# terms

id: PBO:0030890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_response_phenotype_during_vegetative_growth","termid":"PBO:0030890"}


id: PBO:0061553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, cytosolic IIIB","termid":"PBO:0061553"}


id: PBO:0113190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysolipid acyltransferase; involved in the synthesis of phosphatidic acid from 1-acyl-2-hydroxy-sn-glycero-3-phosphate using oleoyl-CoA as acyl donor and in phospholipid remodeling, incorporating palmitic acid into the sn-1 position of phosphatidylserine and phosphatidylethanolamine; localizes to ER membranes associated with mitochondria (MAMs); contains three predicted transmembrane domains; similar to C. elegans F55A11.5 and maize 1-acyl-glycerol-3-phosphate acyltransferase","termid":"PBO:0113190"}


id: GO:0045495
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Differentiated cytoplasm associated with a pole (animal, vegetal, anterior, or posterior) of an oocyte, egg or early embryo.","definition_xrefs":["GOC:kmv","PMID:17113380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"pole plasm","synonyms":[{"name":"germ plasm","type":"narrow"},{"name":"polar plasm","type":"exact"}],"termid":"GO:0045495"}


id: PBO:0061005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS like 1","termid":"PBO:0061005"}


id: PBO:0081999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 32","termid":"PBO:0081999"}


id: FYPO:0004904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to centromere central core during vegetative growth","secondary_identifiers":["FYPO:0005224"],"synonyms":[{"name":"decreased protein localisation to centromere central core during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromere central core during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at centromere central core during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome, centric central core","type":"exact"},{"name":"decreased protein localization to chromosome, centromeric central core during vegetative growth","type":"exact"},{"name":"reduced protein localization to centromere central core during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0004904"}


id: PBO:0048905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA7B divergent transcript","termid":"PBO:0048905"}


id: PBO:0027877
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nucleosome_binding","termid":"PBO:0027877"}


id: FYPO:0003690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing glycerol and ethanol as the carbon sources.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth on glycerol/ethanol carbon source","termid":"FYPO:0000442"},{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell population growth on glycerol/ethanol carbon source","synonyms":[{"name":"abolished growth on glycerol/ethanol carbon source","type":"broad"},{"name":"abolished vegetative cell population growth on glycerol/ethanol carbon source","type":"exact"},{"name":"cell population growth on glycerol/ethanol carbon source abolished","type":"exact"}],"termid":"FYPO:0003690"}


id: PBO:0056903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIF antisense RNA 1","termid":"PBO:0056903"}


id: PBO:0047592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen like 1","termid":"PBO:0047592"}


id: GO:0140825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O.","definition_xrefs":["RHEA:56136","PMID:19339248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"lactoperoxidase activity","secondary_identifiers":["MetaCyc:PEROXID-RXN","EC:1.11.1.7"],"synonyms":[{"name":"peroxidase activity","type":"broad"}],"termid":"GO:0140825"}


id: GO:0048775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leucophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"leucophore differentiation","termid":"GO:0048772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leucophore differentiation","termid":"GO:0048775"}


id: PBO:0044079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin pseudogene 1","termid":"PBO:0044079"}


id: GO:0140811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone 2A L-arginyl (position 3)= histone 2A L-citrullyl (position 3) + NH4+, resulting in histone H2A citrullination at position 3.","definition_xrefs":["PMID:15823041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone arginine deiminase activity","termid":"GO:0140794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"histone H2AR3 arginine deiminase activity","synonyms":[{"name":"H2A-R3 citrullination","type":"exact"},{"name":"histone H2A-R3 arginine deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H2A-R3 specific)","type":"exact"}],"termid":"GO:0140811"}


id: PBO:0077859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3","termid":"PBO:0077859"}


id: PBO:0004307
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of chaperonin-containing T-complex","termid":"PBO:0004307"}


id: PBO:0051011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 1 receptor","termid":"PBO:0051011"}


id: PBO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal family","termid":"PBO:0000088"}


id: PBO:0062113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 12","termid":"PBO:0062113"}


id: PBO:0089104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoprotein 3 family Vps74","termid":"PBO:0089104"}


id: PATO:0001156
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001156 relative concentration (obsolete PATO:0001156)","termid":"PATO:0001156"}


id: PBO:0062317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 2","termid":"PBO:0062317"}


id: PBO:0016526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine synthase-like protein Cys12","termid":"PBO:0016526"}


id: GO:1905198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a manchette.","definition_xrefs":["GO_REF:0000079","PMID:24440897","PMID:26792866","PMID:22319670","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"manchette assembly","synonyms":[{"name":"manchette formation","type":"exact"}],"termid":"GO:1905198"}


id: PBO:0061134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME1-NME2 readthrough","termid":"PBO:0061134"}


id: FYPO:0005872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the septum is in two asymmetrically located parts and does not completely bisect the cell. Arises when septum assembly begins at two sites which are not on opposite sides of the medial cortex and terminates prematurely on both sides.","definition_xrefs":["PMID:27898700","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000032"],"is_obsolete":false,"name":"incomplete septum formed from asymmetrically located sites","synonyms":[{"name":"abnormal septum site selection from asymmetrically located sites, forming incomplete septum","type":"related"},{"name":"incomplete division septum formed from asymmetrically located sites","type":"exact"},{"name":"incomplete septum formed from asymmetrically located sites during mitotic cell cycle","type":"related"},{"name":"incomplete septum formed from asymmetrically located sites during vegetative growth","type":"exact"}],"termid":"FYPO:0005872"}


id: PBO:0069951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1244, pseudogene","termid":"PBO:0069951"}


id: PBO:0027098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_at_rDNA_replication_origins","termid":"PBO:0027098"}


id: PATO:0002384
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Presence of long chain aliphatic lipids on the surface of an organism.","definition_xrefs":["PATOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"waxiness","termid":"PATO:0002381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"waxy","termid":"PATO:0002384"}


id: GO:0032788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving saturated monocarboxylic acids, any organic acid containing one carboxyl (COOH) group or anion (COO-) and fully saturated C-C bonds.","definition_xrefs":["GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"saturated monocarboxylic acid metabolic process","synonyms":[{"name":"saturated monocarboxylate metabolic process","type":"exact"},{"name":"saturated monocarboxylic acid metabolism","type":"exact"}],"termid":"GO:0032788"}


id: MOD:00014
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-cysteine.","definition_xrefs":["DeltaMass:0","PubMed:3447159","PubMed:6692818","PubMed:1310545","PubMed:7338899","PubMed:15790858","ChEBI:29950","RESID:AA0005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine residue","synonyms":[{"name":"(2R)-2-amino-3-sulfanylpropanoic acid","type":"exact"},{"name":"(R)-cysteine","type":"exact"},{"name":"2-amino-3-mercaptopropanoic acid","type":"exact"},{"name":"2-amino-3-mercaptopropionic acid","type":"exact"},{"name":"2-azanyl-3-sulfanylpropanoic acid","type":"exact"},{"name":"3-mercapto-L-alanine","type":"exact"},{"name":"Cys","type":"exact"},{"name":"Cysteine (C, Cys)","type":"exact"},{"name":"L-(+)-cysteine","type":"exact"},{"name":"L-cysteine","type":"exact"},{"name":"alpha-amino-beta-mercaptopropanoic acid","type":"exact"},{"name":"alpha-amino-beta-mercaptopropionic acid","type":"exact"},{"name":"alpha-amino-beta-thiolpropionic acid","type":"exact"},{"name":"beta-mercaptoalanine","type":"exact"},{"name":"half-cystine","type":"exact"},{"name":"thioserine","type":"exact"}],"termid":"MOD:00014"}


id: GO:0002561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a basophil.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"part_of","term_name":"basophil activation involved in immune response","termid":"GO:0002276"},{"relation_name":"part_of","term_name":"basophil mediated immunity","termid":"GO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"basophil degranulation","termid":"GO:0002561"}


id: FYECO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glutamate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glutamate","termid":"FYECO:0000084"}


id: GO:0010088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the principal food-conducting tissue of a vascular plant.","definition_xrefs":["ISBN:0471245208","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phloem or xylem histogenesis","termid":"GO:0010087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phloem development","synonyms":[{"name":"phloem histogenesis","type":"exact"}],"termid":"GO:0010088"}


id: PBO:0046770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 10","termid":"PBO:0046770"}


id: PBO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit K (predicted)","termid":"PBO:0001597"}


id: PBO:0046561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 3","termid":"PBO:0046561"}


id: GO:0009231
data:
  {"annotated_genes":["SJAG_01054","SJAG_02360","SJAG_00491","SJAG_04711","SJAG_00376","SJAG_00480","SJAG_04845","SJAG_02491"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83606,97245,102871,103067,106466,110864,111811,113248],"is_not":false,"summary":null,"term":"GO:0009231"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).","definition_xrefs":["GOC:jl","PMID:10940330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"riboflavin metabolic process","termid":"GO:0006771"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"flavin-containing compound biosynthetic process","termid":"GO:0042727"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_01054":null,"SJAG_02360":null,"SJAG_02491":null,"SJAG_04711":null,"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"riboflavin biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RIBOSYN2-PWY","Wikipedia:Riboflavin"],"synonyms":[{"name":"riboflavin anabolism","type":"exact"},{"name":"riboflavin biosynthesis","type":"exact"},{"name":"riboflavin formation","type":"exact"},{"name":"riboflavin synthesis","type":"exact"},{"name":"vitamin B2 biosynthesis","type":"exact"},{"name":"vitamin B2 biosynthetic process","type":"exact"},{"name":"vitamin G biosynthesis","type":"exact"},{"name":"vitamin G biosynthetic process","type":"exact"}],"termid":"GO:0009231","terms_by_termid":{"GO:0009231":null}}


id: PBO:0070743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 13","termid":"PBO:0070743"}


id: PBO:0059628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier 2","termid":"PBO:0059628"}


id: PBO:0041031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic charge Y-linked 2","termid":"PBO:0041031"}


id: MOD:00921
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"New uncategorized Unimod. OBSOLETE because organizational use is no longer required.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00921 new uncategorized Unimod entries (obsolete MOD:00921)","termid":"MOD:00921"}


id: GO:0060857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the glial barrier between the blood and the brain. The glial cells in the brain are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["PMID:20080302","GOC:dph","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"is_a","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of glial blood-brain barrier","synonyms":[{"name":"establishment of glial BBB","type":"exact"},{"name":"establishment of glial blood/brain barrier","type":"exact"}],"termid":"GO:0060857"}


id: PR:000046672
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"The N-terminal portion of transcription factor sre2 (Schizosaccharomyces pombe) that remains after proteolytic cleavage. This portion represents the functionally active part.","definition_xrefs":["PMID:23729666","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor sre2 (Schizosaccharomyces pombe)","termid":"PR:000046670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sre2N","pombase_gene_id":"SPBC354.05c","synonyms":[{"name":"PomBase_original_PRO_term_name: transcription factor sre2, Sre2N form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-sre2/Sre2N","type":"exact"},{"name":"Sre2N","type":"exact"},{"name":"sre2 nuclear (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000046672"}


id: FYPO:0000421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endocytosis does not occur. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased protein level in plasma membrane","termid":"FYPO:0003504"},{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished endocytosis during vegetative growth","synonyms":[{"name":"abolished actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"abolished endocytosis during mitotic cell cycle","type":"related"},{"name":"abolished protein internalization during vegetative growth","type":"narrow"},{"name":"absent endocytosis during vegetative growth","type":"exact"},{"name":"endocytosis abolished during vegetative growth","type":"exact"},{"name":"endocytosis: absent during vegetative growth","type":"related"}],"termid":"FYPO:0000421"}


id: PBO:0040015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 3","termid":"PBO:0040015"}


id: GO:0080044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to the 7-hydroxy group of a quercetin molecule.","definition_xrefs":["PMID:15352060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"quercetin 7-O-glucosyltransferase activity","termid":"GO:0080044"}


id: PBO:0000981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim17 (predicted)","termid":"PBO:0000981"}


id: GO:0046055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dGMP, deoxyguanosine monophosphate (2'-deoxyguanosine 5'-phosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009172"},{"relation_name":"is_a","term_name":"dGMP metabolic process","termid":"GO:0046054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dGMP catabolic process","synonyms":[{"name":"dGMP breakdown","type":"exact"},{"name":"dGMP catabolism","type":"exact"},{"name":"dGMP degradation","type":"exact"}],"termid":"GO:0046055"}


id: GO:0060286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cell motility due to the motion of one or more flagella.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete flagellar cell motility (obsolete GO:0060286)","synonyms":[{"name":"flagellar cell motility","type":"exact"}],"termid":"GO:0060286"}


id: PBO:0039709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A1","termid":"PBO:0039709"}


id: PR:O74539
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mak3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxide stress-activated histidine kinase mak3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.06","synonyms":[{"name":"Spom972h-mak3","type":"exact"},{"name":"his-Asp phosphorelay kinase phk2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mcs4-associated kinase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74539"}


id: GO:1904213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of iodide transmembrane transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20392814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inorganic anion transmembrane transport","termid":"GO:1903796"},{"relation_name":"is_a","term_name":"negative regulation of anion transmembrane transport","termid":"GO:1903960"},{"relation_name":"is_a","term_name":"negative regulation of iodide transport","termid":"GO:1904202"},{"relation_name":"is_a","term_name":"regulation of iodide transmembrane transport","termid":"GO:1904212"},{"relation_name":"negatively_regulates","term_name":"iodide transmembrane transport","termid":"GO:1904200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of iodide transmembrane transport","synonyms":[{"name":"down regulation of iodide transmembrane transport","type":"exact"},{"name":"down-regulation of iodide transmembrane transport","type":"exact"},{"name":"downregulation of iodide transmembrane transport","type":"exact"},{"name":"inhibition of iodide transmembrane transport","type":"narrow"}],"termid":"GO:1904213"}


id: PBO:0088558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class I) H3-K9 specific Clr6","termid":"PBO:0088558"}


id: GO:1901399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of transforming growth factor beta3 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transforming growth factor beta3 activation (obsolete GO:1901399)","synonyms":[{"name":"down regulation of TGF-beta 3 activation","type":"exact"},{"name":"down regulation of TGFB3 activation","type":"exact"},{"name":"down regulation of TGFbeta 3 activation","type":"exact"},{"name":"down regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"down-regulation of TGF-beta 3 activation","type":"exact"},{"name":"down-regulation of TGFB3 activation","type":"exact"},{"name":"down-regulation of TGFbeta 3 activation","type":"exact"},{"name":"down-regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"downregulation of TGF-beta 3 activation","type":"exact"},{"name":"downregulation of TGFB3 activation","type":"exact"},{"name":"downregulation of TGFbeta 3 activation","type":"exact"},{"name":"downregulation of transforming growth factor beta3 activation","type":"exact"},{"name":"inhibition of TGF-beta 3 activation","type":"exact"},{"name":"inhibition of TGFB3 activation","type":"exact"},{"name":"inhibition of TGFbeta 3 activation","type":"exact"},{"name":"inhibition of transforming growth factor beta3 activation","type":"narrow"},{"name":"negative regulation of TGF-beta 3 activation","type":"exact"},{"name":"negative regulation of TGFB3 activation","type":"exact"},{"name":"negative regulation of TGFbeta 3 activation","type":"exact"}],"termid":"GO:1901399"}


id: PBO:0081234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYND-type containing 19","termid":"PBO:0081234"}


id: PBO:0047541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7","termid":"PBO:0047541"}


id: PBO:0089442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane urea transmembrane transporter","termid":"PBO:0089442"}


id: PBO:0030062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_acidic_medium","termid":"PBO:0030062"}


id: PBO:0028426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sodium_fluoride","termid":"PBO:0028426"}


id: PBO:0054368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1762","termid":"PBO:0054368"}


id: PBO:0064620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 6 homeobox 2","termid":"PBO:0064620"}


id: PBO:0003691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp2","termid":"PBO:0003691"}


id: GO:0070631
data:
  {"annotated_genes":["SJAG_05196","SJAG_03200","SJAG_01422","SJAG_04558","SJAG_01460","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99560,98920,86247,107521,96696,108936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140480"},{"annotations":[99561,86248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990608"}]},"cv_name":"biological_process","definition":"Any process in which a spindle pole body is transported to, or maintained in, a specific location. A spindle pole body is a type of microtubule organizing center found in fungal cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular localization","termid":"GO:0051641"},{"relation_name":"is_a","term_name":"microtubule organizing center localization","termid":"GO:0061842"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"spindle pole body localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0071790","GO:1990944"],"synonyms":[{"name":"maintenance of spindle pole body localization","type":"narrow"},{"name":"spindle pole body localisation","type":"exact"}],"termid":"GO:0070631","terms_by_termid":{"GO:0140480":null,"GO:1990608":null}}


id: GO:0004067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-asparagine + H2O = L-aspartate + NH3.","definition_xrefs":["EC:3.5.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"asparaginase activity","secondary_identifiers":["MetaCyc:ASPARAGHYD-RXN","Reactome:R-HSA-6797627","RHEA:21016"],"synonyms":[{"name":"L-asparaginase activity","type":"related"},{"name":"L-asparagine amidohydrolase activity","type":"related"},{"name":"alpha-asparaginase activity","type":"related"},{"name":"asparaginase II","type":"related"},{"name":"colaspase activity","type":"related"},{"name":"crasnitin","type":"related"},{"name":"elspar","type":"related"},{"name":"leunase activity","type":"related"}],"termid":"GO:0004067"}


id: GO:0003273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"endocardial cushion formation","termid":"GO:0003272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in endocardial cushion formation","termid":"GO:0003273"}


id: PR:O94252
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rng9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.02","synonyms":[{"name":"Spom972h-rng9","type":"exact"}],"termid":"PR:O94252"}


id: GO:0010166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving wax, a compound containing C16 and C18 fatty acids.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"wax metabolic process","synonyms":[{"name":"wax metabolism","type":"exact"}],"termid":"GO:0010166"}


id: GO:0100044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates cellular hyperosmotic salinity response.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular hyperosmotic salinity response by transcription from RNA polymerase II promoter (obsolete GO:0100044)","termid":"GO:0100044"}


id: PBO:0013080
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisF","termid":"PBO:0013080"}


id: GO:0009472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c3 (tetraheme) (obsolete GO:0009472)","synonyms":[{"name":"cytochrome c3 (tetraheme)","type":"exact"}],"termid":"GO:0009472"}


id: CHEBI:69136
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latrunculin A","termid":"CHEBI:69136"}


id: FYPO:0009085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of lithium chloride and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to lithium chloride and sodium dodecyl sulfate","synonyms":[{"name":"resistance to lithium chloride and SDS","type":"exact"},{"name":"resistance to lithium chloride and SDS during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and SDS in combination","type":"exact"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to lithium chloride and SDS","type":"exact"},{"name":"resistant to lithium chloride and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009085"}


id: GO:0003057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction","termid":"GO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of heart contraction by chemical signal","synonyms":[{"name":"chemical cardiac inotropy","type":"exact"},{"name":"regulation of the force of heart muscle contraction by chemical signal","type":"related"}],"termid":"GO:0003057"}


id: PBO:0009639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-metabolizing bifunctional protein (predicted)","termid":"PBO:0009639"}


id: GO:0001957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Direct ossification that occurs within mesenchyme or an accumulation of relatively unspecialized cells.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direct ossification","termid":"GO:0036072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intramembranous ossification","secondary_identifiers":["Wikipedia:Intramembranous_ossification"],"synonyms":[{"name":"dermal ossification","type":"narrow"},{"name":"intramembranous bone ossification","type":"related"}],"termid":"GO:0001957"}


id: GO:0061785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An endopeptidase activity that uses peptidoglycan as a substrate.","definition_xrefs":["GOC:dph","PMID:22748813","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"peptidoglycan muralytic activity","termid":"GO:0061783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0008233","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"peptidoglycan endopeptidase activity","termid":"GO:0061785"}


id: PBO:0052282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDM7A divergent transcript","termid":"PBO:0052282"}


id: GO:1904962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicle-mediated and directed movement of substances from plastid to vacuole.","definition_xrefs":["GOC:TermGenie","GO_REF:0000076","PMID:25281689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"},{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"plastid to vacuole vesicle-mediated transport","synonyms":[{"name":"plastid to vacuolar carboxypeptidase Y vesicle-mediated transport","type":"related"}],"termid":"GO:1904962"}


id: PBO:0030310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_in_germinating_spore","termid":"PBO:0030310"}


id: PBO:0017540
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper regulated Meiotic gene","termid":"PBO:0017540"}


id: PBO:0067522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 665, pseudogene","termid":"PBO:0067522"}


id: PBO:0066720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 17","termid":"PBO:0066720"}


id: PBO:0061688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 160","termid":"PBO:0061688"}


id: PBO:0061238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP53 antisense RNA 1","termid":"PBO:0061238"}


id: FYPO:0000193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which a cellular response to osmotic stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"abnormal cellular response to osmotic stress","synonyms":[{"name":"abnormal cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000193"}


id: PR:Q6LA54
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H5.08c gene.","definition_xrefs":["UniProtKB:Q6LA54","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C3H5.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.08c","synonyms":[{"name":"Spom972h-SPAC3H5.08c","type":"exact"}],"termid":"PR:Q6LA54"}


id: GO:0009297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly from its constituent parts of a pilus, a short filamentous structure of bacterial cell, flagella-like in structure and generally present in many copies. Pili are variously involved in transfer of nucleic acids, adherence to surfaces, and formation of pellicles. Is required for bacterial conjugation, or can play a role in adherence to surfaces (when it is called a fimbrium), and in the formation of pellicles.","definition_xrefs":["GOC:tb","GOC:dgh","GOC:mcc2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection assembly","termid":"GO:0030031"},{"relation_name":"is_a","term_name":"pilus organization","termid":"GO:0043711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pilus assembly","synonyms":[{"name":"fimbria assembly","type":"narrow"},{"name":"fimbria biogenesis","type":"related"},{"name":"fimbriae assembly","type":"narrow"},{"name":"fimbriae biogenesis","type":"related"},{"name":"fimbrial assembly","type":"narrow"},{"name":"fimbrium assembly","type":"narrow"},{"name":"fimbrium biogenesis","type":"related"},{"name":"pilus biogenesis","type":"related"},{"name":"pilus formation","type":"exact"}],"termid":"GO:0009297"}


id: GO:1901273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-dehydro-3-deoxy-D-gluconic acid.","definition_xrefs":["GOC:yaf","UniPathway:UPA00856","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"2-dehydro-3-deoxy-D-gluconic acid metabolic process","termid":"GO:1901272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-D-gluconic acid catabolic process","synonyms":[{"name":"2-dehydro-3-deoxy-D-gluconic acid breakdown","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid catabolism","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid degradation","type":"exact"}],"termid":"GO:1901273"}


id: FYPO:0006510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which chromosome structure is abnormal at the telomeric regions. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology","termid":"FYPO:0006508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"abnormal telomere structure","synonyms":[{"name":"abnormal chromosome structure at telomere during vegetative growth","type":"exact"},{"name":"abnormal telomere structure during mitotic cell cycle","type":"related"},{"name":"abnormal telomeric region structure during vegetative growth","type":"exact"}],"termid":"FYPO:0006510"}


id: GO:0047199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-sn-glycero-3-phosphocholine + dolichol = 1-acyl-sn-glycero-3-phosphocholine + acyldolichol.","definition_xrefs":["EC:2.3.1.83","RHEA:19285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphatidylcholine-dolichol O-acyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.83-RXN","KEGG_REACTION:R04227"],"synonyms":[{"name":"3-sn-phosphatidylcholine:dolichol O-acyltransferase activity","type":"related"}],"termid":"GO:0047199"}


id: PBO:0038678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 4","termid":"PBO:0038678"}


id: PBO:0091960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase, type B family protein","termid":"PBO:0091960"}


id: GO:0043969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2B by the addition of an acetyl group.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B acetylation (obsolete GO:0043969)","termid":"GO:0043969"}


id: PBO:0064236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCL2 antisense RNA 1","termid":"PBO:0064236"}


id: PBO:0055863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 10","termid":"PBO:0055863"}


id: GO:0031360
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the thylakoid membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of thylakoid membrane (obsolete GO:0031360)","synonyms":[{"name":"intrinsic to thylakoid membrane","type":"narrow"}],"termid":"GO:0031360"}


id: GO:0050557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deacetylipecoside + H2O = dopamine + secologanin.","definition_xrefs":["RHEA:12296","EC:4.3.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine-lyase activity","termid":"GO:0016843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"deacetylipecoside synthase activity","secondary_identifiers":["MetaCyc:4.3.3.4-RXN","KEGG_REACTION:R05749"],"synonyms":[{"name":"deacetylipecoside dopamine-lyase (secologanin-forming)","type":"related"},{"name":"deacetylipecoside dopamine-lyase activity","type":"related"}],"termid":"GO:0050557"}


id: GO:1901886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-hydroxybenzoyl-CoA.","definition_xrefs":["GOC:TermGenie","PMID:19757094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate catabolic process","termid":"GO:0034031"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate catabolic process","termid":"GO:0034034"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"2-hydroxybenzoyl-CoA metabolic process","termid":"GO:1901885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0055086","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"2-hydroxybenzoyl-CoA catabolic process","synonyms":[{"name":"2-hydroxybenzoyl-CoA breakdown","type":"exact"},{"name":"2-hydroxybenzoyl-CoA catabolism","type":"exact"},{"name":"2-hydroxybenzoyl-CoA degradation","type":"exact"}],"termid":"GO:1901886"}


id: PBO:0027891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_kinetochore_during_meiosis_I","termid":"PBO:0027891"}


id: PBO:0040969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 40","termid":"PBO:0040969"}


id: PBO:0065643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 21","termid":"PBO:0065643"}


id: GO:1904726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of replicative senescence.","definition_xrefs":["PMID:23496142","GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of replicative senescence","termid":"GO:1904726"}


id: PBO:0062544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily I member 3 pseudogene","termid":"PBO:0062544"}


id: PBO:0005110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit (predicted)","termid":"PBO:0005110"}


id: GO:0032740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines.","definition_xrefs":["GOC:add","GOC:mah","PMID:16482511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"positively_regulates","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-17 production","secondary_identifiers":["GO:1905078","GO:0045380"],"synonyms":[{"name":"activation of interleukin-17 production","type":"narrow"},{"name":"positive regulation of CTLA-8 production","type":"exact"},{"name":"positive regulation of Cytotoxic T-lymphocyte-associated antigen 8 production","type":"exact"},{"name":"positive regulation of IL-17 production","type":"exact"},{"name":"positive regulation of interleukin-17 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-17 secretion","type":"narrow"},{"name":"stimulation of interleukin-17 production","type":"narrow"},{"name":"up regulation of interleukin-17 production","type":"exact"},{"name":"up-regulation of interleukin-17 production","type":"exact"},{"name":"upregulation of interleukin-17 production","type":"exact"}],"termid":"GO:0032740"}


id: GO:1900837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ergot alkaloid biosynthetic process","termid":"GO:1900822"},{"relation_name":"regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"regulation of fumigaclavine C anabolism","type":"exact"},{"name":"regulation of fumigaclavine C biosynthesis","type":"exact"},{"name":"regulation of fumigaclavine C formation","type":"exact"},{"name":"regulation of fumigaclavine C synthesis","type":"exact"}],"termid":"GO:1900837"}


id: PR:G2TRU8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf17 gene.","definition_xrefs":["UniProtKB:G2TRU8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.06c","synonyms":[{"name":"Spom972h-wtf17","type":"exact"}],"termid":"PR:G2TRU8"}


id: FYPO:0007669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, has a larger volume than normal, and undergoes one or more rounds of rereplication of the entire genome. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PMID:8121488","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation","termid":"FYPO:0000216"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell","termid":"FYPO:0002377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0000004","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"viable swollen vegetative cell with complete DNA rereplication","synonyms":[{"name":"viable enlarged vegetative cell with complete DNA rereplication","type":"related"},{"name":"viable large vegetative cell with complete DNA rereplication","type":"related"},{"name":"viable swollen cell with complete DNA rereplication during vegetative growth","type":"exact"},{"name":"viable swollen vegetative cell with abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","type":"exact"},{"name":"viable swollen vegetative cell with complete DNA rereplication during mitotic cell cycle","type":"related"},{"name":"viable swollen vegetative cell with increased ploidy","type":"exact"},{"name":"viable vegetative cell with increased cell size and complete DNA rereplication","type":"related"},{"name":"viable vegetative cell with increased cell volume and complete DNA rereplication","type":"exact"}],"termid":"FYPO:0007669"}


id: PR:O94353
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apq12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear membrane organization protein apq12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.04","synonyms":[{"name":"Spom972h-apq12","type":"exact"}],"termid":"PR:O94353"}


id: GO:0045658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neutrophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte differentiation","termid":"GO:0030852"},{"relation_name":"regulates","term_name":"neutrophil differentiation","termid":"GO:0030223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil differentiation","termid":"GO:0045658"}


id: PBO:0043289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 7A","termid":"PBO:0043289"}


id: GO:0019793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of ISG15 (interferon-stimulated gene-15) from one side of the membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ISG15 carrier activity (obsolete GO:0019793)","synonyms":[{"name":"ISG15 carrier activity","type":"exact"},{"name":"interferon-stimulated gene-15 carrier activity","type":"narrow"}],"termid":"GO:0019793"}


id: SO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved sequence (5'-CGNMGATCNTY-3') transcription repressor binding site required for gene repression in the presence of high zinc.","direct_ancestors":[{"relation_name":"is_a","term_name":"zinc_repressed_element","termid":"SO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LOZ1_response_element","synonyms":[{"name":"LRE","type":"related"},{"name":"LRE element","type":"related"},{"name":"Loz1 response element","type":"related"}],"termid":"SO:0002225"}


id: GO:0008985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyruvate + ferricytochrome b1 + H2O = CO2 + acetate + ferrocytochrome b1.","definition_xrefs":["EC:1.2.2.2"],"gene_count":0,"genotype_count":0,"name":"obsolete pyruvate dehydrogenase (cytochrome) activity (obsolete GO:0008985)","synonyms":[{"name":"pyruvate dehydrogenase (cytochrome) activity","type":"exact"},{"name":"pyruvate:ferricytochrome-b1 oxidoreductase activity","type":"related"},{"name":"pyruvate:ubiquinone-8-oxidoreductase activity","type":"related"},{"name":"pyruvic (cytochrome b1) dehydrogenase activity","type":"related"}],"termid":"GO:0008985"}


id: GO:0072635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-31 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","PMID:30328794","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-31 production","secondary_identifiers":["GO:0072636"],"synonyms":[{"name":"IL-31 production","type":"exact"},{"name":"interleukin-31 secretion","type":"narrow"}],"termid":"GO:0072635"}


id: PBO:0030984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_methylation","termid":"PBO:0030984"}


id: GO:0010859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a calcium-dependent cysteine-type endopeptidase, any enzyme that hydrolyzes peptide bonds in polypeptides by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile in a calcium-dependent manner.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase inhibitor activity","termid":"GO:0004869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0140678","GO:0030234","GO:0098772","GO:0004857","GO:0003674"],"is_obsolete":false,"name":"calcium-dependent cysteine-type endopeptidase inhibitor activity","termid":"GO:0010859"}


id: PBO:0002138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan Slt1","termid":"PBO:0002138"}


id: PBO:0068152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 459","termid":"PBO:0068152"}


id: PBO:0015687
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-terminal fragment of Rec8 generated by separase-mediated cleavage is an endogenous substrate of the N-end rule pathway","termid":"PBO:0015687"}


id: PBO:0003036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine racemase Alr2 (predicted)","termid":"PBO:0003036"}


id: PBO:0005210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase Lig4","termid":"PBO:0005210"}


id: FYPO:0006228
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the plasma membrane potential, i.e. the electric potential existing across the plasma membrane, is greater than normal.","definition_xrefs":["PMID:16164595","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane potential","termid":"FYPO:0006227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased plasma membrane potential","synonyms":[{"name":"hyperpolarized plasma membrane","type":"exact"},{"name":"increased plasma membrane polarization","type":"exact"},{"name":"increased plasma membrane potential during mitotic cell cycle","type":"related"},{"name":"increased plasma membrane potential during vegetative growth","type":"exact"},{"name":"plasma membrane hyperpolarization","type":"exact"}],"termid":"FYPO:0006228"}


id: GO:0060185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The opening and spreading out of the outer ear.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"outer ear morphogenesis","termid":"GO:0042473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer ear unfolding","termid":"GO:0060185"}


id: GO:0150035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trans-synaptic signaling by BDNF, modulating synaptic transmission.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:19448629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"trans-synaptic signaling by BDNF, modulating synaptic transmission","termid":"GO:0099183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of trans-synaptic signaling by BDNF, modulating synaptic transmission","termid":"GO:0150035"}


id: PBO:0076599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 21","termid":"PBO:0076599"}


id: GO:0070276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any halogen, elements of Group VII; includes metabolism of halogen-containing compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"halogen metabolic process","synonyms":[{"name":"halogen metabolism","type":"exact"}],"termid":"GO:0070276"}


id: PBO:0031080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoskeleton_organization_phenotype","termid":"PBO:0031080"}


id: GO:0039555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of MDA-5 (also known as IFIH1) by binding to MDA-5 itself. For example, direct binding of viral proteins to the host MDA-5 protein can inhibit interaction of MDA-5 with MAVS, its downstream signaling effector.","definition_xrefs":["VZ:603","PMID:19019954"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host MDA-5 activity via MDA-5 binding (obsolete GO:0039555)","synonyms":[{"name":"suppression by virus of host MDA5 activity by MDA-5 binding","type":"exact"}],"termid":"GO:0039555"}


id: PBO:0091856
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the Scp1 C-terminal domain forms a dimer of dimers","termid":"PBO:0091856"}


id: FYPO:0005833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cell tip is decreased. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"},{"relation_name":"is_a","term_name":"decreased protein transport along microtubule during vegetative growth","termid":"FYPO:0005494"},{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule to cell tip during vegetative growth","termid":"FYPO:0005831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein transport along microtubule to cell tip during vegetative growth","synonyms":[{"name":"decreased protein movement along microtubule to cell tip during vegetative growth","type":"exact"},{"name":"decreased protein transport during mitotic cell cycle","type":"related"},{"name":"reduced protein transport along microtubule to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005833"}


id: FYPO:0005220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein oligomerization is abnormal.","definition_xrefs":["GO:0051259","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein oligomerization","synonyms":[{"name":"abnormal protein oligomerisation","type":"exact"},{"name":"abnormal protein oligomerization during mitotic cell cycle","type":"related"},{"name":"abnormal protein oligomerization during vegetative growth","type":"exact"}],"termid":"FYPO:0005220"}


id: PBO:0059875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 12","termid":"PBO:0059875"}


id: SO:0002002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mating type region motif, one of two segments of homology found at all three mating loci (HML, MAT, and HMR).","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Z1_region","synonyms":[{"name":"Z1-region","type":"exact"}],"termid":"SO:0002002"}


id: PBO:0046843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 6","termid":"PBO:0046843"}


id: PBO:0010274
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculomotor apraxia 1","termid":"PBO:0010274"}


id: GO:1903637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein insertion into mitochondrial outer membrane.","definition_xrefs":["GOC:TermGenie","PMID:16374546","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"negative regulation of protein targeting to mitochondrion","termid":"GO:1903215"},{"relation_name":"is_a","term_name":"regulation of protein insertion into mitochondrial outer membrane","termid":"GO:1903636"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"protein insertion into mitochondrial outer membrane","termid":"GO:0045040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0007005","GO:0006810","GO:0006605","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of protein insertion into mitochondrial outer membrane","synonyms":[{"name":"down regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"down regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"down regulation of protein insertion into mitochondrial outer membrane","type":"exact"},{"name":"down regulation of protein transport into mitochondrial outer membrane","type":"exact"},{"name":"down-regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"down-regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"down-regulation of protein insertion into mitochondrial outer membrane","type":"exact"},{"name":"down-regulation of protein transport into mitochondrial outer membrane","type":"exact"},{"name":"downregulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"downregulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"downregulation of protein insertion into mitochondrial outer membrane","type":"exact"},{"name":"downregulation of protein transport into mitochondrial outer membrane","type":"exact"},{"name":"inhibition of mitochondrial outer membrane protein import","type":"narrow"},{"name":"inhibition of protein import into mitochondrial outer membrane","type":"narrow"},{"name":"inhibition of protein insertion into mitochondrial outer membrane","type":"narrow"},{"name":"inhibition of protein transport into mitochondrial outer membrane","type":"narrow"},{"name":"negative regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"negative regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"negative regulation of protein transport into mitochondrial outer membrane","type":"exact"}],"termid":"GO:1903637"}


id: PBO:0064650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA1 pseudogene 1","termid":"PBO:0064650"}


id: PBO:0018006
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc6 does not bind directly to Pcn1 (PCNA)","termid":"PBO:0018006"}


id: GO:1901045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oviposition.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of egg-laying behavior","termid":"GO:0046662"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"egg-laying behavior","termid":"GO:0018991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of egg-laying behavior","synonyms":[{"name":"down regulation of egg laying","type":"broad"},{"name":"down regulation of egg-laying","type":"broad"},{"name":"down regulation of oviposition","type":"exact"},{"name":"down-regulation of egg laying","type":"broad"},{"name":"down-regulation of egg-laying","type":"broad"},{"name":"down-regulation of oviposition","type":"exact"},{"name":"downregulation of egg laying","type":"broad"},{"name":"downregulation of egg-laying","type":"broad"},{"name":"downregulation of oviposition","type":"exact"},{"name":"inhibition of egg laying","type":"broad"},{"name":"inhibition of egg-laying","type":"broad"},{"name":"inhibition of oviposition","type":"narrow"},{"name":"negative regulation of egg laying","type":"broad"},{"name":"negative regulation of egg-laying","type":"broad"},{"name":"negative regulation of oviposition","type":"exact"}],"termid":"GO:1901045"}


id: PBO:0088297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triglyceride lipase-cholesterol esterase","termid":"PBO:0088297"}


id: GO:0080122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of AMP, adenosine monophosphate, from one side of a membrane to the other.","definition_xrefs":["PMID:18923018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transmembrane transporter activity","termid":"GO:0000295"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"AMP transmembrane transporter activity","synonyms":[{"name":"adenosine monophosphate transmembrane transporter activity","type":"exact"}],"termid":"GO:0080122"}


id: GO:0009751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to salicylic acid","synonyms":[{"name":"response to salicylate","type":"exact"},{"name":"response to salicylic acid stimulus","type":"exact"}],"termid":"GO:0009751"}


id: FYPO:0001384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a protein kinase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal protein kinase activity","termid":"FYPO:0001381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished protein kinase activity","synonyms":[{"name":"protein kinase activity abolished","type":"exact"}],"termid":"FYPO:0001384"}


id: GO:0033251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a cephalosporin + H2O = a substituted beta-amino acid derivative of the cephalosporin.","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete cephalosporinase activity (obsolete GO:0033251)","termid":"GO:0033251"}


id: GO:0007140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the male germline.","definition_xrefs":["GOC:vw","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear division","termid":"GO:0140013"},{"relation_name":"part_of","term_name":"male gamete generation","termid":"GO:0048232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"male meiotic nuclear division","synonyms":[{"name":"male meiosis","type":"related"},{"name":"male nuclear division","type":"broad"}],"termid":"GO:0007140"}


id: PBO:0034214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_activates","termid":"PBO:0034214"}


id: PBO:0079440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tu translation elongation factor, mitochondrial pseudogene 1","termid":"PBO:0079440"}


id: GO:0016723
data:
  {"annotated_genes":["SJAG_04042","SJAG_04459","SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86146,98829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030586"},{"annotations":[99893,108890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052851"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction in which the metal ion is reduced and NAD+ or NADP+ acts as an electron acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions","termid":"GO:0016722"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04042":null,"SJAG_04459":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-917811","EC:1.16.1.-"],"synonyms":[{"name":"oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor","type":"related"},{"name":"oxidoreductase activity, reducing metal ions, NAD or NADP as acceptor","type":"related"}],"termid":"GO:0016723","terms_by_termid":{"GO:0030586":null,"GO:0052851":null}}


id: FYPO:0000279
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A sporulation phenotype in which azygotic asci form following conjugation and subsequent sporulation. Azygotic ascus formation occurs when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PMID:18780734","PMID:16169489","PomBase:mah","PMID:20404563"],"gene_count":0,"genotype_count":0,"name":"obsolete formation of azygotic ascus upon sporulation (obsolete FYPO:0000279)","synonyms":[{"name":"abnormal sporulation resulting in formation of azygotic asci","type":"exact"},{"name":"formation of azygotic asci upon sporulation","type":"exact"},{"name":"sporulation defects, azygotic asci","type":"exact"}],"termid":"FYPO:0000279"}


id: PATO:0000027
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000027 electrolyte composition (obsolete PATO:0000027)","termid":"PATO:0000027"}


id: GO:0106114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cohesin dsDNA (leading strand) loading.","definition_xrefs":["PMID:29358048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cohesin loading","termid":"GO:1905405"},{"relation_name":"regulates","term_name":"mitotic cohesin dsDNA (leading strand) loading","termid":"GO:0062021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic cohesin dsDNA (leading strand) loading","termid":"GO:0106114"}


id: PBO:0111522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 2","termid":"PBO:0111522"}


id: PBO:0088784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA translocase Rdh54","termid":"PBO:0088784"}


id: PBO:0089852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery protein Mms19","termid":"PBO:0089852"}


id: PBO:0038414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_transports_or_maintains_localization_of","termid":"PBO:0038414"}


id: PBO:0077104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMM9 pseudogene 2","termid":"PBO:0077104"}


id: MOD:00751
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleic acid linked residue","synonyms":[{"name":"RNARes","type":"exact"}],"termid":"MOD:00751"}


id: PBO:0087189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase subunit ABC23; common to RNA polymerases I, II, and III; part of central core; similar to bacterial omega subunit","termid":"PBO:0087189"}


id: SO:0001873
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A rearrangement breakpoint between two different chromosomes.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interchromosomal_breakpoint","synonyms":[{"name":"interchromosomal breakpoint","type":"exact"}],"termid":"SO:0001873"}


id: PBO:0058085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4302","termid":"PBO:0058085"}


id: GO:0031644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a neurophysiological process, an organ system process carried out by any of the organs or tissues of the nervous system.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nervous system process","synonyms":[{"name":"regulation of neurological process","type":"exact"},{"name":"regulation of neurological system process","type":"exact"},{"name":"regulation of neurophysiological process","type":"exact"}],"termid":"GO:0031644"}


id: FYPO:0001935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of proton-transporting ATP synthase activity by a rotational mechanism is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abnormal proton transport","termid":"FYPO:0005971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0002114","FYPO:0001985","FYPO:0000138","FYPO:0000654","FYPO:0000661","FYPO:0005447","FYPO:0000002","FYPO:0000707"],"is_obsolete":false,"name":"abnormal proton-transporting ATP synthase activity, rotational mechanism","synonyms":[{"name":"abnormal hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"abnormal mitochondrial proton-transporting ATP synthase activity","type":"narrow"},{"name":"abnormal proton-transporting ATP synthase activity","type":"related"}],"termid":"FYPO:0001935"}


id: PBO:0109649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XG Y-linked 2 (pseudogene)","termid":"PBO:0109649"}


id: _global:acts_upstream_of,_negative_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c 'acts upstream of, negative effect' p if c is enables f, and f is causally upstream of p, and the direction of f is negative","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"acts_upstream_of_or_within,_negative_effect","termid":"_global:acts_upstream_of_or_within,_negative_effect"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of,_negative_effect","secondary_identifiers":["RO:0004035"],"termid":"_global:acts_upstream_of,_negative_effect"}


id: GO:0009352
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Complex that possesses dihydrolipoyl dehydrogenase activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoyl dehydrogenase complex (obsolete GO:0009352)","synonyms":[{"name":"dihydrolipoamide dehydrogenase complex","type":"exact"},{"name":"dihydrolipoyl dehydrogenase complex","type":"exact"}],"termid":"GO:0009352"}


id: PBO:0056840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT4 family member E, pseudogene","termid":"PBO:0056840"}


id: PATO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's movement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"movement behavioral quality","synonyms":[{"name":"movement behavioural quality","type":"exact"}],"termid":"PATO:0002076"}


id: PBO:0072905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory carrier membrane protein 3","termid":"PBO:0072905"}


id: PBO:0042730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein I","termid":"PBO:0042730"}


id: PBO:0071798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P RNA component H1, 2 pseudogene","termid":"PBO:0071798"}


id: PBO:0030993
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_salt_stress","termid":"PBO:0030993"}


id: PBO:0053377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 303","termid":"PBO:0053377"}


id: PBO:0054409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1805","termid":"PBO:0054409"}


id: PBO:0072674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTRAF pseudogene 1","termid":"PBO:0072674"}


id: PBO:0064221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C delta 3","termid":"PBO:0064221"}


id: PBO:0003725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp38 (predicted)","termid":"PBO:0003725"}


id: GO:0000023
data:
  {"annotated_genes":["SJAG_02131","SJAG_03824"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97694,97693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the disaccharide maltose (4-O-alpha-D-glucopyranosyl-D-glucopyranose), an intermediate in the catabolism of glycogen and starch.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"maltose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"malt sugar metabolic process","type":"exact"},{"name":"malt sugar metabolism","type":"exact"},{"name":"maltose metabolism","type":"exact"}],"termid":"GO:0000023","terms_by_termid":{"GO:0000025":null}}


id: FYPO:0005174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of uracil into the cell does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal uracil import","termid":"FYPO:0005170"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished uracil import","synonyms":[{"name":"abolished uracil import across plasma membrane","type":"exact"},{"name":"abolished uracil import during mitotic cell cycle","type":"related"},{"name":"abolished uracil import during vegetative growth","type":"exact"},{"name":"abolished uracil import into cell","type":"exact"},{"name":"abolished uracil uptake","type":"exact"},{"name":"uracil import abolished","type":"exact"}],"termid":"FYPO:0005174"}


id: PBO:0050950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha and beta receptor subunit 2","termid":"PBO:0050950"}


id: GO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the budding yeast plasma membrane where a daughter cell will emerge. The yeast marks this spot with bud-site selection proteins before bud emergence occurs. Actin is polarized to this spot just prior to and during bud emergence.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"incipient cellular bud site","termid":"GO:0000131"}


id: FYPO:0004247
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the fungal-type vacuole is normal (i.e. indistinguishable from wild type)..","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuolar morphology during vegetative growth","synonyms":[{"name":"normal vacuolar morphology during mitotic cell cycle","type":"related"},{"name":"normal vacuole morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0004247"}


id: GO:2000381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesoderm development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of mesoderm development","termid":"GO:2000380"},{"relation_name":"negatively_regulates","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesoderm development","termid":"GO:2000381"}


id: PATO:0002513
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's having a slanting direction (neither perpendicular nor parallel) relative to another entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblique to","termid":"PATO:0002513"}


id: PATO:0000730
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000730 relative function value (obsolete PATO:0000730)","termid":"PATO:0000730"}


id: PBO:0038917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F5 pseudogene 1","termid":"PBO:0038917"}


id: GO:1905662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomerase RNA reverse transcriptase activity.","definition_xrefs":["GOC:TermGenie","PMID:22633954","GO_REF:0000059","GOC:BHF_telomere","GOC:nc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomerase activity","termid":"GO:0051974"},{"relation_name":"is_a","term_name":"regulation of telomerase RNA reverse transcriptase activity","termid":"GO:1905661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomerase RNA reverse transcriptase activity","synonyms":[{"name":"down regulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"down regulation of telomerase, catalyst","type":"exact"},{"name":"down-regulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"down-regulation of telomerase, catalyst","type":"exact"},{"name":"downregulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"downregulation of telomerase, catalyst","type":"exact"},{"name":"inhibition of telomerase RNA reverse transcriptase activity","type":"narrow"},{"name":"inhibition of telomerase, catalyst","type":"narrow"},{"name":"negative regulation of telomerase, catalyst","type":"exact"}],"termid":"GO:1905662"}


id: GO:0032121
data:
  {"annotated_genes":["SJAG_03287","SJAG_03092","SJAG_05260","SJAG_05196","SJAG_01777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83537,85886,96015,98919,101181],"is_not":false,"summary":null,"term":"GO:0032121"}]},"cv_name":"biological_process","definition":"The meiotic cell cycle process in which physical connections are formed between telomeric heterochromatin and the spindle pole body, facilitating bouquet formation.","definition_xrefs":["PMID:16615890","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic telomere clustering","termid":"GO:0045141"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01777":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_05196":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"meiotic attachment of telomeric heterochromatin to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of telomeres to spindle pole body","type":"broad"},{"name":"attachment of telomeric chromatin to spindle pole body","type":"broad"}],"termid":"GO:0032121","terms_by_termid":{"GO:0032121":null}}


id: GO:0016500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a protein hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"protein-hormone receptor activity","termid":"GO:0016500"}


id: GO:0060714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the labyrinthine layer of the placenta.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"labyrinthine layer morphogenesis","termid":"GO:0060713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labyrinthine layer formation","termid":"GO:0060714"}


id: GO:0090259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of retinal ganglion cell axon guidance, the process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:tb","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"retinal ganglion cell axon guidance","termid":"GO:0031290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal ganglion cell axon guidance","termid":"GO:0090259"}


id: GO:2000958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of cyclodextrin metabolic process","termid":"GO:2000955"},{"relation_name":"is_a","term_name":"regulation of cyclodextrin catabolic process","termid":"GO:2000957"},{"relation_name":"negatively_regulates","term_name":"cyclodextrin catabolic process","termid":"GO:2000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of cyclodextrin catabolic process","synonyms":[{"name":"negative regulation of cyclodextrin catabolism","type":"exact"}],"termid":"GO:2000958"}


id: GO:1902629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any regulation of mRNA stability that is involved in cellular response to UV.","definition_xrefs":["PMID:10954610","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"part_of","term_name":"cellular response to UV","termid":"GO:0034644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"regulation of mRNA stability involved in cellular response to UV","synonyms":[{"name":"regulation of mRNA stability involved in cellular response to UV light stimulus","type":"exact"},{"name":"regulation of mRNA stability involved in cellular response to UV radiation stimulus","type":"exact"},{"name":"regulation of mRNA stability involved in cellular response to ultraviolet light stimulus","type":"exact"},{"name":"regulation of mRNA stability involved in cellular response to ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:1902629"}


id: PBO:0070520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 19","termid":"PBO:0070520"}


id: GO:1901657
data:
  {"annotated_genes":["SJAG_00885","SJAG_01859","SJAG_03881","SJAG_03213","SJAG_05029","SJAG_04265","SJAG_00694","SJAG_00957","SJAG_00134","SJAG_04264","SJAG_01673","SJAG_04693","SJAG_04927","SJAG_01359","SJAG_01070","SJAG_01261","SJAG_00044","SJAG_02959","SJAG_05334","SJAG_03771","SJAG_02582","SJAG_04735","SJAG_02580","SJAG_02179","SJAG_06634","SJAG_01781","SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[83717,83718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[86656,109801,109802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046085"},{"annotations":[112928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[85316,104468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[104592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[104593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[109190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[104594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[94688,94689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043174"},{"annotations":[87175,108266,86766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[103354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042278"},{"annotations":[89858,111925,89636,85898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[86767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[101579,103356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006213"},{"annotations":[109915,93847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[108007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"},{"annotations":[102011,90803,109919,94179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosyl compound.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_00885":null,"SJAG_00957":null,"SJAG_01070":null,"SJAG_01261":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null,"SJAG_03096":null,"SJAG_03213":null,"SJAG_03771":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_04265":null,"SJAG_04693":null,"SJAG_04735":null,"SJAG_04927":null,"SJAG_05029":null,"SJAG_05334":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosyl compound metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycosyl compound metabolism","type":"exact"}],"termid":"GO:1901657","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0006213":null,"GO:0009972":null,"GO:0031591":null,"GO:0042278":null,"GO:0043097":null,"GO:0043174":null,"GO:0046085":null,"GO:0046086":null,"GO:0046132":null,"GO:0046135":null,"GO:0046495":null,"GO:0071590":null,"GO:0071592":null}}


id: GO:0097726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a LEM domain. The LEM domain (for lamina-associated polypeptide, emerin, MAN1 domain) is present in a group of nuclear proteins that bind chromatin through interaction of the LEM motif with the conserved DNA crosslinking protein, barrier-to-autointegration factor (BAF).","definition_xrefs":["InterPro:IPR003887","GOC:rz","PMID:22399800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"LEM domain binding","synonyms":[{"name":"LAP2, emerin, MAN1 domain binding","type":"exact"},{"name":"lamina-associated polypeptide, emerin, MAN1 domain binding","type":"exact"}],"termid":"GO:0097726"}


id: GO:0140021
data:
  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106985],"is_not":false,"summary":null,"term":"GO:0140021"}]},"cv_name":"biological_process","definition":"The process in which ADP is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:2541251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP transport","termid":"GO:0015866"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrial ADP transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140021","terms_by_termid":{"GO:0140021":null}}


id: GO:0047959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + H2O + 2 ferricytochrome c = glyoxylate + NH3 + 2 ferrocytochrome c.","definition_xrefs":["EC:1.4.2.1","MetaCyc:GLYCINE-DEHYDROGENASE-CYTOCHROME-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, cytochrome as acceptor","termid":"GO:0016640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycine dehydrogenase (cytochrome) activity","secondary_identifiers":["RHEA:16909"],"synonyms":[{"name":"glycine-cytochrome c reductase activity","type":"related"},{"name":"glycine:ferricytochrome-c oxidoreductase (deaminating)","type":"related"},{"name":"reductase, glycine-cytochrome c","type":"related"}],"termid":"GO:0047959"}


id: PBO:0091669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DUF1772 family protein, multimembrane spanning anthrone oxygenase-like","termid":"PBO:0091669"}


id: GO:0008293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to torso (a receptor tyrosine kinase) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:go_curators","PMID:8343949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"torso signaling pathway","synonyms":[{"name":"torso signalling pathway","type":"exact"}],"termid":"GO:0008293"}


id: GO:0120155
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A trimeric complex involved in cytokinesis. Proposed to bridge actomyosin ring contraction and septum synthesis in yeast, resulting in the coordination of these processes, and leading to plasma membrane ingression and fusion. In the yeast Saccharomyces cerevisiae this complex consists of Mlc1p, Iqg1p and Hof1p proteins.","definition_xrefs":["PMID:24413167","GOC:rn","PMID:24895401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cellular bud neck","termid":"GO:0005935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MIH complex","synonyms":[{"name":"Mlc1p-Iqg1p-Hof1p complex","type":"exact"}],"termid":"GO:0120155"}


id: SO:0001653
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcription factor binding site of variable direct repeats of the sequence PuGGTCA spaced by five nucleotides (DR5) found in the promoters of retinoic acid-responsive genes, to which retinoic acid receptors bind.","definition_xrefs":["PMID:11327309","PMID:19917671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TF_binding_site","termid":"SO:0000235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic_acid_responsive_element","synonyms":[{"name":"RARE","type":"exact"},{"name":"retinoic acid responsive element","type":"exact"}],"termid":"SO:0001653"}


id: PBO:0055258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2685","termid":"PBO:0055258"}


id: GO:1904413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac ventricle development.","definition_xrefs":["GO_REF:0000058","PMID:19590510","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of cardiac ventricle development","termid":"GO:1904412"},{"relation_name":"negatively_regulates","term_name":"cardiac ventricle development","termid":"GO:0003231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac ventricle development","synonyms":[{"name":"down regulation of cardiac ventricle development","type":"exact"},{"name":"down-regulation of cardiac ventricle development","type":"exact"},{"name":"downregulation of cardiac ventricle development","type":"exact"},{"name":"inhibition of cardiac ventricle development","type":"narrow"}],"termid":"GO:1904413"}


id: GO:0100005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates ethanol catabolic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ethanol catabolic process by transcription from RNA polymerase II promoter (obsolete GO:0100005)","termid":"GO:0100005"}


id: PBO:0027313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_template_switch-mediated_chromosomal_rearrangement_during_replication_fork_processing","termid":"PBO:0027313"}


id: PBO:0046139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 2","termid":"PBO:0046139"}


id: GO:0031283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of guanylate cyclase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cyclase activity","termid":"GO:0031280"},{"relation_name":"is_a","term_name":"regulation of guanylate cyclase activity","termid":"GO:0031282"},{"relation_name":"is_a","term_name":"negative regulation of lyase activity","termid":"GO:0051350"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"negative regulation of guanylate cyclase activity","synonyms":[{"name":"down regulation of guanylate cyclase activity","type":"exact"},{"name":"down-regulation of guanylate cyclase activity","type":"exact"},{"name":"downregulation of guanylate cyclase activity","type":"exact"},{"name":"inhibition of guanylate cyclase activity","type":"narrow"}],"termid":"GO:0031283"}


id: GO:1901314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2A K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2A K63-linked ubiquitination (obsolete GO:1901314)","termid":"GO:1901314"}


id: GO:0030504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of inorganic diphosphate across a membrane.","definition_xrefs":["PMID:11326272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"inorganic diphosphate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5226964"],"synonyms":[{"name":"inorganic pyrophosphate transporter activity","type":"exact"}],"termid":"GO:0030504"}


id: FYPO:0006065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septin ring disassembly begins later than normal.","definition_xrefs":["PomBase:mah","PMID:15385632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septin ring disassembly during vegetative growth","termid":"FYPO:0006064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of septin ring disassembly during vegetative growth","synonyms":[{"name":"delayed onset of septin ring disassembly during mitotic cell cycle","type":"related"},{"name":"delayed septin ring disassembly during vegetative growth","type":"exact"}],"termid":"FYPO:0006065"}


id: PBO:0067549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 698, pseudogene","termid":"PBO:0067549"}


id: GO:1990050
data:
  {"annotated_genes":["SJAG_00576","SJAG_06440","SJAG_00230"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97383,98319,105605],"is_not":false,"summary":null,"term":"GO:1990050"}]},"cv_name":"molecular_function","definition":"Removes a phosphatidic acid from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle. Phosphatidic acid refers to a glycophospholipids with, in general, a saturated fatty acid bonded to carbon-1, an unsaturated fatty acid bonded to carbon-2, and a phosphate group bonded to carbon-3.","definition_xrefs":["PMID:23042293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0120013","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"phosphatidic acid transfer activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intermembrane PA transfer activity","type":"exact"},{"name":"intermembrane phosphatidic acid transfer activity","type":"narrow"},{"name":"phosphatidic acid carrier activity","type":"exact"},{"name":"phosphatidic acid transporter activity","type":"broad"}],"termid":"GO:1990050","terms_by_termid":{"GO:1990050":null}}


id: PBO:0044458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 44, pseudogene","termid":"PBO:0044458"}


id: PBO:0058922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7b","termid":"PBO:0058922"}


id: PBO:0082877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPA1 uORF; Arginine attenuator peptide, regulates translation of the CPA1 mRNA","termid":"PBO:0082877"}


id: FYPO:0002478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable and is curved along the long axis, and in which vacuoles are more visible (usually by microscopy) than normal. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"viable curved vegetative cell","termid":"FYPO:0002112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"viable curved vacuolated vegetative cell","synonyms":[{"name":"curved vacuolated viable cell","type":"exact"},{"name":"viable curved vacuolated cell during vegetative growth","type":"exact"},{"name":"viable curved vacuolated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002478"}


id: PBO:0087000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-family GTPase interacting protein and Cdc42p effector; required with Gic1p for cell polarity establishment and initiation of budding; involved in recruitment of septins to the presumptive bud site; interacts with Cdc42p via the Cdc42/Rac-interactive binding (CRIB) domain and with PI(4,5)P2 via a polybasic region; gic1 gic2 double mutants are defective for polarizing Cdc42p at elevated temperature, so may function both up- and downstream of Cdc42p; regulates mitotic exit","termid":"PBO:0087000"}


id: GO:0018928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methyl ethyl ketone, a clear, colorless liquid with a fragrant, mint-like odor. It is used as a solvent and in making plastics, textiles and paints.","definition_xrefs":["UM-BBD_pathwayID:mek"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methyl ethyl ketone metabolic process","synonyms":[{"name":"2-butanone metabolic process","type":"exact"},{"name":"2-butanone metabolism","type":"exact"},{"name":"MEK metabolic process","type":"exact"},{"name":"MEK metabolism","type":"exact"},{"name":"methyl ethyl ketone metabolism","type":"exact"}],"termid":"GO:0018928"}


id: PBO:0078300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-5","termid":"PBO:0078300"}


id: GO:0106396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of R7 cell fate commitment.","definition_xrefs":["PMID:22878552","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"regulates","term_name":"R7 cell fate commitment","termid":"GO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of R7 cell fate commitment","termid":"GO:0106396"}


id: GO:0019203
data:
  {"annotated_genes":["SJAG_01427","SJAG_00129","SJAG_02713","SJAG_05314","SJAG_00685","SJAG_01531","SJAG_00039","SJAG_00182","SJAG_01862","SJAG_01646"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85815,85101,75003,96044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004331"},{"annotations":[97161,89440,93255,73443,87953,92633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004805"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: carbohydrate phosphate + H2O = carbohydrate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00129":null,"SJAG_00182":null,"SJAG_00685":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02713":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"carbohydrate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3781018","Reactome:R-HSA-3791349","Reactome:R-HSA-3781011"],"termid":"GO:0019203","terms_by_termid":{"GO:0004331":null,"GO:0004805":null}}


id: GO:0018141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl lysine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0245"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-lysine thiazolecarboxylic acid (obsolete GO:0018141)","termid":"GO:0018141"}


id: PBO:0029801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-misoriented_actin_cables","termid":"PBO:0029801"}


id: SO:0000550
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structural variation whereby either a chromosome exists in addition to the normal chromosome complement or is lacking.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneuploid_chromosome","synonyms":[{"name":"aneuploid chromosome","type":"exact"}],"termid":"SO:0000550"}


id: PBO:0048170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2E3 pseudogene 1","termid":"PBO:0048170"}


id: GO:2001068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to arabinoxylan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan binding","termid":"GO:2001062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"arabinoxylan binding","termid":"GO:2001068"}


id: RO:0002634
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoparasite_of","synonyms":[{"name":"lives inside of","type":"related"}],"termid":"RO:0002634"}


id: PBO:0051916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 1 pseudogene 1","termid":"PBO:0051916"}


id: GO:0010341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a gibberellin = S-adenosyl-L-homocysteine + a gibberellin methyl ester.","definition_xrefs":["PMID:17220201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl-O-methyltransferase activity","termid":"GO:0010340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gibberellin carboxyl-O-methyltransferase activity","termid":"GO:0010341"}


id: PBO:0059538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription factor binding site X","termid":"PBO:0059538"}


id: GO:0072216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of metanephros development. Metanephros development is the process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephros development","termid":"GO:0072215"},{"relation_name":"is_a","term_name":"positive regulation of kidney development","termid":"GO:0090184"},{"relation_name":"positively_regulates","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephros development","termid":"GO:0072216"}


id: GO:0090176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins and contributes to the establishment of planar polarity.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"part_of","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"microtubule cytoskeleton organization involved in establishment of planar polarity","synonyms":[{"name":"microtubule cytoskeleton organisation involved in establishment of planar polarity","type":"exact"}],"termid":"GO:0090176"}


id: GO:0047495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glycerophospho group from one membrane-derived oligosaccharide to another.","definition_xrefs":["EC:2.7.8.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016780","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"membrane-oligosaccharide glycerophosphotransferase activity","secondary_identifiers":["MetaCyc:PGLYCEROLTRANSII-RXN"],"synonyms":[{"name":"membrane-derived-oligosaccharide-6-(glycerophospho)-D-glucose:membrane-derived-oligosaccharide-D-glucose glycerophosphotransferase activity","type":"related"},{"name":"periplasmic phosphoglycerotransferase activity","type":"narrow"},{"name":"phosphoglycerol cyclase activity","type":"related"}],"termid":"GO:0047495"}


id: PBO:0036119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle_assembly_checkpoint","termid":"PBO:0036119"}


id: PBO:0004804
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress Responsive Orphan","termid":"PBO:0004804"}


id: GO:1901136
data:
  {"annotated_genes":["SJAG_02369","SJAG_02247","SJAG_02945","SJAG_04495","SJAG_00409","SJAG_06621","SJAG_02107","SJAG_04334","SJAG_03660","SJAG_01673","SJAG_04870","SJAG_02481","SJAG_06622","SJAG_00605","SJAG_03771","SJAG_01012","SJAG_02009","SJAG_01359","SJAG_01858","SJAG_03852","SJAG_05314","SJAG_02796","SJAG_02959","SJAG_03676","SJAG_02135","SJAG_04048","SJAG_00620","SJAG_03903","SJAG_02580","SJAG_00839","SJAG_03828","SJAG_04192","SJAG_00957","SJAG_03032","SJAG_00685","SJAG_03373","SJAG_00461","SJAG_04487","SJAG_04927","SJAG_01310","SJAG_00633","SJAG_00027"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[83717,83718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[112474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[101536,105023,94104,105482,105020,105486,105484,91118,105018,99488,105481,94374,101537,105019,105022,100557,99746,105487,105485,105017,105483,90628,101902,105021,101903,112444,101538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[97609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"},{"annotations":[95941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[85316,104468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[95086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[95088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[102580,90081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046168"},{"annotations":[100559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107666,94291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[72017,75002],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[87175,108266,86766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[86767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[91818,89645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"},{"annotations":[110058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbohydrate derivative.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00409":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00620":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_00957":null,"SJAG_01012":null,"SJAG_01310":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_01858":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02580":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02959":null,"SJAG_03032":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03771":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_04927":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbohydrate derivative catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate derivative breakdown","type":"exact"},{"name":"carbohydrate derivative catabolism","type":"exact"},{"name":"carbohydrate derivative degradation","type":"exact"}],"termid":"GO:1901136","terms_by_termid":{"GO:0006032":null,"GO:0006096":null,"GO:0006152":null,"GO:0006154":null,"GO:0006198":null,"GO:0006256":null,"GO:0009972":null,"GO:0015938":null,"GO:0035863":null,"GO:0045820":null,"GO:0046081":null,"GO:0046135":null,"GO:0046168":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:0097466":null,"GO:1901911":null}}


id: PBO:0070890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 22","termid":"PBO:0070890"}


id: GO:0044696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virus causes the death of daughter cells which do not contain its genes after host cell division, by a mechanism of post-segregational killing (PSK). The extrachromosomal viral DNA consist of two genes; the product of the second is long lived and toxic, while the product of the first is short lived and antagonizes the lethal action of the toxin. Daughter cells that do not contain the viral extrachromosomal element are killed by the long lived toxin, while daughter cells that do contain the viral extrachromosomal element are protected by the action of the short lived antitoxin it encodes.","definition_xrefs":["Wikipedia:Toxin-antitoxin_system","PMID:11222604","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated killing of host cell","termid":"GO:0001907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"killing by virus of host cell by post-segregational killing","synonyms":[{"name":"killing by virus of host cell by PSK","type":"exact"},{"name":"killing by virus of host cell by toxin-antitoxin system","type":"exact"}],"termid":"GO:0044696"}


id: PBO:0058766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6890","termid":"PBO:0058766"}


id: GO:1904071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynaptic active zone. The presynaptic active zone is a specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, and a specialized cortical cytoskeletal matrix.","definition_xrefs":["GO_REF:0000079","GOC:pr","GOC:TermGenie","PMID:10769383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"presynaptic active zone organization","termid":"GO:1990709"},{"relation_name":"part_of","term_name":"presynapse assembly","termid":"GO:0099054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"presynaptic active zone assembly","synonyms":[{"name":"pre-synaptic active zone assembly","type":"exact"},{"name":"pre-synaptic active zone component assembly","type":"narrow"},{"name":"pre-synaptic active zone component formation","type":"narrow"},{"name":"pre-synaptic active zone formation","type":"exact"},{"name":"presynaptic active zone formation","type":"exact"}],"termid":"GO:1904071"}


id: PBO:0000949
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.5.1.1","termid":"PBO:0000949"}


id: PBO:0028075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_single_nucleus","termid":"PBO:0028075"}


id: PBO:0067256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 330, pseudogene","termid":"PBO:0067256"}


id: MOD:00330
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to a (phospho-5'-guanosine)-L-histidine.","definition_xrefs":["PubMed:10869342","Unimod:413#H","RESID:AA0325","PubMed:10529169","PubMed:7559521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"guanylated residue","termid":"MOD:01163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(phospho-5'-guanosine)-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(1-(5'-adenosine phosphono)imidazol-4-yl)propanoic acid","type":"exact"},{"name":"1'-(phospho-5'-guanosine)-L-histidine","type":"exact"},{"name":"ACT_SITE GMP-histidine intermediate","type":"exact"},{"name":"L-histidine 5'-guanosine phosphoramidester","type":"exact"},{"name":"L-histidine monoanhydride with 5'-guanylic acid","type":"exact"},{"name":"N(tau)-5'-guanylic-L-histidine","type":"exact"},{"name":"N1'-guanylylated histidine","type":"exact"},{"name":"Phosphoguanosine","type":"related"},{"name":"phospho-guanosine","type":"related"},{"name":"tele-5'-guanylic-L-histidine","type":"exact"}],"termid":"MOD:00330"}


id: PBO:0043406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 3","termid":"PBO:0043406"}


id: PBO:0087637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the eukaryotic translation initiation factor 3 (eIF3); component of unknown function; deletion causes defects in mitochondrial organization but not in growth or translation initiation; can rescue cytokinesis and mitochondrial organization defects of the Dictyostelium cluA- mutant; eIF3 is also involved in programmed stop codon readthrough","termid":"PBO:0087637"}


id: FYPO:0004155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during mitotic G1 phase (obsolete FYPO:0004155)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during mitotic G1 phase","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during G1 phase during vegetative growth","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during G1 phase of mitotic cell cycle","type":"exact"},{"name":"increased tyrosine phosphorylation during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004155"}


id: GO:0100048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates phosphatidylcholine biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylcholine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100048)","termid":"GO:0100048"}


id: PATO:0000712
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000712 bouts value (obsolete PATO:0000712)","termid":"PATO:0000712"}


id: GO:0006178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates guanine, 2-amino-6-hydroxypurine, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase salvage","termid":"GO:0043096"},{"relation_name":"is_a","term_name":"guanine biosynthetic process","termid":"GO:0046099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"guanine salvage","synonyms":[{"name":"guanine, xanthine and their nucleoside salvage","type":"broad"}],"termid":"GO:0006178"}


id: PR:Q9P3V4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPBC1348.06c/SPBPB2B2.15.","definition_xrefs":["UniProtKB:Q9P3V4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VEL1-related protein BPB2B2.15/BC1348.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.15","synonyms":[{"name":"Spom972h-SPBPB2B2.15","type":"exact"}],"termid":"PR:Q9P3V4"}


id: PBO:0027263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_elongated_multiseptate_cell","termid":"PBO:0027263"}


id: PBO:0068767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 4, pseudogene","termid":"PBO:0068767"}


id: GO:0050474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(2-aminoethyl)benzene-1,2-diol + 4-hydroxyphenylacetaldehyde = (S)-norcoclaurine + H2O.","definition_xrefs":["EC:4.2.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"(S)-norcoclaurine synthase activity","secondary_identifiers":["RHEA:16173","GO:0050475","MetaCyc:S-NORLAUDANOSOLINE-SYNTHASE-RXN"],"synonyms":[{"name":"(S)-norlaudanosoline synthase activity","type":"related"},{"name":"4-hydroxyphenylacetaldehyde hydro-lyase (adding dopamine)","type":"related"},{"name":"4-hydroxyphenylacetaldehyde hydro-lyase [adding dopamine; (S)-norcoclaurine-forming]","type":"related"}],"termid":"GO:0050474"}


id: GO:0098005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process by which virus heads and tails are attached to each other.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral head-tail joining","synonyms":[{"name":"phage head tail joining","type":"narrow"},{"name":"virus head-tail joining","type":"exact"}],"termid":"GO:0098005"}


id: GO:1900760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sterigmatocystin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterigmatocystin biosynthetic process","termid":"GO:0010913"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"negatively_regulates","term_name":"sterigmatocystin biosynthetic process","termid":"GO:0045461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sterigmatocystin biosynthetic process","synonyms":[{"name":"down regulation of sterigmatocystin anabolism","type":"exact"},{"name":"down regulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"down regulation of sterigmatocystin biosynthetic process","type":"exact"},{"name":"down regulation of sterigmatocystin formation","type":"exact"},{"name":"down regulation of sterigmatocystin synthesis","type":"exact"},{"name":"down-regulation of sterigmatocystin anabolism","type":"exact"},{"name":"down-regulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"down-regulation of sterigmatocystin biosynthetic process","type":"exact"},{"name":"down-regulation of sterigmatocystin formation","type":"exact"},{"name":"down-regulation of sterigmatocystin synthesis","type":"exact"},{"name":"downregulation of sterigmatocystin anabolism","type":"exact"},{"name":"downregulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"downregulation of sterigmatocystin biosynthetic process","type":"exact"},{"name":"downregulation of sterigmatocystin formation","type":"exact"},{"name":"downregulation of sterigmatocystin synthesis","type":"exact"},{"name":"inhibition of sterigmatocystin anabolism","type":"exact"},{"name":"inhibition of sterigmatocystin biosynthesis","type":"exact"},{"name":"inhibition of sterigmatocystin biosynthetic process","type":"narrow"},{"name":"inhibition of sterigmatocystin formation","type":"exact"},{"name":"inhibition of sterigmatocystin synthesis","type":"exact"},{"name":"negative regulation of sterigmatocystin anabolism","type":"exact"},{"name":"negative regulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"negative regulation of sterigmatocystin formation","type":"exact"},{"name":"negative regulation of sterigmatocystin synthesis","type":"exact"}],"termid":"GO:1900760"}


id: SO:0000111
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoded within a transposable element. For example gag, int, env and pol are the transposable element genes of the TY element in yeast.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"},{"relation_name":"part_of","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_gene","synonyms":[{"name":"transposable element gene","type":"exact"}],"termid":"SO:0000111"}


id: GO:0030378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the synthesis of free D-serine from L-serine.","definition_xrefs":["GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"serine racemase activity","secondary_identifiers":["MetaCyc:5.1.1.18-RXN","EC:5.1.1.18","Reactome:R-HSA-9014766","RHEA:10980"],"termid":"GO:0030378"}


id: PBO:0082910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine desulphydrase, enables growth on cysteine as nitrogen source; involved in the production of thiols; null mutant displays increased levels of spontaneous Rad52p foci; expression induced by nitrogen limitation in a GLN3, GAT1-dependent manner and by copper levels in a Mac1-dependent manner","termid":"PBO:0082910"}


id: PATO:0001705
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of violet hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"violet","termid":"PATO:0001424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark violet","termid":"PATO:0001705"}


id: GO:0034891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: endosulfan diol = endosulfan hydroxyether + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endosulfan diol dehydrogenase activity (obsolete GO:0034891)","termid":"GO:0034891"}


id: PBO:0047945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, distamycin A type, rare, fra(16)(q22.1)","termid":"PBO:0047945"}


id: FYPO:0000106
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115342],"is_not":false,"summary":null,"term":"FYPO:0000106"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hygromycin B. Cells stop growing (and may die) at a concentration of hygromycin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to hygromycin B","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"hypersensitive to hygromycin B","type":"exact"},{"name":"sensitive to hygromycin B during mitotic cell cycle","type":"related"},{"name":"sensitive to hygromycin B during vegetative growth","type":"exact"}],"termid":"FYPO:0000106","terms_by_termid":{"FYECO:0000126":null,"FYECO:0000137":null,"FYPO:0000106":null,"FYPO_EXT:0000002":null}}


id: RO:0002406
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p directly activates q if and only if p is immediately upstream of q and p is the realization of a function to increase the rate or activity of q","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_positively_regulates","termid":"RO:0002629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_activates","termid":"RO:0002406"}


id: PBO:0046912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member E4","termid":"PBO:0046912"}


id: PBO:0056697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis initiator","termid":"PBO:0056697"}


id: GO:0090619
data:
  {"annotated_genes":["SJAG_02320","SJAG_02241","SJAG_02368","SJAG_01613","SJAG_03915","SJAG_01464","SJAG_05196","SJAG_01546","SJAG_01805","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87387,89888,89962,90864,92868,95308,95995,98909,103183,114887],"is_not":false,"summary":null,"term":"GO:0090619"}]},"cv_name":"cellular_component","definition":"Either of the ends of a meiotic spindle, a spindle that forms as part of meiosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.","definition_xrefs":["PMID:18250200","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole","termid":"GO:0000922"},{"relation_name":"part_of","term_name":"meiotic spindle","termid":"GO:0072687"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01464":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02241":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_03915":null,"SJAG_04745":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"meiotic spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090619","terms_by_termid":{"GO:0090619":null}}


id: GO:0019567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arabinose, arabino-pentose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose biosynthetic process","termid":"GO:0019322"},{"relation_name":"is_a","term_name":"arabinose metabolic process","termid":"GO:0019566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"arabinose biosynthetic process","synonyms":[{"name":"arabinose anabolism","type":"exact"},{"name":"arabinose biosynthesis","type":"exact"},{"name":"arabinose formation","type":"exact"},{"name":"arabinose synthesis","type":"exact"}],"termid":"GO:0019567"}


id: PBO:0113405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the cyclic AMP-dependent protein kinase (PKA); PKA is a component of a signaling pathway that controls a variety of cellular processes, including metabolism, cell cycle, stress response, stationary phase, and sporulation; regulator of meiotic commitment","termid":"PBO:0113405"}


id: GO:1990375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of the baculum over time, from its formation to the mature structure.","definition_xrefs":["GOC:sl","PMID:21471296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baculum development","synonyms":[{"name":"os penis development","type":"exact"},{"name":"penile bone development","type":"exact"},{"name":"penis bone development","type":"exact"}],"termid":"GO:1990375"}


id: PBO:0071551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 16","termid":"PBO:0071551"}


id: PBO:0086227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that inhibits ATP hydrolysis by the F1F0-ATP synthase; inhibitory function is enhanced by stabilizing proteins Stf1p and Stf2p; has a calmodulin-binding motif and binds calmodulin in vitro; INH1 has a paralog, STF1, that arose from the whole genome duplication","termid":"PBO:0086227"}


id: PBO:0049311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 1","termid":"PBO:0049311"}


id: PBO:0017664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug114","termid":"PBO:0017664"}


id: PBO:0087563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of spindle-assembly checkpoint complex; involved in delaying anaphase onset in cells with defects in mitotic spindle assembly; pseudosubstrate inhibitor of APC(Cdc20), the anaphase promoting complex involved in securin (Pds1p) turnover; MAD3 has a paralog, BUB1, that arose from the whole genome duplication","termid":"PBO:0087563"}


id: PBO:0058525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6070","termid":"PBO:0058525"}


id: GO:0031839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 neuromedin U receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromedin U receptor binding","termid":"GO:0042922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 1 neuromedin U receptor binding","synonyms":[{"name":"type 1 neuromedin U receptor ligand","type":"narrow"}],"termid":"GO:0031839"}


id: GO:0006826
data:
  {"annotated_genes":["SJAG_04743","SJAG_01007","SJAG_04260","SJAG_04737","SJAG_02968","SJAG_04675","SJAG_04867","SJAG_02457","SJAG_02473","SJAG_04677","SJAG_02735","SJAG_02834"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94190,96587,109889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[108887,109311,60768,88543,91431,99900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034755"},{"annotations":[85393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[99892,88548,108888,88544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[61608,106874,61325,106873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"},{"annotations":[108889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015891"},{"annotations":[61607,106875,61324,106876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"The directed movement of iron (Fe) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_02457":null,"SJAG_02473":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_02968":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04737":null,"SJAG_04743":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"iron ion transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0015682","GO:0033216","GO:0097286","GO:0015681","GO:0015684"],"synonyms":[{"name":"ferric ion import","type":"narrow"},{"name":"ferric ion transport","type":"narrow"},{"name":"ferric iron import","type":"narrow"},{"name":"ferric iron transport","type":"narrow"},{"name":"ferric iron uptake","type":"narrow"},{"name":"ferrous ion transport","type":"narrow"},{"name":"ferrous iron transport","type":"narrow"},{"name":"iron ion import","type":"related"},{"name":"iron transport","type":"exact"}],"termid":"GO:0006826","terms_by_termid":{"GO:0015891":null,"GO:0033214":null,"GO:0033215":null,"GO:0034755":null,"GO:0044718":null,"GO:0048250":null,"GO:0140466":null}}


id: PBO:0054079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1429","termid":"PBO:0054079"}


id: PBO:0086455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein; YPR071W is not an essential gene; YPR071W has a paralog, YIL029C, that arose from a single-locus duplication","termid":"PBO:0086455"}


id: SO:0000805
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is engineered and foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_region","synonyms":[{"name":"engineered foreign region","type":"exact"}],"termid":"SO:0000805"}


id: PBO:0064770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase like 1 pseudogene 1","termid":"PBO:0064770"}


id: PBO:0086113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for clearance of inclusion bodies; localizes to the inclusion bodies formed under protein misfolding stress; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress; IML2 has a paralog, YKR018C, that arose from the whole genome duplication","termid":"PBO:0086113"}


id: GO:0005895
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-3; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-5 receptor, whereas the beta chain is shared with the receptors for granulocyte-macrophage colony-stimulating factor and interleukin-3.","definition_xrefs":["GOC:mah","PMID:11839579","PMID:11312115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interleukin-5 receptor complex","synonyms":[{"name":"IL-5 receptor complex","type":"exact"}],"termid":"GO:0005895"}


id: PBO:0056537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coiled-coil domain 1 pseudogene 2","termid":"PBO:0056537"}


id: GO:1903779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","PMID:12967627","GOC:rph","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"regulates","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac conduction","termid":"GO:1903779"}


id: FYPO:0003044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is abnormal. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["GO:0031507","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal heterochromatin assembly","synonyms":[{"name":"abnormal heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"abnormal heterochromatin assembly during vegetative growth","type":"exact"},{"name":"abnormal heterochromatin formation","type":"exact"}],"termid":"FYPO:0003044"}


id: PR:O74927
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- met11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.10","synonyms":[{"name":"Spom972h-met11","type":"exact"}],"termid":"PR:O74927"}


id: PBO:0091206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu","termid":"PBO:0091206"}


id: GO:0006889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the concentration of calcium in the endoplasmic reticulum.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium in ER (obsolete GO:0006889)","synonyms":[{"name":"regulation of calcium in ER","type":"exact"}],"termid":"GO:0006889"}


id: PBO:0073106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDK1 antisense RNA 1","termid":"PBO:0073106"}


id: PBO:0086261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates phospholipid asymmetry at plasma membrane; may act to generate normal levels of PI4P; may act together with or upstream of Stt4p; at least partially mediates proper localization of Stt4p to the plasma membrane","termid":"PBO:0086261"}


id: PBO:0071199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 40","termid":"PBO:0071199"}


id: PBO:0085560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing GATA family zinc finger motifs; involved in spore wall assembly; sequence similarity to GAT4, and the double mutant gat3 gat4 exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085560"}


id: PBO:0073144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC23A antisense RNA 1","termid":"PBO:0073144"}


id: PBO:0069991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1286, pseudogene","termid":"PBO:0069991"}


id: PBO:0067265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 339, pseudogene","termid":"PBO:0067265"}


id: PBO:0004011
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Birt-Hogg-Dube syndrome","termid":"PBO:0004011"}


id: PBO:0062053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 1","termid":"PBO:0062053"}


id: PBO:0064175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XB, pseudogene","termid":"PBO:0064175"}


id: PBO:0079305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 2B","termid":"PBO:0079305"}


id: FYPO:0001853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription does not occur when the cell is subject to iron ion starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription during vegetative growth","termid":"FYPO:0001443"},{"relation_name":"is_a","term_name":"decreased transcription during iron starvation","termid":"FYPO:0001852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished transcription during iron starvation","synonyms":[{"name":"abolished transcription during iron depletion","type":"exact"},{"name":"abolished transcription during iron deprivation","type":"exact"},{"name":"abolished transcription during iron ion starvation","type":"exact"},{"name":"abolished transcription during iron starvation during mitotic cell cycle","type":"related"},{"name":"abolished transcription during iron starvation during vegetative growth","type":"exact"},{"name":"transcription abolished during iron starvation","type":"exact"}],"termid":"FYPO:0001853"}


id: FYPO:0002803
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which vacuole organization is abnormal. Vacuole organization results in the assembly, arrangement of constituent parts, or disassembly of a vacuole.","definition_xrefs":["GO:0007033","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vacuole organization","synonyms":[{"name":"abnormal vacuolar organisation","type":"exact"},{"name":"abnormal vacuolar organization","type":"exact"},{"name":"abnormal vacuole organisation","type":"exact"}],"termid":"FYPO:0002803"}


id: PBO:0079158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 17","termid":"PBO:0079158"}


id: GO:0071757
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A circulating form of IgM consisting of a hexamer of IgM core units with a single J chain polypeptide.","definition_xrefs":["GOC:add","ISBN:0781765196","PMID:20176268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgM immunoglobulin complex, circulating","termid":"GO:0071754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"hexameric IgM immunoglobulin complex","synonyms":[{"name":"hexameric IgM antibody","type":"exact"}],"termid":"GO:0071757"}


id: GO:0045135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: polysaccharides containing beta-D-mannuronate residues = oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl end. This reaction is the eliminative cleavage of polysaccharides containing beta-D-mannuronate residues to give oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl groups at their ends.","definition_xrefs":["EC:4.2.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"poly(beta-D-mannuronate) lyase activity","secondary_identifiers":["MetaCyc:4.2.2.3-RXN"],"synonyms":[{"name":"alginase I","type":"related"},{"name":"alginase activity","type":"related"},{"name":"alginate lyase I activity","type":"narrow"},{"name":"alginate lyase activity","type":"related"},{"name":"poly(beta-D-1,4-mannuronide) lyase activity","type":"related"},{"name":"poly(mana) alginate lyase activity","type":"narrow"}],"termid":"GO:0045135"}


id: PBO:0068201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 508","termid":"PBO:0068201"}


id: GO:1990487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lignin in the absence of oxygen. Lignin is a class of polymers of phenylpropanoid units.","definition_xrefs":["DOI:10.1039/C3EE40932E","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin catabolic process","termid":"GO:0046274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"anaerobic lignin catabolic process","synonyms":[{"name":"anaerobic lignin degradation","type":"exact"}],"termid":"GO:1990487"}


id: FYPO:0006662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during G0 phase in which the nucleus is broken into multiple small fragments that are smaller than a normal nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented nucleus","termid":"FYPO:0006661"},{"relation_name":"is_a","term_name":"abnormal nuclear morphology during G0","termid":"FYPO:0006667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002403","FYPO:0000002"],"is_obsolete":false,"name":"fragmented nucleus during G0","synonyms":[{"name":"degraded nucleus during cell quiescence","type":"related"},{"name":"fragmented nuclear DNA during G0","type":"related"},{"name":"fragmented nucleus during cell quiescence","type":"exact"},{"name":"fragmented nucleus during quiescence","type":"exact"},{"name":"loss of nuclear integrity during G0","type":"related"}],"termid":"FYPO:0006662"}


id: PBO:0059382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 7","termid":"PBO:0059382"}


id: PBO:0066001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ral GTPase activating protein catalytic subunit alpha 1","termid":"PBO:0066001"}


id: PBO:0080604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 38","termid":"PBO:0080604"}


id: GO:0018054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent modification of peptidyl-lysine by biotin to form peptidyl-N6-biotinyl-L-lysine.","definition_xrefs":["RESID:AA0117"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine biotinylation (obsolete GO:0018054)","termid":"GO:0018054"}


id: PBO:0034720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex DNA helicase (ERCC-3) subunit Ptr8","termid":"PBO:0034720"}


id: PBO:0034468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_gene_conversion_during_vegetative_growth","termid":"PBO:0034468"}


id: PBO:0034680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-merotelic_kinetochore_attachment_during_meiosis_I","termid":"PBO:0034680"}


id: PBO:0091981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic spindle pole body protein Dms1","termid":"PBO:0091981"}


id: PBO:0088564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh2","termid":"PBO:0088564"}


id: PBO:0089083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 8, hinge protein","termid":"PBO:0089083"}


id: GO:1903617
data:
  {"annotated_genes":["SJAG_02392","SJAG_00845","SJAG_01787","SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86880,91959,99805,106858,115258],"is_not":false,"summary":null,"term":"GO:1903617"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cytokinesis, division site positioning.","definition_xrefs":["PMID:21246752","PMID:9852154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis, division site positioning","termid":"GO:1902472"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"positive regulation of cytokinesis, site selection","termid":"GO:2000076"},{"relation_name":"positively_regulates","term_name":"mitotic cytokinesis, division site positioning","termid":"GO:1902408"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_02838":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cytokinesis, division site positioning","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"positive regulation of mitotic cytokinesis, site selection","type":"exact"}],"termid":"GO:1903617","terms_by_termid":{"GO:1903617":null}}


id: GO:0009209
data:
  {"annotated_genes":["SJAG_02887","SJAG_00412","SJAG_00533","SJAG_05024","SJAG_03708","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[96170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[89057,111000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[102602,89515,96172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine ribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate biosynthetic process","termid":"GO:0009148"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate biosynthetic process","termid":"GO:0009201"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate metabolic process","termid":"GO:0009208"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00533":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03708":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside triphosphate anabolism","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate formation","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009209","terms_by_termid":{"GO:0006228":null,"GO:0006241":null,"GO:0044210":null,"GO:0044211":null}}


id: FYPO:0004758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the initiation of premeiotic DNA replication is abnormal. May result in re-replication of all or part of the genome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of DNA replication initiation","termid":"FYPO:0004757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal negative regulation of premeiotic DNA replication initiation","synonyms":[{"name":"abnormal negative regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"premeiotic DNA re-replication","type":"related"},{"name":"premeiotic DNA rereplication","type":"related"}],"termid":"FYPO:0004758"}


id: PBO:0075652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splA/ryanodine receptor domain and SOCS box containing 1","termid":"PBO:0075652"}


id: GO:1904656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sensory perception of sweet taste.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:1716172","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"sensory perception of sweet taste","termid":"GO:0050916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception of sweet taste","synonyms":[{"name":"regulation of sweet taste perception","type":"exact"}],"termid":"GO:1904656"}


id: PBO:0012528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_specification_of","termid":"PBO:0012528"}


id: PBO:0076443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 13 pseudogene 2","termid":"PBO:0076443"}


id: RO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A 'has regulatory component activity' B if A and B are GO molecular functions (GO_0003674), A has_component B and A is regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component_activity","termid":"RO:0002017"},{"relation_name":"is_a","term_name":"regulated_by","termid":"RO:0002334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_regulatory_component_activity","termid":"RO:0002013"}


id: GO:2000065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cortisol biosynthetic process.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid biosynthetic process","termid":"GO:0031947"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"is_a","term_name":"regulation of cortisol biosynthetic process","termid":"GO:2000064"},{"relation_name":"negatively_regulates","term_name":"cortisol biosynthetic process","termid":"GO:0034651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cortisol biosynthetic process","synonyms":[{"name":"negative regulation of cortisol anabolism","type":"related"},{"name":"negative regulation of cortisol biosynthesis","type":"exact"},{"name":"negative regulation of cortisol formation","type":"exact"},{"name":"negative regulation of cortisol synthesis","type":"exact"}],"termid":"GO:2000065"}


id: GO:0004909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-1 to initiate a change in cell activity via signaling pathways and mediated by adaptor proteins.","definition_xrefs":["PMID:15062641","PMID:18613828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor activity","termid":"GO:0004908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-1, type I, activating receptor activity","secondary_identifiers":["GO:0019967"],"synonyms":[{"name":"IL-1 type I, activating binding","type":"exact"},{"name":"IL-1 type I, activating receptor","type":"exact"},{"name":"interleukin-1 activating receptor activity","type":"exact"},{"name":"interleukin-1 type I receptor activity","type":"exact"},{"name":"interleukin-1, type I, activating binding","type":"related"}],"termid":"GO:0004909"}


id: PBO:0082324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; bound by ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly to the nucleus throughout the cell cycle; protein abundance increases in response to DNA replication stress","termid":"PBO:0082324"}


id: GO:0030626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a U12 small nuclear RNA (U12 snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"U12 snRNA binding","termid":"GO:0030626"}


id: SO:0100001
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a peptide that is involved in a biochemical function.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_motif","termid":"SO:0001067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"biochemical_region_of_peptide","synonyms":[{"name":"biochemical motif","type":"exact"},{"name":"biochemical region of peptide","type":"exact"},{"name":"biochemical_region","type":"related"}],"termid":"SO:0100001"}


id: PBO:0081664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 586","termid":"PBO:0081664"}


id: PATO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of whether the bearer's being covered by a liquid.","definition_xrefs":["wordreference.com:wordreference.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wetness","termid":"PATO:0001822"}


id: GO:0006224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete uridine kinase reaction (obsolete GO:0006224)","synonyms":[{"name":"uridine kinase reaction","type":"exact"}],"termid":"GO:0006224"}


id: PBO:0036093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K12_acetylation_during_vegetative_growth","termid":"PBO:0036093"}


id: GO:0015383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + bicarbonate(in) = sulfate(in) + bicarbonate(out).","definition_xrefs":["TC:2.A.53.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"secondary active sulfate transmembrane transporter activity","termid":"GO:0008271"},{"relation_name":"is_a","term_name":"bicarbonate transmembrane transporter activity","termid":"GO:0015106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"sulfate:bicarbonate antiporter activity","synonyms":[{"name":"sulfate:hydrogencarbonate antiporter activity","type":"exact"},{"name":"sulphate:bicarbonate antiporter activity","type":"exact"}],"termid":"GO:0015383"}


id: GO:1902665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isobutanol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:24014527","GO_REF:0000071","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isobutanol","secondary_identifiers":["GO:1990337"],"synonyms":[{"name":"process resulting in tolerance to isobutanol","type":"narrow"},{"name":"response to 2-methylpropan-1-ol","type":"exact"}],"termid":"GO:1902665"}


id: PR:Q9USH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP31B10.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USH2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0651 protein P31B10.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.02","synonyms":[{"name":"Spom972h-SPCP31B10.02","type":"exact"}],"termid":"PR:Q9USH2"}


id: GO:0098730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The symmetric division of a male germline stem cell to produce two male germline stem cells. An example of this is found in mammalian spermatogonial stem cells, some proportion of which divide symmetrically, so amplifying the population. The choice between asymmetric and symmetric division in this case appears to be internal and stochastic.","definition_xrefs":["GOC:dos","PMID:19948499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline stem cell symmetric division","termid":"GO:0098729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germline stem cell symmetric division","termid":"GO:0098730"}


id: GO:0010206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Proteolysis of the damaged D1 protein and re-assembly of a new D1 subunit in the photosystem II following photoinhibition.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein repair","termid":"GO:0030091"},{"relation_name":"part_of","term_name":"photosynthesis, light harvesting","termid":"GO:0009765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosystem II repair","termid":"GO:0010206"}


id: PBO:0064774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase like 6","termid":"PBO:0064774"}


id: GO:0097174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,6-anhydro-N-acetyl-beta-muramic acid, the 1,6-anhydro-derivative of N-acetyl-beta-muramic acid.","definition_xrefs":["GOC:yaf","PMID:15901686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"1,6-anhydro-N-acetyl-beta-muramic acid metabolic process","synonyms":[{"name":"1,6-anhydro-N-acetyl-beta-muramate metabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramate metabolism","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramic acid metabolism","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid metabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid metabolism","type":"exact"}],"termid":"GO:0097174"}


id: GO:0015561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: rhamnose(out) + H+(out) = rhamnose(in) + H+(in).","definition_xrefs":["TC:2.A.7.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"},{"relation_name":"is_a","term_name":"rhamnose transmembrane transporter activity","termid":"GO:0015153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"rhamnose:proton symporter activity","synonyms":[{"name":"rhamnose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015561"}


id: PBO:0085901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in positive regulation of 1,3-beta-glucan synthesis and the Pkc1p-MAPK pathway; multicopy suppressor of temperature-sensitive mutations in CDC24 and CDC42, and of mutations in BEM4; potential Cdc28p substrate; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0085901"}


id: PBO:0041084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRMS1 like transcriptional repressor","termid":"PBO:0041084"}


id: PBO:0049498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 5, pseudogene","termid":"PBO:0049498"}


id: GO:0071881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway initiated by a ligand binding to an adrenergic receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","GOC:signaling","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","termid":"GO:0007193"},{"relation_name":"is_a","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting adrenergic receptor signaling pathway","synonyms":[{"name":"adrenergic receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"adrenergic receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"inhibition of adenylate cyclase activity by adrenergic receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by adrenergic receptor signalling pathway","type":"related"}],"termid":"GO:0071881"}


id: GO:0030709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The delamination process that results in the splitting off of border cells from the anterior epithelium, prior to border cell migration.","definition_xrefs":["PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"},{"relation_name":"part_of","term_name":"follicle cell of egg chamber development","termid":"GO:0030707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"border follicle cell delamination","synonyms":[{"name":"border cell delamination","type":"broad"}],"termid":"GO:0030709"}


id: GO:0042453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyguanosine, a nucleoside consisting of the base guanine and the sugar deoxyribose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleoside metabolic process","termid":"GO:0046122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"deoxyguanosine metabolic process","synonyms":[{"name":"deoxyguanosine metabolism","type":"exact"}],"termid":"GO:0042453"}


id: PBO:0059110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOS proto-oncogene, serine/threonine kinase","termid":"PBO:0059110"}


id: GO:0031298
data:
  {"annotated_genes":["SJAG_02724","SJAG_04671","SJAG_03097"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95455,102717,104602],"is_not":false,"summary":null,"term":"GO:0031298"}]},"cv_name":"cellular_component","definition":"A protein complex conserved in eukaryotes and associated with the replication fork; the complex stabilizes stalled replication forks and is thought to be involved in coordinating leading- and lagging-strand synthesis and in replication checkpoint signaling.","definition_xrefs":["PMID:15367656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear replication fork","termid":"GO:0043596"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02724":null,"SJAG_03097":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"replication fork protection complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Swi1-Swi3 complex","type":"narrow"},{"name":"TIMELESS-TIPIN complex","type":"narrow"},{"name":"replisome progression complex","type":"exact"}],"termid":"GO:0031298","terms_by_termid":{"GO:0031298":null}}


id: PBO:0058210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4502","termid":"PBO:0058210"}


id: GO:0009448
data:
  {"annotated_genes":["SJAG_00674","SJAG_03434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87803],"is_not":false,"summary":null,"term":"GO:0009448"},{"annotations":[84556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"gamma-aminobutyric acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GABA metabolic process","type":"exact"},{"name":"GABA metabolism","type":"exact"},{"name":"gamma-aminobutyric acid metabolism","type":"exact"},{"name":"4-aminobutanoate metabolic process","type":"exact"},{"name":"4-aminobutanoate metabolism","type":"exact"},{"name":"4-aminobutyrate metabolic process","type":"exact"},{"name":"4-aminobutyrate metabolism","type":"exact"}],"termid":"GO:0009448","terms_by_termid":{"GO:0009448":null,"GO:0009450":null}}


id: GO:0004736
data:
  {"annotated_genes":["SJAG_00464"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101521],"is_not":false,"summary":null,"term":"GO:0004736"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + bicarbonate + pyruvate = ADP + 2 H+ + oxaloacetate + phosphate.","definition_xrefs":["RHEA:20844","EC:6.4.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyruvate carboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PYRUVATE-CARBOXYLASE-RXN","KEGG_REACTION:R00344","Reactome:R-HSA-70501"],"synonyms":[{"name":"pyruvate:carbon-dioxide ligase (ADP-forming)","type":"related"},{"name":"pyruvic carboxylase activity","type":"related"}],"termid":"GO:0004736","terms_by_termid":{"GO:0004736":null}}


id: GO:0080189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of a plant structure from the time of its initiation by an apical meristem until its expansion is completed.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary growth","termid":"GO:0080189"}


id: PBO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS complex subunit Vps41 (predicted)","termid":"PBO:0001073"}


id: PR:Q9UUK1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A beta-catenin-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14978:SF0","OMA:SCHPO02071","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-catenin-like protein 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.06c","secondary_identifiers":["UniProtKB:Q9UUK1"],"synonyms":[{"name":"Spom972h-CTNNBL1","type":"exact"}],"termid":"PR:Q9UUK1"}


id: PBO:0028332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_sorbitol","termid":"PBO:0028332"}


id: PBO:0083864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fatty-acyl coenzyme A oxidase; involved in the fatty acid beta-oxidation pathway; localized to the peroxisomal matrix; component of a light sensing pathway, converting light into a hydrogen peroxide signal, modulating nucleo-cytoplasmic shuttling of stress-responsive transcription factor, Msn2p","termid":"PBO:0083864"}


id: GO:0032363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of FMN, riboflavin 5'-(dihydrogen phosphate), a coenzyme for a number of oxidative enzymes including NADH dehydrogenase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside monophosphate catabolic process","termid":"GO:0009158"},{"relation_name":"is_a","term_name":"ribonucleotide catabolic process","termid":"GO:0009261"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"},{"relation_name":"is_a","term_name":"FMN metabolic process","termid":"GO:0046444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"FMN catabolic process","termid":"GO:0032363"}


id: GO:0051857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring on or near the exterior of its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of organism on or near symbiont surface (obsolete GO:0051857)","synonyms":[{"name":"growth or development of organism during interaction with symbiont","type":"exact"},{"name":"growth or development of organism on or near symbiont surface","type":"exact"}],"termid":"GO:0051857"}


id: PBO:0078261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon ACA) 1-1","termid":"PBO:0078261"}


id: MOD:01702
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes a proton from a residue 1-carboxyl group (referred to as the alpha-carboxyl), forming a carboxylate anion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deprotonated residue","termid":"MOD:01701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-carboxyl deprotonated residue","synonyms":[{"name":"C1H-NRes","type":"exact"}],"termid":"MOD:01702"}


id: GO:0001759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ formation","termid":"GO:0003156"},{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"positively_regulates","term_name":"specification of animal organ identity","termid":"GO:0010092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organ induction","synonyms":[{"name":"induction of an organ","type":"exact"}],"termid":"GO:0001759"}


id: PBO:0077481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 201","termid":"PBO:0077481"}


id: FYPO:0002719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell septum is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to septum","termid":"FYPO:0002718"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to septum","synonyms":[{"name":"decreased protein localisation to septum","type":"exact"},{"name":"decreased protein localization to cell septum","type":"exact"},{"name":"decreased protein localization to division septum","type":"exact"},{"name":"decreased protein localization to septum during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to septum during vegetative growth","type":"exact"},{"name":"reduced protein localization to septum","type":"exact"}],"termid":"FYPO:0002719"}


id: GO:0035485
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90971],"is_not":false,"summary":null,"term":"GO:0035485"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing an A/G mispair.","definition_xrefs":["GOC:jh","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"adenine/guanine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"A/G mispair binding","type":"exact"},{"name":"G/A mispair binding","type":"related"},{"name":"guanine-adenine mispair binding","type":"exact"}],"termid":"GO:0035485","terms_by_termid":{"GO:0035485":null}}


id: PBO:0061978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AS member 1 pseudogene","termid":"PBO:0061978"}


id: PBO:0003483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal lysine methyltransferase Set10","termid":"PBO:0003483"}


id: PBO:0070292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 33","termid":"PBO:0070292"}


id: PBO:0045928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain containing 1","termid":"PBO:0045928"}


id: PBO:0002966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase (RNR) inhibitor","termid":"PBO:0002966"}


id: PBO:0027867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thin_mitotic_spindle_midzone","termid":"PBO:0027867"}


id: GO:1904384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium phosphate stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:24625659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to salt","termid":"GO:1902075"},{"relation_name":"is_a","term_name":"response to sodium phosphate","termid":"GO:1904383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium phosphate","termid":"GO:1904384"}


id: PBO:0028254
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_mitotic_G2_phase","termid":"PBO:0028254"}


id: PBO:0041264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q binding protein pseudogene 1","termid":"PBO:0041264"}


id: PBO:0046502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERI1 exoribonuclease family member 3","termid":"PBO:0046502"}


id: PBO:0046986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member K, pseudogene","termid":"PBO:0046986"}


id: GO:0017009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycocyanobilin to phycocyanin or allophycocyanin.","definition_xrefs":["RESID:AA0131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-bilin linkage","termid":"GO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phycocyanobilin linkage","termid":"GO:0017009"}


id: PBO:0078691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 2-4","termid":"PBO:0078691"}


id: GO:0009879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of an organism's body plan or a part of an organism such that it is symmetric around a central axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of symmetry","termid":"GO:0009799"},{"relation_name":"part_of","term_name":"radial pattern formation","termid":"GO:0009956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of radial symmetry","synonyms":[{"name":"determination of radial asymmetry","type":"exact"}],"termid":"GO:0009879"}


id: PBO:0061240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP56 ribonucleoprotein pseudogene 1","termid":"PBO:0061240"}


id: PBO:0050155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 11","termid":"PBO:0050155"}


id: FYECO:0000041
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a sugar alcohol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000041 sugar alcohol added (obsolete FYECO:0000041)","termid":"FYECO:0000041"}


id: PBO:0077843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPD52 like 2","termid":"PBO:0077843"}


id: GO:1990502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps required to transform a dense core granule generated at the trans-Golgi network into a fully formed and transmissible dense core granule. Dense core granule maturation proceeds through clathrin-mediated membrane remodeling events and is essential for efficient processing of cargo within dense core granules as well as for removing factors that might otherwise interfere with dense core granule trafficking and exocytosis.","definition_xrefs":["GOC:kmv","PMID:22654674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule maturation","termid":"GO:0061792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dense core granule maturation","synonyms":[{"name":"dense core vesicle maturation","type":"exact"}],"termid":"GO:1990502"}


id: GO:0006094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.","definition_xrefs":["MetaCyc:GLUCONEO-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"gluconeogenesis","secondary_identifiers":["Wikipedia:Gluconeogenesis"],"synonyms":[{"name":"glucose biosynthesis","type":"exact"},{"name":"glucose biosynthetic process","type":"exact"}],"termid":"GO:0006094"}


id: GO:0018184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by polyamination.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein polyamination","synonyms":[{"name":"protein amino acid polyamination","type":"exact"}],"termid":"GO:0018184"}


id: PBO:0042605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 5","termid":"PBO:0042605"}


id: PBO:0086408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative glycoside hydrolase of the mitochondrial intermembrane space","termid":"PBO:0086408"}


id: PBO:0039219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member D1 pseudogene 1","termid":"PBO:0039219"}


id: GO:0045861
data:
  {"annotated_genes":["SJAG_00475","SJAG_00052","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[103038,86517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"proteolysis","termid":"GO:0006508"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteolysis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of proteolysis","type":"exact"},{"name":"down-regulation of proteolysis","type":"exact"},{"name":"downregulation of proteolysis","type":"exact"},{"name":"inhibition of proteolysis","type":"narrow"},{"name":"negative regulation of peptidolysis","type":"exact"}],"termid":"GO:0045861","terms_by_termid":{"GO:0032435":null,"GO:1905785":null}}


id: FYPO:0007946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is decreased.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein ubiquitination","termid":"FYPO:0006977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein ubiquitination","termid":"FYPO:0007946"}


id: PBO:0018087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Prp24","termid":"PBO:0018087"}


id: PBO:0075726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRM pseudogene 2","termid":"PBO:0075726"}


id: GO:1901153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving paromomycin.","definition_xrefs":["UniPathway:UPA00970","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"paromomycin metabolic process","synonyms":[{"name":"paromomycin metabolism","type":"exact"}],"termid":"GO:1901153"}


id: PR:Q1MTN9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcf1 gene.","definition_xrefs":["UniProtKB:Q1MTN9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin assembly factor 1 subunit rlf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.03c","synonyms":[{"name":"Spom972h-pcf1","type":"exact"}],"termid":"PR:Q1MTN9"}


id: PBO:0036525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBS domain protein implicated in magnesium homeostasis (predicted)","termid":"PBO:0036525"}


id: PBO:0113307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in homologous recombination; attenuates resection of DNA double-strand break ends and stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA (ssDNA); anneals complementary ssDNA; involved in the repair of double-strand breaks in DNA during vegetative growth, meiosis and UV induced sister chromatid recombination; forms a homodecameric ring; phosphorylation by Cdc28p in G2/M phase promotes Rad52p ring interaction that leads to superstructure formation","termid":"PBO:0113307"}


id: GO:0071349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-12 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-12","termid":"GO:0070671"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-12","synonyms":[{"name":"cellular response to IL-12","type":"exact"}],"termid":"GO:0071349"}


id: PBO:0079682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3C","termid":"PBO:0079682"}


id: PBO:0039754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O pseudogene 5","termid":"PBO:0039754"}


id: PBO:0081303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF84 divergent transcript","termid":"PBO:0081303"}


id: GO:0033267
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A part of an axon, a cell projection of a neuron.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete axon part (obsolete GO:0033267)","termid":"GO:0033267"}


id: FYPO:0007711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Ssb1 accumulates normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:33723569","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal number of Ssb1 foci","synonyms":[{"name":"normal number of RPA foci","type":"exact"},{"name":"normal number of Rad11 foci","type":"exact"},{"name":"normal number of Rpa1 foci","type":"exact"},{"name":"normal number of Ssb1 foci during mitotic cell cycle","type":"related"},{"name":"normal number of Ssb1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0007711"}


id: PBO:0034599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_centromere_inner_repeat","termid":"PBO:0034599"}


id: GO:1990019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a protein storage vacuole, a storage vacuole that contains a lytic vacuole.","definition_xrefs":["GOC:tb","PMID:21670741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein storage vacuole organization","termid":"GO:1990019"}


id: PBO:0070524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 23","termid":"PBO:0070524"}


id: GO:0120205
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proximal region of the photoreceptor connecting cilium is similar to the transition zone of unspecialized primary cilia and houses several major transition zone complexes, including NPHP, MKS, and RPGR.","definition_xrefs":["GOC:krc","PMID:29899041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"photoreceptor connecting cilium","termid":"GO:0032391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor proximal connecting cilium","synonyms":[{"name":"PCC","type":"related"},{"name":"photoreceptor PCC","type":"related"}],"termid":"GO:0120205"}


id: FYPO:0007228
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 3'-deoxyribose phosphate lyase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal 3'-deoxyribose phosphate lyase activity","synonyms":[{"name":"abnormal 3'-dRP lyase activity","type":"exact"}],"termid":"FYPO:0007228"}


id: PBO:0060185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 5AC, oligomeric mucus/gel-forming","termid":"PBO:0060185"}


id: FYPO:0005029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of the gamma-tubulin complex to the spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body","termid":"FYPO:0004589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased gamma-tubulin complex localization to mitotic spindle pole body","synonyms":[{"name":"decreased gamma-tubulin complex localisation to mitotic spindle pole body","type":"exact"},{"name":"decreased gamma-tubulin complex localization to mitotic SPB","type":"exact"},{"name":"decreased gamma-tubulin complex localization to mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased gamma-tubulin complex localization to mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"reduced gamma-tubulin complex localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0005029"}


id: PBO:0046836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 9","termid":"PBO:0046836"}


id: MOD:01200
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-heptosyl-L-threonine.","definition_xrefs":["Unimod:490#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptosylated residue","termid":"MOD:00925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-heptosyl-L-threonine","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:01200"}


id: GO:1900363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mRNA polyadenylation.","definition_xrefs":["GOC:se","GOC:TermGenie","PMID:15121841"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mRNA polyadenylation (obsolete GO:1900363)","synonyms":[{"name":"regulation of cleavage and polyadenylylation specificity factor activity","type":"narrow"},{"name":"regulation of mRNA polyadenylylation","type":"exact"}],"termid":"GO:1900363"}


id: PBO:0052542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 15","termid":"PBO:0052542"}


id: PBO:0043640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 3","termid":"PBO:0043640"}


id: PBO:0060101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 2","termid":"PBO:0060101"}


id: PBO:0058886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10523","termid":"PBO:0058886"}


id: PBO:0077351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 91","termid":"PBO:0077351"}


id: PBO:0072664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4 interacting protein 1","termid":"PBO:0072664"}


id: PBO:0070735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 5","termid":"PBO:0070735"}


id: PBO:0065528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched domain containing 3 (gene/pseudogene)","termid":"PBO:0065528"}


id: FYPO:0004369
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"},{"relation_name":"is_a","term_name":"decreased cellular phytochelatin level","termid":"FYPO:0002829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased vacuolar phytochelatin level","synonyms":[{"name":"decreased level of phytochelatin in vacuole","type":"exact"},{"name":"decreased vacuolar phytochelatin level during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar phytochelatin level during vegetative growth","type":"exact"},{"name":"reduced level of phytochelatin in vacuole","type":"exact"},{"name":"reduced vacuolar phytochelatin level","type":"exact"}],"termid":"FYPO:0004369"}


id: GO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Exonucleolytic digestion of a pre-rRNA molecule in the process to generate a mature rRNA molecule.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete exonucleolytic trimming involved in rRNA processing (obsolete GO:0000459)","synonyms":[{"name":"exonucleolytic trimming during rRNA processing","type":"related"}],"termid":"GO:0000459"}


id: PR:000036302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A G2/mitotic-specific cyclin cdc13 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G2/mitotic-specific cyclin cdc13","termid":"PR:000037485"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/mitotic-specific cyclin cdc13 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC582.03","synonyms":[{"name":"SPBC582.03","type":"related"},{"name":"Spom-cdc13","type":"exact"}],"termid":"PR:000036302"}


id: PBO:0005415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase Meu8 (predicted)","termid":"PBO:0005415"}


id: GO:0071870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a catecholamine stimulus. A catecholamine is any of a group of biogenic amines that includes 4-(2-aminoethyl)pyrocatechol [4-(2-aminoethyl)benzene-1,2-diol] and derivatives formed by substitution.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to monoamine stimulus","termid":"GO:0071868"},{"relation_name":"is_a","term_name":"response to catecholamine","termid":"GO:0071869"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to catecholamine stimulus","termid":"GO:0071870"}


id: PBO:0029120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate","termid":"PBO:0029120"}


id: GO:1904181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane depolarization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20826763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane depolarization","synonyms":[{"name":"activation of membrane depolarization","type":"narrow"},{"name":"up regulation of membrane depolarization","type":"exact"},{"name":"up-regulation of membrane depolarization","type":"exact"},{"name":"upregulation of membrane depolarization","type":"exact"}],"termid":"GO:1904181"}


id: GO:0035663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like 2 protein, a pattern recognition receptor that binds microbial pattern motifs to initiate an innate immune response.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Toll-like receptor binding","termid":"GO:0035325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"Toll-like receptor 2 binding","synonyms":[{"name":"TLR2 binding","type":"exact"}],"termid":"GO:0035663"}


id: PBO:0052800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 40","termid":"PBO:0052800"}


id: PBO:0066354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 1 pseudogene 2","termid":"PBO:0066354"}


id: PBO:0068509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 98, pseudogene","termid":"PBO:0068509"}


id: PBO:0060629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCKAP5 intronic transcript 1","termid":"PBO:0060629"}


id: GO:0032964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%).","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"collagen metabolic process","termid":"GO:0032963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collagen biosynthetic process","synonyms":[{"name":"collagen anabolism","type":"exact"},{"name":"collagen biosynthesis","type":"exact"},{"name":"collagen formation","type":"exact"},{"name":"collagen synthesis","type":"exact"}],"termid":"GO:0032964"}


id: PBO:0043358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claspin","termid":"PBO:0043358"}


id: PBO:0079375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 10","termid":"PBO:0079375"}


id: PBO:0031070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spore_germination","termid":"PBO:0031070"}


id: PBO:0049231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 4","termid":"PBO:0049231"}


id: GO:0032263
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89855],"is_not":false,"summary":null,"term":"GO:0032263"}]},"cv_name":"biological_process","definition":"Any process which produces guanosine monophosphate from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GMP biosynthetic process","termid":"GO:0006177"},{"relation_name":"is_a","term_name":"purine ribonucleotide salvage","termid":"GO:0106380"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GMP salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032263","terms_by_termid":{"GO:0032263":null}}


id: PBO:0085905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments","termid":"PBO:0085905"}


id: PBO:0059196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X3","termid":"PBO:0059196"}


id: PBO:0046001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF1AX pseudogene 1","termid":"PBO:0046001"}


id: MOD:00274
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the hydrogen atom of a cysteine sulfanyl group with a sulfanyl group, forming a disulfanyl group, and converting an L-cysteine residue to L-cysteine persulfide.","definition_xrefs":["ChEBI:28839","RESID:AA0269","PubMed:4276457","PubMed:15096637","PubMed:8161529","Unimod:421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"thiolated residue","termid":"MOD:01886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine persulfide","synonyms":[{"name":"(R)-2-amino-3-disulfanylpropanoic acid","type":"exact"},{"name":"2-amino-3-disulfanylpropanoic acid","type":"exact"},{"name":"2-amino-3-hydrodisulfidopropanoic acid","type":"exact"},{"name":"2-amino-3-hydropersulfidopropanoic acid","type":"exact"},{"name":"2-amino-3-persulfhydrylpropanoic acid","type":"exact"},{"name":"3-(thiosulfeno)-alanine","type":"exact"},{"name":"3-disulfanylalanine","type":"exact"},{"name":"ACT_SITE Cysteine persulfide intermediate","type":"exact"},{"name":"L-cysteine persulfide","type":"exact"},{"name":"MOD_RES Cysteine persulfide","type":"exact"},{"name":"S-mercaptocysteine","type":"exact"},{"name":"S-sulfanylcysteine","type":"exact"},{"name":"Sulfide","type":"related"},{"name":"persulfide","type":"related"},{"name":"thiocysteine","type":"exact"}],"termid":"MOD:00274"}


id: PBO:0110069
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously annotated as ortholog of human WDR54","termid":"PBO:0110069"}


id: RO:0003001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a produced_by b iff some process that occurs_in b has_output a.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"produced_by","termid":"RO:0003001"}


id: SO:0001670
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory promoter element that is distal from the TSS.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_promoter_element","termid":"SO:0001678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal_promoter_element","synonyms":[{"name":"distal promoter element","type":"related"}],"termid":"SO:0001670"}


id: GO:0016322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron remodeling","synonyms":[{"name":"axon pruning","type":"narrow"},{"name":"neuron remodelling","type":"exact"},{"name":"neuronal remodeling","type":"exact"}],"termid":"GO:0016322"}


id: PBO:0052324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1522","termid":"PBO:0052324"}


id: GO:0009340
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric enzyme, which in most bacterial species is composed of two subunits, ParC and ParE. Functions in chromosome segregation and can relax supercoiled DNA.","definition_xrefs":["PMID:7783632","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex","termid":"GO:0009330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA topoisomerase IV complex","termid":"GO:0009340"}


id: PBO:0005201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis16","termid":"PBO:0005201"}


id: PBO:0074611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 15","termid":"PBO:0074611"}


id: PR:O42993
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fkh1 gene.","definition_xrefs":["UniProtKB:O42993","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP12 peptidyl-prolyl cis-trans isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.17c","synonyms":[{"name":"FK506-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FKBP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PPIase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC24E9.17c","type":"related"},{"name":"Spom972h-fkh1","type":"exact"}],"termid":"PR:O42993"}


id: PBO:0042758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 20","termid":"PBO:0042758"}


id: GO:0034341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon.","definition_xrefs":["ISBN:0126896631","GOC:add","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"},{"relation_name":"part_of","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to type II interferon","synonyms":[{"name":"response to gamma-interferon","type":"related"},{"name":"response to immune interferon","type":"exact"},{"name":"response to interferon-gamma","type":"broad"},{"name":"response to type II IFN","type":"broad"}],"termid":"GO:0034341"}


id: PBO:0018072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily protein","termid":"PBO:0018072"}


id: PBO:0002069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin (predicted)","termid":"PBO:0002069"}


id: PR:Q9UT61
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha-mannosidase 2C1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11607:SF2","PRO:DNx","OMA:SCHPO01225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.05","secondary_identifiers":["UniProtKB:Q9UT61"],"synonyms":[{"name":"Spom972h-MAN2C1","type":"exact"},{"name":"alpha-D-mannoside mannohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT61"}


id: PBO:0075944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG2 antisense RNA 1","termid":"PBO:0075944"}


id: GO:0034748
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Par3, the tumor suppressor protein adenomatous polyposis coli (APC), and the kinesin-related protein KIF3A; involved in establishing neuronal cell polarity.","definition_xrefs":["PMID:15556865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Par3-APC-KIF3A complex","termid":"GO:0034748"}


id: PBO:0040013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 2","termid":"PBO:0040013"}


id: GO:0010393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galacturonan, a pectin polymer containing a backbone of alpha-(1->4)-linked D-galacturonic acid residues.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"galacturonan metabolic process","synonyms":[{"name":"galacturonan metabolism","type":"exact"}],"termid":"GO:0010393"}


id: PBO:0046983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member G, pseudogene","termid":"PBO:0046983"}


id: GO:0160004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ADP-ribosylation of the target protein.","definition_xrefs":["PMID:26673700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-D-ribose modification-dependent protein binding","termid":"GO:0160002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"poly-ADP-D-ribose modification-dependent protein binding","termid":"GO:0160004"}


id: FYPO:0005999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any transfer RNA (tRNA) primary transcript, tRNA precursor or processing intermediate, or mature tRNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"altered tRNA or precursor level","synonyms":[{"name":"abnormal tRNA or precursor level","type":"exact"},{"name":"altered tRNA or precursor accumulation","type":"related"},{"name":"altered tRNA or precursor level during mitotic cell cycle","type":"related"},{"name":"altered tRNA or precursor level during vegetative growth","type":"exact"},{"name":"altered tRNA or precursor transcript level","type":"exact"}],"termid":"FYPO:0005999"}


id: PBO:0072424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 29","termid":"PBO:0072424"}


id: PBO:0058154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4449","termid":"PBO:0058154"}


id: GO:0050505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroquinone + UDP-D-glucose = H+ + hydroquinone O-beta-D-glucopyranoside + UDP.","definition_xrefs":["EC:2.4.1.218","RHEA:12560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroquinone glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05769","MetaCyc:2.4.1.218-RXN"],"synonyms":[{"name":"UDP-glucose:hydroquinone-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:hydroquinone-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"arbutin synthase activity","type":"related"},{"name":"hydroquinone:O-glucosyltransferase activity","type":"related"}],"termid":"GO:0050505"}


id: PBO:0088228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydantoin racemase family","termid":"PBO:0088228"}


id: PBO:0001788
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predominantly uniformly single copy (one ot one)","termid":"PBO:0001788"}


id: PBO:0085364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoribosylanthranilate isomerase; catalyzes the third step in tryptophan biosynthesis; in 2004, the sequence of TRP1 from strain S228C was updated by changing the previously annotated internal STOP (TAA) to serine (TCA); enhances vegetative growth at low and high temperatures when used as an auxotrophic marker in strains such as W303","termid":"PBO:0085364"}


id: GO:0052200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the defenses of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to defenses of other organism","termid":"GO:0052173"},{"relation_name":"is_a","term_name":"response to host","termid":"GO:0075136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to host defenses","secondary_identifiers":["GO:0075140","GO:0075145"],"synonyms":[{"name":"maintenance of symbiont tolerance to host defense molecules","type":"narrow"},{"name":"response of symbiont to host defense molecules","type":"narrow"},{"name":"response to host defense molecules","type":"narrow"}],"termid":"GO:0052200"}


id: GO:1903514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ion from endoplasmic reticulum to cytosol.","definition_xrefs":["GOC:TermGenie","PMID:16402920","GO_REF:0000078","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"release of sequestered calcium ion into cytosol by endoplasmic reticulum","synonyms":[{"name":"calcium ion transport from endoplasmic reticulum to cytosol","type":"broad"}],"termid":"GO:1903514"}


id: PBO:0076904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX101 pseudogene 1","termid":"PBO:0076904"}


id: PBO:0003223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S27 (predicted)","termid":"PBO:0003223"}


id: GO:0061622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways through a glucose-1-phosphate intermediate that result in the catabolism of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP.","definition_xrefs":["ISBN:0201090910","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process through glucose-6-phosphate","termid":"GO:0061620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0055086","GO:0005975","GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"glycolytic process through glucose-1-phosphate","termid":"GO:0061622"}


id: PBO:0074133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 34 member 1","termid":"PBO:0074133"}


id: PBO:0028267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_RNA_level","termid":"PBO:0028267"}


id: PBO:0068015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 320","termid":"PBO:0068015"}


id: PBO:0029313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_pre-autophagosomal_structure","termid":"PBO:0029313"}


id: FYPO:0006756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at one or more specific promoter element(s) is increased when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:28934464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"increased chromatin binding at promoter element during glucose starvation","synonyms":[{"name":"increased chromatin binding at promoter element during glucose depletion","type":"exact"},{"name":"increased chromatin binding at promoter element during glucose deprivation","type":"related"}],"termid":"FYPO:0006756"}


id: PBO:0059863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin 1","termid":"PBO:0059863"}


id: PBO:0047735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 1","termid":"PBO:0047735"}


id: PBO:0059070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 1","termid":"PBO:0059070"}


id: PBO:0053107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCK proto-oncogene, Src family tyrosine kinase","termid":"PBO:0053107"}


id: GO:1901974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glycerate from one side of a membrane to the other.","definition_xrefs":["PMID:23382251","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"aldonate transmembrane transporter activity","termid":"GO:0042879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glycerate transmembrane transporter activity","termid":"GO:1901974"}


id: GO:0050667
data:
  {"annotated_genes":["SJAG_04042","SJAG_04459","SJAG_02972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86144,98827],"is_not":false,"summary":null,"term":"GO:0050667"},{"annotations":[106598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving homocysteine, the amino acid alpha-amino-gamma-mercaptobutanoic acid. Homocysteine is an important intermediate in the metabolic reactions of its S-methyl derivative, methionine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02972":null,"SJAG_04042":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"homocysteine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Hcy metabolic process","type":"exact"},{"name":"Hcy metabolism","type":"exact"},{"name":"homocysteine metabolism","type":"exact"}],"termid":"GO:0050667","terms_by_termid":{"GO:0050667":null,"GO:0071269":null}}


id: PBO:0064983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich acidic protein 1","termid":"PBO:0064983"}


id: GO:0071179
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch1 (ICN1), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-3 (MAML3); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MAML3-RBP-Jkappa-ICN1 complex","synonyms":[{"name":"MAML3-RBP-Jkappa-Notch1 complex","type":"exact"}],"termid":"GO:0071179"}


id: PBO:0079038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (AAC) 7-1","termid":"PBO:0079038"}


id: PBO:0044159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD small phosphatase like 2","termid":"PBO:0044159"}


id: GO:0060427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of lung connective tissue from an initial condition to its mature state. This process begins with the formation of lung connective tissue and ends with the mature structure. The lung connective tissue is a material made up of fibers forming a framework and support structure for the lungs.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung connective tissue development","synonyms":[{"name":"pulmonary connective tissue development","type":"exact"}],"termid":"GO:0060427"}


id: GO:0009060
data:
  {"annotated_genes":["SJAG_MIT03","SJAG_03163","SJAG_01062","SJAG_02564","SJAG_03064","SJAG_02158","SJAG_01671","SJAG_07003","SJAG_05629","SJAG_07007","SJAG_02744","SJAG_00438","SJAG_05204","SJAG_MIT13","SJAG_04122","SJAG_MIT09","SJAG_01077","SJAG_00260","SJAG_00601","SJAG_03490","SJAG_01190","SJAG_01355","SJAG_00542","SJAG_00985","SJAG_02646","SJAG_MIT37","SJAG_03588","SJAG_02006","SJAG_00133","SJAG_01630","SJAG_01922","SJAG_00976","SJAG_03290","SJAG_06382","SJAG_07006","SJAG_01763","SJAG_02592","SJAG_00080","SJAG_02504","SJAG_00836","SJAG_02598","SJAG_MIT04","SJAG_00698","SJAG_01539","SJAG_02433","SJAG_MIT20","SJAG_04843","SJAG_MIT15","SJAG_01895","SJAG_03813","SJAG_03920","SJAG_01490","SJAG_03114","SJAG_04152","SJAG_00915","SJAG_01402","SJAG_02398","SJAG_00755","SJAG_02464","SJAG_03925","SJAG_02105","SJAG_00866","SJAG_01524","SJAG_01753"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83563,91109,95130,104683,110330,114523],"is_not":false,"summary":null,"term":"GO:0009060"},{"annotations":[112197],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042775"},{"annotations":[110317,84332,112908,88050,104375,110743,111538,115105,115129,115084,112198],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006123"},{"annotations":[108949],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006120"},{"annotations":[84945,85306,109294,112848],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006121"},{"annotations":[100579,113753,104052,109496,86093,100177,114223,111184,115109,112199],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006122"},{"annotations":[92828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006119"},{"annotations":[99757,97914,101084,103994,111931,99786,115122,103904,85252,89370,89970,88944,99132,104878,90945,115118,115112],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042776"},{"annotations":[93732,105785,90479,107973],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903715"},{"annotations":[108161,109296,90562,111826,86036,109547,95562,106220,84946,85307,69911,102821,111058,112650,112849],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006099"}]},"cv_name":"biological_process","definition":"The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor.","definition_xrefs":["ISBN:0140513590","GOC:das","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00133":null,"SJAG_00260":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00601":null,"SJAG_00698":null,"SJAG_00755":null,"SJAG_00836":null,"SJAG_00866":null,"SJAG_00915":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01062":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01402":null,"SJAG_01490":null,"SJAG_01524":null,"SJAG_01539":null,"SJAG_01630":null,"SJAG_01671":null,"SJAG_01753":null,"SJAG_01763":null,"SJAG_01895":null,"SJAG_01922":null,"SJAG_02006":null,"SJAG_02105":null,"SJAG_02158":null,"SJAG_02398":null,"SJAG_02433":null,"SJAG_02464":null,"SJAG_02504":null,"SJAG_02564":null,"SJAG_02592":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03064":null,"SJAG_03114":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03490":null,"SJAG_03588":null,"SJAG_03813":null,"SJAG_03920":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04152":null,"SJAG_04843":null,"SJAG_05204":null,"SJAG_05629":null,"SJAG_06382":null,"SJAG_07003":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT09":null,"SJAG_MIT13":null,"SJAG_MIT15":null,"SJAG_MIT20":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"aerobic respiration","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cellular_respiration#Aerobic_respiration","MetaCyc:PWY-3781"],"termid":"GO:0009060","terms_by_termid":{"GO:0006099":null,"GO:0006119":null,"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null,"GO:0009060":null,"GO:0042775":null,"GO:0042776":null,"GO:1903715":null}}


id: PBO:0076478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAP binding protein","termid":"PBO:0076478"}


id: PBO:0082252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the translation initiation factor eIF2; eIF2 is involved in identification of the start codon; phosphorylation of Ser51 is required for regulation of translation by inhibiting the exchange of GDP for GTP; protein abundance increases in response to DNA replication stress","termid":"PBO:0082252"}


id: PBO:0072670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 3","termid":"PBO:0072670"}


id: GO:0071430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains pre-microRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-miRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071430)","synonyms":[{"name":"pre-microRNA-containing RNP export from nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex export from nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071430"}


id: GO:1904115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any cytoplasm that is part of a axon.","definition_xrefs":["PMID:18667152","GOC:TermGenie","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection cytoplasm","termid":"GO:0120111"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axon cytoplasm","synonyms":[{"name":"axoplasm","type":"exact"}],"termid":"GO:1904115"}


id: PBO:0085680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in prospore membrane morphogenesis; peripheral membrane protein that localizes to the prospore membrane and at numerous membrane contact sites; involved in sporulation, vacuolar protein sorting, prospore membrane formation during sporulation, and protein-Golgi retention; required for mitochondrial integrity; contains a PH-like domain; homologous to human CHAC and COH1 which are involved in Chorea-acanthocytosis and Cohen syndrome, respectively","termid":"PBO:0085680"}


id: PBO:0029172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_protein_in_growth_medium","termid":"PBO:0029172"}


id: FYPO:0005013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 8 of histone H4 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H4 acetylation during vegetative growth","termid":"FYPO:0005011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H4-K8 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H4-K8 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H4K8 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H4-K8 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005013"}


id: GO:0045770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asymmetric cell division.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asymmetric cell division","termid":"GO:0009786"},{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"positively_regulates","term_name":"asymmetric cell division","termid":"GO:0008356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of asymmetric cell division","synonyms":[{"name":"activation of asymmetric cell division","type":"narrow"},{"name":"stimulation of asymmetric cell division","type":"narrow"},{"name":"up regulation of asymmetric cell division","type":"exact"},{"name":"up-regulation of asymmetric cell division","type":"exact"},{"name":"upregulation of asymmetric cell division","type":"exact"}],"termid":"GO:0045770"}


id: GO:0071581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zinc ion import.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of zinc ion transmembrane transport","termid":"GO:0071580"},{"relation_name":"regulates","term_name":"zinc ion import across plasma membrane","termid":"GO:0071578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of zinc ion transmembrane import","termid":"GO:0071581"}


id: PBO:0025464
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this protein is shorter than the S. cerevisiae ortholog and missing the enoyl-CoA hydratase domain. Other genes for fatty acid beta-oxidation are also absent","termid":"PBO:0025464"}


id: PBO:0074893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 68","termid":"PBO:0074893"}


id: GO:0015196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-tryptophan from one side of a membrane to the other. Tryptophan is 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-tryptophan transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-8870352","GO:0005299"],"synonyms":[{"name":"L-tryptophan permease activity","type":"exact"},{"name":"L-tryptophan transporter activity","type":"broad"},{"name":"valine/tyrosine/tryptophan permease activity","type":"narrow"}],"termid":"GO:0015196"}


id: PBO:0059227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 8","termid":"PBO:0059227"}


id: PBO:0080413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS41 subunit of HOPS complex","termid":"PBO:0080413"}


id: GO:0042785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of active immune avoidance which works by regulating host cytokine networks, e.g. by secreting proteins that mimic cytokine receptors that act to sequester host cytokines and inhibit action. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:9275219","PMID:9600978","PMID:10620615"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion of host immune response via modulation of host cytokine network (obsolete GO:0042785)","synonyms":[{"name":"active evasion of host immune response via regulation of host cytokine network","type":"related"},{"name":"active evasion of immune response of other organism via regulation of cytokine network of other organism involved in symbiotic interaction","type":"broad"},{"name":"active immune evasion via modulation of host cytokine network","type":"exact"},{"name":"active immune evasion via regulation of host cytokine network","type":"exact"},{"name":"evasion of host immune response via regulation of host cytokine network","type":"exact"}],"termid":"GO:0042785"}


id: PBO:0064104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIWIL4 antisense RNA 1","termid":"PBO:0064104"}


id: PBO:0034221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_muscle_insertion","termid":"PBO:0034221"}


id: PBO:0113354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for production of 4-hydroxy-5-methylfuran-3(2H)-one (MHF); cupin superfamily protein; has structural resemblance to plant storage and ligand binding proteins (canavalin, glycinin, auxin binding protein) and to some enzymes (epimerase, germin); localizes to nucleus and cytoplasm","termid":"PBO:0113354"}


id: PBO:0111531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 228","termid":"PBO:0111531"}


id: PBO:0088644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export chaperone","termid":"PBO:0088644"}


id: PBO:0080215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vimentin","termid":"PBO:0080215"}


id: GO:0044613
data:
  {"annotated_genes":["SJAG_02274","SJAG_02210","SJAG_01013","SJAG_02425","SJAG_03593","SJAG_04721"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85546,87816,90089,91078,97487,102234],"is_not":false,"summary":null,"term":"GO:0044613"}]},"cv_name":"cellular_component","definition":"The central substructure of the nuclear pore complex (NPC), through which nucleocytoplasmic transport of RNAs, proteins and small molecules occurs. The central transport channel is filled with FG-nucleoporins, which form a selective barrier and provide a series of binding sites for transporter proteins. Characterized S. cerevisiae FG-nucleoporins include Nup159p, Nup145Np, Nup116p, Nup100p, Nsp1p, Nup57p, Nup49p, Nup42p, Nup53p, Nup59p/Asm4p, Nup60p and Nup1. Characterized vertebrate FG-nucleoporins include Nup214, Nup98, Nup62, Nup54, Nup58/45, NLP1, and Nup153.","definition_xrefs":["PMID:20947011","PMID:22419078","GOC:dgf","PMID:19524430","PMID:18046406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_02210":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_03593":null,"SJAG_04721":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005643"}],"interesting_parent_ids":["GO:0005634","GO:0005643","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nuclear pore central transport channel","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"karyopherin docking complex","type":"related"},{"name":"nuclear pore central channel","type":"exact"},{"name":"nuclear pore central plug","type":"exact"},{"name":"nuclear pore transport channel","type":"exact"}],"termid":"GO:0044613","terms_by_termid":{"GO:0044613":null}}


id: SO:0000470
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Germline genomic DNA of an immunoglobulin/T-cell receptor gene including J-region with 5' UTR (SO:0000204) and 3' UTR (SO:0000205), also designated as J-segment.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_segment","termid":"SO:0000460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_gene_segment","synonyms":[{"name":"INSDC_feature:J_segment","type":"exact"},{"name":"J gene","type":"exact"},{"name":"J-GENE","type":"exact"}],"termid":"SO:0000470"}


id: PBO:0069508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 776, pseudogene","termid":"PBO:0069508"}


id: GO:0043746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N2-acetyl-L-aminoadipate semialdehyde + L-glutamate = 2-oxoglutarate + N2-acetyl-L-lysine.","definition_xrefs":["IMG:01450"],"gene_count":0,"genotype_count":0,"name":"obsolete N2-acetyl-L-lysine aminotransferase activity (obsolete GO:0043746)","synonyms":[{"name":"N-acetyl-lysine aminotransferase activity","type":"exact"}],"termid":"GO:0043746"}


id: GO:0140037
data:
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id: PBO:0005353
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id: GO:0046872
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ion binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"heavy metal binding","type":"narrow"},{"name":"metal binding","type":"exact"}],"termid":"GO:0046872","terms_by_termid":{"GO:0000287":null,"GO:0005506":null,"GO:0005507":null,"GO:0005509":null,"GO:0008198":null,"GO:0008199":null,"GO:0008270":null,"GO:0016151":null,"GO:0030145":null,"GO:0030955":null,"GO:0046870":null,"GO:0046872":null,"GO:0046911":null,"GO:0046914":null}}


id: GO:0044414
data:
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id: FYPO:0002376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to osmotic stress","synonyms":[{"name":"decreased phosphorylation during cellular response to osmotic stress","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0002376"}


id: PBO:0045795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like repeats and discoidin domains 3","termid":"PBO:0045795"}


id: GO:0075509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any endocytosis that is involved in the uptake of a virus into a host cell.","definition_xrefs":["GOC:bf","VZ:977","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"},{"relation_name":"is_a","term_name":"transport of virus","termid":"GO:0046794"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"endocytosis involved in viral entry into host cell","synonyms":[{"name":"viral entry into host cell via endocytosis","type":"related"},{"name":"viral penetration via endocytosis followed by endosome disruption","type":"exact"},{"name":"virus endocytosis by host","type":"exact"}],"termid":"GO:0075509"}


id: PBO:0062551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily Q member 1","termid":"PBO:0062551"}


id: GO:0090335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of brown fat cell differentiation. Brown fat cell differentiation is the process in which a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fat cell differentiation","termid":"GO:0045598"},{"relation_name":"regulates","term_name":"brown fat cell differentiation","termid":"GO:0050873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of brown fat cell differentiation","termid":"GO:0090335"}


id: PBO:0025512
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lyase deficiency","termid":"PBO:0025512"}


id: PBO:0061832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 1","termid":"PBO:0061832"}


id: PBO:0082104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA-peroxin; heterodimerizes with AAA-peroxin Pex1p and participates in the recycling of peroxisomal signal receptor Pex5p from the peroxisomal membrane to the cystosol; mutations in human PEX6 can lead to severe peroxisomal disorders and early death","termid":"PBO:0082104"}


id: PBO:0113030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the DNA polymerase I alpha-primase complex; required for the initiation of DNA replication during mitotic DNA synthesis and premeiotic DNA synthesis; H3-H4 histone chaperone, downstream of Pol32p, involved in the transfer of parental histones to the lagging strand during DNA replication","termid":"PBO:0113030"}


id: GO:0106276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bilirubin IXalpha + NAD+ = biliverdin IXalpha + NADH+ H+.","definition_xrefs":["RHEA:15797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliverdin reductase [NAD(P)+] activity","termid":"GO:0004074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"biliberdin reductase (NAD+) activity","secondary_identifiers":["https://github.com/geneontology/go-ontology/issues/28070"],"termid":"GO:0106276"}


id: MOD:00390
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-decanoyl-L-serine.","definition_xrefs":["PubMed:12630926","Unimod:449#S","RESID:AA0385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-decanoylated residue","termid":"MOD:00668"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-decanoyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(decanoyloxy)propanoic acid","type":"exact"},{"name":"Decanoyl","type":"related"},{"name":"L-serine decanoate ester","type":"exact"},{"name":"LIPID O-decanoyl serine","type":"exact"},{"name":"O-decanoyl-L-serine","type":"exact"},{"name":"O-decanoylated L-serine","type":"exact"},{"name":"O3-decanoyl-L-serine","type":"exact"},{"name":"ODecSer","type":"exact"},{"name":"lipid","type":"related"}],"termid":"MOD:00390"}


id: PBO:0043887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticotropin releasing hormone","termid":"PBO:0043887"}


id: PBO:0083491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YDL185W; identified by homology with hemiascomycetous yeast species","termid":"PBO:0083491"}


id: PBO:0045084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like canonical Notch ligand 1","termid":"PBO:0045084"}


id: PR:000049981
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein rad9 (Schizosaccharomyces pombe) that has been phosphorylated on a residue equivalent to Thr-412 of the amino acid sequence represented by UniProtKB:P26306. Example: UniProtKB:P26306, Thr-412, MOD:00046.","definition_xrefs":["PMID:21561865","PomBase:MAH","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","termid":"PR:000044575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad9 phosphorylated 2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC664.07c","termid":"PR:000049981"}


id: FYPO:0002718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell septum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to septum","synonyms":[{"name":"abnormal protein localisation to septum","type":"exact"},{"name":"abnormal protein localization to cell septum","type":"exact"},{"name":"abnormal protein localization to division septum","type":"exact"},{"name":"abnormal protein localization to septum during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to septum during vegetative growth","type":"exact"}],"termid":"FYPO:0002718"}


id: GO:0106301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to cis-5,6-epoxyeicosatrienoic acid.","definition_xrefs":["PMID:8631948","RHEA:49936","PMID:10491410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonic acid epoxygenase activity","termid":"GO:0008392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"arachidonic acid 5,6-epoxygenase activity","termid":"GO:0106301"}


id: PBO:0054687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2096","termid":"PBO:0054687"}


id: FYPO:0005099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A) polymerase activity (EC name polynucleotide adenylyltransferase activity) is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal poly(A) polymerase activity","termid":"FYPO:0005098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased poly(A) polymerase activity","synonyms":[{"name":"decreased PAP activity","type":"exact"},{"name":"decreased polynucleotide adenylyltransferase activity","type":"exact"},{"name":"reduced poly(A) polymerase activity","type":"exact"}],"termid":"FYPO:0005099"}


id: GO:0006787
data:
  {"annotated_genes":["SJAG_00366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"},{"relation_name":"is_a","term_name":"tetrapyrrole catabolic process","termid":"GO:0033015"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"porphyrin-containing compound catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"porphyrin breakdown","type":"related"},{"name":"porphyrin catabolic process","type":"related"},{"name":"porphyrin catabolism","type":"related"},{"name":"porphyrin degradation","type":"related"}],"termid":"GO:0006787","terms_by_termid":{"GO:0042167":null}}


id: PBO:0108968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 1","termid":"PBO:0108968"}


id: PBO:0043467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNOT6L pseudogene 1","termid":"PBO:0043467"}


id: PBO:0053577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 598","termid":"PBO:0053577"}


id: GO:0004869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a cysteine-type endopeptidase.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase inhibitor activity","termid":"GO:0004866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234","GO:0004857","GO:0140678"],"is_obsolete":false,"name":"cysteine-type endopeptidase inhibitor activity","secondary_identifiers":["GO:0004870"],"synonyms":[{"name":"cystatin","type":"narrow"},{"name":"cysteine protease inhibitor activity","type":"narrow"},{"name":"thiol protease inhibitor","type":"narrow"}],"termid":"GO:0004869"}


id: GO:0019117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a dihydroxyfluorene + O2 = the corresponding 2-hydroxy-4-(oxo-1,3-dihydro-2H-inden-ylidene) but-2-enoic acid.","definition_xrefs":["UM-BBD_reactionID:r0422","GOC:mah","UM-BBD_reactionID:r0415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dihydroxyfluorene dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0019117"}


id: GO:1903087
data:
  {"annotated_genes":["SJAG_04003","SJAG_03544","SJAG_03200","SJAG_04558","SJAG_01760"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86246,103518,108730,108935,111210],"is_not":false,"summary":null,"term":"GO:1903087"}]},"cv_name":"biological_process","definition":"Any spindle pole body duplication that is involved in the mitotic cell cycle.","definition_xrefs":["GO_REF:0000060","GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body duplication","termid":"GO:0030474"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01760":null,"SJAG_03200":null,"SJAG_03544":null,"SJAG_04003":null,"SJAG_04558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044085","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"mitotic spindle pole body duplication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle pole body assembly involved in mitotic cell cycle","type":"exact"},{"name":"spindle pole body biogenesis involved in mitotic cell cycle","type":"exact"},{"name":"spindle pole body biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"spindle pole body duplication associated with nuclear envelope involved in mitotic cell cycle","type":"exact"},{"name":"spindle pole body duplication in cytoplasm involved in mitotic cell cycle","type":"exact"},{"name":"spindle pole body duplication involved in mitotic cell cycle","type":"exact"},{"name":"spindle pole body formation involved in mitotic cell cycle","type":"exact"},{"name":"spindle pole body replication involved in mitotic cell cycle","type":"exact"}],"termid":"GO:1903087","terms_by_termid":{"GO:1903087":null}}


id: GO:0061725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipid droplets and hydrolysis of stored triglycerides occurring through the orchestrated activation of cytosolic lipases.","definition_xrefs":["GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular lipid catabolic process","termid":"GO:0044242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"cytosolic lipolysis","termid":"GO:0061725"}


id: PBO:0017408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-improper_part_of","termid":"PBO:0017408"}


id: PBO:0078589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 2, Y-linked","termid":"PBO:0078589"}


id: FYPO:0000901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A  microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule growth (polymerization), catastrophe (the transition from growth to shrinkage), shrinkage (depolymerization), or rescue (the transition from shrinkage to growth) is abnormal.","definition_xrefs":["GO:0031109","PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule dynamics during vegetative growth","synonyms":[{"name":"abnormal microtubule growth or shrinkage during vegetative growth","type":"narrow"},{"name":"abnormal microtubule polymerisation or depolymerisation during vegetative growth","type":"narrow"},{"name":"abnormal microtubule polymerization or depolymerization during vegetative growth","type":"narrow"}],"termid":"FYPO:0000901"}


id: GO:0098989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by glutamate binding to an NMDA-selective glutamate receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:dos","ISBN:9780071120005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic glutamate receptor signaling pathway","termid":"GO:0035235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"NMDA selective glutamate receptor signaling pathway","termid":"GO:0098989"}


id: PBO:0041013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bactericidal permeability increasing protein","termid":"PBO:0041013"}


id: PBO:0088900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, involved in mitochondrial gene expression","termid":"PBO:0088900"}


id: PBO:0040807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BicC family RNA binding protein 1","termid":"PBO:0040807"}


id: GO:1904081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in neuron differentiation.","definition_xrefs":["GO_REF:0000060","GOC:kmv","PMID:24353061","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in neuron differentiation (obsolete GO:1904081)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in neuron differentiation","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in neuron differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global involved in neuron differentiation","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"}],"termid":"GO:1904081"}


id: GO:0033031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of neutrophil apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"regulation of neutrophil apoptotic process","termid":"GO:0033029"},{"relation_name":"is_a","term_name":"positive regulation of myeloid cell apoptotic process","termid":"GO:0033034"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"positively_regulates","term_name":"neutrophil apoptotic process","termid":"GO:0001781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil apoptotic process","synonyms":[{"name":"activation of neutrophil apoptosis","type":"narrow"},{"name":"positive regulation of neutrophil apoptosis","type":"narrow"},{"name":"stimulation of neutrophil apoptosis","type":"narrow"},{"name":"up regulation of neutrophil apoptosis","type":"exact"},{"name":"up-regulation of neutrophil apoptosis","type":"exact"},{"name":"upregulation of neutrophil apoptosis","type":"exact"}],"termid":"GO:0033031"}


id: PBO:0031848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spore_morphology","termid":"PBO:0031848"}


id: SO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An absolute reference to the strand. When a chromosome has p and q arms, the Watson strand is the strand whose 5'-end is on the short arm of the chromosome. Of note, the term 'plus strand' is typically based on a reference sequence where it's preferred for the plus strand to be the Watson strand, but might not be and 'plus strand' is therefore not an exact synonym.","definition_xrefs":["PMID:21303550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Watson_strand","synonyms":[{"name":"Forward strand","type":"exact"},{"name":"Plus strand","type":"broad"},{"name":"Top strand","type":"exact"},{"name":"Watson strand","type":"exact"}],"termid":"SO:0002262"}


id: GO:0140962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of a chemical within extracellular body fluids, such as blood, xylem or phloem, of a multicellular organism. This is distinct from maintenance of cellular homeostasis, which occurs within a cell.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"},{"relation_name":"is_a","term_name":"chemical homeostasis","termid":"GO:0048878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal-level chemical homeostasis","synonyms":[{"name":"multicellular organism level chemical homeostasis","type":"exact"},{"name":"organismal level chemical homeostasis","type":"exact"}],"termid":"GO:0140962"}


id: GO:0070701
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular region part that consists of a protective layer of mucus secreted by epithelial cells lining tubular organs of the body such as the colon or secreted into fluids such as saliva. Mucus is a viscous slimy secretion consisting of mucins (i.e. highly glycosylated mucin proteins) and various inorganic salts dissolved in water, with suspended epithelial cells and leukocytes.","definition_xrefs":["GOC:mm2","PMID:18806221","GOC:mah","Wikipedia:Mucin","PMID:19432394","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"mucus layer","synonyms":[{"name":"extracellular proteinaceous gel","type":"broad"},{"name":"mucous","type":"exact"},{"name":"mucous layer","type":"exact"},{"name":"mucus","type":"exact"}],"termid":"GO:0070701"}


id: PBO:0034203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-determined_by_part_of","termid":"PBO:0034203"}


id: GO:0140306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of recognizing mature outer membrane lipoproteins in the inner membrane and releasing from the inner membrane so that they can be transported across the periplasmic space to their target location, the outer membrane. This function exists in diderm bacteria, mediated by the LolCDE complex.","definition_xrefs":["PMID:21670534","PMID:10783239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transporter activity","termid":"GO:0140318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0140318","GO:0003674"],"is_obsolete":false,"name":"lipoprotein releasing activity","termid":"GO:0140306"}


id: PBO:0086034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, essential for stationary phase survival; not required for growth on nonfermentable carbon sources; possibly linked with vacuolar transport","termid":"PBO:0086034"}


id: SO:0000147
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the transcript sequence within a gene which is not removed from the primary RNA transcript by RNA splicing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon","secondary_identifiers":["http://en.wikipedia.org/wiki/Exon"],"synonyms":[{"name":"INSDC_feature:exon","type":"exact"}],"termid":"SO:0000147"}


id: PBO:0077561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 268","termid":"PBO:0077561"}


id: PBO:0031083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleic_acid_metabolism_phenotype","termid":"PBO:0031083"}


id: GO:0008254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3'-ribonucleotide + H2O = a ribonucleoside + phosphate.","definition_xrefs":["EC:3.1.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidase activity","termid":"GO:0008252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"3'-nucleotidase activity","secondary_identifiers":["MetaCyc:3-NUCLEOTID-RXN","RHEA:10144"],"synonyms":[{"name":"3' nucleotidase activity","type":"exact"},{"name":"3'-mononucleotidase activity","type":"related"},{"name":"3'-phosphatase activity","type":"related"},{"name":"3'-ribonucleotidase activity","type":"related"},{"name":"3'-ribonucleotide phosphohydrolase activity","type":"related"}],"termid":"GO:0008254"}


id: GO:0002117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the amphibian larva over time, from its formation to the mature structure. Amphibian larvae, sometimes called pollywogs or tadpoles, hatch from eggs and begin to grow limbs and other adult physical features at various times, depending on the species, before they metamorphose into the adult form.","definition_xrefs":["GOC:bf","PMID:27143402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval development","termid":"GO:0002164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amphibian larval development","termid":"GO:0002117"}


id: PR:P87319
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps1301 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 13a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.01c","synonyms":[{"name":"Spom972h-vps1301","type":"exact"}],"termid":"PR:P87319"}


id: PR:O59713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diphthamide biosynthesis protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03685","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.05","secondary_identifiers":["UniProtKB:O59713"],"synonyms":[{"name":"Spom972h-DPH1","type":"exact"}],"termid":"PR:O59713"}


id: FYPO:0001414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sulfide (S2-). Cells stop growing (and may die) at a concentration of sulfide ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to sulfide","synonyms":[{"name":"hypersensitive to sulfide","type":"exact"},{"name":"sensitive to sulfide during mitotic cell cycle","type":"related"},{"name":"sensitive to sulfide during vegetative growth","type":"exact"},{"name":"sensitive to sulfide ions","type":"exact"},{"name":"sensitive to sulphide","type":"exact"}],"termid":"FYPO:0001414"}


id: GO:2000449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of CD8-positive, alpha-beta T cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell extravasation","termid":"GO:2000407"},{"relation_name":"regulates","term_name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000449"}


id: GO:0050795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli.","definition_xrefs":["GOC:go_curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of behavior","synonyms":[{"name":"regulation of behaviour","type":"exact"}],"termid":"GO:0050795"}


id: GO:0007018
data:
  {"annotated_genes":["SJAG_05220","SJAG_01775","SJAG_01371","SJAG_04597","SJAG_02848","SJAG_02286","SJAG_02731","SJAG_02045","SJAG_01662","SJAG_03540","SJAG_01370","SJAG_03683","SJAG_03835","SJAG_00851","SJAG_03673","SJAG_00794","SJAG_00918","SJAG_05266","SJAG_05319","SJAG_04076","SJAG_00332","SJAG_03073","SJAG_04143","SJAG_03437","SJAG_04884","SJAG_01546","SJAG_00042","SJAG_00368","SJAG_01805","SJAG_02624","SJAG_00113","SJAG_01224","SJAG_00773","SJAG_02761","SJAG_01211","SJAG_01863","SJAG_00397","SJAG_04745","SJAG_02814","SJAG_04387","SJAG_00140","SJAG_04003","SJAG_02431","SJAG_00930","SJAG_02509","SJAG_02336","SJAG_02561","SJAG_05185","SJAG_04001","SJAG_02737","SJAG_01613","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60853,85085,99647],"is_not":false,"summary":null,"term":"GO:0007018"},{"annotations":[114205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051305"},{"annotations":[107141,91310,97526,107490,96826,87939,113028,107311,93684,99359,99063,110046,87489,83894,87099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[98862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034643"},{"annotations":[97527,107313,102676],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[112011,96483,89898,91414,95321,114724,114207,105235,98539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"},{"annotations":[105999,90873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099606"},{"annotations":[95326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051012"},{"annotations":[95327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031534"},{"annotations":[99997,104349,96485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007079"},{"annotations":[97537],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0062168"},{"annotations":[105707,108226,110048,113032,97538,100113,103519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[95333,93760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[91312,87491,95334,93686,83898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[95335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031535"},{"annotations":[90518],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[99850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[100005,114728,104358,96489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[110189,85869,104976,87087,103596,92882,85265,94729,113003,96617,105984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[113033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140405"},{"annotations":[87250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010970"}]},"cv_name":"biological_process","definition":"A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.","definition_xrefs":["GOC:cjm","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02624":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_02848":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_03683":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04076":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_04745":null,"SJAG_04884":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule-based movement","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0007018","terms_by_termid":{"GO:0000743":null,"GO:0007018":null,"GO:0007079":null,"GO:0010970":null,"GO:0030989":null,"GO:0031534":null,"GO:0031535":null,"GO:0032118":null,"GO:0034643":null,"GO:0051012":null,"GO:0051305":null,"GO:0062168":null,"GO:0090561":null,"GO:0098863":null,"GO:0099117":null,"GO:0099606":null,"GO:0140210":null,"GO:0140405":null,"GO:1902854":null,"GO:1990571":null,"GO:1990976":null}}


id: GO:0102699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 2-methylpropionitrile + O2 + NADPH = 2-hydroxy-2-methylpropanenitrile + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-methylpropionitrile hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-5082","RHEA:51964"],"termid":"GO:0102699"}


id: GO:1903608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cytoplasmic stress granule.","definition_xrefs":["GOC:TermGenie","PMID:24755092","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cytoplasmic stress granule","synonyms":[{"name":"protein localisation in cytoplasmic stress granule","type":"exact"},{"name":"protein localisation to cytoplasmic stress granule","type":"exact"},{"name":"protein localization in cytoplasmic stress granule","type":"exact"},{"name":"protein localization to stress granule","type":"broad"}],"termid":"GO:1903608"}


id: PBO:0064786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1F antisense RNA 1","termid":"PBO:0064786"}


id: PBO:0058073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4291","termid":"PBO:0058073"}


id: PBO:0042877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 157","termid":"PBO:0042877"}


id: PBO:0002116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tryptophan","termid":"PBO:0002116"}


id: GO:2001168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H2B ubiquitination.","definition_xrefs":["PMID:12876293"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H2B ubiquitination (obsolete GO:2001168)","termid":"GO:2001168"}


id: PBO:0054480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1880","termid":"PBO:0054480"}


id: PBO:0087839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Third subunit of DNA polymerase delta; involved in chromosomal DNA replication; required for error-prone DNA synthesis in the presence of DNA damage and processivity; forms a complex with Rev3p, Rev7p and Pol31p; interacts with Hys2p, PCNA (Pol30p), and Pol1p","termid":"PBO:0087839"}


id: PBO:0028564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_intergenic_meiotic_recombination","termid":"PBO:0028564"}


id: PBO:0069980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1275, pseudogene","termid":"PBO:0069980"}


id: PBO:0070474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 9","termid":"PBO:0070474"}


id: PBO:0077833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP73 antisense RNA 1","termid":"PBO:0077833"}


id: GO:0050137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O2 + H+ + NADPH = 2 H2O + NADP+.","definition_xrefs":["RHEA:15173","EC:1.11.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"NADPH peroxidase activity","secondary_identifiers":["KEGG_REACTION:R00113","MetaCyc:NADPH-PEROXIDASE-RXN"],"synonyms":[{"name":"NADP peroxidase activity","type":"related"},{"name":"NADPH:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"TPN peroxidase activity","type":"related"},{"name":"TPNH peroxidase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide phosphate peroxidase activity","type":"related"},{"name":"triphosphopyridine nucleotide peroxidase activity","type":"related"}],"termid":"GO:0050137"}


id: PBO:0041335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 14","termid":"PBO:0041335"}


id: GO:1901060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of p-hydroxyphenyl lignin.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin biosynthetic process","termid":"GO:0009809"},{"relation_name":"is_a","term_name":"p-hydroxyphenyl lignin metabolic process","termid":"GO:1901058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"p-hydroxyphenyl lignin biosynthetic process","synonyms":[{"name":"H-lignin biosynthetic process","type":"exact"},{"name":"p-hydroxyphenyl lignin anabolism","type":"exact"},{"name":"p-hydroxyphenyl lignin biosynthesis","type":"exact"},{"name":"p-hydroxyphenyl lignin formation","type":"exact"},{"name":"p-hydroxyphenyl lignin synthesis","type":"exact"}],"termid":"GO:1901060"}


id: SO:0000528
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_cluster","synonyms":[{"name":"V D DJ cluster","type":"exact"},{"name":"V-D-(DJ)-CLUSTER","type":"exact"}],"termid":"SO:0000528"}


