; regulated by the HOG and Ras-Pka pathways; required for dietary restriction-induced lifespan extension","termid":"PBO:0085400"}


id: FYPO:0005507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature ribosomal RNA (rRNA) measured in a cell is higher than normal. Total rRNA or a specific rRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature rRNA level during vegetative growth","termid":"FYPO:0006468"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased mature rRNA level","synonyms":[{"name":"increased mature rRNA accumulation","type":"related"},{"name":"increased mature rRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature rRNA level during vegetative growth","type":"exact"},{"name":"increased mature rRNA transcript level","type":"broad"},{"name":"increased mature ribosomal RNA level","type":"exact"},{"name":"increased rRNA level","type":"broad"}],"termid":"FYPO:0005507"}


id: PBO:0078652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 5-1","termid":"PBO:0078652"}


id: PBO:0109616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 16, pseudogene","termid":"PBO:0109616"}


id: GO:0070164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of adiponectin from a cell.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of adiponectin secretion","termid":"GO:0070163"},{"relation_name":"negatively_regulates","term_name":"adiponectin secretion","termid":"GO:0070162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of adiponectin secretion","synonyms":[{"name":"down regulation of adiponectin secretion","type":"exact"},{"name":"down-regulation of adiponectin secretion","type":"exact"},{"name":"downregulation of adiponectin secretion","type":"exact"},{"name":"inhibition of adiponectin secretion","type":"narrow"}],"termid":"GO:0070164"}


id: GO:0019869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a chloride channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel inhibitor activity","termid":"GO:0008200"},{"relation_name":"is_a","term_name":"chloride channel regulator activity","termid":"GO:0017081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"chloride channel inhibitor activity","termid":"GO:0019869"}


id: PBO:0081721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF649 antisense RNA 1","termid":"PBO:0081721"}


id: GO:1903970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to macrophage colony-stimulating factor.","definition_xrefs":["GOC:BHF","PMID:19100238","GOC:nc","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to cytokine stimulus","termid":"GO:0060761"},{"relation_name":"is_a","term_name":"regulation of response to macrophage colony-stimulating factor","termid":"GO:1903969"},{"relation_name":"negatively_regulates","term_name":"response to macrophage colony-stimulating factor","termid":"GO:0036005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to macrophage colony-stimulating factor","synonyms":[{"name":"down regulation of response to M-CSF","type":"exact"},{"name":"down regulation of response to macrophage colony-stimulating factor","type":"exact"},{"name":"down regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"down-regulation of response to M-CSF","type":"exact"},{"name":"down-regulation of response to macrophage colony-stimulating factor","type":"exact"},{"name":"down-regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"downregulation of response to M-CSF","type":"exact"},{"name":"downregulation of response to macrophage colony-stimulating factor","type":"exact"},{"name":"downregulation of response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"inhibition of response to M-CSF","type":"narrow"},{"name":"inhibition of response to macrophage colony-stimulating factor","type":"narrow"},{"name":"inhibition of response to macrophage colony-stimulating factor stimulus","type":"narrow"},{"name":"negative regulation of response to M-CSF","type":"exact"},{"name":"negative regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:1903970"}


id: PBO:0068857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 97, pseudogene","termid":"PBO:0068857"}


id: PBO:0027239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_streptothricin","termid":"PBO:0027239"}


id: PBO:0004651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor Sar1","termid":"PBO:0004651"}


id: GO:1902639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propan-2-ol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","GO_REF:0000068","PMID:16346237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"},{"relation_name":"is_a","term_name":"fatty alcohol metabolic process","termid":"GO:1903173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"propan-2-ol metabolic process","synonyms":[{"name":"Isopropanol metabolic process","type":"exact"},{"name":"Isopropyl alcohol metabolic process","type":"exact"},{"name":"propan-2-ol metabolism","type":"exact"}],"termid":"GO:1902639"}


id: GO:0050957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive an orientational stimulus, convert it to a molecular signal, and recognize and characterize the signal. Equilibrioception refers to a combination of processes by which an organism can perceive its orientation with respect to gravity. In animals, stimuli come from labyrinth system of the inner ears, monitoring the direction of motion; visual stimuli, with information on orientation and motion; pressure receptors, which tell the organism which body surfaces are in contact with the ground; and proprioceptive cues, which report which parts of the body are in motion.","definition_xrefs":["PMID:29303967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"},{"relation_name":"part_of","term_name":"neuromuscular process controlling balance","termid":"GO:0050885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"equilibrioception","secondary_identifiers":["Wikipedia:Equilibrioception"],"synonyms":[{"name":"sensory perception of orientation with respect to gravity","type":"exact"}],"termid":"GO:0050957"}


id: PBO:0091826
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae POL2","termid":"PBO:0091826"}


id: PBO:0034613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleosome_occupancy_at_centromere_central_core","termid":"PBO:0034613"}


id: PBO:0028222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_splicing","termid":"PBO:0028222"}


id: PBO:0058749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6873","termid":"PBO:0058749"}


id: PBO:0055547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2983","termid":"PBO:0055547"}


id: FYPO:0005192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which the response to nitrogen starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress","termid":"FYPO:0005191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular response to nitrogen starvation","synonyms":[{"name":"normal cellular response to nitrogen depletion","type":"exact"},{"name":"normal cellular response to nitrogen deprivation","type":"exact"}],"termid":"FYPO:0005192"}


id: PBO:0036035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_trimethylation_during_vegetative_growth","termid":"PBO:0036035"}


id: PBO:0083173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF RSC30/YHR056C","termid":"PBO:0083173"}


id: FYPO:0002619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sodium butyrate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0000257","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on sodium butyrate","synonyms":[{"name":"normal cell population growth in presence of sodium butyrate","type":"exact"},{"name":"normal cell population growth on sodium butyrate","type":"exact"},{"name":"normal cellular response to sodium butyrate","type":"related"},{"name":"normal vegetative cell population growth on sodium butyrate","type":"exact"}],"termid":"FYPO:0002619"}


id: PBO:0076461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase 1","termid":"PBO:0076461"}


id: GO:1900603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tensidol A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tensidol A metabolic process","synonyms":[{"name":"tensidol A metabolism","type":"exact"}],"termid":"GO:1900603"}


id: GO:1901298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hydrogen peroxide-mediated programmed cell death.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"hydrogen peroxide-mediated programmed cell death","termid":"GO:0010421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901298"}


id: GO:0060711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the labyrinthine layer of the placenta progresses, from its formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"embryonic placenta development","termid":"GO:0001892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labyrinthine layer development","termid":"GO:0060711"}


id: GO:0072039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"is_a","term_name":"regulation of somatic stem cell population maintenance","termid":"GO:1904672"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process","termid":"GO:2001053"},{"relation_name":"regulates","term_name":"mesenchymal stem cell maintenance involved in nephron morphogenesis","termid":"GO:0072038"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","synonyms":[{"name":"regulation of mesenchymal stem cell apoptosis involved in nephron morphogenesis","type":"narrow"},{"name":"regulation of mesenchymal stem cell apoptotic process involved in nephron morphogenesis","type":"exact"}],"termid":"GO:0072039"}


id: GO:0036498
data:
  {"annotated_genes":["SJAG_04435","SJAG_00790"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85636,89186],"is_not":false,"summary":null,"term":"GO:0036498"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by the endoplasmic reticulum stress sensor IRE1 (Inositol-requiring transmembrane kinase/endonuclease). Begins with activation of IRE1 in response to endoplasmic reticulum (ER) stress, and ends with regulation of a downstream cellular process, e.g. transcription. One target of activated IRE1 is the transcription factor HAC1 in yeast, or XBP1 in mammals; IRE1 cleaves an intron of a mRNA coding for HAC1/XBP1 to generate an activated HAC1/XBP1 transcription factor, which controls the up regulation of UPR-related genes. At least in mammals, IRE1 can also signal through additional intracellular pathways including JNK and NF-kappaB.","definition_xrefs":["GOC:PARL","PMID:22013210","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00790":null,"SJAG_04435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"IRE1-mediated unfolded protein response","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ERN1-mediated unfolded protein response","type":"related"},{"name":"IRE1 branch of UPR","type":"exact"},{"name":"IRE1 signal transduction pathway","type":"broad"},{"name":"IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"IRE1alpha unfolded protein response","type":"narrow"},{"name":"IRE1p unfolded protein response","type":"narrow"},{"name":"UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"inositol-requiring enzyme 1-mediated unfolded protein response","type":"related"},{"name":"inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"}],"termid":"GO:0036498","terms_by_termid":{"GO:0036498":null}}


id: FYPO:0003877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell undergoes one round of cell division, instead of the normal two rounds, prior to entering quiescence (G0).","definition_xrefs":["PomBase:mah","PMID:20133687","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal G1 to G0 transition","termid":"FYPO:0000427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"single cell division prior to G0 entry","synonyms":[{"name":"G0 to G1 transition after single cell division","type":"exact"},{"name":"one cell division prior to G0 entry","type":"exact"},{"name":"single cell division prior to cell quiescence entry","type":"exact"},{"name":"single cell division prior to quiescence entry","type":"exact"}],"termid":"FYPO:0003877"}


id: PBO:0042759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 41","termid":"PBO:0042759"}


id: PBO:0065479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD14 pseudogene 1","termid":"PBO:0065479"}


id: FYPO:0002981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is increased during a cellular response to methyl methanesulfonate. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"increased chromatin binding during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased chromatin binding during cellular response to MMS","type":"exact"},{"name":"increased chromatin binding during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0002981"}


id: PBO:0067809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 111","termid":"PBO:0067809"}


id: FYPO:0004745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation at centromere outer repeat during vegetative growth","termid":"FYPO:0003097"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0004170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 dimethylation at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"abolished histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abolished histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at centromere outer repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0004745"}


id: PR:O74873
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein transport protein Sec23B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec23-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC31H12.07","secondary_identifiers":["UniProtKB:O74873"],"synonyms":[{"name":"Spom972h-SEC23B","type":"exact"}],"termid":"PR:O74873"}


id: GO:0045259
data:
  {"annotated_genes":["SJAG_MIT09","SJAG_05204","SJAG_02105","SJAG_02564","SJAG_00836","SJAG_MIT37","SJAG_00438","SJAG_00542","SJAG_MIT15","SJAG_00915","SJAG_00133","SJAG_04122","SJAG_07003","SJAG_03925","SJAG_02598","SJAG_00985","SJAG_03114"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104877,88943,99131,101083],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045261"},{"annotations":[99756,89969,99785,97913,115111,89369,103993,115117,115121,90944],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045263"},{"annotations":[85251],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045267"},{"annotations":[103903,111930],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045265"}]},"cv_name":"cellular_component","definition":"A proton-transporting two-sector ATPase complex that catalyzes the phosphorylation of ADP to ATP during oxidative phosphorylation. The complex comprises a membrane sector (F0) that carries out proton transport and a cytoplasmic compartment sector (F1) that catalyzes ATP synthesis by a rotational mechanism; the extramembrane sector (containing 3 a and 3 b subunits) is connected via the d-subunit to the membrane sector by several smaller subunits. Within this complex, the g and e subunits and the 9-12 c subunits rotate by consecutive 120 degree angles and perform parts of ATP synthesis. This movement is driven by the hydrogen ion electrochemical potential gradient.","definition_xrefs":["ISBN:0198547684","ISBN:0716743663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"},{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting ATP synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0045255"],"synonyms":[{"name":"F1-F0 complex","type":"exact"},{"name":"hydrogen-translocating F-type ATPase complex","type":"exact"},{"name":"hydrogen-transporting ATP synthase complex","type":"exact"},{"name":"proton-transporting F-type ATPase complex","type":"related"}],"termid":"GO:0045259","terms_by_termid":{"GO:0045261":null,"GO:0045263":null,"GO:0045265":null,"GO:0045267":null}}


id: PBO:0073824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 3","termid":"PBO:0073824"}


id: MOD:00041
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-gamma-carboxyglutamic acid.","definition_xrefs":["PubMed:7457858","PubMed:3263814","PubMed:4528109","PubMed:8135347","PubMed:8868490","OMSSA:48","DeltaMass:217","PubMed:10517147","PubMed:1807167","RESID:AA0032","Unimod:299#E","PubMed:9188685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-gamma-carboxyglutamic acid","synonyms":[{"name":"(3S)-3-aminopropane-1,1,3-tricarboxylic acid","type":"exact"},{"name":"(3S)-3-azanylpropane-1,1,3-tricarboxylic acid","type":"exact"},{"name":"1-carboxyglutamic acid","type":"related"},{"name":"3-amino-1,1,3-propanetricarboxylic acid","type":"exact"},{"name":"3-azanylpropane-1,1,3-tricarboxylic acid","type":"exact"},{"name":"4-carboxyglutamic acid","type":"exact"},{"name":"4CbxGlu","type":"exact"},{"name":"Carboxy","type":"related"},{"name":"Carboxy Glutamyl","type":"exact"},{"name":"Carboxylation","type":"related"},{"name":"L-gamma-carboxyglutamic acid","type":"exact"},{"name":"MOD_RES 4-carboxyglutamate","type":"exact"},{"name":"gamma-carboxylated L-glutamic acid","type":"exact"},{"name":"gammacarboxyle","type":"exact"}],"termid":"MOD:00041"}


id: PBO:0026794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nuclear_periphery","termid":"PBO:0026794"}


id: GO:1900204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in metanephric collecting duct development.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:TermGenie","PMID:17314325","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"metanephric collecting duct development","termid":"GO:0072205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in metanephric collecting duct development","synonyms":[{"name":"apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"type I programmed cell death of metanephric collecting duct development","type":"narrow"}],"termid":"GO:1900204"}


id: GO:0140874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of paraherquonin, a meroterpenoid with a unique, highly congested hexacyclic molecular architecture.","definition_xrefs":["PMID:27602587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"paraherquonin biosynthetic process","synonyms":[{"name":"paraherquonin anabolism","type":"exact"},{"name":"paraherquonin biosynthesis","type":"exact"},{"name":"paraherquonin formation","type":"exact"},{"name":"paraherquonin synthesis","type":"exact"}],"termid":"GO:0140874"}


id: PR:O60057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug147 gene.","definition_xrefs":["UniProtKB:O60057","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 147 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.06","synonyms":[{"name":"Spom972h-mug147","type":"exact"}],"termid":"PR:O60057"}


id: PBO:0046916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 30 member C","termid":"PBO:0046916"}


id: PBO:0072267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 5","termid":"PBO:0072267"}


id: PBO:0052216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily S member 3","termid":"PBO:0052216"}


id: PBO:0076640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein like 2","termid":"PBO:0076640"}


id: SO:0000460
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Germline genomic DNA with the sequence for a V, D, C, or J portion of an immunoglobulin/T-cell receptor.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immunoglobulin_T_cell_receptor_segment","synonyms":[{"name":"vertebrate immunoglobulin T cell receptor segment","type":"exact"},{"name":"vertebrate_immunoglobulin/T-cell receptor gene","type":"exact"}],"termid":"SO:0000460"}


id: PBO:0066223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM26 antisense RNA 1","termid":"PBO:0066223"}


id: GO:0018162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a cross-link between peptidyl-cysteine and peptidyl-threonine via the formation of S-(2-aminovinyl)-3-methyl-D-cysteine.","definition_xrefs":["RESID:AA0253"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-(2-aminovinyl)-3-methyl-D-cysteine (obsolete GO:0018162)","termid":"GO:0018162"}


id: PBO:0082727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rix1 complex and possibly pre-replicative complexes; required for processing of ITS2 sequences from 35S pre-rRNA; component of the pre-60S ribosomal particle with the dynein-related AAA-type ATPase Mdn1p; required for pre-replicative complex (pre-RC) formation and maintenance during DNA replication licensing; relocalizes to the cytosol in response to hypoxia; essential gene","termid":"PBO:0082727"}


id: PBO:0047566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 17","termid":"PBO:0047566"}


id: PBO:0051185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-76 (pseudogene)","termid":"PBO:0051185"}


id: PBO:0064606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 3 homeobox 4","termid":"PBO:0064606"}


id: PBO:0034275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-obsolete_preceded_by","termid":"PBO:0034275"}


id: PBO:0063216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 1","termid":"PBO:0063216"}


id: PBO:0062455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 128 pseudogene","termid":"PBO:0062455"}


id: GO:0009904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The relocation process in which chloroplasts in photosynthetic cells move toward a brighter area in a cell to optimize photosynthesis.","definition_xrefs":["PMID:11978863","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast relocation","termid":"GO:0009902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"chloroplast accumulation movement","synonyms":[{"name":"low-fluence-rate response","type":"related"}],"termid":"GO:0009904"}


id: PBO:0062163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 4 pseudogene","termid":"PBO:0062163"}


id: SO:0000971
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000971 DNA_replication_mode (obsolete SO:0000971)","synonyms":[{"name":"DNA replication mode","type":"exact"}],"termid":"SO:0000971"}


id: MOD:01690
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-[(12R)-12-hydroxymyristoyl]-L-cysteine.","definition_xrefs":["RESID:AA0516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-[(12R)-12-hydroxymyristoyl]-L-cysteine","synonyms":[{"name":"2-[(12R)-12-hydroxytetradecanoyl]amino-3-sulfanylpropanoic acid","type":"exact"},{"name":"LIPID N-[(12R)-12-hydroxymyristoyl]cysteine","type":"exact"},{"name":"N-[(12R)-12-hydroxymyristoyl]-L-cysteine","type":"exact"},{"name":"N-[(12R)-12-hydroxytetradecanoyl]cysteine","type":"exact"}],"termid":"MOD:01690"}


id: GO:0008726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alkanesulfonate + O2 + FMNH2 = an aldehyde + sulfite + H2O + FMN.","definition_xrefs":["MetaCyc:RXN0-280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alkanesulfonate monooxygenase activity","secondary_identifiers":["EC:1.14.14.5","RHEA:23064"],"synonyms":[{"name":"FMNH(2)-dependent aliphatic sulfonate monooxygenase activity","type":"related"},{"name":"FMNH(2)-dependent alkanesulfonate monooxygenase activity","type":"exact"},{"name":"FMNH2-dependent aliphatic sulfonate monooxygenase activity","type":"related"},{"name":"SsuD","type":"related"},{"name":"alkanesulfonate, reduced-FMN:oxygen oxidoreductase activity","type":"related"},{"name":"alkanesulphonate monooxygenase activity","type":"exact"},{"name":"sulfate starvation-induced protein 6 activity","type":"related"}],"termid":"GO:0008726"}


id: PBO:0059802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 28","termid":"PBO:0059802"}


id: GO:0052208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type IV secretion system in the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of morphology or physiology of other organism via substance secreted by type IV secretion system involved in symbiotic interaction (obsolete GO:0052208)","synonyms":[{"name":"modification of morphology or physiology of other organism via substance secreted by type IV secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052208"}


id: PR:O43057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanine nucleotide exchange factor MSS4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13276:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide exchange factor MSS4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.04c","secondary_identifiers":["UniProtKB:O43057"],"synonyms":[{"name":"Spom972h-RABIF","type":"exact"}],"termid":"PR:O43057"}


id: GO:0033653
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any constituent part of a chloroplast as it is found in host cells and which are a chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell chloroplast","termid":"GO:0033652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell chloroplast part","synonyms":[{"name":"host chloroplast component","type":"exact"}],"termid":"GO:0033653"}


id: PBO:0016100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex GTPase subunit Gem1 (predicted)","termid":"PBO:0016100"}


id: PBO:0052494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 7","termid":"PBO:0052494"}


id: PBO:0060564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nibrin","termid":"PBO:0060564"}


id: PR:O42935
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3201 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L32-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.11","synonyms":[{"name":"Spom972h-rpl3201","type":"exact"}],"termid":"PR:O42935"}


id: PBO:0061681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 107","termid":"PBO:0061681"}


id: GO:0071606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 4 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 4 production","synonyms":[{"name":"CCL4 production","type":"exact"},{"name":"MIP-1b production","type":"exact"},{"name":"macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071606"}


id: FYPO:0005720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromosome recapture is normal (i.e. indistinguishable from wild type) during metaphase of mitosis. Chromosome recapture is the reattachment of chromosomes which have become detached from the spindle.","definition_xrefs":["PomBase:mah","GO:1990942","PMID:17881496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic metaphase chromosome recapture","synonyms":[{"name":"normal chromosome recapture during mitotic metaphase","type":"exact"},{"name":"normal kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"normal mitotic kinetochore retrieval","type":"exact"},{"name":"normal mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"normal mitotic metaphase chromosome retrieval to SPB","type":"exact"},{"name":"normal mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"normal mitotic sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0005720"}


id: PBO:0051532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 3","termid":"PBO:0051532"}


id: PBO:0085865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has similarity to Pmp3p, which is involved in cation transport; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0085865"}


id: GO:0010915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of very-low-density lipoprotein particle clearance. Very-low-density lipoprotein particle clearance is the process in which a very-low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"},{"relation_name":"regulates","term_name":"very-low-density lipoprotein particle clearance","termid":"GO:0034447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of very-low-density lipoprotein particle clearance","synonyms":[{"name":"regulation of VLDL clearance","type":"exact"},{"name":"regulation of VLDL particle clearance","type":"exact"}],"termid":"GO:0010915"}


id: PBO:0055560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2996","termid":"PBO:0055560"}


id: PBO:0058182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4476","termid":"PBO:0058182"}


id: GO:0045040
data:
  {"annotated_genes":["SJAG_01951","SJAG_03502","SJAG_02797","SJAG_03416","SJAG_02355","SJAG_01780","SJAG_02361","SJAG_02034","SJAG_00569"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86487,87014,94339,94685,103663,106138,106488,106498,107885],"is_not":false,"summary":null,"term":"GO:0045040"}]},"cv_name":"biological_process","definition":"The process comprising the insertion of proteins from outside the organelle into the mitochondrial outer membrane, mediated by large outer membrane translocase complexes.","definition_xrefs":["GOC:mcc","PMID:18672008","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transport","termid":"GO:0006839"},{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"outer mitochondrial membrane organization","termid":"GO:0007008"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00569":null,"SJAG_01780":null,"SJAG_01951":null,"SJAG_02034":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02797":null,"SJAG_03416":null,"SJAG_03502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0006605","GO:0007005","GO:0008150","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"protein insertion into mitochondrial outer membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial outer membrane protein import","type":"exact"},{"name":"protein import into mitochondrial outer membrane","type":"exact"},{"name":"protein transport into mitochondrial outer membrane","type":"exact"}],"termid":"GO:0045040","terms_by_termid":{"GO:0045040":null}}


id: GO:0008355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"associative learning","termid":"GO:0008306"},{"relation_name":"is_a","term_name":"olfactory behavior","termid":"GO:0042048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory learning","termid":"GO:0008355"}


id: PBO:0015656
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kcat/Km 2.1x10^4 min-1 M-1","termid":"PBO:0015656"}


id: GO:0045806
data:
  {"annotated_genes":["SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90683],"is_not":false,"summary":null,"term":"GO:0045806"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of endocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"negative regulation of endocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of endocytosis","type":"exact"},{"name":"down-regulation of endocytosis","type":"exact"},{"name":"downregulation of endocytosis","type":"exact"},{"name":"inhibition of endocytosis","type":"narrow"}],"termid":"GO:0045806","terms_by_termid":{"GO:0045806":null}}


id: PBO:0068541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 146, pseudogene","termid":"PBO:0068541"}


id: PR:Q10207
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17D1.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17D1.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.01","synonyms":[{"name":"Spom972h-SPBC17D1.01","type":"exact"}],"termid":"PR:Q10207"}


id: GO:0047370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-citramalate + succinyl-CoA = citramalyl-CoA + succinate.","definition_xrefs":["PMID:16547052","RHEA:38287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"succinate-citramalate CoA-transferase activity","secondary_identifiers":["MetaCyc:2.8.3.7-RXN"],"synonyms":[{"name":"citramalate coenzyme A-transferase activity","type":"exact"},{"name":"itaconate CoA-transferase activity","type":"exact"},{"name":"succinyl coenzyme A-citramalyl coenzyme A transferase activity","type":"exact"},{"name":"succinyl-CoA:citramalate CoA-transferase activity","type":"exact"}],"termid":"GO:0047370"}


id: PBO:0091313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC1 kinase family protein, human ADCK5 ortholog, unknown role","termid":"PBO:0091313"}


id: PBO:0085846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; phosphorylated in response to alpha factor; protein abundance increases in response to DNA replication stress","termid":"PBO:0085846"}


id: PBO:0090988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp36","termid":"PBO:0090988"}


id: SO:0002354
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small non-coding stem-loop RNA present in nematodes and insects, functionally and structurally related to vertebrate Y RNA.","definition_xrefs":["PMID:30666901","PMID:25908866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sbRNA","synonyms":[{"name":"Stem-bulge RNA","type":"exact"},{"name":"stem_bulge_RNA","type":"exact"}],"termid":"SO:0002354"}


id: PBO:0044678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible 1 homolog 2","termid":"PBO:0044678"}


id: PATO:0001227
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits variation or change.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant","synonyms":[{"name":"variable","type":"exact"}],"termid":"PATO:0001227"}


id: GO:0032823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell activation","termid":"GO:0032814"},{"relation_name":"is_a","term_name":"regulation of lymphocyte differentiation","termid":"GO:0045619"},{"relation_name":"regulates","term_name":"natural killer cell differentiation","termid":"GO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell differentiation","synonyms":[{"name":"regulation of NK cell differentiation","type":"exact"},{"name":"regulation of natural killer cell development","type":"related"}],"termid":"GO:0032823"}


id: GO:0140673
data:
  {"annotated_genes":["SJAG_00913","SJAG_02416","SJAG_04257","SJAG_00293","SJAG_00925","SJAG_04670","SJAG_03006","SJAG_00320","SJAG_00914","SJAG_03128","SJAG_02314","SJAG_02873","SJAG_04038","SJAG_02698","SJAG_02319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86185,87342,88476,89485,90715,91588,99667,104867,104872,107361,109703,110632,112304,112991,114899],"is_not":false,"summary":null,"term":"GO:0140673"}]},"cv_name":"biological_process","definition":"A chromatin remodeling process that reestablishes the chromatin structure following the passage of RNA polymerase II during transcription elongation, thus preventing cryptic transcription initiation.","definition_xrefs":["PMID:28053344","PMID:22922743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"part_of","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00320":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02416":null,"SJAG_02698":null,"SJAG_02873":null,"SJAG_03006":null,"SJAG_03128":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04670":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006325"],"is_obsolete":false,"name":"transcription elongation-coupled chromatin remodeling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication-independent chromatin organization","type":"related"},{"name":"chromatin maintenance during transcription elongation","type":"related"},{"name":"co-transcriptional chromatin reassembly","type":"exact"},{"name":"euchromatin maintenance during transcription elongation","type":"exact"},{"name":"maintenance of chromatin integrity during transcription elongation by RNAPII","type":"exact"},{"name":"maintenance of transcriptionally active chromatin during transcription elongation","type":"exact"},{"name":"transciptional elongation-coupled chromatin remodeling","type":"exact"},{"name":"transcription elongation coupled chromatin remodeling","type":"exact"},{"name":"transcriptional elongation-coupled chromatin remodeling","type":"exact"}],"termid":"GO:0140673","terms_by_termid":{"GO:0140673":null}}


id: GO:0009723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethylene (ethene) stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ethylene","synonyms":[{"name":"response to ethene stimulus","type":"exact"},{"name":"response to ethylene stimulus","type":"exact"}],"termid":"GO:0009723"}


id: PBO:0075077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 127","termid":"PBO:0075077"}


id: FYPO:0005938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at late replication origins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:24656819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at replication origin","termid":"FYPO:0004962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin at late replication origin","synonyms":[{"name":"normal protein localisation to chromatin at late replication origin","type":"exact"},{"name":"normal protein localization to chromatin at late origin","type":"exact"},{"name":"normal protein localization to chromatin at late replication origin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at late replication origin during vegetative growth","type":"exact"}],"termid":"FYPO:0005938"}


id: GO:1903416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycoside stimulus.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","PMID:16243970","GOC:mtg_cardiac_conduct_nov11","GO_REF:0000071","PMID:12027881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glycoside","synonyms":[{"name":"cellular response to ouabain","type":"related"}],"termid":"GO:1903416"}


id: GO:0080161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of auxins from one side of a membrane to the other. Auxins are plant hormones that regulate aspects of plant growth.","definition_xrefs":["PMID:19506555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"auxin transmembrane transporter activity","termid":"GO:0080161"}


id: PBO:0086979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the type I protein phosphatase (PP1) Glc7p; Glc7p participates in the regulation of a variety of metabolic processes including mitosis and glycogen metabolism; in vitro evidence suggests Ypi1p is an inhibitor of Glc7p while in vivo evidence suggests it is an activator; overproduction causes decreased cellular content of glycogen; partial depletion causes lithium sensitivity, while overproduction confers lithium-tolerance","termid":"PBO:0086979"}


id: FYPO:0004991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the meiotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during meiotic cell cycle","synonyms":[{"name":"decreased protein accumulation during meiotic cell cycle","type":"related"},{"name":"reduced protein level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004991"}


id: GO:0008417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"fucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9846332","Reactome:R-HSA-9033949"],"termid":"GO:0008417"}


id: PBO:0086131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for initiation of G0 program; prevents degradation of nutrient-regulated mRNAs via the 5'-3' mRNA decay pathway; phosphorylated by Rim15p; GFP protein localizes to the cytoplasm and nucleus; IGO2 has a paralog, IGO1, that arose from the whole genome duplication","termid":"PBO:0086131"}


id: FYPO:0002004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable microtubules of one or more types.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"microtubules absent from cell","synonyms":[{"name":"absent microtubules","type":"exact"},{"name":"microtubules absent from cell during mitotic cell cycle","type":"related"},{"name":"microtubules absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002004"}


id: GO:0048485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter.","definition_xrefs":["GOC:jid","FMA:9906","GOC:sr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"autonomic nervous system development","termid":"GO:0048483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sympathetic nervous system development","termid":"GO:0048485"}


id: GO:0004742
data:
  {"annotated_genes":["SJAG_02158","SJAG_00866"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110331,114524],"is_not":false,"summary":null,"term":"GO:0004742"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-N6-dihydrolipoyl-L-lysyl-[protein] + acetyl-CoA = (R)-N6-(S8-acetyldihydrolipoyl)-L-lysyl-[protein] + CoA.","definition_xrefs":["RHEA:17017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_02158":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"dihydrolipoyllysine-residue acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030523","EC:2.3.1.12"],"synonyms":[{"name":"acetyl-CoA: enzyme-6-N-(dihydrolipoyl)lysine S-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA: enzyme-N6-(dihydrolipoyl)lysine S-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:dihydrolipoamide S-acetyltransferase activity","type":"related"},{"name":"dihydrolipoamide S-acetyltransferase activity","type":"exact"},{"name":"dihydrolipoamide S-acyltransferase activity","type":"related"},{"name":"dihydrolipoate acetyltransferase activity","type":"related"},{"name":"dihydrolipoic transacetylase activity","type":"related"},{"name":"dihydrolipoyl acetyltransferase activity","type":"related"},{"name":"enzyme-dihydrolipoyllysine:acetyl-CoA S-acetyltransferase activity","type":"related"},{"name":"lipoate acetyltransferase activity","type":"related"},{"name":"lipoate transacetylase activity","type":"related"},{"name":"lipoic acetyltransferase activity","type":"related"},{"name":"lipoic acid acetyltransferase activity","type":"related"},{"name":"lipoic transacetylase activity","type":"related"},{"name":"lipoylacetyltransferase activity","type":"related"},{"name":"thioltransacetylase A activity","type":"narrow"},{"name":"transacetylase X activity","type":"narrow"}],"termid":"GO:0004742","terms_by_termid":{"GO:0004742":null}}


id: GO:0038015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which internalization of an insulin receptor activates or increases the frequency, rate or extent of the insulin receptor signaling pathway. Endocytosis of activated receptors can concentrate receptors within endosomes and allow the insulin receptor to phosphorylate substrates that are spatially distinct from those accessible at the plasma membrane.","definition_xrefs":["PMID:9609114","GOC:signaling","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction by receptor internalization","termid":"GO:0038010"},{"relation_name":"is_a","term_name":"insulin receptor internalization","termid":"GO:0038016"},{"relation_name":"is_a","term_name":"positive regulation of insulin receptor signaling pathway","termid":"GO:0046628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0023052","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"positive regulation of insulin receptor signaling pathway by insulin receptor internalization","synonyms":[{"name":"positive regulation of insulin receptor signalling pathway by insulin receptor internalization","type":"exact"}],"termid":"GO:0038015"}


id: PBO:0027688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA-directed_DNA_polymerase_activity","termid":"PBO:0027688"}


id: GO:0016555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a uridine residue to cytosine in an RNA molecule by amination.","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base conversion or substitution editing","termid":"GO:0016553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uridine to cytidine editing","termid":"GO:0016555"}


id: GO:0015918
data:
  {"annotated_genes":["SJAG_00355","SJAG_02375","SJAG_01590","SJAG_03718","SJAG_02323","SJAG_01329","SJAG_01722","SJAG_01407","SJAG_00261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90351,98708,104299,105456,107417,112315],"is_not":false,"summary":null,"term":"GO:0015918"},{"annotations":[102407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"},{"annotations":[97763,102408,97573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"}]},"cv_name":"biological_process","definition":"The directed movement of sterols into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_00355":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sterol transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015918","terms_by_termid":{"GO:0015918":null,"GO:0032366":null,"GO:0120011":null}}


id: PBO:0078789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 12-1","termid":"PBO:0078789"}


id: GO:1900151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.","definition_xrefs":["GOC:mcc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"regulates","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:0000288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","synonyms":[{"name":"regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"}],"termid":"GO:1900151"}


id: GO:0010090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a hair cell (trichome) cell are generated and organized. This process occurs while the initially relatively unspecialized epidermal cell is acquiring the specialized features of a hair cell. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"trichome differentiation","termid":"GO:0010026"},{"relation_name":"part_of","term_name":"plant epidermis morphogenesis","termid":"GO:0090626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichome morphogenesis","secondary_identifiers":["GO:0048272"],"synonyms":[{"name":"trichome cell morphogenesis during differentiation","type":"exact"}],"termid":"GO:0010090"}


id: GO:0001675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the acrosome from the spermatid Golgi.","definition_xrefs":["GOC:hjd","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"acrosome assembly","synonyms":[{"name":"acrosome formation","type":"exact"}],"termid":"GO:0001675"}


id: GO:0033626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of integrin activation by cell surface receptor linked signal transduction. This can occur by increased affinity of an integrin for its extracellular ligands.","definition_xrefs":["GOC:add","PMID:12213832","PMID:14754902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"positive regulation of integrin activation","termid":"GO:0033625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0023052","GO:0065003"],"is_obsolete":false,"name":"positive regulation of integrin activation by cell surface receptor linked signal transduction","synonyms":[{"name":"cell surface receptor linked signal transduction leading to integrin activation","type":"exact"},{"name":"cell surface receptor linked signal transduction leading to integrin complex activation","type":"exact"}],"termid":"GO:0033626"}


id: GO:0042022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-12 and that consists of, at a minimum, a dimeric interleukin and its two receptor subunits as well as optional additional kinase subunits.","definition_xrefs":["GOC:ebc","GOC:mah","PMID:10971505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"interleukin-12 receptor complex","synonyms":[{"name":"IL-12 receptor complex","type":"exact"},{"name":"IL12RB1-IL12RB2 complex","type":"narrow"}],"termid":"GO:0042022"}


id: PBO:0086400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative divalent metal ion transporter involved in iron homeostasis; transcriptionally regulated by metal ions; member of the Nramp family of metal transport proteins; protein abundance increases in response to DNA replication stress","termid":"PBO:0086400"}


id: GO:0102696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + cis-zeatin = H+ + 9-(alpha-D-glucosyl)-cis-zeatin + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-zeatin UDP glycosyltransferase activity (obsolete GO:0102696)","termid":"GO:0102696"}


id: GO:0000412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by cis-trans isomerization of a proline residue.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete histone peptidyl-prolyl isomerization (obsolete GO:0000412)","synonyms":[{"name":"histone proline isomerization","type":"exact"}],"termid":"GO:0000412"}


id: GO:0052346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of nitric oxide as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont nitric oxide production (obsolete GO:0052346)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont NO production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052346"}


id: PBO:0069632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 909, pseudogene","termid":"PBO:0069632"}


id: PBO:0053674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 857","termid":"PBO:0053674"}


id: PR:000050599
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase PP1-1 (Schizosaccharomyces pombe) that has not been phosphorylated at the position equivalent to Thr-316 of the amino acid sequence represented by UniProtKB:P13681. Example: UniProtKB:P13681, Thr-316, PR:000026291.","definition_xrefs":["PMID:29899453","PMID:7957097","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase sid2 (Schizosaccharomyces pombe)","termid":"PR:000050482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dis2/UnPhos(T316)","pombase_gene_id":"SPBC776.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein phosphatase PP1-1 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-dis2/UnPhos:1","type":"exact"},{"name":"UniProtKB:P13681, Thr-316, PR:000026291","type":"narrow"},{"name":"dis2/UnPhos(T316)","type":"exact"}],"termid":"PR:000050599"}


id: GO:0046624
data:
  {"annotated_genes":["SJAG_01731","SJAG_02897"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94040,90531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140351"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of sphingolipids into, out of or within a cell, or between cells. Sphingolipids are a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sphingolipid transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9843721","Reactome:R-HSA-9695890"],"termid":"GO:0046624","terms_by_termid":{"GO:0140351":null}}


id: PBO:0064335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLSCR4 pseudogene 1","termid":"PBO:0064335"}


id: PBO:0063871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class C","termid":"PBO:0063871"}


id: GO:2000883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of starch catabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of starch catabolic process","termid":"GO:2000881"},{"relation_name":"is_a","term_name":"positive regulation of starch metabolic process","termid":"GO:2000906"},{"relation_name":"positively_regulates","term_name":"starch catabolic process","termid":"GO:0005983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of starch catabolic process","synonyms":[{"name":"positive regulation of starch breakdown","type":"exact"},{"name":"positive regulation of starch catabolism","type":"exact"},{"name":"positive regulation of starch degradation","type":"exact"}],"termid":"GO:2000883"}


id: GO:0045464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an R8 cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate specification","termid":"GO:0043704"},{"relation_name":"part_of","term_name":"R8 cell fate commitment","termid":"GO:0007460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R8 cell fate specification","termid":"GO:0045464"}


id: PBO:0001088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR26 family, ubiquitin ligase complex subunit (predicted)","termid":"PBO:0001088"}


id: GO:0097536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the thymus epithelium is generated and organized.","definition_xrefs":["GOC:pr","PMID:22342843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"thymus development","termid":"GO:0048538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymus epithelium morphogenesis","synonyms":[{"name":"thymic epithelium morphogenesis","type":"exact"}],"termid":"GO:0097536"}


id: PBO:0109510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARGLU1 divergent transcript","termid":"PBO:0109510"}


id: PBO:0057849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3160-2","termid":"PBO:0057849"}


id: PBO:0059337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S7 pseudogene 2","termid":"PBO:0059337"}


id: FYPO:0006964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme A measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular coenzyme A level","synonyms":[{"name":"increased cellular CoA level","type":"exact"},{"name":"increased cellular coenzyme A level during mitotic cell cycle","type":"related"},{"name":"increased cellular coenzyme A level during vegetative growth","type":"exact"},{"name":"increased coenzyme A accumulation","type":"related"}],"termid":"FYPO:0006964"}


id: GO:0010934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a macrophage cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:rl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"macrophage cytokine production","termid":"GO:0010934"}


id: PBO:0086152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for optimal translation under nutrient stress; perturbs association of Yef3p with ribosomes; involved in TOR signaling; binds G4 quadruplex and purine motif triplex nucleic acid; helps maintain telomere structure; protein abundance increases in response to DNA replication stress; serves as a ribosome preservation factor both during quiescence and recovery","termid":"PBO:0086152"}


id: PBO:0086731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant displays elevated sensitivity to expression of a mutant huntingtin fragment or of alpha-synuclein; YGL262W is not an essential gene","termid":"PBO:0086731"}


id: PBO:0087742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; functions interdependently in transcriptional activation with Snf2p and Snf6p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0087742"}


id: PBO:0090414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc37","termid":"PBO:0090414"}


id: GO:0007633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actions or reactions of an individual in response to the orientation of a visual pattern. This is exemplified by some classes of insects which are able to detect and learn the orientation of a set of stripes and subsequently behaviorally discriminate between horizontal, vertical or 45 degree stripes.","definition_xrefs":["GOC:jid","PMID:9933535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual behavior","termid":"GO:0007632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern orientation","synonyms":[{"name":"behavioral response to pattern orientation","type":"exact"},{"name":"behavioural response to pattern orientation","type":"exact"}],"termid":"GO:0007633"}


id: PBO:0068191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 498","termid":"PBO:0068191"}


id: PBO:0086326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to monocarboxylate permeases; appears not to be involved in transport of monocarboxylates such as lactate, pyruvate or acetate across the plasma membrane","termid":"PBO:0086326"}


id: GO:1901853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5,6,7,8-tetrahydrosarcinapterin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00069","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"},{"relation_name":"is_a","term_name":"tetrahydromethanopterin metabolic process","termid":"GO:2001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"5,6,7,8-tetrahydrosarcinapterin metabolic process","synonyms":[{"name":"5,6,7,8-tetrahydrosarcinapterin metabolism","type":"exact"}],"termid":"GO:1901853"}


id: PBO:0110243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex histone fold subunit Php5","termid":"PBO:0110243"}


id: GO:0002721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"regulates","term_name":"B cell cytokine production","termid":"GO:0002368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of B cell cytokine production","synonyms":[{"name":"regulation of B lymphocyte cytokine production","type":"exact"},{"name":"regulation of B-cell cytokine production","type":"exact"},{"name":"regulation of B-lymphocyte cytokine production","type":"exact"}],"termid":"GO:0002721"}


id: PBO:0058839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8069","termid":"PBO:0058839"}


id: GO:0050003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dCMP = 2'-deoxy-5-methyl-5'-cytidylate + 7,8-dihydrofolate.","definition_xrefs":["EC:2.1.1.54","RHEA:11568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"deoxycytidylate C-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01670","MetaCyc:DEOXYCYTIDYLATE-C-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:dCMP C-methyltransferase activity","type":"related"},{"name":"dCMP methyltransferase activity","type":"related"},{"name":"deoxycytidylate methyltransferase activity","type":"related"}],"termid":"GO:0050003"}


id: PBO:0047006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A9","termid":"PBO:0047006"}


id: GO:0021719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the superior olivary nucleus is generated and organized. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","GOC:dph","ISBN:0838580343","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"},{"relation_name":"part_of","term_name":"superior olivary nucleus development","termid":"GO:0021718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus morphogenesis","synonyms":[{"name":"superior olive morphogenesis","type":"related"}],"termid":"GO:0021719"}


id: GO:0010854
data:
  {"annotated_genes":["SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010856"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of adenylate cyclase.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase regulator activity","termid":"GO:0010851"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"adenylate cyclase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010854","terms_by_termid":{"GO:0010856":null}}


id: PBO:0087855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator essential for nuclear division; localized to the nucleus; essential component of the mechanism that activates the expression of a set of late-S-phase-specific genes; turnover is tightly regulated during cell cycle and in response to DNA damage","termid":"PBO:0087855"}


id: GO:0097376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of an interneuron is directed to a specific target site in response to a combination of attractive and repulsive cues. An interneuron is any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region, as contrasted with projection neurons which have axons projecting to other brain regions.","definition_xrefs":["CL:0000099","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"interneuron axon guidance","termid":"GO:0097376"}


id: GO:0050449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = casbene + diphosphate.","definition_xrefs":["RHEA:14901","EC:4.2.3.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"casbene synthase activity","secondary_identifiers":["MetaCyc:CASBENE-SYNTHASE-RXN","KEGG_REACTION:R02064"],"synonyms":[{"name":"casbene synthetase activity","type":"related"},{"name":"geranylgeranyl-diphosphate diphosphate-lyase (cyclizing)","type":"related"},{"name":"geranylgeranyl-diphosphate diphosphate-lyase (cyclizing, casbene-forming)","type":"related"}],"termid":"GO:0050449"}


id: GO:1904162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any 5'-3' exodeoxyribonuclease activity that is involved in UV-damage excision repair.","definition_xrefs":["GO_REF:0000061","PMID:10704216","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete 5'-3' exodeoxyribonuclease activity involved in UV-damage excision repair (obsolete GO:1904162)","synonyms":[{"name":"5'-3' exodeoxyribonuclease activity involved in AER","type":"related"},{"name":"5'-3' exodeoxyribonuclease activity involved in UV-damaged DNA endonuclease-dependent excision repair","type":"exact"},{"name":"5'-3' exodeoxyribonuclease activity involved in UVDE-dependent excision repair","type":"exact"},{"name":"5'-3' exodeoxyribonuclease activity involved in UVER","type":"exact"},{"name":"5'-3' exodeoxyribonuclease activity involved in alternative excision repair","type":"related"}],"termid":"GO:1904162"}


id: GO:0036000
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small subcellular vesicle, surrounded by a membrane, in the pellicle of ciliate protozoans that discharges a mucus-like secretion.","definition_xrefs":["GOC:mag","PMID:4629881","PMID:10723937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mucocyst","termid":"GO:0036000"}


id: GO:0044490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:21781281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of voltage-gated sodium channel activity in another organism","termid":"GO:0044488"},{"relation_name":"is_a","term_name":"positive regulation of molecular function in another organism","termid":"GO:0044491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of voltage-gated sodium channel activity in another organism","synonyms":[{"name":"positive regulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044490"}


id: GO:2000963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellooligosaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cellooligosaccharide metabolic process","termid":"GO:2000960"},{"relation_name":"regulates","term_name":"cellooligosaccharide catabolic process","termid":"GO:2000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cellooligosaccharide catabolic process","synonyms":[{"name":"regulation of cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000963"}


id: PBO:0090728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brix domain protein Rpf1","termid":"PBO:0090728"}


id: PBO:0069662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 939, pseudogene","termid":"PBO:0069662"}


id: PBO:0044078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin like 1","termid":"PBO:0044078"}


id: PBO:0062382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily D member 11 pseudogene","termid":"PBO:0062382"}


id: PBO:0044608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 12 like 2","termid":"PBO:0044608"}


id: PBO:0069918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1210, pseudogene","termid":"PBO:0069918"}


id: FYPO:0006442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the proteolytic processing of sterol regulatory element binding protein (SREBP) into its transcriptionally active form is activated continuously. Normally, SREBP is cleaved only in response to altered levels of one or more lipids.","definition_xrefs":["PMID:18503029","PomBase:mah","GO:0035103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein processing during vegetative growth","termid":"FYPO:0001421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"constitutively activated sterol regulatory element binding protein cleavage","synonyms":[{"name":"constitutively activated SREBP cleavage","type":"exact"},{"name":"constitutively activated sterol regulatory element binding protein cleavage during mitotic cell cycle","type":"related"},{"name":"constitutively activated sterol regulatory element binding protein cleavage during vegetative growth","type":"exact"}],"termid":"FYPO:0006442"}


id: PBO:0036088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclease_activity_during_nitrogen_starvation","termid":"PBO:0036088"}


id: PBO:0058489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5683","termid":"PBO:0058489"}


id: PR:O74864
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S acidic ribosomal protein P0 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04894","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P0 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.14c","secondary_identifiers":["UniProtKB:O74864"],"synonyms":[{"name":"Spom972h-RPLP0","type":"exact"}],"termid":"PR:O74864"}


id: PBO:0031296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated,_multiseptate_cell","termid":"PBO:0031296"}


id: GO:0030619
data:
  {"annotated_genes":["SJAG_05009","SJAG_04911","SJAG_03983","SJAG_04497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87667,94131,106740,109378],"is_not":false,"summary":null,"term":"GO:0030619"}]},"cv_name":"molecular_function","definition":"Binding to a U1 small nuclear RNA (U1 snRNA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03983":null,"SJAG_04497":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"U1 snRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030619","terms_by_termid":{"GO:0030619":null}}


id: GO:0061638
data:
  {"annotated_genes":["SJAG_01745","SJAG_02778","SJAG_00307","SJAG_03126","SJAG_00768","SJAG_00170","SJAG_04038","SJAG_01050","SJAG_01332"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86177,87431,88165,98156,102375,105754,108040,112610,113224],"is_not":false,"summary":null,"term":"GO:0061638"},{"annotations":[98157],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043505"}]},"cv_name":"cellular_component","definition":"The specialized chromatin located in the centromeric core region or the entire centromeric region in organisms with point centromeres, which is enriched for CENP-A-containing nucleosomes. This chromatin forms a 3-dimensional structure which provides a platform for kinetochore assembly and microtubule attachment.","definition_xrefs":["PMID:22729156","PMID:20206496","GOC:vw","PMID:24710126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin","termid":"GO:0000785"},{"relation_name":"part_of","term_name":"chromosome, centromeric core domain","termid":"GO:0034506"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00307":null,"SJAG_00768":null,"SJAG_01050":null,"SJAG_01332":null,"SJAG_01745":null,"SJAG_02778":null,"SJAG_03126":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"CENP-A containing chromatin","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1904834"],"synonyms":[{"name":"centromeric core domain chromatin","type":"related"},{"name":"centromeric core region chromatin","type":"exact"},{"name":"chromatin containing CENP-A","type":"exact"},{"name":"nuclear CENP-A containing chromatin","type":"narrow"}],"termid":"GO:0061638","terms_by_termid":{"GO:0043505":null,"GO:0061638":null}}


id: GO:1901983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein acetylation.","definition_xrefs":["PMID:22117195","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein acetylation","synonyms":[{"name":"regulation of protein amino acid acetylation","type":"exact"}],"termid":"GO:1901983"}


id: GO:1905892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to thapsigargin.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bc","PMID:21803450","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular response to thapsigargin (obsolete GO:1905892)","synonyms":[{"name":"down regulation of cellular response to thapsigargin","type":"exact"},{"name":"down-regulation of cellular response to thapsigargin","type":"exact"},{"name":"downregulation of cellular response to thapsigargin","type":"exact"},{"name":"inhibition of cellular response to thapsigargin","type":"narrow"}],"termid":"GO:1905892"}


id: FYPO:0007234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the central core of the centromeric region of a chromosome is normal (i.e. indistinguishable from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromere during vegetative growth","termid":"FYPO:0002574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to centromere central core","synonyms":[{"name":"normal protein localisation to centromere central core","type":"exact"},{"name":"normal protein localization to centromere central core during mitotic cell cycle","type":"related"},{"name":"normal protein localization to centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0007234"}


id: PBO:0061822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 12 Y-linked","termid":"PBO:0061822"}


id: GO:0016356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete organophosphorus susceptibility/resistance (obsolete GO:0016356)","synonyms":[{"name":"organophosphorus susceptibility/resistance","type":"exact"}],"termid":"GO:0016356"}


id: SO:1000127
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000127 sequence_variant_causing_compensatory_transcript_secondary_structure_mutation (obsolete SO:1000127)","synonyms":[{"name":"mutation causing compensatory transcript secondary structure mutation","type":"related"},{"name":"sequence variant causing compensatory transcript secondary structure mutation","type":"exact"}],"termid":"SO:1000127"}


id: GO:0071537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a C3HC4-type RING finger domain interaction.","definition_xrefs":["InterPro:IPR018957","GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete C3HC4-type RING finger domain-mediated complex assembly (obsolete GO:0071537)","synonyms":[{"name":"zinc finger C3HC4 type domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071537"}


id: SO:0001998
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small RNA oligo, typically about 20 bases, that guides the cas nuclease to a target DNA sequence in the CRISPR/cas mutagenesis method.","definition_xrefs":["PMID:23934893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sgRNA","synonyms":[{"name":"gRNA","type":"related"},{"name":"guide RNA","type":"related"},{"name":"small guide RNA","type":"exact"}],"termid":"SO:0001998"}


id: GO:0140907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R-CH + a halogen + FADH2 + O2 = R-C-halogen + FAD + H2O.","definition_xrefs":["PMID:28466644","PMID:34368824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenase activity","termid":"GO:0140906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"flavin-dependent halogenase activity","termid":"GO:0140907"}


id: PBO:0110316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF for Sar1, WD repeat protein Spo14","termid":"PBO:0110316"}


id: GO:0035679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when an anterior lateral line neuromast hair cell progresses from its initial formation to its mature state. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface.","definition_xrefs":["ISBN:0387968377","ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell morphogenesis","termid":"GO:0035678"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast hair cell development","termid":"GO:0035676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast hair cell morphogenesis","termid":"GO:0035679"}


id: GO:0050328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-tetrahydroberberine + 2 O2 = berberine + 2 H2O2.","definition_xrefs":["MetaCyc:TETRAHYDROBERBERINE-OXIDASE-RXN","EC:1.3.3.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tetrahydroberberine oxidase activity","secondary_identifiers":["RHEA:13489"],"synonyms":[{"name":"(S)-THB oxidase activity","type":"related"},{"name":"(S)-tetrahydroberberine:oxygen oxidoreductase activity","type":"related"},{"name":"THB oxidase activity","type":"related"}],"termid":"GO:0050328"}


id: GO:0004211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-9 activity (obsolete GO:0004211)","synonyms":[{"name":"caspase-9 activity","type":"exact"}],"termid":"GO:0004211"}


id: PR:Q9P785
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mucin-7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LisH domain-containing protein C1711.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.05","secondary_identifiers":["UniProtKB:Q9P785"],"synonyms":[{"name":"Spom972h-MUC7","type":"exact"}],"termid":"PR:Q9P785"}


id: GO:0048046
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and includes cell walls, intercellular spaces and the lumen of dead structures such as xylem vessels. Water and solutes pass freely through it.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"apoplast","secondary_identifiers":["Wikipedia:Apoplast"],"termid":"GO:0048046"}


id: PBO:0087727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p); this complex forms a channel for passage of secretory proteins through the endoplasmic reticulum membrane, and of the Ssh1p complex (Ssh1p-Sbh2p-Sss1p); interacts with Ost4p and Wbp1p","termid":"PBO:0087727"}


id: GO:0016524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with alpha-latrotoxin, a potent presynaptic neurotoxin, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:10025961","GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"latrotoxin receptor activity","synonyms":[{"name":"latrophilin","type":"narrow"}],"termid":"GO:0016524"}


id: PBO:0085295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pheromone-regulated protein; contains with 2 predicted transmembrane segments and an FF sequence, a motif involved in COPII binding; forms a complex with Prp9p in the ER; member of DUP240 gene family; PRM8 has a paralog, PRM9, that arose from a segmental duplication","termid":"PBO:0085295"}


id: PBO:0000050
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by Chp1","termid":"PBO:0000050"}


id: PBO:0089468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex subunit B, Pcf2","termid":"PBO:0089468"}


id: PBO:0071309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 32","termid":"PBO:0071309"}


id: PBO:0069625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 902, pseudogene","termid":"PBO:0069625"}


id: PBO:0050903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFI30 lysosomal thiol reductase","termid":"PBO:0050903"}


id: PBO:0029561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cilofungin","termid":"PBO:0029561"}


id: PBO:0075304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 2 pseudogene 2","termid":"PBO:0075304"}


id: SO:0002255
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The portion of a stem loop where the RNA is folded back upon itself. ","direct_ancestors":[{"relation_name":"is_a","term_name":"stem_loop_region","termid":"SO:0002253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem","synonyms":[{"name":"stem portion of stem loop","type":"exact"}],"termid":"SO:0002255"}


id: PBO:0074564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 18","termid":"PBO:0074564"}


id: PBO:0069913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1205, pseudogene","termid":"PBO:0069913"}


id: GO:0031686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an A1 adenosine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine receptor binding","termid":"GO:0031685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"A1 adenosine receptor binding","synonyms":[{"name":"A1 adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031686"}


id: PBO:0089693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Munc family exocytic/endocytic regulator Ync13","termid":"PBO:0089693"}


id: PBO:0076585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 8B","termid":"PBO:0076585"}


id: PBO:0063503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoinositide dependent protein kinase 2, pseudogene","termid":"PBO:0063503"}


id: PBO:0089280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, transmembrane ring glycoprotein subunit Pom152","termid":"PBO:0089280"}


id: GO:0019108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic aldehyde + NAD+ + H2O = an aromatic acid + NADH + H+.","definition_xrefs":["EC:1.2.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aryl-aldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:ARYL-ALDEHYDE-DEHYDROGENASE-RXN","UM-BBD_reactionID:r0394","RHEA:11804"],"synonyms":[{"name":"aryl-aldehyde dehydrogenase (NAD) activity","type":"exact"},{"name":"aryl-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0019108"}


id: PBO:0051805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQSEC3 antisense RNA 1","termid":"PBO:0051805"}


id: PBO:0058730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6858","termid":"PBO:0058730"}


id: GO:0007395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Dorsally-directed movement of a cell at the leading edge of the epithelium over the amnioserosa.","definition_xrefs":["PMID:12147138","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"dorsal closure","termid":"GO:0007391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, spreading of leading edge cells","termid":"GO:0007395"}


id: FYPO:0002466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and cells with abnormal morphology (i.e. size, shape, or structure). The cells with normal morphology arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and cells with abnormal morphology (obsolete FYPO:0002466)","termid":"FYPO:0002466"}


id: PBO:0066102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS and EF-hand domain containing","termid":"PBO:0066102"}


id: PR:Q9USY2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A squamous cell carcinoma antigen recognized by T-cells 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23269:SF0","OMA:SCHPO04004","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C1861.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.04c","secondary_identifiers":["UniProtKB:Q9USY2"],"synonyms":[{"name":"Spom972h-SART3","type":"exact"}],"termid":"PR:Q9USY2"}


id: GO:0051240
data:
  {"annotated_genes":["SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075319"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an organismal process, any of the processes pertinent to the function of an organism above the cellular level; includes the integrated processes of tissues and organs.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"positively_regulates","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03501":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of multicellular organismal process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of multicellular organismal process","type":"narrow"},{"name":"stimulation of multicellular organismal process","type":"narrow"},{"name":"up regulation of multicellular organismal process","type":"exact"},{"name":"up-regulation of multicellular organismal process","type":"exact"},{"name":"upregulation of multicellular organismal process","type":"exact"}],"termid":"GO:0051240","terms_by_termid":{"GO:0075319":null}}


id: PBO:0090669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ku domain helicase (human XRCC5 ortholog) Pku80","termid":"PBO:0090669"}


id: GO:0140683
data:
  {"annotated_genes":["SJAG_02401","SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90187,99333],"is_not":false,"summary":null,"term":"GO:0140683"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a di or a monomethyl-lysine residue at position 9 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:16603238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3K9 demethylase activity","termid":"GO:0032454"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02401":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016491","GO:0003674","GO:0032452"],"is_obsolete":false,"name":"histone H3K9me/H3K9me2 demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.14.11.65","RHEA:60188"],"synonyms":[{"name":"histone H3-di/monomethyl-lysine-9 demethylase activity","type":"exact"},{"name":"histone H3K9me demethylase activity","type":"broad"},{"name":"histone H3K9me2 demethylase activity","type":"broad"}],"termid":"GO:0140683","terms_by_termid":{"GO:0140683":null}}


id: PBO:0111767
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PY motif","termid":"PBO:0111767"}


id: FYPO:0000403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the duration of progression through the G2/M transition of the mitotic cell cycle is increased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased duration of mitotic G2/M phase transition (obsolete FYPO:0000403)","synonyms":[{"name":"cell cycle progression through the G2/M phase transition: increased duration","type":"related"},{"name":"increased duration of cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"increased duration of mitotic G2/M phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000403"}


id: PBO:0048689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIPR1 like 1","termid":"PBO:0048689"}


id: GO:0102472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eriodictyol + NADPH + O2 + 2 H+ = 2-hydroxyeriodictyol + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"eriodictyol 2-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14077","RHEA:57596"],"termid":"GO:0102472"}


id: FYPO:0001756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of protein phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal protein phosphatase activity","synonyms":[{"name":"abnormal phosphoprotein phosphatase activity","type":"exact"}],"termid":"FYPO:0001756"}


id: GO:0047779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + citrate + CoA = (3S)-citryl-CoA + ADP + H+ + phosphate.","definition_xrefs":["EC:6.2.1.18","RHEA:21472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"citrate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R01322","MetaCyc:CITRATE--COA-LIGASE-RXN"],"synonyms":[{"name":"citrate thiokinase activity","type":"related"},{"name":"citrate:CoA ligase (ADP-forming)","type":"related"},{"name":"citrate:CoA ligase activity","type":"related"},{"name":"citryl-CoA synthetase activity","type":"related"}],"termid":"GO:0047779"}


id: PR:C6Y4C1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet117 gene.","definition_xrefs":["UniProtKB:C6Y4C1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pet117, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.25","synonyms":[{"name":"Spom972h-pet117","type":"exact"}],"termid":"PR:C6Y4C1"}


id: GO:0046895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal isoleucine of proteins to form the derivative N-methyl-L-isoleucine.","definition_xrefs":["RESID:AA0336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-isoleucine modification","termid":"GO:0018203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-isoleucine methylation","termid":"GO:0046895"}


id: PBO:0080022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 8","termid":"PBO:0080022"}


id: GO:2000816
data:
  {"annotated_genes":["SJAG_01679","SJAG_02336","SJAG_01297","SJAG_04126","SJAG_02451","SJAG_02169","SJAG_03681","SJAG_03353","SJAG_03126","SJAG_00460","SJAG_04699","SJAG_04884","SJAG_04259","SJAG_01837","SJAG_04999","SJAG_01082","SJAG_01330","SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99381],"is_not":false,"summary":null,"term":"GO:2000816"},{"annotations":[104345,95685,103323,110359,108051,99995,86834,111987,109879],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[95533,110588,106000,111636,97895,102398,86836,109883,112765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[111637,102399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[90303],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112769],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[90304],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic sister chromatid separation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid separation","termid":"GO:0010965"},{"relation_name":"is_a","term_name":"negative regulation of mitotic sister chromatid segregation","termid":"GO:0033048"},{"relation_name":"is_a","term_name":"negative regulation of chromosome separation","termid":"GO:1905819"},{"relation_name":"negatively_regulates","term_name":"mitotic sister chromatid separation","termid":"GO:0051306"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic sister chromatid separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of chromosome separation during mitosis","type":"related"},{"name":"negative regulation of mitotic chromosome separation","type":"related"},{"name":"negative regulation of mitotic sister chromatid resolution","type":"exact"},{"name":"negative regulation of sister chromatid separation during mitosis","type":"exact"}],"termid":"GO:2000816","terms_by_termid":{"GO:0007094":null,"GO:0045841":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:2000816":null}}


id: FYPO:0004067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","GO:0071619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during mitotic cell cycle","type":"related"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 2 residues during vegetative growth","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0004067"}


id: PBO:0083388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps HAC1/YFL031W; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083388"}


id: PBO:0054948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2362","termid":"PBO:0054948"}


id: PBO:0077489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 209","termid":"PBO:0077489"}


id: PATO:0000482
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000482 response value (obsolete PATO:0000482)","termid":"PATO:0000482"}


id: GO:0019757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving glycosinolates, substituted thioglycosides found in rapeseed products and related cruciferae.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete glycosinolate metabolic process (obsolete GO:0019757)","synonyms":[{"name":"glycosinolate metabolism","type":"exact"}],"termid":"GO:0019757"}


id: PBO:0035907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-C-shaped_vegetative_cell","termid":"PBO:0035907"}


id: PR:Q9UTA8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTA8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase-like C25B8.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.10","synonyms":[{"name":"Spom972h-SPAC25B8.10","type":"exact"}],"termid":"PR:Q9UTA8"}


id: PBO:0087412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 2 of ubiquinol cytochrome-c reductase (Complex III); Complex III is a component of the mitochondrial inner membrane electron transport chain; phosphorylated; transcription is regulated by Hap1p, Hap2p/Hap3p, and heme","termid":"PBO:0087412"}


id: PBO:0031467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutathione_gamma-glutamylcysteinyltransferase_activity","termid":"PBO:0031467"}


id: PBO:0045213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C6","termid":"PBO:0045213"}


id: PBO:0085470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prephenate dehydrogenase involved in tyrosine biosynthesis; expression is dependent on phenylalanine levels","termid":"PBO:0085470"}


id: PBO:0042885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP298-TCP10L readthrough","termid":"PBO:0042885"}


id: GO:0010423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of brassinosteroids.","definition_xrefs":["PMID:16857903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of brassinosteroid biosynthetic process","termid":"GO:0010422"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone biosynthetic process","termid":"GO:0090032"},{"relation_name":"negatively_regulates","term_name":"brassinosteroid biosynthetic process","termid":"GO:0016132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of brassinosteroid biosynthetic process","termid":"GO:0010423"}


id: PBO:0047686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLRT2 antisense RNA 1","termid":"PBO:0047686"}


id: GO:0048893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an afferent axon in a lateral line nerve over time from its formation to the mature structure. This process includes axonogenesis and pathfinding of the afferent axons in any lateral line nerve.","definition_xrefs":["PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon development","termid":"GO:0061564"},{"relation_name":"part_of","term_name":"lateral line nerve development","termid":"GO:0048892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"afferent axon development in lateral line nerve","termid":"GO:0048893"}


id: PBO:0080783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 3","termid":"PBO:0080783"}


id: PBO:0108880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1 complex Tor2 interacting protein 1","termid":"PBO:0108880"}


id: PBO:0070646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 17","termid":"PBO:0070646"}


id: PBO:0044096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A4","termid":"PBO:0044096"}


id: PBO:0070727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 32","termid":"PBO:0070727"}


id: PBO:0080108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP25 small subunit processome component","termid":"PBO:0080108"}


id: GO:0071211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directing proteins towards the vacuole using signals contained within the protein, occurring as part of autophagy, the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to vacuole","termid":"GO:0006623"},{"relation_name":"part_of","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0044248","GO:0006810","GO:0051179","GO:0006605","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"protein targeting to vacuole involved in autophagy","synonyms":[{"name":"protein targeting to autophagosome","type":"related"}],"termid":"GO:0071211"}


id: PBO:0039934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF38 intronic transcript 1","termid":"PBO:0039934"}


id: GO:0021671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 7 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dgh","GOC:cls","GO_REF:0000021","GOC:jid","GOC:curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 7 development","termid":"GO:0021573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 7 morphogenesis","termid":"GO:0021671"}


id: PBO:0090767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein","termid":"PBO:0090767"}


id: PBO:0062940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase subunit beta","termid":"PBO:0062940"}


id: GO:0044540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cystine + H2O = pyruvate + NH3 + thiocysteine. Thiocysteine is also known as cysteine persulfide.","definition_xrefs":["RHEA:24927","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"L-cystine L-cysteine-lyase (deaminating)","secondary_identifiers":["KEGG_REACTION:R02408","EC:4.4.1.1","EC:4.4.1.35"],"termid":"GO:0044540"}


id: GO:0018527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexylamine + O2 + H2O = cyclohexanone + NH3 + hydrogen peroxide.","definition_xrefs":["RHEA:18433","PMID:18451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary methylamine oxidase activity","termid":"GO:0008131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cyclohexylamine oxidase activity","secondary_identifiers":["MetaCyc:CYCLOHEXYLAMINE-OXIDASE-RXN","EC:1.4.3.12","UM-BBD_reactionID:r0754"],"synonyms":[{"name":"cyclohexylamine:oxygen oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0018527"}


id: PBO:0046560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 2","termid":"PBO:0046560"}


id: PBO:0002506
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.4.11","termid":"PBO:0002506"}


id: FYPO:0004530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial translation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial translation","termid":"FYPO:0004528"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitochondrial translation","synonyms":[{"name":"abolished mitochondrial protein biosynthesis","type":"exact"},{"name":"abolished mitochondrial protein synthesis","type":"exact"},{"name":"abolished mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"abolished mitochondrial translation during vegetative growth","type":"exact"},{"name":"mitochondrial translation abolished","type":"exact"}],"termid":"FYPO:0004530"}


id: PBO:0062957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPC1L2B antisense RNA 1 (head to head)","termid":"PBO:0062957"}


id: PBO:0042074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 144A","termid":"PBO:0042074"}


id: GO:0019429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fluorene, a tricyclic polycyclic aromatic hydrocarbon containing a five-membered ring. It is a major component of fossil fuels and their derivatives and is also a by-product of coal-conversion and energy-related industries. It is commonly found in vehicle exhaust emissions, crude oils, motor oils, coal and oil combustion products, waste incineration, and industrial effluents.","definition_xrefs":["PMID:15317800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"fluorene catabolic process","secondary_identifiers":["MetaCyc:FLUORENE-DEG-9-ONE-PWY","UM-BBD_pathwayID:flu","GO:0018917"],"synonyms":[{"name":"fluorene breakdown","type":"exact"},{"name":"fluorene catabolism","type":"exact"},{"name":"fluorene degradation","type":"exact"},{"name":"fluorene metabolic process","type":"narrow"},{"name":"fluorene metabolism","type":"exact"}],"termid":"GO:0019429"}


id: PR:O13734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sgo2 gene.","definition_xrefs":["UniProtKB:O13734","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shugoshin-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.15","synonyms":[{"name":"Spom972h-sgo2","type":"exact"}],"termid":"PR:O13734"}


id: GO:1900022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of D-erythro-sphingosine kinase activity.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid kinase activity","termid":"GO:0043550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of D-erythro-sphingosine kinase activity","synonyms":[{"name":"regulation of sphingosine kinase activity","type":"exact"}],"termid":"GO:1900022"}


id: PBO:0038799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 5 (pseudogene)","termid":"PBO:0038799"}


id: PBO:0081774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705B","termid":"PBO:0081774"}


id: GO:0000280
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id: PBO:0090857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proline transmembrane transporter Put4","termid":"PBO:0090857"}


id: PBO:0090296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tudor domain and nuclease, Snd1","termid":"PBO:0090296"}


id: PBO:0068885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 126, pseudogene","termid":"PBO:0068885"}


id: FYPO:0002539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm begins later than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein localization to nucleoplasm","termid":"FYPO:0002532"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm during cellular response to hydroxyurea","termid":"FYPO:0002537"},{"relation_name":"is_a","term_name":"delayed onset of protein localization to mitotic spindle","termid":"FYPO:0003226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydroxyurea","synonyms":[{"name":"delayed onset of protein localisation to nucleoplasm during cellular response to hydroxyurea","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to HU","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"delayed protein localization to nucleoplasm during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002539"}


id: PBO:0080305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 69 pseudogene","termid":"PBO:0080305"}


id: GO:0140441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an arachidonoyl (systematic name, (5Z,8Z,11Z,14Z)-eicosatetraenoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction: in the reaction: (5Z,8Z,11Z,14Z)-eicosatetraenoyl-CoA + L-cysteinyl-[protein] = CoA + S-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-L-cysteinyl-[protein].","definition_xrefs":["PMID:22968831","PMID:12681491","PMID:22247542","RHEA:59748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"protein-cysteine S-arachidonoyltransferase activity","termid":"GO:0140441"}


id: GO:0052693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: epoxyqueuosine in tRNA + reductant = queuosine in tRNA + oxidised reductant.","definition_xrefs":["RHEA:32159","PMID:21502530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"epoxyqueuosine reductase activity","secondary_identifiers":["EC:1.17.99.6"],"termid":"GO:0052693"}


id: PATO:0001219
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001219 area_unit (obsolete PATO:0001219)","termid":"PATO:0001219"}


id: PBO:0049296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase kappa 1","termid":"PBO:0049296"}


id: PBO:0113182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-binding ER protein, enriched at nucleus-vacuolar junctions (NVJ); involved in nonvesicular transfer of ceramides from ER to Golgi during ER stress; may be involved in sterol metabolism or signaling at the NVJ; contains a synaptotagmin-like-mitochondrial-lipid binding protein (SMP) domain; binds phosphatidylinositols and other lipids in a large-scale study; may interact with ribosomes, based on co-purification experiments","termid":"PBO:0113182"}


id: PBO:0084478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating type locus; note that the systematic sequence in SGD contains MATalpha sequences","termid":"PBO:0084478"}


id: GO:0061558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a cranial ganglion to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion maturation","termid":"GO:0061553"},{"relation_name":"part_of","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion maturation","synonyms":[{"name":"cranial ganglia maturation","type":"related"}],"termid":"GO:0061558"}


id: GO:0018828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the elimination of HCl from a chloro- or bromopropanol, yielding an epoxypropane.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete halohydrin hydrogen-halide-lyase A activity (obsolete GO:0018828)","termid":"GO:0018828"}


id: PBO:0079238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 12","termid":"PBO:0079238"}


id: SO:0000224
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding phenylalanyl tRNA (SO:0000267).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine_tRNA_primary_transcript","synonyms":[{"name":"phenylalanine tRNA primary transcript","type":"exact"}],"termid":"SO:0000224"}


id: GO:0009673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of phosphate from one side of a membrane to the other. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["TC:2.A.20.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"low-affinity phosphate transmembrane transporter activity","synonyms":[{"name":"low affinity phosphate transmembrane transporter activity","type":"exact"}],"termid":"GO:0009673"}


id: PBO:0109380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 11","termid":"PBO:0109380"}


id: PR:P23566
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.07c","secondary_identifiers":["UniProtKB:P23566"],"synonyms":[{"name":"RAD6 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC18B11.07c","type":"related"},{"name":"Spom972h-UBE2B","type":"exact"},{"name":"ubc2","type":"related"},{"name":"ubiquitin carrier protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P23566"}


id: PBO:0110401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 1 (Er blood group)","termid":"PBO:0110401"}


id: GO:0005544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phospholipid, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"calcium-dependent phospholipid binding","termid":"GO:0005544"}


id: GO:0019057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts translation of mRNA into protein in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host translation","synonyms":[{"name":"host cell protein synthesis shutoff","type":"broad"},{"name":"modification by virus of host cell mRNA translation","type":"narrow"},{"name":"modulation by virus of host translation","type":"narrow"},{"name":"modulation of host translation by virus","type":"narrow"},{"name":"regulation of host mRNA translation","type":"exact"},{"name":"regulation of host translation","type":"exact"},{"name":"viral perturbation of host cell mRNA translation","type":"narrow"}],"termid":"GO:0019057"}


id: PBO:0002728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-HIT protein Hit1 (predicted)","termid":"PBO:0002728"}


id: PBO:0056562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance 9 homologous recombination repair factor","termid":"PBO:0056562"}


id: PBO:0085845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; null mutation suppresses cdc13-1 temperature sensitivity","termid":"PBO:0085845"}


id: PBO:0029676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_morphology_during_vegetative_growth","termid":"PBO:0029676"}


id: PR:G2TRS5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC713.13 gene.","definition_xrefs":["UniProtKB:G2TRS5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C713.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.13","synonyms":[{"name":"Spom972h-SPBC713.13","type":"exact"}],"termid":"PR:G2TRS5"}


id: SO:1000029
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An incomplete chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"deletion","termid":"SO:0000159"},{"relation_name":"is_a","term_name":"intrachromosomal_mutation","termid":"SO:1000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_deletion","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosomal_deletion"],"synonyms":[{"name":"(Drosophila)Df","type":"related"},{"name":"(bacteria)&ampDgr;","type":"related"},{"name":"(fungi)D","type":"related"},{"name":"chromosomal deletion","type":"exact"},{"name":"deficiency","type":"exact"}],"termid":"SO:1000029"}


id: PBO:0086269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein translocase and chaperone required for Complex III assembly; member of the AAA ATPase family; forms a homo-oligomeric complex in the mitochondrial inner membrane that translocates the C-terminal domain of Rip1p from the matrix across the inner membrane and delivers it to an assembly intermediate of respiratory Complex III; also required for assembly of the Qcr10p subunit; mutation is functionally complemented by human homolog BCS1L, linked to neonatal diseases","termid":"PBO:0086269"}


id: GO:2000834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of androgen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"androgen secretion","termid":"GO:0035935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of androgen secretion","termid":"GO:2000834"}


id: PBO:0085684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteolytic activation of Rim101p; part of response to alkaline pH; PalA/AIP1/Alix family member; interaction with the ESCRT-III subunit Snf7p suggests a relationship between pH response and multivesicular body formation","termid":"PBO:0085684"}


id: FYPO:0001712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular coenzyme Q10 level","termid":"FYPO:0006978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"coenzyme Q10 absent from cell","synonyms":[{"name":"UQ-10 absent from cell","type":"exact"},{"name":"coenzyme Q10 absent from cell during mitotic cell cycle","type":"related"},{"name":"coenzyme Q10 absent from cell during vegetative growth","type":"exact"},{"name":"ubiquinone 10 absent from cell","type":"exact"}],"termid":"FYPO:0001712"}


id: GO:0102380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: steviolbioside + UDP-alpha-D-glucose = H+ + rebaudioside B + UDP.","definition_xrefs":["RHEA:61752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"steviolbioside glucosyltransferase activity (rebaudioside B forming)","secondary_identifiers":["MetaCyc:RXN-13516"],"termid":"GO:0102380"}


id: GO:1902948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tau-protein kinase activity.","definition_xrefs":["GOC:sjp","GOC:TermGenie","PMID:15897157","GO_REF:0000059","PMID:22986780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"regulation of tau-protein kinase activity","termid":"GO:1902947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tau-protein kinase activity","synonyms":[{"name":"downregulation of TTK","type":"related"},{"name":"down regulation of CDK5/p23","type":"related"},{"name":"down regulation of GSK","type":"related"},{"name":"down regulation of STK31","type":"related"},{"name":"down regulation of TPK","type":"related"},{"name":"down regulation of TPK I","type":"related"},{"name":"down regulation of TPK II","type":"related"},{"name":"down regulation of TTK","type":"related"},{"name":"down regulation of [Tau protein] kinase activity","type":"exact"},{"name":"down regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"down regulation of cdk5/p20","type":"related"},{"name":"down regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"down regulation of protein tau kinase activity","type":"exact"},{"name":"down regulation of tau kinase activity","type":"exact"},{"name":"down regulation of tau protein kinase activity","type":"exact"},{"name":"down regulation of tau-protein kinase I activity","type":"narrow"},{"name":"down regulation of tau-protein kinase II activity","type":"narrow"},{"name":"down regulation of tau-protein kinase activity","type":"exact"},{"name":"down regulation of tau-tubulin kinase activity","type":"narrow"},{"name":"down-regulation of CDK5/p23","type":"related"},{"name":"down-regulation of GSK","type":"related"},{"name":"down-regulation of STK31","type":"related"},{"name":"down-regulation of TPK","type":"related"},{"name":"down-regulation of TPK I","type":"related"},{"name":"down-regulation of TPK II","type":"related"},{"name":"down-regulation of TTK","type":"related"},{"name":"down-regulation of [Tau protein] kinase activity","type":"exact"},{"name":"down-regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"down-regulation of cdk5/p20","type":"related"},{"name":"down-regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"down-regulation of protein tau kinase activity","type":"exact"},{"name":"down-regulation of tau kinase activity","type":"exact"},{"name":"down-regulation of tau protein kinase activity","type":"exact"},{"name":"down-regulation of tau-protein kinase I activity","type":"narrow"},{"name":"down-regulation of tau-protein kinase II activity","type":"narrow"},{"name":"down-regulation of tau-protein kinase activity","type":"exact"},{"name":"down-regulation of tau-tubulin kinase activity","type":"narrow"},{"name":"downregulation of CDK5/p23","type":"related"},{"name":"downregulation of GSK","type":"related"},{"name":"downregulation of STK31","type":"related"},{"name":"downregulation of TPK","type":"related"},{"name":"downregulation of TPK I","type":"related"},{"name":"downregulation of TPK II","type":"related"},{"name":"downregulation of [Tau protein] kinase activity","type":"exact"},{"name":"downregulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"downregulation of cdk5/p20","type":"related"},{"name":"downregulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"downregulation of protein tau kinase activity","type":"exact"},{"name":"downregulation of tau kinase activity","type":"exact"},{"name":"downregulation of tau protein kinase activity","type":"exact"},{"name":"downregulation of tau-protein kinase I activity","type":"narrow"},{"name":"downregulation of tau-protein kinase II activity","type":"narrow"},{"name":"downregulation of tau-protein kinase activity","type":"exact"},{"name":"downregulation of tau-tubulin kinase activity","type":"narrow"},{"name":"inhibition of CDK5/p23","type":"related"},{"name":"inhibition of GSK","type":"related"},{"name":"inhibition of STK31","type":"related"},{"name":"inhibition of TPK","type":"related"},{"name":"inhibition of TPK I","type":"related"},{"name":"inhibition of TPK II","type":"related"},{"name":"inhibition of TTK","type":"related"},{"name":"inhibition of [Tau protein] kinase activity","type":"narrow"},{"name":"inhibition of brain protein kinase PK40erk activity","type":"narrow"},{"name":"inhibition of cdk5/p20","type":"related"},{"name":"inhibition of glycogen synthase kinase-3beta activity","type":"narrow"},{"name":"inhibition of protein tau kinase activity","type":"narrow"},{"name":"inhibition of tau kinase activity","type":"narrow"},{"name":"inhibition of tau protein kinase activity","type":"narrow"},{"name":"inhibition of tau-protein kinase I activity","type":"narrow"},{"name":"inhibition of tau-protein kinase II activity","type":"narrow"},{"name":"inhibition of tau-protein kinase activity","type":"narrow"},{"name":"inhibition of tau-tubulin kinase activity","type":"narrow"},{"name":"negative regulation of CDK5/p23","type":"related"},{"name":"negative regulation of GSK","type":"related"},{"name":"negative regulation of STK31","type":"related"},{"name":"negative regulation of TPK","type":"related"},{"name":"negative regulation of TPK I","type":"related"},{"name":"negative regulation of TPK II","type":"related"},{"name":"negative regulation of TTK","type":"related"},{"name":"negative regulation of [Tau protein] kinase activity","type":"exact"},{"name":"negative regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"negative regulation of cdk5/p20","type":"related"},{"name":"negative regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"negative regulation of protein tau kinase activity","type":"exact"},{"name":"negative regulation of tau kinase activity","type":"exact"},{"name":"negative regulation of tau protein kinase activity","type":"exact"},{"name":"negative regulation of tau-protein kinase I activity","type":"narrow"},{"name":"negative regulation of tau-protein kinase II activity","type":"narrow"},{"name":"negative regulation of tau-tubulin kinase activity","type":"narrow"}],"termid":"GO:1902948"}


id: PBO:0038298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_sequence","termid":"PBO:0038298"}


id: PBO:0085378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane-associated protein phosphatase; involved in the general stress response and the inactivating dephosphorylation of Mep2p; required along with binding partner Whi2p for full activation of STRE-mediated gene expression, possibly through Msn2p dephosphorylation, and for inhibition of TORC1 in response to limiting amino acids; regulates the sodium ion stress response with Psr2p; member of the HAD family of protein phosphatases","termid":"PBO:0085378"}


id: GO:1905265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of blasticidin S.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","Wikipedia:Blasticidin_S","PMID:23874663","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside catabolic process","termid":"GO:0046135"},{"relation_name":"is_a","term_name":"blasticidin S metabolic process","termid":"GO:1905264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"blasticidin S catabolic process","synonyms":[{"name":"blasticidin S breakdown","type":"exact"},{"name":"blasticidin S catabolism","type":"exact"},{"name":"blasticidin S degradation","type":"exact"}],"termid":"GO:1905265"}


