# terms

id: PBO:0087466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a palmitoyltransferase; this complex adds a palmitoyl lipid moiety to heterolipidated substrates such as Ras1p and Ras2p through a thioester linkage; mutants partially mislocalize Ras2p to the vacuole; palmitoyltransferase is composed of Erf2p and Shr5p","termid":"PBO:0087466"}


id: PBO:0062437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 101 pseudogene","termid":"PBO:0062437"}


id: RO:HOM0000018
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that is characterized by an interspecies (horizontal) transfer since the common ancestor.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_xenology_relationship_with","synonyms":[{"name":"xenologous to","type":"exact"}],"termid":"RO:HOM0000018"}


id: PBO:0042500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 19","termid":"PBO:0042500"}


id: PBO:0062980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPN1 pseudogene 2","termid":"PBO:0062980"}


id: GO:0062168
data:
  {"annotated_genes":["SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97537],"is_not":false,"summary":null,"term":"GO:0062168"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of plus-end directed microtubule sliding.","definition_xrefs":["PMID:21892183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of plus-end directed microtubule sliding","termid":"GO:0062169"},{"relation_name":"negatively_regulates","term_name":"plus-end directed microtubule sliding","termid":"GO:0031535"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plus-end directed microtubule sliding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062168","terms_by_termid":{"GO:0062168":null}}


id: PBO:0066389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ like helicase 5","termid":"PBO:0066389"}


id: GO:0061373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillary axonal complex over time, from its formation to the mature structure. The mammillary axonal complex is formed by the axons from the lateral, medial mammillary and the dorsal premammillary nuclei which share a branching pattern. Every neuron gives off one axonal stem that bifurcates into 2 branches. One of the branches is directed dorsally to the thalamus and another caudally to the midbrain.","definition_xrefs":["GOC:dph","PMID:10662642","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary body development","termid":"GO:0021767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillary axonal complex development","termid":"GO:0061373"}


id: PBO:0007025
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds PLD site 5'-AGTTTACGTAATCT-3'","termid":"PBO:0007025"}


id: GO:0043276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Apoptosis triggered by inadequate or inappropriate adherence to substrate e.g. after disruption of the interactions between normal epithelial cells and the extracellular matrix.","definition_xrefs":["PMID:37667281","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anoikis","secondary_identifiers":["Wikipedia:Anoikis"],"synonyms":[{"name":"detachment induced cell death","type":"exact"},{"name":"suspension induced apoptosis","type":"exact"}],"termid":"GO:0043276"}


id: PBO:0049317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta pseudogene 2","termid":"PBO:0049317"}


id: PBO:0068359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF139 divergent transcript","termid":"PBO:0068359"}


id: FYPO:0006128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the second meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis II","termid":"FYPO:0003798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal duration of meiosis II","synonyms":[{"name":"normal duration of second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006128"}


id: GO:0099567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The directed change of free calcium ion concentration in the postsynaptic cytosol via the reversible binding of calcium ions to calcium-binding proteins in the cytosol thereby modulating the spatial and temporal dynamics of changes in postsynaptic cytosolic calcium concentrations.","definition_xrefs":["PMID:24442513","PMID:26190970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion binding involved in regulation of cytosolic calcium ion concentration","termid":"GO:0099510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0003674","GO:0046872","GO:0005488"],"is_obsolete":false,"name":"calcium ion binding involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium ion binding involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"},{"name":"postsynaptic calcium ion buffering","type":"exact"},{"name":"regulation of postsynaptic cytosolic calcium ion concentration by calcium ion buffering","type":"related"}],"termid":"GO:0099567"}


id: PBO:0053719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 929","termid":"PBO:0053719"}


id: PBO:0047696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR2 antisense RNA 1","termid":"PBO:0047696"}


id: PBO:0046993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 88 member D","termid":"PBO:0046993"}


id: PR:Q09861
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29E6.07 gene.","definition_xrefs":["UniProtKB:Q09861","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29E6.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.07","synonyms":[{"name":"Spom972h-SPAC29E6.07","type":"exact"}],"termid":"PR:Q09861"}


id: PBO:0005473
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nbs1-Interacting Protein 1","termid":"PBO:0005473"}


id: PBO:0070653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 24","termid":"PBO:0070653"}


id: PBO:0070543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 9","termid":"PBO:0070543"}


id: GO:1990304
data:
  {"annotated_genes":["SJAG_00910"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104844],"is_not":false,"summary":null,"term":"GO:1990304"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex consisting of MUB1, RAD6 and UBR2 components. It ubiquitinates, and targets for destruction, the RPN4 transcription factor, which upregulates the proteasome genes. The binding of MUB1 may position the RPN4 ubiquitylation site proximal to the Ubiquitin-RAD6 thioester and allow the transfer of Ubiquitin from RAD6 to RPN4. One of its components, MUB1, is a short-lived protein ubiquitinated by the UBR2-RAD6 ubiquitin conjugating enzyme.","definition_xrefs":["PMID:18070918","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00910":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MUB1-RAD6-UBR2 ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990304","terms_by_termid":{"GO:1990304":null}}


id: PBO:0002491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-glucan synthase Mok11","termid":"PBO:0002491"}


id: PBO:0045272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 19","termid":"PBO:0045272"}


id: GO:0060352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a cell adhesion molecule due to biosynthesis or secretion.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell adhesion molecule production","termid":"GO:0060352"}


id: PBO:0000392
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HXK1","termid":"PBO:0000392"}


id: GO:2000119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sodium-dependent phosphate transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of sodium-dependent phosphate transport","termid":"GO:2000118"},{"relation_name":"negatively_regulates","term_name":"sodium-dependent phosphate transport","termid":"GO:0044341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of sodium-dependent phosphate transport","termid":"GO:2000119"}


id: GO:0010823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a mitochondrion.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mitochondrion organization (obsolete GO:0010823)","synonyms":[{"name":"negative regulation of mitochondrion organisation","type":"exact"}],"termid":"GO:0010823"}


id: GO:0099520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any ion antiporter activity, occurring in the presynaptic membrane, that is involved in regulation of presynaptic membrane potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"monoatomic ion antiporter activity involved in regulation of presynaptic membrane potential","synonyms":[{"name":"ion antiporter activity involved in regulation of pre-synaptic membrane potential","type":"exact"},{"name":"ion antiporter activity involved in regulation of presynaptic membrane potential","type":"exact"}],"termid":"GO:0099520"}


id: GO:0016411
data:
  {"annotated_genes":["SJAG_01957","SJAG_04792","SJAG_03609","SJAG_03935","SJAG_04041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106623],"is_not":false,"summary":null,"term":"GO:0016411"},{"annotations":[86154,100077,87278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003841"},{"annotations":[110280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003846"},{"annotations":[110281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004144"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to an oxygen atom on the acylglycerol molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01957":null,"SJAG_03609":null,"SJAG_03935":null,"SJAG_04041":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"acylglycerol O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1482654","Reactome:R-HSA-1482647"],"termid":"GO:0016411","terms_by_termid":{"GO:0003841":null,"GO:0003846":null,"GO:0004144":null,"GO:0016411":null}}


id: GO:1904854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proteasome core complex.","definition_xrefs":["GOC:TermGenie","PMID:16096059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"proteasome core complex binding","synonyms":[{"name":"20S core complex binding","type":"narrow"},{"name":"20S proteasome binding","type":"narrow"},{"name":"PA28gamma-20S proteasome binding","type":"narrow"},{"name":"macropain binding","type":"exact"}],"termid":"GO:1904854"}


id: PBO:0090332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2' O-ribose methyltransferase Mrm2","termid":"PBO:0090332"}


id: PBO:0025491
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cockayne syndrome","termid":"PBO:0025491"}


id: GO:0014854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inactivity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to inactivity","termid":"GO:0014854"}


id: PBO:0038957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipogenesis regulatory factor","termid":"PBO:0038957"}


id: GO:0061468
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bound intermediate cleavage-stage structure of individual or groups of chromosomes that coalesces and fuses with other karyomeres to form a nucleus during interphase. Karyomere formation occurs in blastomeres undergoing rapid cell division.","definition_xrefs":["PMID:12734396","PMID:22863006","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"karyomere","termid":"GO:0061468"}


id: PBO:0059129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH6 divergent transcript","termid":"PBO:0059129"}


id: PBO:0067999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 301","termid":"PBO:0067999"}


id: PBO:0079902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UQCRB antisense RNA 1","termid":"PBO:0079902"}


id: GO:1903960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anion transmembrane transport.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transmembrane transport","termid":"GO:0034766"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic anion transport","termid":"GO:1903792"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"},{"relation_name":"negatively_regulates","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of anion transmembrane transport","synonyms":[{"name":"down regulation of anion transmembrane transport","type":"exact"},{"name":"down-regulation of anion transmembrane transport","type":"exact"},{"name":"downregulation of anion transmembrane transport","type":"exact"},{"name":"inhibition of anion transmembrane transport","type":"narrow"}],"termid":"GO:1903960"}


id: PBO:0076464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAMALIN antisense RNA 1","termid":"PBO:0076464"}


id: RO:0003003
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between protein a (a transcription factor) and DNA element b if and only if a activates the process of transcription of b.","direct_ancestors":[{"relation_name":"is_a","term_name":"activity_directly_positively_regulates_activity_of","termid":"RO:0002450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increases_expression_of","termid":"RO:0003003"}


id: PBO:0079393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 4B class IVb","termid":"PBO:0079393"}


id: PR:P28829
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- byr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P28829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase byr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1D7.05","synonyms":[{"name":"MAPK kinase kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAPKKK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-byr2","type":"exact"},{"name":"protein kinase ste8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P28829"}


id: PBO:0058793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7162","termid":"PBO:0058793"}


id: PBO:0079338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 23","termid":"PBO:0079338"}


id: PBO:0069732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1013, pseudogene","termid":"PBO:0069732"}


id: GO:0009092
data:
  {"annotated_genes":["SJAG_02290","SJAG_03671","SJAG_03102","SJAG_00395","SJAG_03152","SJAG_00881","SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97989,107179],"is_not":false,"summary":null,"term":"GO:0009092"},{"annotations":[108059,102071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[96767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[110036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving homoserine, alpha-amino-gamma-hydroxybutyric acid, an intermediate in the biosynthesis of cystathionine, threonine and methionine.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00395":null,"SJAG_00881":null,"SJAG_02290":null,"SJAG_03102":null,"SJAG_03152":null,"SJAG_03671":null,"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"homoserine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"homoserine metabolism","type":"exact"}],"termid":"GO:0009092","terms_by_termid":{"GO:0009090":null,"GO:0009092":null,"GO:0019279":null,"GO:0019280":null,"GO:0019281":null}}


id: PBO:0084814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; null mutant show severe fragmentation of mitochondria; expression is strongly induced by alpha factor; may have role in maintenance of mitochondrial morphology","termid":"PBO:0084814"}


id: PBO:0071256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 97","termid":"PBO:0071256"}


id: FYPO:0007767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of thiabendazole binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:33925026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased thiabendazole binding","synonyms":[{"name":"decreased TBZ binding","type":"exact"},{"name":"reduced TBZ binding","type":"exact"},{"name":"reduced thiabendazole binding","type":"exact"}],"termid":"FYPO:0007767"}


id: PBO:0088777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron responsive transcriptional regulator, peptidase family","termid":"PBO:0088777"}


id: GO:0070411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an inhibitory SMAD signaling protein.","definition_xrefs":["PMID:19114992","GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMAD binding","termid":"GO:0046332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"I-SMAD binding","termid":"GO:0070411"}


id: GO:1904426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of GTP binding.","definition_xrefs":["PMID:19066305","GO_REF:0000059","GOC:TermGenie","PMID:21454546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of binding","termid":"GO:0051099"},{"relation_name":"is_a","term_name":"regulation of GTP binding","termid":"GO:1904424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of GTP binding","synonyms":[{"name":"activation of GTP binding","type":"narrow"},{"name":"up regulation of GTP binding","type":"exact"},{"name":"up-regulation of GTP binding","type":"exact"},{"name":"upregulation of GTP binding","type":"exact"}],"termid":"GO:1904426"}


id: PBO:0061627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 10","termid":"PBO:0061627"}


id: PBO:0065846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11A, member RAS oncogene family pseudogene 2","termid":"PBO:0065846"}


id: PBO:0069520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 789, pseudogene","termid":"PBO:0069520"}


id: PBO:0089465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex subunit Pot1","termid":"PBO:0089465"}


id: FYPO:0003859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to wortmannin. Cells stop growing (and may die) at a concentration of wortmannin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to wortmannin","synonyms":[{"name":"hypersensitive to wortmannin","type":"exact"},{"name":"sensitive to wortmannin during mitotic cell cycle","type":"related"},{"name":"sensitive to wortmannin during vegetative growth","type":"exact"}],"termid":"FYPO:0003859"}


id: PBO:0050964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda receptor 1","termid":"PBO:0050964"}


id: RO:0002120
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":" Relation between a neuron and an anatomical structure (including cells) that it chemically synapses to.\\n        ","direct_ancestors":[{"relation_name":"is_a","term_name":"downstream_in_neural_circuit_with","termid":"RO:0000302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_to","termid":"RO:0002120"}


id: PBO:0110105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase, type II Lsb6","termid":"PBO:0110105"}


id: PBO:0075491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily F member 1","termid":"PBO:0075491"}


id: PBO:0073913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 4","termid":"PBO:0073913"}


id: GO:0061380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior colliculus over time, from its formation to the mature structure. The superior colliculus is also known as the optic tectum or simply tectum and is a paired structure that forms a major component of the vertebrate midbrain.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"corpora quadrigemina development","termid":"GO:0061378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior colliculus development","termid":"GO:0061380"}


id: GO:0003184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the pulmonary valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve morphogenesis","termid":"GO:0003179"},{"relation_name":"part_of","term_name":"pulmonary valve development","termid":"GO:0003177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary valve morphogenesis","termid":"GO:0003184"}


id: FYPO:0002741
data:
  {"alleles_by_uniquename":{"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell executes a mitotic cell cycle process normally (i.e. indistinguishably from wild type). A mitotic cell cycle process is any of the processes that form part of the mitotic cell cycle, and thereby ensures successive accurate and complete genome replication and chromosome segregation.","definition_xrefs":["PomBase:mah","GO:1903047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle","termid":"FYPO:0000411"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04883":null},"genotype_count":1,"genotypes_by_uniquename":{"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic cell cycle process","references_by_uniquename":{"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_04883"],"single_locus_genotype_uniquenames":["ptp4delta"],"termid":"FYPO:0002741","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001007":null}}


id: GO:1990248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of DNA damage.","definition_xrefs":["PMID:15660129"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to DNA damage (obsolete GO:1990248)","termid":"GO:1990248"}


id: GO:0090027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of monocyte chemotaxis.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte chemotaxis","termid":"GO:0002689"},{"relation_name":"is_a","term_name":"negative regulation of mononuclear cell migration","termid":"GO:0071676"},{"relation_name":"is_a","term_name":"regulation of monocyte chemotaxis","termid":"GO:0090025"},{"relation_name":"negatively_regulates","term_name":"monocyte chemotaxis","termid":"GO:0002548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte chemotaxis","termid":"GO:0090027"}


id: PBO:0063009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 1b catalytic subunit 3","termid":"PBO:0063009"}


id: PBO:0077213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily member 4","termid":"PBO:0077213"}


id: PBO:0079965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 3","termid":"PBO:0079965"}


id: GO:0004845
data:
  {"annotated_genes":["SJAG_04709","SJAG_04713","SJAG_04354","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83600,84587,88071,111006],"is_not":false,"summary":null,"term":"GO:0004845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + UMP = 5-phospho-alpha-D-ribose 1-diphosphate + uracil.","definition_xrefs":["EC:2.4.2.9","RHEA:13017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"uracil phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00966","MetaCyc:URACIL-PRIBOSYLTRANS-RXN"],"synonyms":[{"name":"UMP diphosphorylase activity","type":"related"},{"name":"UMP pyrophosphorylase activity","type":"related"},{"name":"UMP:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"UMP:pyrophosphate phosphoribosyltransferase activity","type":"related"},{"name":"UPRTase activity","type":"related"},{"name":"uridine 5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"uridine monophosphate pyrophosphorylase activity","type":"related"},{"name":"uridylate pyrophosphorylase activity","type":"related"},{"name":"uridylic pyrophosphorylase activity","type":"related"}],"termid":"GO:0004845","terms_by_termid":{"GO:0004845":null}}


id: PBO:0001702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof5","termid":"PBO:0001702"}


id: GO:0003260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cardiac progenitor cell to form the heart field. Cardiac progenitor cells are non-terminally differentiated, mesoderm-derived cells that are committed to differentiate into cells of the heart. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart formation","termid":"GO:0060974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardioblast migration","termid":"GO:0003260"}


id: PBO:0054442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1839","termid":"PBO:0054442"}


id: GO:0003369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of a mesendodermal cell.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity involved in gastrulation cell migration","termid":"GO:0003379"},{"relation_name":"part_of","term_name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of cell polarity involved in mesendodermal cell migration","termid":"GO:0003369"}


id: PBO:0076656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBX18 antisense RNA 1","termid":"PBO:0076656"}


id: PBO:0056352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP7 domain containing 1","termid":"PBO:0056352"}


id: GO:0001520
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A supramolecular fiber found in the flagella of mammalian sperm that surrounds the nine microtubule doublets. These dense fibers are stiff and noncontractile. In human, they consist of about 10 major and at least 15 minor proteins, where all major proteins are ODF1, ODF2 or ODF2-related proteins.","definition_xrefs":["GOC:cilia","PMID:21586547","PMID:10381817","PMID:25361759","GOC:krc","ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric cytoskeletal fiber","termid":"GO:0099513"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"outer dense fiber","synonyms":[{"name":"outer dense fibre","type":"exact"}],"termid":"GO:0001520"}


id: GO:0070205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate = (1R,6R)-2-succinyl-6-hydroxycyclohexa-2,4-diene-1-carboxylate + pyruvate.","definition_xrefs":["RHEA:25597","EC:4.2.99.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity","secondary_identifiers":["MetaCyc:RXN-9310","KEGG_REACTION:R08166"],"synonyms":[{"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase activity","type":"related"},{"name":"6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate synthase activity","type":"related"},{"name":"MenH","type":"related"},{"name":"SHCHC synthase activity","type":"related"},{"name":"YfbB","type":"related"}],"termid":"GO:0070205"}


id: PBO:0067803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 105","termid":"PBO:0067803"}


id: FYPO:0005474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate dehydrogenase activity using NAPD+ as a cofactor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal glutamate dehydrogenase (NADP+) activity","synonyms":[{"name":"normal NAD(P)H-dependent glutamate dehydrogenase activity","type":"exact"},{"name":"normal NADP-GDH activity","type":"exact"}],"termid":"FYPO:0005474"}


id: RO:0002163
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A is spatially_disjoint_from B if and only if they have no parts in common","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spatially_disjoint_from","termid":"RO:0002163"}


id: GO:1902486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a growing cell tip.","definition_xrefs":["GOC:TermGenie","PMID:23041194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to growing cell tip","synonyms":[{"name":"protein localisation in growing cell tip","type":"exact"},{"name":"protein localisation to growing cell tip","type":"exact"},{"name":"protein localization in growing cell tip","type":"exact"}],"termid":"GO:1902486"}


id: PBO:0070310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 16","termid":"PBO:0070310"}


id: GO:0033960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-methylxanthosine + H2O = 7-methylxanthine + H+ + ribofuranose.","definition_xrefs":["RHEA:10880","EC:3.2.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"N-methyl nucleosidase activity","secondary_identifiers":["MetaCyc:RXN-7597","KEGG_REACTION:R07918"],"synonyms":[{"name":"7-methylxanthosine nucleosidase activity","type":"related"},{"name":"7-methylxanthosine ribohydrolase activity","type":"related"},{"name":"N-MeNase activity","type":"related"},{"name":"N-methyl nucleoside hydrolase activity","type":"related"},{"name":"methylpurine nucleosidase activity","type":"related"}],"termid":"GO:0033960"}


id: GO:0045586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gamma-delta T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation","termid":"GO:0046643"},{"relation_name":"regulates","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-delta T cell differentiation","synonyms":[{"name":"regulation of gamma-delta T cell development","type":"related"},{"name":"regulation of gamma-delta T lymphocyte differentiation","type":"exact"},{"name":"regulation of gamma-delta T-cell differentiation","type":"exact"},{"name":"regulation of gamma-delta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045586"}


id: GO:0099515
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112278,104232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"The transport of organelles or other particles from one location in the cell to another along actin filaments.","definition_xrefs":["GOC:dos","GOC:mah","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton-dependent intracellular transport","termid":"GO:0030705"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"actin filament-based transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099515","terms_by_termid":{"GO:0030050":null}}


id: GO:2000488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of brassinosteroid biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of brassinosteroid biosynthetic process","termid":"GO:0010422"},{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"positively_regulates","term_name":"brassinosteroid biosynthetic process","termid":"GO:0016132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of brassinosteroid biosynthetic process","synonyms":[{"name":"positive regulation of brassinosteroid anabolism","type":"exact"},{"name":"positive regulation of brassinosteroid biosynthesis","type":"exact"},{"name":"positive regulation of brassinosteroid formation","type":"exact"},{"name":"positive regulation of brassinosteroid synthesis","type":"exact"}],"termid":"GO:2000488"}


id: PBO:0047552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 10","termid":"PBO:0047552"}


id: PBO:0060443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACC family member 2","termid":"PBO:0060443"}


id: PBO:0088280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 6 Pam1","termid":"PBO:0088280"}


id: PR:000035410
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic checkpoint serine/threonine-protein kinase BUB1 phosphorylated 5 in Schizosaccharomyces pombe 972h-. This form represents the basal phosphorylated state observed during interphase and mitosis. UniProtKB:O94751, MOD:00696.","definition_xrefs":["PMID:12606573","PRO:KER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic checkpoint serine/threonine-protein kinase BUB1 phosphorylated 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.12c","synonyms":[{"name":"Spom972h-BUB1/Phos:5","type":"exact"}],"termid":"PR:000035410"}


id: GO:0071448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkyl hydroperoxide stimulus. Alkyl hydroperoxides are monosubstitution products of hydrogen peroxide, HOOH, where the substituent is an alkyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkyl hydroperoxide","termid":"GO:0033195"},{"relation_name":"is_a","term_name":"cellular response to hydroperoxide","termid":"GO:0071447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to alkyl hydroperoxide","termid":"GO:0071448"}


id: PATO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in an entire organism or part of an organism.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organismal quality","termid":"PATO:0001995"}


id: PBO:0075682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequestosome 1 pseudogene 1","termid":"PBO:0075682"}


id: GO:0048391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the intermediate mesoderm. This process pertains to the initial formation of the structure from unspecified parts.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm formation","termid":"GO:0001707"},{"relation_name":"part_of","term_name":"intermediate mesoderm morphogenesis","termid":"GO:0048390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesoderm formation","termid":"GO:0048391"}


id: PBO:0064731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 67","termid":"PBO:0064731"}


id: GO:0007130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"is_a","term_name":"synaptonemal complex organization","termid":"GO:0070193"},{"relation_name":"part_of","term_name":"homologous chromosome pairing at meiosis","termid":"GO:0007129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"synaptonemal complex assembly","synonyms":[{"name":"synaptonemal complex formation","type":"exact"}],"termid":"GO:0007130"}


id: PBO:0073622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 8","termid":"PBO:0073622"}


id: PBO:0002773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit c (proteolipid subunit)","termid":"PBO:0002773"}


id: PBO:0058345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4718","termid":"PBO:0058345"}


id: PBO:0052391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 28, pseudogene","termid":"PBO:0052391"}


id: PBO:0084845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homolog of human Bcl-2 interacting protein BMRP","termid":"PBO:0084845"}


id: GO:0072588
data:
  {"annotated_genes":["SJAG_00083","SJAG_00566","SJAG_01234","SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86127,97259,102364,91454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031429"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains an RNA of the box H/ACA type and the four core proteins dyskerin, NOP10, NHP2, and GAR1 (human protein nomenclature). RNA pseudouridylation (isomerization of uridine to pseudouridine) is the major, and most likely the ancestral, function of H/ACA RNPs. Pseudouridylation targets include both large and small ribosomal RNAs (rRNAs), and small nuclear RNA (U2 snRNA). In addition to these catalytic H/ACA RNPs, a less abundant but more diverse class of structural H/ACA RNPs exists, which does not have pseudouridylation activity. These include the vertebrate telomerase RNP complex.","definition_xrefs":["GOC:krc","GOC:BHF","GOC:jbu","GOC:BHF_telomerase","GOC:mah","GOC:vw","PMID:20227365","PMID:25590339","PMID:17284456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA-containing ribonucleoprotein complex","termid":"GO:0005732"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"box H/ACA RNP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box H/ACA snoRNP pseudouridylase complex","type":"related"},{"name":"sRNP complex","type":"narrow"}],"termid":"GO:0072588","terms_by_termid":{"GO:0031429":null}}


id: PBO:0089914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2B-K119 ubiquitin ligase complex (HULC) subunit, ubiquitin-protein ligase E3 Brl1","termid":"PBO:0089914"}


id: PBO:0081907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 865","termid":"PBO:0081907"}


id: PBO:0077898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrapeptide repeat homeobox like (pseudogene)","termid":"PBO:0077898"}


id: PBO:0073142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog C, vesicle trafficking protein","termid":"PBO:0073142"}


id: MOD:00003
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Entry from Unimod.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized protein modification","termid":"MOD:00032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Unimod","termid":"MOD:00003"}


id: PBO:0030309
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleus_localization","termid":"PBO:0030309"}


id: PATO:0001593
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased curvature","termid":"PATO:0001593"}


id: PBO:0087434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit d of the V0 integral membrane domain of V-ATPase; part of the electrogenic proton pump found in the endomembrane system; required for V1 domain assembly on the vacuolar membrane; the V0 integral membrane domain of vacuolar H+-ATPase (V-ATPase) has five subunits","termid":"PBO:0087434"}


id: GO:0099534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The directed change of presynaptic cytosolic free calcium ion concentration in the cytosol via the reversible binding of calcium ions to calcium-binding proteins in the cytosol thereby modulating the spatial and temporal dynamics of changes in presynaptic cytosolic calcium concentrations.","definition_xrefs":["PMID:24442513","PMID:26190970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion binding involved in regulation of cytosolic calcium ion concentration","termid":"GO:0099510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0046872","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"calcium ion binding involved in regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium ion binding involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"presynaptic calcium ion buffering","type":"exact"},{"name":"regulation of presynaptic cytosolic calcium ion concentration by calcium ion buffering","type":"exact"}],"termid":"GO:0099534"}


id: _global:directly_positively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p directly positively regulates q iff p is immediately causally upstream of q, and p positively regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulates","termid":"_global:directly_regulates"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"positively_regulates","termid":"_global:positively_regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_positively_regulates","secondary_identifiers":["RO:0002629"],"termid":"_global:directly_positively_regulates"}


id: GO:0110003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving tRNA C5-cytosine methylation.","definition_xrefs":["GOC:vw","PMID:23074192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tRNA methylation","termid":"GO:0110002"},{"relation_name":"regulates","term_name":"tRNA C5-cytosine methylation","termid":"GO:0002946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"regulation of tRNA C5-cytosine methylation","termid":"GO:0110003"}


id: FYPO:0007320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal stress granule assembly during vegetative growth","termid":"FYPO:0002347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased stress granule assembly during vegetative growth","synonyms":[{"name":"increased cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"increased stress granule assembly during mitotic cell cycle","type":"related"},{"name":"increased stress granule formation during vegetative growth","type":"exact"}],"termid":"FYPO:0007320"}


id: PBO:0034690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_vacuole","termid":"PBO:0034690"}


id: GO:0032272
data:
  {"annotated_genes":["SJAG_01894","SJAG_02700","SJAG_00279","SJAG_04982","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94996,110410,84392,88420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[110413,93834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the process of creating protein polymers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"negatively_regulates","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of protein polymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein polymerization","type":"exact"},{"name":"down-regulation of protein polymerization","type":"exact"},{"name":"downregulation of protein polymerization","type":"exact"},{"name":"inhibition of protein polymerization","type":"narrow"}],"termid":"GO:0032272","terms_by_termid":{"GO:0042989":null,"GO:0051016":null}}


id: GO:0000153
data:
  {"annotated_genes":["SJAG_04384","SJAG_03841","SJAG_01051","SJAG_05274","SJAG_03345","SJAG_01134","SJAG_01709"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100066,101375,103768,100898,105657,113231,85373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000836"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex found in the cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01051":null,"SJAG_01134":null,"SJAG_01709":null,"SJAG_03345":null,"SJAG_03841":null,"SJAG_04384":null,"SJAG_05274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000153","terms_by_termid":{"GO:0000836":null}}


id: PBO:0066868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 168","termid":"PBO:0066868"}


id: GO:1901733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of quercetin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid catabolic process","termid":"GO:0046275"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"},{"relation_name":"is_a","term_name":"quercetin metabolic process","termid":"GO:1901732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin catabolic process","synonyms":[{"name":"quercetin breakdown","type":"exact"},{"name":"quercetin catabolism","type":"exact"},{"name":"quercetin degradation","type":"exact"}],"termid":"GO:1901733"}


id: PBO:0054277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1667","termid":"PBO:0054277"}


id: FYPO:0008127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype where a ribosome is mislocalized to the nucleoplasm in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"ribosome mislocalized to nucleoplasm","termid":"FYPO:0008127"}


id: PBO:0079152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 12","termid":"PBO:0079152"}


id: PBO:0074695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70E","termid":"PBO:0074695"}


id: PBO:0064559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POMP pseudogene 1","termid":"PBO:0064559"}


id: PBO:0057394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-2","termid":"PBO:0057394"}


id: GO:0031088
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the platelet dense granule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"platelet dense granule","termid":"GO:0042827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"platelet dense granule membrane","termid":"GO:0031088"}


id: PBO:0082513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the Hat1p-Hat2p histone acetyltransferase complex; uses the cofactor acetyl coenzyme A to acetylate free nuclear and cytoplasmic histone H4; involved in telomeric silencing and DNA double-strand break repair","termid":"PBO:0082513"}


id: PBO:0065450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase, 6 pseudogene 1","termid":"PBO:0065450"}


id: PBO:0082760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SF3b subcomplex of the U2 snRNP; increases efficiency of first and second step pre-mRNA splicing; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern; facilitates passage through G1/S Start, but is not required for G2/M transition or exit from mitosis","termid":"PBO:0082760"}


id: GO:0043947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of symbiont enzyme activity. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont catalytic activity (obsolete GO:0043947)","synonyms":[{"name":"activation by host of symbiont enzyme activity","type":"narrow"},{"name":"activation of symbiont enzyme activity","type":"narrow"},{"name":"positive regulation by host of symbiont enzyme activity","type":"exact"},{"name":"up regulation by host of symbiont enzyme activity","type":"exact"},{"name":"up-regulation by host of symbiont enzyme activity","type":"exact"},{"name":"upregulation by host of symbiont enzyme activity","type":"exact"}],"termid":"GO:0043947"}


id: PBO:0113520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase; role in proteasome-dependent degradation of aberrant nuclear proteins; targets substrates with regions of exposed hydrophobicity; contains intrinsically disordered regions involved in substrate recognition; prefers a window of exposed hydrophobicity that causes a particular level of protein insolubility, suggesting that San1p evolved to target highly aggregation-prone proteins; localizes to the cytoplasm, nucleus and peroxisomes","termid":"PBO:0113520"}


id: PBO:0064504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II, I and III subunit E","termid":"PBO:0064504"}


id: PBO:0072838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30BP antisense RNA 1","termid":"PBO:0072838"}


id: PBO:0000352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain","termid":"PBO:0000352"}


id: GO:0019337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tetrachloroethylene, a derivative of ethene with the hydrogen atoms replaced by chlorines.","definition_xrefs":["GOC:ai","PMID:7988892","PMID:8663199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon catabolic process","termid":"GO:0042205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"tetrachloroethylene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:tce2","MetaCyc:PCEDEG-PWY"],"synonyms":[{"name":"tetrachloroethene catabolic process","type":"exact"},{"name":"tetrachloroethene catabolism","type":"exact"},{"name":"tetrachloroethylene breakdown","type":"exact"},{"name":"tetrachloroethylene catabolism","type":"exact"},{"name":"tetrachloroethylene degradation","type":"exact"}],"termid":"GO:0019337"}


id: GO:1900484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein targeting to vacuolar membrane.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein targeting to membrane","termid":"GO:0090315"},{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuolar membrane","termid":"GO:1900483"},{"relation_name":"is_a","term_name":"negative regulation of vacuolar transport","termid":"GO:1903336"},{"relation_name":"negatively_regulates","term_name":"protein targeting to vacuolar membrane","termid":"GO:0044395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006605","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of protein targeting to vacuolar membrane","synonyms":[{"name":"down regulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"down-regulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"downregulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"inhibition of protein targeting to vacuolar membrane","type":"narrow"}],"termid":"GO:1900484"}


id: PBO:0048194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABPB1 antisense RNA 1","termid":"PBO:0048194"}


id: PR:Q9C1X2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A D-2-hydroxyglutarate dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11748:SF7","OMA:SCHPO02620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-lactate dehydrogenase C713.03, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.03","secondary_identifiers":["UniProtKB:Q9C1X2"],"synonyms":[{"name":"Spom972h-D2HGDH","type":"exact"}],"termid":"PR:Q9C1X2"}


id: GO:1902042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.","definition_xrefs":["GOC:TermGenie","PMID:17245429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902041"},{"relation_name":"is_a","term_name":"negative regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001237"},{"relation_name":"negatively_regulates","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of extrinsic apoptotic signaling pathway via death domain receptors","synonyms":[{"name":"down regulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"down regulation of extrinsic apoptotic signaling pathway via death domain receptors","type":"exact"},{"name":"down-regulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"down-regulation of extrinsic apoptotic signaling pathway via death domain receptors","type":"exact"},{"name":"downregulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"downregulation of extrinsic apoptotic signaling pathway via death domain receptors","type":"exact"},{"name":"inhibition of death receptor-mediated apoptosis","type":"narrow"},{"name":"inhibition of extrinsic apoptotic signaling pathway via death domain receptors","type":"narrow"},{"name":"negative regulation of death receptor-mediated apoptosis","type":"narrow"}],"termid":"GO:1902042"}


id: PBO:0060120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 21","termid":"PBO:0060120"}


id: GO:0018416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of nickel into a 3Fe-2S complex by tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide.","definition_xrefs":["RESID:AA0292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"nickel incorporation into metallo-sulfur cluster","termid":"GO:0018414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"nickel incorporation into iron-sulfur cluster via tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide","synonyms":[{"name":"nickel incorporation into iron-sulphur cluster via tris-L-cysteinyl L-cysteine persulphido bis-L-glutamato L-histidino nickel triiron disulphide trioxide","type":"exact"}],"termid":"GO:0018416"}


id: PBO:0035826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_actin_filament-based_movement","termid":"PBO:0035826"}


id: GO:0062156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the ATP-dependent diffusion of a potassium ion across the mitochondrial inner membrane.","definition_xrefs":["PMID:31435016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"ATP-gated ion channel activity","termid":"GO:0035381"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"mitochondrial ATP-gated potassium channel activity","synonyms":[{"name":"mitoK-ATP activity","type":"exact"},{"name":"mitochondrial potassium channel activity","type":"exact"}],"termid":"GO:0062156"}


id: PBO:0063462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor D","termid":"PBO:0063462"}


id: MOD:01444
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-3,3-dihydroxyoalanine.","definition_xrefs":["RESID:AA0492#CYS","PubMed:11435113","PubMed:17558559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"L-3,3-dihydroxyoalanine","termid":"MOD:01448"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3,3-dihydroxyoalanine (Cys)","synonyms":[{"name":"(S)-2-amino-3,3-dihydroxypropanoic acid","type":"exact"},{"name":"2-(dihydroxymethyl)glycine","type":"exact"},{"name":"3,3-dihydroxy-L-alanine","type":"exact"},{"name":"3,3-dihydroxyalanine","type":"exact"},{"name":"3-hydroxy-L-serine","type":"exact"},{"name":"3-oxoalanine hydrate","type":"exact"},{"name":"C(alpha)-formylglycine hydrate","type":"related"}],"termid":"MOD:01444"}


id: PBO:0063136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvin alpha","termid":"PBO:0063136"}


id: MOD:00437
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a farnesyl group.","definition_xrefs":["DeltaMass:0","Unimod:44","PubMed:15609361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesylated residue","synonyms":[{"name":"FarnRes","type":"exact"},{"name":"Farnesyl","type":"related"},{"name":"Farnesylation","type":"exact"}],"termid":"MOD:00437"}


id: GO:0010054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a trichoblast, a root epidermal cell that will give rise to a root hair.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root epidermal cell differentiation","termid":"GO:0010053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichoblast differentiation","synonyms":[{"name":"trichoblast cell differentiation","type":"exact"}],"termid":"GO:0010054"}


id: PBO:0001420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt3","termid":"PBO:0001420"}


id: GO:0009725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endogenous stimulus","termid":"GO:0009719"},{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hormone","synonyms":[{"name":"growth regulator","type":"related"},{"name":"response to hormone stimulus","type":"exact"}],"termid":"GO:0009725"}


id: GO:0008946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage of oligonucleotides to yield nucleoside 5'-phosphates.","definition_xrefs":["EC:3.1.13.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activity","termid":"GO:0004518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"oligonucleotidase activity","secondary_identifiers":["MetaCyc:3.1.13.3-RXN"],"termid":"GO:0008946"}


id: GO:0005859
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A filament of myosin found in a muscle cell of any type.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin II complex","termid":"GO:0016460"},{"relation_name":"part_of","term_name":"contractile muscle fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"muscle myosin complex","termid":"GO:0005859"}


id: PBO:0092006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Serine (gcu), mitochondrial","termid":"PBO:0092006"}


id: PBO:0016909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug115","termid":"PBO:0016909"}


id: GO:0102653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A51 + 2-oxoglutarate + O2 = H+ + gibberellin A51-catabolite + succinate + carbon dioxide + H2O.","definition_xrefs":["GOC:pz","EC:1.14.11.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gibberellin A51,2-oxoglutarate:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-172"],"termid":"GO:0102653"}


id: PR:Q9USW0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21B10.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USW0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21B10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.02","synonyms":[{"name":"Spom972h-SPBC21B10.02","type":"exact"}],"termid":"PR:Q9USW0"}


id: GO:0039508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host receptor.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host receptor activity (obsolete GO:0039508)","synonyms":[{"name":"down-regulation by virus of host receptor activity","type":"exact"},{"name":"downregulation by virus of host receptor activity","type":"exact"},{"name":"inhibition by virus of host receptor activity","type":"narrow"},{"name":"negative regulation by virus of host receptor activity","type":"exact"},{"name":"suppression by virus of host receptor function","type":"exact"},{"name":"viral inhibition of host receptor","type":"exact"}],"termid":"GO:0039508"}


id: PBO:0041796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPZB pseudogene 1","termid":"PBO:0041796"}


id: PBO:0056944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR9-3 host gene","termid":"PBO:0056944"}


id: PBO:0066360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCSD domain containing 1","termid":"PBO:0066360"}


id: PBO:0067232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 303, pseudogene","termid":"PBO:0067232"}


id: PBO:0035994
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_movement_within_plasma_membrane_during_vegetative_growth","termid":"PBO:0035994"}


id: GO:0061326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the renal tubule over time from its formation to the mature form. A renal tubule is a tube that filters, re-absorbs and secretes substances to rid an organism of waste and to play a role in fluid homeostasis.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal tubule development","termid":"GO:0061326"}


id: PBO:0083359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene RPL13B/YMR142C","termid":"PBO:0083359"}


id: PBO:0001615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid synthase alpha subunit Lsd1","termid":"PBO:0001615"}


id: PBO:0055411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2841","termid":"PBO:0055411"}


id: PBO:0089988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine dehydrogenase Hom6","termid":"PBO:0089988"}


id: PBO:0003748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA guanylyltransferase Ceg1","termid":"PBO:0003748"}


id: GO:0090137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an epithelial cell to another epithelial cell via adhesion molecules that contributes to epithelium migration.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell-cell adhesion","termid":"GO:0090136"},{"relation_name":"part_of","term_name":"epithelium migration","termid":"GO:0090132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:0090137"}


id: PBO:0012535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_acquisition_of_features_of","termid":"PBO:0012535"}


id: GO:0001179
data:
  {"annotated_genes":["SJAG_00202"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78736],"is_not":false,"summary":null,"term":"GO:0001179"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase I transcription factor, a protein required to initiate or regulate transcription by RNA polymerase I.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor binding","termid":"GO:0140296"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00202":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"RNA polymerase I transcription factor binding","type":"broad"}],"termid":"GO:0001179","terms_by_termid":{"GO:0001179":null}}


id: PBO:0084654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor orotate phosphoribosyltransferase (OPRTase) isozyme; catalyzes the fifth enzymatic step in the de novo biosynthesis of pyrimidines, converting orotate into orotidine-5'-phosphate; URA10 has a paralog, URA5, that arose from the whole genome duplication","termid":"PBO:0084654"}


id: GO:0048006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses lipid antigen of endogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family.","definition_xrefs":["PMID:15928680","GOC:add","PMID:10375559","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous antigen","termid":"GO:0019883"},{"relation_name":"is_a","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation, endogenous lipid antigen via MHC class Ib","synonyms":[{"name":"antigen presentation, endogenous lipid antigen","type":"exact"},{"name":"endogenous lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0048006"}


id: PBO:0090931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF2alpha (Gcn2) kinase inhibitor (human IMPACT homolog) Yih1","termid":"PBO:0090931"}


id: GO:0052642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lysophosphatidic acid + H2O = phosphate + monoacylglycerol.","definition_xrefs":["PMID:7966317","PMID:20045079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"lysophosphatidic acid phosphatase activity","secondary_identifiers":["Reactome:R-HSA-8878654","EC:3.1.3.106","MetaCyc:RXNQT-4375","RHEA:33155"],"synonyms":[{"name":"1-acyl-sn-glycerol 3-phosphatase activity","type":"exact"},{"name":"2-lysophosphatidate phosphatase activity","type":"exact"},{"name":"LPA phosphatase activity","type":"exact"},{"name":"lysophosphatidate phosphatase activity","type":"exact"}],"termid":"GO:0052642"}


id: GO:0048102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death that is accompanied by the formation of autophagosomes. Autophagic cell death is characterized by lack of chromatin condensation and massive vacuolization of the cytoplasm, with little or no uptake by phagocytic cells.","definition_xrefs":["PMID:18846107","PMID:23347517","GOC:mah","GOC:autophagy","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autophagic cell death","synonyms":[{"name":"autophagic death","type":"broad"},{"name":"autosis","type":"related"},{"name":"programmed cell death by autophagy","type":"broad"},{"name":"programmed cell death by macroautophagy","type":"exact"},{"name":"type II programmed cell death","type":"related"}],"termid":"GO:0048102"}


id: PBO:0053985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1301","termid":"PBO:0053985"}


id: GO:0141082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts the host reactive oxygen species (ROS)-mediated innate immune response by directly degrading host ROS. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:19684141","PMID:27825304","PMID:28288207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont defense to host-produced reactive oxygen species","termid":"GO:0052164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated detoxification of host-generated reactive oxygen species","termid":"GO:0141082"}


id: GO:0031720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a haptoglobin, any alpha2 globulin of blood plasma that can combine with free oxyhemoglobin to form a stable complex.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"haptoglobin binding","termid":"GO:0031720"}


id: PBO:0063791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 20","termid":"PBO:0063791"}


id: GO:2001298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N(omega),N(omega)-dimethyl-L-arginine, a methyl-L-arginine having two methyl groups both attached to the primary amino moiety of the guanidino group.","definition_xrefs":["GOC:rs","PMID:10510241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"N(omega),N(omega)-dimethyl-L-arginine metabolic process","synonyms":[{"name":"N(omega),N(omega)-dimethyl-L-arginine metabolism","type":"exact"}],"termid":"GO:2001298"}


id: PBO:0040981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 like 1","termid":"PBO:0040981"}


id: GO:0003411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another and contributes to the physical shaping or formation of the camera-type eye.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility involved in camera-type eye morphogenesis","termid":"GO:0003411"}


id: GO:0010095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a floral organ primordium acquires petal identity. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of floral organ identity","termid":"GO:0010093"},{"relation_name":"part_of","term_name":"petal formation","termid":"GO:0048451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of petal identity","termid":"GO:0010095"}


id: GO:0001893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maternally driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin.","definition_xrefs":["GOC:add","ISBN:068340007X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"is_a","term_name":"maternal process involved in female pregnancy","termid":"GO:0060135"},{"relation_name":"part_of","term_name":"placenta development","termid":"GO:0001890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal placenta development","synonyms":[{"name":"decidua development","type":"related"}],"termid":"GO:0001893"}


id: PBO:0074462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 4 pseudogene 2","termid":"PBO:0074462"}


id: GO:0160114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structure which joins the B1 protofilament of the B tubule to the A10 and A11 protofilaments of the A tubule within an axonemal microtubule doublet.","definition_xrefs":["GOC:krc","PMID:29430673","PMID:37295417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal microtubule doublet outer junction","termid":"GO:0160114"}


id: PBO:0063649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 6","termid":"PBO:0063649"}


id: PBO:0087077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L38; homologous to mammalian ribosomal protein L38, no bacterial homolog","termid":"PBO:0087077"}


id: MOD:01237
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-cysteine residue with 4-hydroxynonenal.","definition_xrefs":["PubMed:9629898","PubMed:11327326","PubMed:15133838","Unimod:53#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxynonenal adduct","termid":"MOD:00446"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine 4-hydroxynonenal adduct","synonyms":[{"name":"4-hydroxynonenal (HNE)","type":"related"},{"name":"HNE","type":"related"}],"termid":"MOD:01237"}


id: PBO:0036227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_methylation_at_telomere_during_vegetative_growth","termid":"PBO:0036227"}


id: PBO:0028929
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endoplasmic_reticulum_localization","termid":"PBO:0028929"}


id: GO:0046851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of bone remodeling.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of bone remodeling","termid":"GO:0046850"},{"relation_name":"negatively_regulates","term_name":"bone remodeling","termid":"GO:0046849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone remodeling","synonyms":[{"name":"down regulation of bone remodeling","type":"exact"},{"name":"down-regulation of bone remodeling","type":"exact"},{"name":"downregulation of bone remodeling","type":"exact"},{"name":"inhibition of bone remodeling","type":"narrow"},{"name":"negative regulation of bone remodelling","type":"exact"}],"termid":"GO:0046851"}


id: GO:0008243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the specific cleavage of an Arg-Val bond in plasminogen to form plasmin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete plasminogen activator activity (obsolete GO:0008243)","synonyms":[{"name":"abbokinase activity","type":"related"},{"name":"cellular plasminogen activator activity","type":"narrow"},{"name":"double-chain urokinase-type plasminogen activator","type":"related"},{"name":"plasminogen activator activity","type":"exact"},{"name":"plasminogen activator, tissue-type","type":"related"},{"name":"t-PA","type":"related"},{"name":"t-plasminogen activator activity","type":"narrow"},{"name":"tPA activity","type":"narrow"},{"name":"tissue plasminogen activator activity","type":"narrow"},{"name":"tissue-type plasminogen activator activity","type":"related"},{"name":"two-chain urokinase-type plasminogen activator","type":"related"},{"name":"u-PA","type":"related"},{"name":"u-plasminogen activator activity","type":"narrow"},{"name":"uPA","type":"related"},{"name":"urinary esterase A","type":"related"},{"name":"urinary plasminogen activator activity","type":"narrow"},{"name":"urokinase activity","type":"related"},{"name":"urokinase plasminogen activator","type":"related"},{"name":"urokinase-type plasminogen activator","type":"related"}],"termid":"GO:0008243"}


id: GO:0038169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by somatostatin binding to the somatostatin receptor (SSTR) on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:8769369","GOC:jc","PMID:18006219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"somatostatin receptor signaling pathway","synonyms":[{"name":"SST receptor signaling pathway","type":"exact"},{"name":"SSTR signaling pathway","type":"related"}],"termid":"GO:0038169"}


id: GO:1904802
data:
  {"annotated_genes":["SJAG_00087"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110396],"is_not":false,"summary":null,"term":"GO:1904802"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a RITS complex.","definition_xrefs":["GO_REF:0000079","PMID:26443059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00087":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"RITS complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RITS complex formation","type":"exact"}],"termid":"GO:1904802","terms_by_termid":{"GO:1904802":null}}


id: PBO:0074131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 32 member 1","termid":"PBO:0074131"}


id: GO:0045654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of megakaryocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"regulation of megakaryocyte differentiation","termid":"GO:0045652"},{"relation_name":"positively_regulates","term_name":"megakaryocyte differentiation","termid":"GO:0030219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of megakaryocyte differentiation","synonyms":[{"name":"activation of megakaryocyte differentiation","type":"narrow"},{"name":"stimulation of megakaryocyte differentiation","type":"narrow"},{"name":"up regulation of megakaryocyte differentiation","type":"exact"},{"name":"up-regulation of megakaryocyte differentiation","type":"exact"},{"name":"upregulation of megakaryocyte differentiation","type":"exact"}],"termid":"GO:0045654"}


id: PBO:0074983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-25","termid":"PBO:0074983"}


id: PBO:0051889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITFG2 antisense RNA 1","termid":"PBO:0051889"}


id: PBO:0071297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 20","termid":"PBO:0071297"}


id: PBO:0062036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 5","termid":"PBO:0062036"}


id: GO:0043002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transport of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Golgi to plasma membrane CFTR protein transport (obsolete GO:0043002)","synonyms":[{"name":"down regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"down-regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"downregulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"inhibition of Golgi to plasma membrane CFTR protein transport","type":"narrow"}],"termid":"GO:0043002"}


id: GO:0160022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a substance by a cell or a tissue by discharging a portion of the secreting cell when intracellular components are freed into a lumen through the shedding of whole pieces of the cytoplasm.","definition_xrefs":["PMID:25960390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"apocrine secretion","synonyms":[{"name":"secretion by cell decapitation","type":"related"},{"name":"secretion by membrane budding","type":"related"}],"termid":"GO:0160022"}


id: PBO:0069482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 749, pseudogene","termid":"PBO:0069482"}


id: FYPO:0001022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to high osmolarity.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth during cellular response to osmotic stress","termid":"FYPO:0001021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth during cellular response to high osmolarity","synonyms":[{"name":"normal cell population growth during cellular response to high osmolarity","type":"exact"},{"name":"normal cell population growth during cellular response to hyperosmotic conditions","type":"exact"},{"name":"normal cellular response to high osmolarity","type":"related"},{"name":"normal vegetative cell population growth during cellular response to high osmolarity","type":"exact"}],"termid":"FYPO:0001022"}


id: PR:Q9UU79
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein NSA2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05060","PANTHER:PTHR12642:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein nsa2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.08","secondary_identifiers":["UniProtKB:Q9UU79"],"synonyms":[{"name":"Spom972h-NSA2","type":"exact"}],"termid":"PR:Q9UU79"}


id: PBO:0059095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 1","termid":"PBO:0059095"}


id: FYPO:0006625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in the plasma membrane is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatidylinositol phosphate level in plasma membrane","termid":"FYPO:0006222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased phosphatidylinositol-4,5-bisphosphate level in plasma membrane","synonyms":[{"name":"decreased 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate level in plasma membrane","type":"exact"},{"name":"decreased phosphatidylinositol-4,5-bisphosphate level in cell membrane","type":"exact"},{"name":"decreased phosphatidylinositol-4,5-bisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"decreased phosphatidylinositol-4,5-bisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"decreased plasma membrane PI(4,5)P2 level","type":"exact"},{"name":"decreased plasma membrane phosphatidylinositol-4,5-bisphosphate level","type":"exact"},{"name":"reduced phosphatidylinositol-4,5-bisphosphate level in plasma membrane","type":"exact"}],"termid":"FYPO:0006625"}


id: PBO:0042121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 194","termid":"PBO:0042121"}


id: PR:O42937
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coatomer subunit beta' that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04096","PANTHER:PTHR19876:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit beta' (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.13c","secondary_identifiers":["UniProtKB:O42937"],"synonyms":[{"name":"Spom972h-COPB2","type":"exact"},{"name":"beta'-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"beta'-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42937"}


id: GO:0007438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the oenocyte over time, from its formation to the mature structure. The oenocytes are large secretory cells found in clusters underlying the epidermis of larval abdominal segments.","definition_xrefs":["GOC:bf","PMID:11171397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"oenocyte differentiation","termid":"GO:0001742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oenocyte development","termid":"GO:0007438"}


id: PATO:0000481
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000481 negative regulation (obsolete PATO:0000481)","termid":"PATO:0000481"}


id: GO:0032786
data:
  {"annotated_genes":["SJAG_02551","SJAG_02057","SJAG_01151","SJAG_03118","SJAG_03061","SJAG_00150","SJAG_03967","SJAG_01149","SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104965,107005],"is_not":false,"summary":null,"term":"GO:0032786"},{"annotations":[99155,111382,91912,113080,105127,102123,101447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides catalyzed by a DNA-dependent RNA polymerase.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription elongation","termid":"GO:0032784"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"positively_regulates","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01213":null,"SJAG_02057":null,"SJAG_02551":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of DNA-templated transcription, elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of RNA elongation","type":"broad"},{"name":"positive regulation of DNA-dependent transcription, elongation","type":"exact"},{"name":"positive regulation of transcription elongation","type":"broad"},{"name":"positive regulation of transcription elongation, DNA-dependent","type":"exact"},{"name":"positive regulation of transcriptional elongation","type":"broad"},{"name":"positive transcription elongation regulator activity","type":"related"},{"name":"stimulation of RNA elongation","type":"broad"},{"name":"up regulation of RNA elongation","type":"broad"},{"name":"up-regulation of RNA elongation","type":"broad"},{"name":"upregulation of RNA elongation","type":"broad"}],"termid":"GO:0032786","terms_by_termid":{"GO:0032786":null,"GO:0032968":null}}


id: PR:P52890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atf1 gene.","definition_xrefs":["UniProtKB:P52890","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor atf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29B5.01","synonyms":[{"name":"Spom972h-atf1","type":"exact"},{"name":"protein sss1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor mts1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P52890"}


id: PBO:0062193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily R member 2 pseudogene","termid":"PBO:0062193"}


id: GO:0060657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of mammary gland cord elongation as a result of a signal being created by a mesenchymal cell that is a precursor to the mammary fat and its subsequent reception and interpretation by an mammary cord epithelial cell.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"mammary gland cord elongation","termid":"GO:0060654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of mammary gland cord elongation by mammary fat precursor cell-epithelial cell signaling","synonyms":[{"name":"regulation of mammary gland cord elongation by mammary fat precursor cell-epithelial cell signalling","type":"exact"}],"termid":"GO:0060657"}


id: PBO:0081680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 601, pseudogene","termid":"PBO:0081680"}


id: PBO:0038615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin I converting enzyme","termid":"PBO:0038615"}


id: GO:0031064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the removal of acetyl groups from histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deacetylation (obsolete GO:0031064)","synonyms":[{"name":"down regulation of histone deacetylation","type":"exact"},{"name":"down-regulation of histone deacetylation","type":"exact"},{"name":"downregulation of histone deacetylation","type":"exact"},{"name":"inhibition of histone deacetylation","type":"narrow"}],"termid":"GO:0031064"}


id: PBO:0085540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9B has a paralog, RPS9A, that arose from the whole genome duplication","termid":"PBO:0085540"}


id: GO:0106084
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of interacting with the spindle pole body and the nuclear envelope, in order to embed the spindle pole body in the nuclear envelope at fusion sites of the inner and outer nuclear membrane.","definition_xrefs":["GOC:lnp","PMID:28356353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane microtubule tethering complex","termid":"GO:0106094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitotic nuclear membrane microtubule tethering complex","synonyms":[{"name":"Mps2-Bbp1-Spc29 complex","type":"related"},{"name":"nuclear membrane mitotic spindle pole body tethering complex","type":"exact"}],"termid":"GO:0106084"}


id: PBO:0091744
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously assigned incorrectly as can1","termid":"PBO:0091744"}


id: GO:0062164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of pseudohyphal septin ring assembly.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of cytoskeleton organization","termid":"GO:0051493"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"pseudohyphal septin ring assembly","termid":"GO:0062163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of pseudohyphal septin ring assembly","termid":"GO:0062164"}


id: PBO:0004867
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.16.6","termid":"PBO:0004867"}


id: PBO:0059770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 44","termid":"PBO:0059770"}


id: GO:0004374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + carbon dioxide (CO2), followed by S-aminomethyldihydrolipoylprotein + (6S)-tetrahydrofolate = dihydrolipoylprotein + (6R)-5,10-methylenetetrahydrofolate + ammonia. Made up of two components, aminomethyltransferase and glycine dehydrogenase (decarboxylating).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glycine cleavage system (obsolete GO:0004374)","synonyms":[{"name":"glycine cleavage system","type":"exact"},{"name":"glycine synthase","type":"broad"}],"termid":"GO:0004374"}


id: GO:0047463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminohexano-6-lactam = D-2-aminohexano-6-lactam.","definition_xrefs":["EC:5.1.1.15","RHEA:14813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on amino acids and derivatives","termid":"GO:0016855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"2-aminohexano-6-lactam racemase activity","secondary_identifiers":["KEGG_REACTION:R04736","MetaCyc:5.1.1.15-RXN"],"synonyms":[{"name":"2-amino-hexano-6-lactam racemase activity","type":"related"},{"name":"alpha-amino-epsilon-caprolactam racemase activity","type":"related"}],"termid":"GO:0047463"}


id: PBO:0050847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"islet cell autoantigen 1 like","termid":"PBO:0050847"}


id: PBO:0003290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine family transporter (predicted)","termid":"PBO:0003290"}


id: GO:0033561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the rate or extent of water loss from an organism via the skin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of water loss via skin (obsolete GO:0033561)","synonyms":[{"name":"skin barrier function","type":"related"}],"termid":"GO:0033561"}


id: RO:0002492
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence ends during y if and only if the time point at which x ends is before or equivalent to the time point at which y ends and after or equivalent to the point at which y starts. Formally: x existence ends during y iff ω(x) <= ω(y) and ω(x) >= α(y).","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_overlaps","termid":"RO:0002490"},{"relation_name":"is_a","term_name":"existence_ends_during_or_before","termid":"RO:0002497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_during","termid":"RO:0002492"}


id: GO:0061103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a glomus cell of the carotid body. The carotid body is a specialized chemosensory organ that helps respond to hypoxia.","definition_xrefs":["PMID:6243386","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carotid body glomus cell differentiation","termid":"GO:0061103"}


id: PR:Q9UTI7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymidylate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11549:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.04","secondary_identifiers":["UniProtKB:Q9UTI7"],"synonyms":[{"name":"Spom972h-TYMS","type":"exact"},{"name":"TS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TSase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI7"}


id: PBO:0056394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE1 pseudogene 1","termid":"PBO:0056394"}


id: PBO:0046805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor VIII associated 3","termid":"PBO:0046805"}


id: GO:1900709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tensidol A biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of tensidol A biosynthetic process","termid":"GO:1900707"},{"relation_name":"positively_regulates","term_name":"tensidol A biosynthetic process","termid":"GO:1900605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of tensidol A biosynthetic process","synonyms":[{"name":"activation of tensidol A anabolism","type":"exact"},{"name":"activation of tensidol A biosynthesis","type":"exact"},{"name":"activation of tensidol A biosynthetic process","type":"narrow"},{"name":"activation of tensidol A formation","type":"exact"},{"name":"activation of tensidol A synthesis","type":"exact"},{"name":"positive regulation of tensidol A anabolism","type":"exact"},{"name":"positive regulation of tensidol A biosynthesis","type":"exact"},{"name":"positive regulation of tensidol A formation","type":"exact"},{"name":"positive regulation of tensidol A synthesis","type":"exact"},{"name":"up regulation of tensidol A anabolism","type":"exact"},{"name":"up regulation of tensidol A biosynthesis","type":"exact"},{"name":"up regulation of tensidol A biosynthetic process","type":"exact"},{"name":"up regulation of tensidol A formation","type":"exact"},{"name":"up regulation of tensidol A synthesis","type":"exact"},{"name":"up-regulation of tensidol A anabolism","type":"exact"},{"name":"up-regulation of tensidol A biosynthesis","type":"exact"},{"name":"up-regulation of tensidol A biosynthetic process","type":"exact"},{"name":"up-regulation of tensidol A formation","type":"exact"},{"name":"up-regulation of tensidol A synthesis","type":"exact"},{"name":"upregulation of tensidol A anabolism","type":"exact"},{"name":"upregulation of tensidol A biosynthesis","type":"exact"},{"name":"upregulation of tensidol A biosynthetic process","type":"exact"},{"name":"upregulation of tensidol A formation","type":"exact"},{"name":"upregulation of tensidol A synthesis","type":"exact"}],"termid":"GO:1900709"}


id: PBO:0089342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane V-ATPase assembly factor Vma21","termid":"PBO:0089342"}


id: PBO:0001622
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.6.1","termid":"PBO:0001622"}


id: PR:O13918
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc homeostasis factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.14","secondary_identifiers":["UniProtKB:O13918"],"synonyms":[{"name":"Spom972h-SLC30A1","type":"exact"}],"termid":"PR:O13918"}


id: GO:0120120
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoskeletal structure in some kinetoplastid species linking the structures of the ciliary pocket collar and the flagellum attachment zone (aka cilium attachment zone).","definition_xrefs":["PMID:22327007","PMID:22445359","PMID:26540076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bilobe structure","synonyms":[{"name":"kinetoplastid flagellar hook complex","type":"exact"}],"termid":"GO:0120120"}


id: PATO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's receiving or being subjected to an action without responding or initiating an action in return.","definition_xrefs":["www.answers.com:www.answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"passive","termid":"PATO:0000764"}


id: PBO:0040688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast carcinoma amplified sequence 4","termid":"PBO:0040688"}


id: PBO:0043816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 7","termid":"PBO:0043816"}


id: GO:1904812
data:
  {"annotated_genes":["SJAG_01877"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88703],"is_not":false,"summary":null,"term":"GO:1904812"}]},"cv_name":"biological_process","definition":"Any rRNA acetylation that is involved in maturation of SSU-rRNA.","definition_xrefs":["PMID:25402480","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA acetylation","termid":"GO:1990882"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"rRNA acetylation involved in maturation of SSU-rRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"rRNA acetylation involved in SSU-rRNA maturation","type":"exact"},{"name":"rRNA acetylation involved in processing of 20S pre-rRNA","type":"narrow"}],"termid":"GO:1904812","terms_by_termid":{"GO:1904812":null}}


id: PBO:0085814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels","termid":"PBO:0085814"}


id: GO:0102771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-(1,2-saturated acyl)sphinganine + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an N-[(2'R)-hydroxyacyl]sphinganine + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["RHEA:46512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dihydroceramide fatty acyl 2-hydroxylase activity","secondary_identifiers":["EC:1.14.18.7","MetaCyc:RXN-7796"],"synonyms":[{"name":"sphingolipid very long chain fatty acid alpha-hydroxylase activity","type":"related"}],"termid":"GO:0102771"}


id: PBO:0038469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 8","termid":"PBO:0038469"}


id: FYPO:0007685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is increased relative to normal under conditions of starvation for one or more nutrients.","definition_xrefs":["PMID:33574613","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased vegetative cell population growth during nutrient starvation","synonyms":[{"name":"fast vegetative cell population growth during nutrient starvation","type":"narrow"},{"name":"increased vegetative cell population growth during nutrient depletion","type":"exact"},{"name":"increased vegetative cell population growth during nutrient deprivation","type":"exact"},{"name":"increased vegetative cell population growth during nutrient limitation","type":"exact"},{"name":"increased vegetative cell population growth in response to nutrient starvation","type":"exact"},{"name":"resistant to nutrient starvation","type":"related"}],"termid":"FYPO:0007685"}


id: GO:0043767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-pyrrolysine + tRNA(Pyl) = AMP + diphosphate + L-pyrrolysyl-tRNA(Pyl).","definition_xrefs":["PMID:15314242","RHEA:19277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0016874","GO:0140101","GO:0003824"],"is_obsolete":false,"name":"pyrrolysyl-tRNA synthetase activity","secondary_identifiers":["MetaCyc:6.1.1.26-RXN","EC:6.1.1.26"],"synonyms":[{"name":"PylRS","type":"exact"},{"name":"pyrrolysine-tRNA ligase activity","type":"exact"}],"termid":"GO:0043767"}


id: GO:0031002
data:
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id: PBO:0057381
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id: PBO:0091014
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id: GO:0061231
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id: PBO:0057158
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id: GO:0005789
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id: FYPO:0001906
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id: PR:Q9UTC7
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id: GO:0060015
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id: PR:O94337
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id: PBO:0062650
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id: PBO:0046529
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id: PBO:0041201
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id: PR:Q10499
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An apoptosis-inducing factor 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis-inducing factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.14c","secondary_identifiers":["UniProtKB:Q10499"],"synonyms":[{"name":"Spom972h-AIFM3","type":"exact"}],"termid":"PR:Q10499"}


id: GO:0070894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of regulation of transposon integration, a process in which a transposable element is incorporated into another DNA molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transposon integration (obsolete GO:0070894)","termid":"GO:0070894"}


id: PBO:0080835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ybeY metalloendoribonuclease","termid":"PBO:0080835"}


id: PBO:0041819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac mesoderm enhancer-associated non-coding RNA","termid":"PBO:0041819"}


id: PBO:0054094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1447","termid":"PBO:0054094"}


id: PBO:0036223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_site_selection_from_asymmetrically_located_sites,_forming_incomplete_septum","termid":"PBO:0036223"}


id: GO:0002576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as histamine and serotonin by a platelet.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"platelet degranulation","synonyms":[{"name":"platelet exocytosis","type":"exact"}],"termid":"GO:0002576"}


id: SOFP:protein_id
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A protein sequence identifier","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_id","termid":"SOFP:protein_id"}


id: PBO:0071106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 108","termid":"PBO:0071106"}


id: PBO:0069243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 498, pseudogene","termid":"PBO:0069243"}


id: PBO:0061113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 4","termid":"PBO:0061113"}


id: FYPO:0006509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which telomere length is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology","termid":"FYPO:0006508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal telomere length","termid":"FYPO:0006509"}


id: PBO:0055061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2477","termid":"PBO:0055061"}


id: FYPO:0000501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitophagy is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitophagy","termid":"FYPO:0007590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased mitophagy","synonyms":[{"name":"increased autophagy of mitochondrion","type":"exact"},{"name":"mitophagy: increased","type":"related"}],"termid":"FYPO:0000501"}


id: PBO:0077617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 8","termid":"PBO:0077617"}


id: PBO:0058068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4287","termid":"PBO:0058068"}


id: GO:0021745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nucleus ambiguus over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:curators","GOC:cls","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleus ambiguus development","termid":"GO:0021745"}


id: GO:0046274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lignins, a class of polymers of phenylpropanoid units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin metabolic process","termid":"GO:0009808"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"lignin catabolic process","synonyms":[{"name":"lignin breakdown","type":"exact"},{"name":"lignin catabolism","type":"exact"},{"name":"lignin degradation","type":"exact"}],"termid":"GO:0046274"}


id: PBO:0041954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil and C2 domain containing 1B","termid":"PBO:0041954"}


id: PBO:0067914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 216","termid":"PBO:0067914"}


id: PR:Q09829
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf5 gene.","definition_xrefs":["UniProtKB:Q09829","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein C4G8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.03c","synonyms":[{"name":"Spom972h-puf5","type":"exact"}],"termid":"PR:Q09829"}


id: PR:O94342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tgp1 gene.","definition_xrefs":["UniProtKB:O94342","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolite transport protein C1271.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.09","synonyms":[{"name":"Spom972h-tgp1","type":"exact"}],"termid":"PR:O94342"}


id: GO:0016742
data:
  {"annotated_genes":["SJAG_03914","SJAG_04681","SJAG_05200","SJAG_01814","SJAG_03641","SJAG_02901","SJAG_01766","SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003864"},{"annotations":[92511,109126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004047"},{"annotations":[87405,90591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004372"},{"annotations":[87104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004479"},{"annotations":[115038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004643"},{"annotations":[113432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004644"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a hydroxymethyl- or formyl group from one compound (donor) to another (acceptor).","definition_xrefs":["EC:2.1.2.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring one-carbon groups","termid":"GO:0016741"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01368":null,"SJAG_01766":null,"SJAG_01814":null,"SJAG_02901":null,"SJAG_03641":null,"SJAG_03914":null,"SJAG_04681":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"hydroxymethyl-, formyl- and related transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016742","terms_by_termid":{"GO:0003864":null,"GO:0004047":null,"GO:0004372":null,"GO:0004479":null,"GO:0004643":null,"GO:0004644":null}}


id: PBO:0069971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1266, pseudogene","termid":"PBO:0069971"}


id: GO:0050249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + Renilla luciferin = adenosine 3',5'-diphosphate + H+ + luciferyl sulfate.","definition_xrefs":["RHEA:20481","EC:2.8.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"Renilla-luciferin sulfotransferase activity","secondary_identifiers":["MetaCyc:RENILLA-LUCIFERIN-SULFOTRANSFERASE-RXN","KEGG_REACTION:R03138"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:Renilla luciferin sulfotransferase activity","type":"related"},{"name":"Renilla-luciferin sulphotransferase activity","type":"exact"},{"name":"luciferin sulfokinase (3'-phosphoadenylyl sulfate:luciferin sulfotransferase)","type":"related"},{"name":"luciferin sulfokinase activity","type":"related"},{"name":"luciferin sulfotransferase activity","type":"broad"}],"termid":"GO:0050249"}


id: PBO:0053130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCT antisense RNA 1","termid":"PBO:0053130"}


id: PBO:0002317
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previusly annotated as dubious","termid":"PBO:0002317"}


id: PBO:0088211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small toxic protein; overexpression inhibits ergosterol biosynthesis; not required for normal growth, not conserved in related yeast species including S. paradoxus","termid":"PBO:0088211"}


id: GO:0008169
data:
  {"annotated_genes":["SJAG_03531","SJAG_01043","SJAG_01192","SJAG_02417","SJAG_03877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008425"},{"annotations":[109713,91728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009383"},{"annotations":[100367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003838"},{"annotations":[111516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004851"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the carbon atom of an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01043":null,"SJAG_01192":null,"SJAG_02417":null,"SJAG_03531":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"C-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008169","terms_by_termid":{"GO:0003838":null,"GO:0004851":null,"GO:0008425":null,"GO:0009383":null}}


id: SO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A candidate gene whose function has something in common biologically with the trait under investigation.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidate_gene","termid":"SO:0001867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional_candidate_gene","synonyms":[{"name":"functional candidate gene","type":"exact"},{"name":"functional target gene","type":"exact"}],"termid":"SO:0001869"}


id: PBO:0051506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKBKB divergent transcript","termid":"PBO:0051506"}


id: PBO:0028432
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytogamy","termid":"PBO:0028432"}


id: PBO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase (predicted)","termid":"PBO:0002234"}


id: GO:1903190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glyoxal.","definition_xrefs":["GOC:PARL","PMID:22523093","GOC:bf","GOC:TermGenie","PMID:23651081","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"glyoxal metabolic process","termid":"GO:1903189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"glyoxal catabolic process","synonyms":[{"name":"glyoxal breakdown","type":"exact"},{"name":"glyoxal catabolism","type":"exact"},{"name":"glyoxal degradation","type":"exact"}],"termid":"GO:1903190"}


id: GO:0061578
data:
  {"annotated_genes":["SJAG_01528","SJAG_01281"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87739,92649],"is_not":false,"summary":null,"term":"GO:0061578"}]},"cv_name":"molecular_function","definition":"Hydrolysis of a ubiquitin unit from a ubiquitinated protein linked via the Lys63 residue of ubiquitin.","definition_xrefs":["GOC:pg","PMID:18313383","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01281":null,"SJAG_01528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0008233","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"K63-linked deubiquitinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9750942","Reactome:R-HSA-8869506","Reactome:R-HSA-5691439","Reactome:R-HSA-5691431","Reactome:R-HSA-5691411","Reactome:R-HSA-936381","Reactome:R-HSA-936390","Reactome:R-HSA-9685219","Reactome:R-HSA-5357845","Reactome:R-HSA-9817400","Reactome:R-HSA-5696547","Reactome:R-HSA-9711016","Reactome:R-HSA-741411","Reactome:R-HSA-688136","Reactome:R-HSA-5690856"],"synonyms":[{"name":"K63-specific deubiquitinase activity","type":"exact"},{"name":"Lys63-specific deubiquitinase activity","type":"exact"}],"termid":"GO:0061578","terms_by_termid":{"GO:0061578":null}}


id: PBO:0070117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 31 pseudogene","termid":"PBO:0070117"}


id: PBO:0052931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-3","termid":"PBO:0052931"}


id: PBO:0036186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036186"}


id: PR:Q9UT24
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U5 small nuclear ribonucleoprotein 200 kDa helicase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11752:SF7","PRO:DNx","OMA:SCHPO00590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor brr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.03c","secondary_identifiers":["UniProtKB:Q9UT24"],"synonyms":[{"name":"Spom972h-SNRNP200","type":"exact"},{"name":"pre-mRNA-splicing factor spp41 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pre-mRNA-splicing helicase BRR2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT24"}


id: FYPO:0008202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic sister chromatid separation occurs in meiosis I due to erroneous merotelic kinetochore attachment.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid segregation","termid":"FYPO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"equational sister chromatid separation at meiosis I","termid":"FYPO:0008202"}


id: GO:1903504
data:
  {"annotated_genes":["SJAG_01679","SJAG_03681","SJAG_02169","SJAG_02336","SJAG_02451","SJAG_01837","SJAG_04259","SJAG_03126","SJAG_01297","SJAG_00883","SJAG_03353"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110359,111987,95685,108051,104345,109879,99995,86834,103323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[90303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[112769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[90304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic spindle checkpoint.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23442800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of spindle checkpoint","termid":"GO:0090231"},{"relation_name":"regulates","term_name":"mitotic spindle checkpoint signaling","termid":"GO:0071174"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic spindle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitotic cell cycle spindle checkpoint","type":"exact"}],"termid":"GO:1903504","terms_by_termid":{"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0068011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 315","termid":"PBO:0068011"}


id: GO:0050179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threo-3-phenylserine = benzaldehyde + glycine.","definition_xrefs":["RHEA:21712","EC:4.1.2.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"phenylserine aldolase activity","secondary_identifiers":["KEGG_REACTION:R01766","MetaCyc:PHENYLSERINE-ALDOLASE-RXN"],"synonyms":[{"name":"L-threo-3-phenylserine benzaldehyde-lyase (glycine-forming)","type":"related"},{"name":"L-threo-3-phenylserine benzaldehyde-lyase activity","type":"related"}],"termid":"GO:0050179"}


id: PBO:0083137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity ser/thr and tyrosine protein kinase; roles in chromosome segregation, meiotic entry, genome stability, phosphorylation-dependent protein degradation (Rcn1p and Cdc6p), inhibition of protein kinase A, transcriptional regulation, inhibition of RNA pol III, calcium stress and inhibition of Clb2p-Cdc28p after nuclear division; MCK1 has a paralog, YGK3, that arose from the whole genome duplication","termid":"PBO:0083137"}


id: PBO:0056581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCTS family member 2","termid":"PBO:0056581"}


id: PBO:0061906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optineurin","termid":"PBO:0061906"}


id: PBO:0077344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 86A","termid":"PBO:0077344"}


id: PBO:0065006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM10 divergent transcript","termid":"PBO:0065006"}


id: PBO:0059552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Ser (AGU/C) 2","termid":"PBO:0059552"}


id: GO:1905046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["PMID:22393241","GOC:BHF","GOC:rph","GOC:TermGenie","GO_REF:0000058","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of Schwann cell proliferation","termid":"GO:0010625"},{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"},{"relation_name":"positively_regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Schwann cell proliferation involved in axon regeneration","synonyms":[{"name":"activation of Schwann cell proliferation involved in axon regeneration","type":"narrow"},{"name":"up regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"up-regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"upregulation of Schwann cell proliferation involved in axon regeneration","type":"exact"}],"termid":"GO:1905046"}


id: PBO:0077080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TICAM2 antisense RNA 1","termid":"PBO:0077080"}


id: PBO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ataxia-ocular apraxia 2","termid":"PBO:0001975"}


id: GO:1905151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated sodium channel activity.","definition_xrefs":["GOC:TermGenie","PMID:24198377","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of voltage-gated sodium channel activity","termid":"GO:1905150"},{"relation_name":"is_a","term_name":"negative regulation of sodium ion transmembrane transporter activity","termid":"GO:2000650"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of voltage-gated sodium channel activity","synonyms":[{"name":"down regulation of voltage gated sodium channel activity","type":"exact"},{"name":"down regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"down regulation of voltage-gated sodium channel activity","type":"exact"},{"name":"down regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"down regulation of voltage-sensitive sodium channel","type":"exact"},{"name":"down-regulation of voltage gated sodium channel activity","type":"exact"},{"name":"down-regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated sodium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"down-regulation of voltage-sensitive sodium channel","type":"exact"},{"name":"downregulation of voltage gated sodium channel activity","type":"exact"},{"name":"downregulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"downregulation of voltage-gated sodium channel activity","type":"exact"},{"name":"downregulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"downregulation of voltage-sensitive sodium channel","type":"exact"},{"name":"inhibition of voltage gated sodium channel activity","type":"narrow"},{"name":"inhibition of voltage-dependent sodium channel activity","type":"narrow"},{"name":"inhibition of voltage-gated sodium channel activity","type":"narrow"},{"name":"inhibition of voltage-gated sodium ion channel activity","type":"narrow"},{"name":"inhibition of voltage-sensitive sodium channel","type":"narrow"},{"name":"negative regulation of voltage gated sodium channel activity","type":"exact"},{"name":"negative regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"negative regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"negative regulation of voltage-sensitive sodium channel","type":"exact"}],"termid":"GO:1905151"}


id: GO:0141124
data:
  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id: PBO:0038888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin 1","termid":"PBO:0038888"}


id: PBO:0057173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 325","termid":"PBO:0057173"}


id: GO:0061324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The canonical Wnt signaling pathway that contributes to the modulation of the expansion of a population of cardiac outflow tract cells.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation (obsolete GO:0061324)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of cardiac outflow tract cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation","type":"exact"}],"termid":"GO:0061324"}


id: FYPO:0006025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more actin filaments does not occur. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished actin filament binding","synonyms":[{"name":"abolished F-actin binding","type":"exact"},{"name":"abolished filamentous actin binding","type":"exact"},{"name":"actin filament binding abolished","type":"exact"}],"termid":"FYPO:0006025"}


id: PBO:0067784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 86","termid":"PBO:0067784"}


id: GO:0005757
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that connects the inner and outer membranes of animal mitochondria and acts as a pore that can open transiently to allow free diffusion of solutes between the mitochondrial matrix and the cytosol. The pore complex is formed of the voltage-dependent anion channel (VDAC), the adenine nucleotide translocase (ANT) and cyclophilin-D (CyP-D).","definition_xrefs":["PMID:10393078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pore complex","termid":"GO:0046930"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial envelope","termid":"GO:0005740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mitochondrial permeability transition pore complex","synonyms":[{"name":"MPTP complex","type":"exact"},{"name":"PTPC","type":"broad"},{"name":"mitochondrial PT pore complex","type":"exact"}],"termid":"GO:0005757"}


id: GO:0031927
data:
  {"annotated_genes":["SJAG_02962","SJAG_03652","SJAG_03808","SJAG_02152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86265,86266,113548,114811],"is_not":false,"summary":null,"term":"GO:0031927"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyridoxamine from one side of a membrane to the other. Pyridoxamine, 4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol, is one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"pyridoxamine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031927","terms_by_termid":{"GO:0031927":null}}


id: GO:2001031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular glucuronidation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of cellular glucuronidation","termid":"GO:2001029"},{"relation_name":"positively_regulates","term_name":"cellular glucuronidation","termid":"GO:0052695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellular glucuronidation","synonyms":[{"name":"positive regulation of cellular glucuronide biosynthesis","type":"exact"},{"name":"positive regulation of cellular glucuronide biosynthetic process","type":"exact"},{"name":"positive regulation of cellular glucuronoside biosynthesis","type":"exact"},{"name":"positive regulation of cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:2001031"}


id: GO:0032898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a neurotrophin due to biosynthesis or secretion by cells in a neuron's target field, resulting in an increase in its intracellular or extracellular levels. A neurotrophin is any of a family of growth factors that prevent apoptosis in neurons and promote nerve growth.","definition_xrefs":["GOC:ecd","GOC:mah","GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurotrophin production","termid":"GO:0032898"}


id: GO:0046409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: shikimate or quinate ester of p-coumaric acid + NADPH + H+ + O2 = caffeic acid conjugate (caffeoyl shikimic acid or chlorogenic acid) + H2O + NADP+.","definition_xrefs":["PMID:11891223","PMID:11429408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"p-coumarate 3-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP98A3","type":"narrow"}],"termid":"GO:0046409"}


id: RO:0003302
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity has some causal or contributing role that influences the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causes_or_contributes_to_condition","termid":"RO:0003302"}


id: PBO:0080563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP11 pseudogene 3","termid":"PBO:0080563"}


id: PBO:0057188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 346","termid":"PBO:0057188"}


id: PBO:0062843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast stimulating factor 1","termid":"PBO:0062843"}


id: FYPO:0007949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of (1->3)-beta-D-glucan measured is greater than normal.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased beta-glucan level","termid":"FYPO:0001194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased (1->3)-beta-D-glucan level","synonyms":[{"name":"increased (1,3)beta-D-glucan level","type":"exact"}],"termid":"FYPO:0007949"}


id: PBO:0005477
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MMS2","termid":"PBO:0005477"}


id: PATO:0000641
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000641 deposition defective (obsolete PATO:0000641)","termid":"PATO:0000641"}


id: PBO:0038294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"source_database","termid":"PBO:0038294"}


id: PBO:0089934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase H3-K36 specific, Lid2 complex subunit Jmj3","termid":"PBO:0089934"}


id: PBO:0004157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase Lac1","termid":"PBO:0004157"}


id: GO:0016748
data:
  {"annotated_genes":["SJAG_00097","SJAG_03163","SJAG_03961"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77363,91882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003870"},{"annotations":[108162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004149"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a succinyl (3-carboxypropanoyl) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_03163":null,"SJAG_03961":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"succinyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016748","terms_by_termid":{"GO:0003870":null,"GO:0004149":null}}


id: PBO:0083399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF ULP2/YIL031W","termid":"PBO:0083399"}


id: GO:0047387
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + serine phosphoethanolamine = H+ + phosphoethanolamine + serine.","definition_xrefs":["EC:3.1.4.13","RHEA:17113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"serine-ethanolaminephosphate phosphodiesterase activity","secondary_identifiers":["KEGG_REACTION:R02817","MetaCyc:3.1.4.13-RXN"],"synonyms":[{"name":"SEP diesterase activity","type":"related"},{"name":"serine ethanolamine phosphodiester phosphodiesterase activity","type":"related"},{"name":"serine-phosphoethanolamine ethanolaminephosphohydrolase activity","type":"related"}],"termid":"GO:0047387"}


id: PBO:0070447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 4","termid":"PBO:0070447"}


id: PBO:0062158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily H member 6 pseudogene","termid":"PBO:0062158"}


id: PBO:0085911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; member of the ovarian tumor-like (OTU) superfamily of predicted cysteine proteases; shows cytoplasmic localization; protein abundance increases in response to DNA replication stress","termid":"PBO:0085911"}


id: GO:0099633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the membrane adjacent to a postsynaptic specialization (e.g. post synaptic density).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"},{"relation_name":"is_a","term_name":"protein localization to postsynaptic membrane","termid":"GO:1903539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to postsynaptic specialization membrane","synonyms":[{"name":"protein localisation in postsynaptic specialization membrane","type":"exact"}],"termid":"GO:0099633"}


id: PBO:0089676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator family transmembrane transporter Mug111","termid":"PBO:0089676"}


id: PBO:0027437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nonsense-mediated_decay","termid":"PBO:0027437"}


id: GO:0030662
data:
  {"annotated_genes":["SJAG_04513","SJAG_04391","SJAG_00108","SJAG_00192","SJAG_02805","SJAG_01508","SJAG_04569","SJAG_00557","SJAG_00072","SJAG_01167","SJAG_02349","SJAG_02282","SJAG_04474","SJAG_03558","SJAG_00379","SJAG_04517","SJAG_04565","SJAG_03907","SJAG_02539","SJAG_05345","SJAG_05344","SJAG_02234","SJAG_04023","SJAG_03153","SJAG_00906","SJAG_04002","SJAG_02482","SJAG_00800","SJAG_00284","SJAG_01939","SJAG_02453","SJAG_04070","SJAG_00104","SJAG_04644","SJAG_01809","SJAG_01633","SJAG_04609","SJAG_02177"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97225,114935,108874,109092],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[92369,107680,104423,107739],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[90993,108996],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[114555,110966],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"},{"annotations":[90288,85032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030665"},{"annotations":[89313,113475,99368,100218,94557,94646,109846,103211,112466],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[70320,102651,108805,89450,104815,112685,74132,106295,91617,108065],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[104115,91657,105888,97177,110283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0012507"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a coated vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00104":null,"SJAG_00108":null,"SJAG_00192":null,"SJAG_00284":null,"SJAG_00379":null,"SJAG_00557":null,"SJAG_00800":null,"SJAG_00906":null,"SJAG_01167":null,"SJAG_01508":null,"SJAG_01633":null,"SJAG_01809":null,"SJAG_01939":null,"SJAG_02177":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02482":null,"SJAG_02539":null,"SJAG_02805":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_04002":null,"SJAG_04023":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04513":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"coated vesicle membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030662","terms_by_termid":{"GO:0012507":null,"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030665":null}}


id: PBO:0064847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14A","termid":"PBO:0064847"}


id: PBO:0050053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, T (pseudogene)","termid":"PBO:0050053"}


id: PBO:0067173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 229, pseudogene","termid":"PBO:0067173"}


id: PBO:0074076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 51","termid":"PBO:0074076"}


id: PBO:0061123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 12","termid":"PBO:0061123"}


id: GO:0052474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the T-cell mediated immune response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont T-cell mediated immune response (obsolete GO:0052474)","synonyms":[{"name":"negative regulation by organism of symbiont T-cell mediated immune response","type":"exact"}],"termid":"GO:0052474"}


id: GO:0019044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The perpetuation of a latent state, generally by repressing the viruses own lytic genes expression and ensuring expression of viral genes which function to keep the viral genome from being detected by the host defense mechanisms.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral latency","termid":"GO:0019042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of viral latency","secondary_identifiers":["GO:0075716","GO:0032360"],"synonyms":[{"name":"latent virus maintenance","type":"exact"},{"name":"prophage maintenance","type":"exact"},{"name":"provirus maintenance","type":"exact"}],"termid":"GO:0019044"}


id: PBO:0044888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEPDC1 antisense RNA 1","termid":"PBO:0044888"}


id: PBO:0082004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 5","termid":"PBO:0082004"}


id: PBO:0040317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit beta pseudogene 1","termid":"PBO:0040317"}


id: FYPO:0007174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is abnormal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during vegetative growth","termid":"FYPO:0001268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore during mitotic interphase","synonyms":[{"name":"abnormal protein localisation to kinetochore during interphase during vegetative growth","type":"exact"},{"name":"abnormal protein localization to kinetochore during interphase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0007174"}


id: PBO:0034096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_syntenic_paralogy_relationship_with","termid":"PBO:0034096"}


id: PBO:0045254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1","termid":"PBO:0045254"}


id: PBO:0066535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 2","termid":"PBO:0066535"}


id: PBO:0069669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 946, pseudogene","termid":"PBO:0069669"}


id: PBO:0038782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activin A receptor like type 1","termid":"PBO:0038782"}


id: PBO:0033751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_intergenic_meiotic_recombination","termid":"PBO:0033751"}


id: PBO:0077172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tolloid like 1","termid":"PBO:0077172"}


id: FYPO:0007880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is normal (i.e. indistinguishable from wild type) during a cellular response to methyl methanesulfonate. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PMID:34608864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein degradation during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal protein breakdown during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal protein catabolic process during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal protein catabolism during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal protein degradation during cellular response to MMS","type":"exact"},{"name":"normal protein degradation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein degradation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"}],"termid":"FYPO:0007880"}


id: PBO:0054507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1907","termid":"PBO:0054507"}


id: PBO:0071366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 25","termid":"PBO:0071366"}


id: GO:0036034
data:
  {"annotated_genes":["SJAG_00973","SJAG_03421"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84351,101772],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001178"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mediator complex. The mediator complex is a protein complex that interacts with the carboxy-terminal domain of the largest subunit of RNA polymerase II and plays an active role in transducing the signal from a transcription factor to the transcriptional machinery. The Saccharomyces complex contains several identifiable subcomplexes: a head domain comprising Srb2, -4, and -5, Med6, -8, and -11, and Rox3 proteins; a middle domain comprising Med1, -4, and -7, Nut1 and -2, Cse2, Rgr1, Soh1, and Srb7 proteins; a tail consisting of Gal11p, Med2p, Pgd1p, and Sin4p; and a regulatory subcomplex comprising Ssn2, -3, and -8, and Srb8 proteins. Metazoan mediator complexes have similar modular structures and include homologs of yeast Srb and Med proteins.","definition_xrefs":["PMID:17641689","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00973":null,"SJAG_03421":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"mediator complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036034","terms_by_termid":{"GO:2001178":null}}


id: PBO:0066493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 4","termid":"PBO:0066493"}


id: PR:P50521
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hxk2 gene.","definition_xrefs":["UniProtKB:P50521","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexokinase-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.07c","synonyms":[{"name":"Spom972h-hxk2","type":"exact"}],"termid":"PR:P50521"}


id: PBO:0109357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JUN divergent transcript","termid":"PBO:0109357"}


id: GO:0080081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosidic link in 4-methylumbelliferyl-beta-D-glucopyranoside.","definition_xrefs":["PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity","termid":"GO:0080081"}


id: GO:1900440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900741"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"}


id: GO:0038165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by oncostatin-M (OSM) binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. OSM can signal via at least two different receptors (a specific receptor and a LIF receptor) to activate different downstream signal transduction pathways.","definition_xrefs":["PMID:12811586","PMID:10579456","GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"oncostatin-M-mediated signaling pathway","synonyms":[{"name":"OSM signaling pathway","type":"exact"},{"name":"oncostatin-M signaling pathway","type":"exact"}],"termid":"GO:0038165"}


id: GO:0033937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of the beta-ketopyranosidic linkages of 3-deoxy-D-manno-2-octulosonate in capsular polysaccharides.","definition_xrefs":["EC:3.2.1.124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"3-deoxy-2-octulosonidase activity","secondary_identifiers":["MetaCyc:3.2.1.124-RXN"],"synonyms":[{"name":"2-keto-3-deoxyoctonate hydrolase activity","type":"related"},{"name":"capsular-polysaccharide 3-deoxy-D-manno-2-octulosonohydrolase activity","type":"related"},{"name":"octulofuranosylono hydrolase activity","type":"related"},{"name":"octulopyranosylonohydrolase activity","type":"related"},{"name":"octulosylono hydrolase activity","type":"related"}],"termid":"GO:0033937"}


id: PBO:0039626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A8 like 1","termid":"PBO:0039626"}


id: PBO:0078562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 49B","termid":"PBO:0078562"}


id: PBO:0057973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689e","termid":"PBO:0057973"}


id: PBO:0048038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrous sheath interacting protein 1","termid":"PBO:0048038"}


id: PBO:0056227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member F1","termid":"PBO:0056227"}


id: PBO:0072996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm polycomb group protein like 4","termid":"PBO:0072996"}


id: GO:0004513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide = CMP + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-D-glucosylceramide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete neolactotetraosylceramide alpha-2,3-sialyltransferase activity (obsolete GO:0004513)","synonyms":[{"name":"N-acetyllactosaminide alpha-2,3-sialyltransferase","type":"broad"},{"name":"alpha2->3 sialyltransferase activity","type":"related"},{"name":"neolactotetraosylceramide alpha-2,3-sialyltransferase","type":"related"}],"termid":"GO:0004513"}


id: GO:0006970
data:
  {"annotated_genes":["SJAG_04668","SJAG_04205","SJAG_02883","SJAG_00661","SJAG_02592","SJAG_00596","SJAG_02342","SJAG_01084","SJAG_04726","SJAG_03893","SJAG_03185","SJAG_00409","SJAG_02091"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[85629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[98893,106431,90469,110554,113157,102578,112376,92078,100618,87987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[96270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_01084":null,"SJAG_02091":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_02883":null,"SJAG_03185":null,"SJAG_03893":null,"SJAG_04205":null,"SJAG_04668":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to osmotic stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"osmotic response","type":"exact"},{"name":"osmotic stress response","type":"exact"}],"termid":"GO:0006970","terms_by_termid":{"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null}}


id: PBO:0054526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1926","termid":"PBO:0054526"}


id: PR:Q10181
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rit1 gene.","definition_xrefs":["UniProtKB:Q10181","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3F10.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.06c","synonyms":[{"name":"Spom972h-rit1","type":"exact"}],"termid":"PR:Q10181"}


id: PBO:0085483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable subtilisin-family protease; role in formation of the dityrosine layer of spore walls; localizes to the spore wall and also the nuclear envelope and ER region in mature spores","termid":"PBO:0085483"}


id: PR:P87299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug74 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 74 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.08c","synonyms":[{"name":"Spom972h-mug74","type":"exact"}],"termid":"PR:P87299"}


id: GO:0019812
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex composed of two copies of a restriction (R) subunit, two copies of a methylation (M) subunit, and one copy of a specificity (S) subunit. This complex recognizes specific short DNA sequences (through the S subunit), and binds to them. If the recognition site is hemimethylated, the complex acts as a methyltransferase which modifies the recognition site, using S-adenosylmethionine as the methyl donor. Only the M and S subunits are required for this reaction. If the complex binds to an unmethylated recognition site, then the complex translocates the DNA bidirectionally in an ATP-dependent manner. When the translocation is stalled by impact with another complex or unusual DNA structure, the enzyme functions as an endonuclease and cleavage of the DNA will occur, hundreds or thousands of base pairs away from the recognition site. These DNA restriction systems are used by bacteria to defend against phage and other foreign DNA that may enter a cell.","definition_xrefs":["PMID:12654995","PMID:15788748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"type I site-specific deoxyribonuclease complex","synonyms":[{"name":"type I restriction enzyme complex","type":"exact"}],"termid":"GO:0019812"}


id: GO:0033961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-stilbene oxide + H2O = (+)-(1R,2R)-1,2-diphenylethane-1,2-diol.","definition_xrefs":["EC:3.3.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"cis-stilbene-oxide hydrolase activity","secondary_identifiers":["RHEA:23900","MetaCyc:3.3.2.9-RXN","Reactome:R-HSA-5694077"],"synonyms":[{"name":"arene-oxide hydratase activity","type":"broad"},{"name":"aryl epoxide hydrase activity","type":"broad"},{"name":"benzo(a)pyrene-4,5-epoxide hydratase activity","type":"narrow"},{"name":"benzo[a]pyrene-4,5-oxide hydratase activity","type":"narrow"},{"name":"cis-epoxide hydrolase activity","type":"related"},{"name":"epoxide hydrase activity","type":"broad"},{"name":"epoxide hydratase activity","type":"broad"},{"name":"mEH","type":"related"},{"name":"microsomal epoxide hydrase activity","type":"narrow"},{"name":"microsomal epoxide hydratase activity","type":"narrow"},{"name":"microsomal epoxide hydrolase activity","type":"narrow"}],"termid":"GO:0033961"}


id: PBO:0049541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 5","termid":"PBO:0049541"}


id: SO:0001911
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where copies of a feature are increased relative to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_change","termid":"SO:0001563"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_increase","synonyms":[{"name":"copy number increase","type":"exact"}],"termid":"SO:0001911"}


id: PBO:0038360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transports","termid":"PBO:0038360"}


id: PBO:0065576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parathyroid hormone 1 receptor","termid":"PBO:0065576"}


id: PBO:0072211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 10","termid":"PBO:0072211"}


id: PBO:0087221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scaffold protein responsible for phagophore assembly site organization; regulatory subunit of an autophagy-specific complex that includes Atg1p and Atg13p; stimulates Atg1p kinase activity; human ortholog RB1CC1/FIP200 interacts with p53, which inhibits autophagy in human cells","termid":"PBO:0087221"}


id: PBO:0088000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twin Cx(9)C protein involved in cytochrome c oxidase organization; organization includes assembly or stability; localizes to the mitochondrial intermembrane space via the Mia40p-Erv1p system; interacts genetically with CYC1 and with cytochrome c oxidase assembly factors","termid":"PBO:0088000"}


id: GO:0036146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mycotoxin stimulus. A mycotoxin is a toxic chemical substance produced by fungi.","definition_xrefs":["GOC:di","PMID:20548963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mycotoxin","termid":"GO:0010046"},{"relation_name":"is_a","term_name":"cellular response to toxic substance","termid":"GO:0097237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mycotoxin","termid":"GO:0036146"}


id: PBO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic mitochondrial protein (predicted)","termid":"PBO:0002043"}


id: GO:0071032
data:
  {"annotated_genes":["SJAG_04198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112423],"is_not":false,"summary":null,"term":"GO:0071032"}]},"cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading incorrectly formed or aberrant nuclear mRNPs docked at the nuclear pore complex prior to export to the cytoplasm.","definition_xrefs":["PMID:18644474","GOC:dgf","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear mRNA surveillance","termid":"GO:0071028"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04198":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"nuclear mRNA surveillance of mRNP export","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear mRNA catabolic process of mRNAs in aberrant mRNPs","type":"exact"},{"name":"nuclear mRNA quality control of mRNAs in aberrant mRNPs","type":"exact"}],"termid":"GO:0071032","terms_by_termid":{"GO:0071032":null}}


id: PBO:0064885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 scaffold subunit Abeta","termid":"PBO:0064885"}


id: GO:0051066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a dihydrobiopterin, a reduced pteridine derivative related to folic acid; it acts as an electron carrier in tyrosine biosynthesis and its quinoid form is produced by oxidation of tetrahydrobiopterin in several biological hydroxylation reactions.","definition_xrefs":["PMID:2557335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dihydrobiopterin metabolic process","synonyms":[{"name":"6,7-dihydrobiopterin metabolic process","type":"narrow"},{"name":"7,8-dihydrobiopterin metabolic process","type":"narrow"},{"name":"dihydrobiopterin reduction","type":"narrow"},{"name":"dihydropterin metabolic process","type":"exact"},{"name":"dihydropterin metabolism","type":"exact"}],"termid":"GO:0051066"}


id: GO:0075225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium germination","termid":"GO:0075223"},{"relation_name":"is_a","term_name":"negative regulation of sporangium development","termid":"GO:0075312"},{"relation_name":"negatively_regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporangium germination","synonyms":[{"name":"negative regulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075225"}


id: GO:0035860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a glial cell-derived neurotrophic factor receptor.","definition_xrefs":["PMID:29245123","GOC:yaf","PMID:12953054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"glial cell-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"GDNF receptor signaling pathway","type":"exact"},{"name":"glial cell derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"glial cell line-derived neurotrophic factor receptor signalling pathway","type":"exact"},{"name":"glial cell-derived neurotrophic factor receptor signalling pathway","type":"exact"}],"termid":"GO:0035860"}


id: GO:1901519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aspyridone B.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"aspyridone B metabolic process","synonyms":[{"name":"aspyridone B metabolism","type":"exact"}],"termid":"GO:1901519"}


id: PR:O74507
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC594.04c gene.","definition_xrefs":["UniProtKB:O74507","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C594.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.04c","synonyms":[{"name":"Spom972h-SPCC594.04c","type":"exact"}],"termid":"PR:O74507"}


id: GO:0018734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: butyrolactone + H2O = 4-hydroxybutanoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete butyrolactone hydrolase activity (obsolete GO:0018734)","termid":"GO:0018734"}


id: FYPO:0007699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in a homothallic population undergoes conjugation with non-sister cells.","definition_xrefs":["PMID:30279276","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased conjugation frequency","termid":"FYPO:0000303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased frequency of conjugation with non-sister cells","synonyms":[{"name":"decreased conjugation frequency with non-sister cells","type":"exact"},{"name":"decreased frequency of mating with non-sister cells","type":"exact"},{"name":"decreased mating efficiency with non-sister cells","type":"related"},{"name":"decreased mating frequency with non-sister cells","type":"exact"}],"termid":"FYPO:0007699"}


id: PBO:0048126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 7","termid":"PBO:0048126"}


id: GO:0033991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 1,5-anhydro-D-fructose = 2-hydroxy-2-(hydroxymethyl)-2H-pyran-3(6H)-one + H2O; (1a) 1,5-anhydro-D-fructose = 1,5-anhydro-4-deoxy-D-glycero-hex-3-en-2-ulose + H2O and (1b) 1,5-anhydro-4-deoxy-D-glycero-hex-3-en-2-ulose = 2-hydroxy-2-(hydroxymethyl)-2H-pyran-3(6H)-one.","definition_xrefs":["EC:4.2.1.110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"aldos-2-ulose dehydratase activity","secondary_identifiers":["RHEA:12100","MetaCyc:RXN-14306"],"synonyms":[{"name":"1,5-anhydro-D-fructose dehydratase (microthecin-forming) activity","type":"related"},{"name":"1,5-anhydro-D-fructose hydro-lyase (microthecin-forming) activity","type":"related"},{"name":"AUDH","type":"related"},{"name":"pyranosone dehydratase activity","type":"related"}],"termid":"GO:0033991"}


id: FYPO:0007834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is altered such that more of the protein is present at the 3' end, and less at the 5' end, than normal.","definition_xrefs":["PMID:31837996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"protein displaced from 5' end to 3' end of RNA polymerase II-transcribed genes","synonyms":[{"name":"decreased protein localization to chromatin at 5' end of RNA polymerase II-transcribed genes with increased localization towards 3' end","type":"exact"},{"name":"protein displaced from 5' end to 3' end of RNA polymerase II-transcribed genes during mitotic cell cycle","type":"related"},{"name":"protein displaced from 5' end to 3' end of RNA polymerase II-transcribed genes during vegetative growth","type":"exact"}],"termid":"FYPO:0007834"}


id: PBO:0005185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger splicing factor Bpb1","termid":"PBO:0005185"}


id: GO:1904092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagic cell death.","definition_xrefs":["GOC:TermGenie","PMID:25736836","GOC:bhm","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"autophagic cell death","termid":"GO:0048102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of autophagic cell death","synonyms":[{"name":"regulation of autophagic death","type":"broad"},{"name":"regulation of programmed cell death by autophagy","type":"broad"},{"name":"regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"regulation of type II programmed cell death","type":"related"}],"termid":"GO:1904092"}


id: PBO:0042153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 15","termid":"PBO:0042153"}


id: PBO:0065818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4B-EGLN2 readthrough (NMD candidate)","termid":"PBO:0065818"}


id: PBO:0004827
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forced sequence to be coding","termid":"PBO:0004827"}


id: PR:Q9P7Q1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.02c gene.","definition_xrefs":["UniProtKB:Q9P7Q1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacid dehydrogenase homolog 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.02c","synonyms":[{"name":"Spom972h-SPAC186.02c","type":"exact"}],"termid":"PR:Q9P7Q1"}


id: PATO:0001903
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's having two directions.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bi-directional","termid":"PATO:0001903"}


id: GO:0043493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of a large and small subunit which catalyze the packaging of DNA into viral heads. Note that not all viral terminases have this structure, some exist as single polypeptides.","definition_xrefs":["GOC:bf","GOC:mlg","GOC:bm","GOC:jl","PMID:18687036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"viral terminase complex","synonyms":[{"name":"phage terminase complex","type":"narrow"},{"name":"virus terminase complex","type":"exact"}],"termid":"GO:0043493"}


id: GO:0070427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand (such as a bacterial peptidoglycan) to a cytoplasmic nucleotide-binding oligomerization domain containing 1 (NOD1) protein receptor, and ending with regulation of a downstream cellular process.","definition_xrefs":["GOC:add","PMID:17944960","PMID:18585455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nucleotide-binding oligomerization domain containing 1 signaling pathway","synonyms":[{"name":"NOD1 signaling pathway","type":"exact"},{"name":"nucleotide-binding oligomerization domain containing 1 signalling pathway","type":"exact"}],"termid":"GO:0070427"}


id: GO:0016622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","secondary_identifiers":["EC:1.2.2.-"],"termid":"GO:0016622"}


id: PBO:0066051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP2A, member of RAS oncogene family","termid":"PBO:0066051"}


id: GO:0003033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about a lack of oxygen are received and are converted to a molecular signal by chemoreceptors in the aortic bodies.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hypoxic conditions in blood by chemoreceptor signaling","termid":"GO:0002007"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by aortic body chemoreceptor signaling","termid":"GO:0003028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signaling","synonyms":[{"name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003033"}


id: GO:0007306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of the chorion portion of the egg, which is a protective, noncellular membrane that surrounds the eggs of various animals including insects and fish.","definition_xrefs":["ISBN:0879694238","PMID:24804966","GOC:mtg_sensu","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"egg chorion assembly","synonyms":[{"name":"eggshell chorion formation","type":"related"},{"name":"insect chorion formation","type":"related"}],"termid":"GO:0007306"}


id: PBO:0049930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hedgehog acyltransferase like","termid":"PBO:0049930"}


id: PBO:0038634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitase 2","termid":"PBO:0038634"}


id: PBO:0045977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain containing 3","termid":"PBO:0045977"}


id: GO:2001104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a heptasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"heptasaccharide transport","termid":"GO:2001104"}


id: GO:0033665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which the symbiont regulates the increase in its size or mass, or its progression from an initial condition to a later condition, within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:tb","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of growth or development of symbiont in host (obsolete GO:0033665)","synonyms":[{"name":"modulation of growth or development of organism within host","type":"exact"},{"name":"modulation of growth or development of symbiont within host","type":"exact"},{"name":"modulation of invasive growth","type":"broad"},{"name":"regulation of growth or development of symbiont in host","type":"exact"},{"name":"regulation of growth or development of symbiont within host","type":"exact"}],"termid":"GO:0033665"}


id: GO:1902767
data:
  {"annotated_genes":["SJAG_04568","SJAG_00413","SJAG_03715","SJAG_02719","SJAG_04499","SJAG_00580","SJAG_04865","SJAG_03352","SJAG_03349","SJAG_01474","SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102612,95692,110989,105573,107395,92697,84832,90548,94151,97976,109842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoprenoid via mevalonate.","definition_xrefs":["GOC:TermGenie","GO_REF:0000092","GOC:mengo_curators","PMID:11078528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00580":null,"SJAG_01474":null,"SJAG_02719":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04499":null,"SJAG_04568":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"isoprenoid biosynthetic process via mevalonate","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"isoprenoid anabolism via mevalonate","type":"exact"},{"name":"isoprenoid biosynthesis via mevalonate","type":"exact"},{"name":"isoprenoid formation via mevalonate","type":"exact"},{"name":"isoprenoid synthesis via mevalonate","type":"exact"}],"termid":"GO:1902767","terms_by_termid":{"GO:0010142":null}}


id: PBO:0002232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytosis regulator (predicted)","termid":"PBO:0002232"}


id: PBO:0065437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 10","termid":"PBO:0065437"}


id: GO:1900185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xanthone-containing compound biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900183"},{"relation_name":"positively_regulates","term_name":"xanthone-containing compound biosynthetic process","termid":"GO:2001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of xanthone-containing compound biosynthetic process","synonyms":[{"name":"activation of xanthone biosynthesis","type":"narrow"},{"name":"activation of xanthone biosynthetic process","type":"narrow"},{"name":"activation of xanthone-containing compound anabolism","type":"exact"},{"name":"activation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"activation of xanthone-containing compound biosynthetic process","type":"narrow"},{"name":"activation of xanthone-containing compound formation","type":"exact"},{"name":"activation of xanthone-containing compound synthesis","type":"exact"},{"name":"positive regulation of xanthone biosynthesis","type":"narrow"},{"name":"positive regulation of xanthone biosynthetic process","type":"narrow"},{"name":"positive regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"positive regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"positive regulation of xanthone-containing compound formation","type":"exact"},{"name":"positive regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"up regulation of xanthone biosynthesis","type":"narrow"},{"name":"up regulation of xanthone biosynthetic process","type":"narrow"},{"name":"up regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"up regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"up regulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"up regulation of xanthone-containing compound formation","type":"exact"},{"name":"up regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"up-regulation of xanthone biosynthesis","type":"narrow"},{"name":"up-regulation of xanthone biosynthetic process","type":"narrow"},{"name":"up-regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"up-regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"up-regulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"up-regulation of xanthone-containing compound formation","type":"exact"},{"name":"up-regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"upregulation of xanthone biosynthesis","type":"narrow"},{"name":"upregulation of xanthone biosynthetic process","type":"narrow"},{"name":"upregulation of xanthone-containing compound anabolism","type":"exact"},{"name":"upregulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"upregulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"upregulation of xanthone-containing compound formation","type":"exact"},{"name":"upregulation of xanthone-containing compound synthesis","type":"exact"}],"termid":"GO:1900185"}


id: GO:0042199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanuric acid, a suspected gastrointestinal or liver toxicant, and a potential degradation product of triazine herbicides, such as atrazine and simazine. It is widely used for the stabilization of available chlorine in swimming pool water and is also the starting compound for the synthesis of many organic derivatives.","definition_xrefs":["UM-BBD_pathwayID:cya"],"direct_ancestors":[{"relation_name":"is_a","term_name":"s-triazine compound metabolic process","termid":"GO:0018965"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanuric acid metabolic process","synonyms":[{"name":"cyanuric acid metabolism","type":"exact"}],"termid":"GO:0042199"}


id: GO:2000379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of reactive oxygen species metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of reactive oxygen species metabolic process","termid":"GO:2000377"},{"relation_name":"positively_regulates","term_name":"reactive oxygen species metabolic process","termid":"GO:0072593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of reactive oxygen species metabolic process","synonyms":[{"name":"positive regulation of ROS metabolic process","type":"exact"},{"name":"positive regulation of reactive oxygen species metabolism","type":"exact"}],"termid":"GO:2000379"}


id: PBO:0080250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 13 pseudogene","termid":"PBO:0080250"}


id: GO:0005606
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-1 complex","synonyms":[{"name":"laminin-111 complex","type":"exact"}],"termid":"GO:0005606"}


id: FYPO:0002692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to paraquat. Cells stop growing (and may die) at a concentration of paraquat that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to paraquat","synonyms":[{"name":"hypersensitive to paraquat","type":"exact"},{"name":"sensitive to paraquat during mitotic cell cycle","type":"related"},{"name":"sensitive to paraquat during vegetative growth","type":"exact"}],"termid":"FYPO:0002692"}


id: GO:0071898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of estrogen receptor binding, interacting selectively with a an estrogen receptor.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of estrogen receptor binding (obsolete GO:0071898)","termid":"GO:0071898"}


id: PBO:0064475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase gamma, catalytic subunit","termid":"PBO:0064475"}


id: PBO:0061044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 5","termid":"PBO:0061044"}


id: GO:0016240
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90731],"is_not":false,"summary":null,"term":"GO:0016240"}]},"cv_name":"biological_process","definition":"The initial attachment of an autophagosome membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane. Docking requires only that the two membranes come close enough for these proteins to interact and adhere.","definition_xrefs":["GOC:autophagy","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"},{"relation_name":"part_of","term_name":"autophagosome maturation","termid":"GO:0097352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006914","GO:0051179","GO:0140056"],"is_obsolete":false,"name":"autophagosome membrane docking","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"autophagic vacuole docking","type":"exact"}],"termid":"GO:0016240","terms_by_termid":{"GO:0016240":null}}


id: PBO:0060033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 21","termid":"PBO:0060033"}


id: PBO:0065136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent X-linked catalytic subunit","termid":"PBO:0065136"}


id: PBO:0090184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proline metabolism regulator","termid":"PBO:0090184"}


id: PBO:0070157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 71 pseudogene","termid":"PBO:0070157"}


id: PBO:0068782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 19, pseudogene","termid":"PBO:0068782"}


id: GO:0035073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The onset of prepupal development when the larval stops crawling, everts its spiracles and the larval cuticle becomes the puparium or pupal case that surrounds the organism for the duration of metamorphosis.","definition_xrefs":["ISBN:0879694238","PMID:9409683","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"prepupal development","termid":"GO:0035210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pupariation","synonyms":[{"name":"puparium biosynthesis","type":"exact"},{"name":"puparium formation","type":"exact"}],"termid":"GO:0035073"}


id: GO:0010367
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages. Isoamylases in animals are localized in the extracellular space.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoamylase complex","termid":"GO:0043033"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"extracellular isoamylase complex","termid":"GO:0010367"}


id: GO:0099189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the spectrin-associated cytoskeleton contained within the postsynapse.","definition_xrefs":["GOC:dos","PMID:28576936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spectrin-associated cytoskeleton","termid":"GO:0014731"},{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton","termid":"GO:0099571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic spectrin-associated cytoskeleton","termid":"GO:0099189"}


id: SO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the three_prime_coding_exon that codes for protein.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_region_of_exon","termid":"SO:0001215"},{"relation_name":"part_of","term_name":"three_prime_coding_exon","termid":"SO:0000202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon_coding_region","synonyms":[{"name":"three prime exon coding region","type":"exact"}],"termid":"SO:0000197"}


id: PBO:0043529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cordon-bleu WH2 repeat protein","termid":"PBO:0043529"}


id: GO:0034026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + an L-amino acid + an L-amino acid = ADP + phosphate + L-aminoacyl-L-amino acid.","definition_xrefs":["EC:6.3.2.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-amino-acid alpha-ligase activity","secondary_identifiers":["RHEA:44332","MetaCyc:RXN-16296"],"synonyms":[{"name":"L-amino acid alpha-ligase activity","type":"exact"},{"name":"L-amino acid ligase activity","type":"exact"},{"name":"YwfE","type":"related"},{"name":"bacilysin synthetase activity","type":"exact"}],"termid":"GO:0034026"}


id: GO:0004551
data:
  {"annotated_genes":["SJAG_03091","SJAG_00705"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107929],"is_not":false,"summary":null,"term":"GO:0004551"},{"annotations":[101194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000210"},{"annotations":[101195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035529"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides.","definition_xrefs":["PMID:2848456","PMID:4405504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00705":null,"SJAG_03091":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"dinucleotide phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-196955"],"synonyms":[{"name":"dinucleotide nucleotidohydrolase activity","type":"related"},{"name":"nucleotide diphosphatase activity","type":"broad"},{"name":"nucleotide pyrophosphatase activity","type":"exact"}],"termid":"GO:0004551","terms_by_termid":{"GO:0000210":null,"GO:0004551":null,"GO:0035529":null}}


id: GO:0042792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of ribosomal RNA (rRNA) from a mitochondrial DNA template.","definition_xrefs":["GOC:jl","PMID:23632312"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial rRNA transcription (obsolete GO:0042792)","synonyms":[{"name":"rRNA transcription from mitochondrial promoter","type":"exact"}],"termid":"GO:0042792"}


id: GO:0060944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of neural crest cells to a cardiac fibroblast fate and their capacity to differentiate into cardiac fibroblast cells. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell fate commitment","termid":"GO:0060937"},{"relation_name":"part_of","term_name":"neural crest-derived cardiac fibroblast cell differentiation","termid":"GO:0060942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest-derived cardiac fibroblast cell fate commitment","termid":"GO:0060944"}


id: GO:0000815
data:
  {"annotated_genes":["SJAG_04489","SJAG_05207","SJAG_00900","SJAG_00416","SJAG_01242","SJAG_03783"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84088,94064,96987,99238,99827,102644],"is_not":false,"summary":null,"term":"GO:0000815"}]},"cv_name":"cellular_component","definition":"A complex with membrane scission activity that plays a major role in many processes where membranes are remodelled - including endosomal transport (vesicle budding), nuclear envelope organisation (membrane closure, mitotic bridge cleavage), and cytokinesis (abscission).","definition_xrefs":["PMID:34449766","PMID:31132588","PMID:22361144","PMID:32243490","PMID:17556548","PMID:28242692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex","termid":"GO:0036452"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00900":null,"SJAG_01242":null,"SJAG_03783":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005768","GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"ESCRT III complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32243490":null},"synonyms":[{"name":"endosomal sorting complex required for transport","type":"broad"}],"termid":"GO:0000815","terms_by_termid":{"GO:0000815":null}}


id: PBO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, poly(A)-bearing RNA (predicted)","termid":"PBO:0000102"}


id: PBO:0027971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sulfite_reductase_activity","termid":"PBO:0027971"}


id: GO:0030289
data:
  {"annotated_genes":["SJAG_00369","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102665,103496],"is_not":false,"summary":null,"term":"GO:0030289"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex formed by the catalytic subunit of protein phosphatase 4 plus one or more regulatory subunits.","definition_xrefs":["PMID:10026142","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein phosphatase 4 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030289","terms_by_termid":{"GO:0030289":null}}


id: PBO:0082827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved protein involved in autophagy; interacts with Atg12p-Atg5p conjugates to form Atg12p-Atg5p-Atg16p multimers, which binds to membranes and localizes to the pre-autophagosomal structure and are required for autophagy; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0082827"}


id: PBO:0056654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 21","termid":"PBO:0056654"}


id: FYPO:0002600
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115426,115427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[115419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone modification is normal. All histone modification may be assayed, or modification of specific sites on specific histones may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03118","SJAG_03689"],"name":"normal histone modification during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal histone modification during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002600","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: PBO:0056266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastermind like transcriptional coactivator 2","termid":"PBO:0056266"}


id: GO:0052412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving pectin in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall pectin (obsolete GO:0052412)","termid":"GO:0052412"}


id: PBO:0004891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA export factor, nucleoporin Rae1","termid":"PBO:0004891"}


id: PBO:0034532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_break-induced_loss_of_heterozygosity","termid":"PBO:0034532"}


id: GO:0018942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organometals, any metal-containing organic compound, especially one in which the metal atom is linked directly to one of more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organometal metabolic process","synonyms":[{"name":"organometal metabolism","type":"exact"}],"termid":"GO:0018942"}


id: PBO:0078370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 14-1","termid":"PBO:0078370"}


id: PBO:0025448
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-Acetylglutamate Synthetase deficiency","termid":"PBO:0025448"}


id: GO:0090220
data:
  {"annotated_genes":["SJAG_03287","SJAG_05260","SJAG_05226","SJAG_01777","SJAG_03685","SJAG_01538","SJAG_03092","SJAG_00756","SJAG_03680","SJAG_05196","SJAG_01263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102030,85885],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[98919,85886,83537,101181,96015],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[112031,102031,113628,113764,83538,92824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[102032,110084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"}]},"cv_name":"biological_process","definition":"The directed movement of a chromosome to the nuclear envelope that contributes to homologous chromosome segregation and precedes synapsis.","definition_xrefs":["GOC:ascb_2009","GOC:tb","PMID:19913287","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of chromosome localization","termid":"GO:0051303"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00756":null,"SJAG_01263":null,"SJAG_01538":null,"SJAG_01777":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_05196":null,"SJAG_05226":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"chromosome localization to nuclear envelope involved in homologous chromosome segregation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome localisation to nuclear envelope involved in homologous chromosome segregation","type":"exact"}],"termid":"GO:0090220","terms_by_termid":{"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0070197":null}}


id: PBO:0073276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 10 pseudogene 1","termid":"PBO:0073276"}


id: GO:0007634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism pertaining to movement of the eyes and of objects in the visual field, as in nystagmus.","definition_xrefs":["GOC:pr","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual behavior","termid":"GO:0007632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optokinetic behavior","synonyms":[{"name":"optokinetic behaviour","type":"exact"}],"termid":"GO:0007634"}


id: PBO:0071876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 14","termid":"PBO:0071876"}


id: GO:0035532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of chemokine (C-C motif) ligand 6 (CCL6).","definition_xrefs":["GOC:add","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 6 production","termid":"GO:0035531"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-C motif) ligand 6 production","termid":"GO:0035530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of chemokine (C-C motif) ligand 6 production","secondary_identifiers":["GO:0035536"],"synonyms":[{"name":"negative regulation of CCL6 production","type":"exact"},{"name":"negative regulation of chemokine (C-C motif) ligand 6 secretion","type":"narrow"}],"termid":"GO:0035532"}


id: GO:0048237
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the rough endoplasmic reticulum.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum","termid":"GO:0005791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"rough endoplasmic reticulum lumen","secondary_identifiers":["NIF_Subcellular:sao1819509473"],"synonyms":[{"name":"RER lumen","type":"exact"},{"name":"rough ER lumen","type":"exact"}],"termid":"GO:0048237"}


id: PBO:0088469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex bromodomain subunit Rsc4","termid":"PBO:0088469"}


id: PR:Q9HDW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDW6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.05","synonyms":[{"name":"Spom972h-vma5","type":"exact"},{"name":"V-ATPase subunit C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDW6"}


id: PR:Q10212
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein MEMO1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01586","PANTHER:PTHR11060:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 family protein C4H3.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.04c","secondary_identifiers":["UniProtKB:Q10212"],"synonyms":[{"name":"Spom972h-MEMO1","type":"exact"}],"termid":"PR:Q10212"}


id: PBO:0057130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 214","termid":"PBO:0057130"}


id: GO:1900466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of arginine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","GOC:TermGenie","PMID:19233144","PMID:8455631"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900466)","synonyms":[{"name":"activation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900466"}


id: GO:0140560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: UDP-alpha-D-xylose + [protein with EGF-like domain]-3-O-(alpha-D-xylosyl-(1->3)-beta-D-glucosyl)-L-serine = UDP + [protein with EGF-like domain]-3-O-(alpha-D-xylosyl-(1->3)-alpha-D-xylosyl-(1->3)-beta-D-glucosyl)-L-serine. The enzyme, found in animals and insects, is involved in the biosynthesis of the alpha-D-xylosyl-(1->3)-alpha-D-xylosyl-(1->3)- beta-D-glucosyl trisaccharide on epidermal growth factor-like (EGF- like) domains.","definition_xrefs":["PMID:22117070","RHEA:22820","PMID:8982869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"xylosyl alpha-1,3-xylosyltransferase activity","secondary_identifiers":["EC:2.4.2.62"],"termid":"GO:0140560"}


id: GO:0035052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of dorsal vessel cardioblast cells to an aortic cell fate and their capacity to differentiate into aortic cells. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["PMID:12397110","GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"embryonic heart tube anterior/posterior pattern specification","termid":"GO:0035054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal vessel aortic cell fate commitment","termid":"GO:0035052"}


id: FYECO:0000290
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which carbendazim was added to the experimental medium.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ carbendazim","synonyms":[{"name":"MBC added","type":"exact"},{"name":"mecarzole added","type":"exact"},{"name":"CBZ added","type":"exact"}],"termid":"FYECO:0000290"}


id: GO:0044344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an fibroblast growth factor stimulus.","definition_xrefs":["GOC:yaf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to fibroblast growth factor","termid":"GO:0071774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fibroblast growth factor stimulus","synonyms":[{"name":"cellular response to FGF stimulus","type":"exact"}],"termid":"GO:0044344"}


id: FYPO:0002335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is normal (i.e. indistinguishable from wild type). Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin or CENP-A-containing chromatin (the latter is found at the centromere central core).","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal chromatin silencing","synonyms":[{"name":"normal chromatin silencing during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing during vegetative growth","type":"exact"}],"termid":"FYPO:0002335"}


id: PBO:0003475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop8 (predicted)","termid":"PBO:0003475"}


id: PBO:0075356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOWAHC pseudogene 4","termid":"PBO:0075356"}


id: PBO:0064685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 21","termid":"PBO:0064685"}


id: GO:0090007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic anaphase, a cell cycle process comprising the steps by which a cell progresses through anaphase, the stage of mitosis during which the two sets of chromosomes separate and move away from each other.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic anaphase (obsolete GO:0090007)","synonyms":[{"name":"regulation of mitotic anaphase","type":"exact"}],"termid":"GO:0090007"}


id: PBO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Par2","termid":"PBO:0000915"}


id: GO:0031729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR4 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CCR4 chemokine receptor binding","synonyms":[{"name":"CCR4 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031729"}


id: PBO:0045654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 12","termid":"PBO:0045654"}


id: GO:0097511
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A branched cellular projection (or cytoplasmic extension) that is extended from the surface of a dendritic immune cell, and which enables the cell to sample luminal pathogens and increase the surface area for antigen presentation to T cells.","definition_xrefs":["GOC:cjm","GOC:BHF","CL:0000451","PMID:12200351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic cell dendrite","termid":"GO:0097511"}


id: PBO:0026987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_potassium_ionophore","termid":"PBO:0026987"}


id: GO:0021584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the pons. This process pertains to the initial formation of a structure from unspecified parts. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GO_REF:0000021","GOC:dph","ISBN:0838580343","GOC:dgh","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"hindbrain formation","termid":"GO:0021576"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons formation","termid":"GO:0021584"}


id: PBO:0064402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic lipase pseudogene 1","termid":"PBO:0064402"}


id: GO:0030377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the urokinase plasminogen activator to initiate a change in cell activity.","definition_xrefs":["PMID:16456079","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"urokinase plasminogen activator receptor activity","secondary_identifiers":["Wikipedia:Urokinase_receptor"],"synonyms":[{"name":"U-plasminogen activator receptor activity","type":"exact"},{"name":"uPAR","type":"exact"},{"name":"urokinase plasminogen activator receptor","type":"exact"}],"termid":"GO:0030377"}


id: PBO:0039536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 36B","termid":"PBO:0039536"}


id: PBO:0089243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated WD repeat protein Nan1/Utp17","termid":"PBO:0089243"}


id: FYECO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which lysine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ lys","synonyms":[{"name":"lysine added","type":"exact"}],"termid":"FYECO:0000199"}


id: GO:0034937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: perchlorate + 2 H+ + 2 e- = chlorate + H2O.","definition_xrefs":["UM-BBD_reactionID:r0980"],"gene_count":0,"genotype_count":0,"name":"obsolete perchlorate reductase activity (obsolete GO:0034937)","termid":"GO:0034937"}


id: PBO:0005722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc34 (predicted)","termid":"PBO:0005722"}


id: GO:0052468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of salicylic acid in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of salicylic acid levels in symbiont (obsolete GO:0052468)","synonyms":[{"name":"modulation by organism of salicylic acid levels in symbiont","type":"exact"}],"termid":"GO:0052468"}


id: PR:Q9HGP0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mbx2 gene.","definition_xrefs":["UniProtKB:Q9HGP0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor pvg4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC317.01","synonyms":[{"name":"MADS-box transcription factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PvGal synthesis protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mbx2","type":"exact"},{"name":"pyruvylated Gal-beta-1,3-epitope synthesis protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGP0"}


id: PR:P0CT70
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02975","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L2-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.13c","secondary_identifiers":["UniProtKB:P0CT70"],"synonyms":[{"name":"K37 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"K5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"KD4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RPL8","type":"exact"}],"termid":"PR:P0CT70"}


id: PBO:0090073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Alm1","termid":"PBO:0090073"}


id: GO:0060023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the soft palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The soft palate is the posterior portion of the palate extending from the posterior edge of the hard palate.","definition_xrefs":["ISBN:0721662544","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"secondary palate development","termid":"GO:0062009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"soft palate development","synonyms":[{"name":"palatum molle development","type":"exact"},{"name":"velum palatum development","type":"exact"}],"termid":"GO:0060023"}


id: GO:0075259
data:
  {"annotated_genes":["SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114289],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075319"}]},"cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spore-bearing structure over time, from its formation to the mature structure. A spore-bearing structure is an anatomical structure that produces new spores.","definition_xrefs":["GOC:pamgo_curators","GOC:di","GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03501":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore-bearing structure development","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fruiting structure development","type":"exact"},{"name":"sporangium development","type":"broad"},{"name":"spore-bearing organ development","type":"related"},{"name":"sporophore development","type":"exact"}],"termid":"GO:0075259","terms_by_termid":{"GO:0075319":null}}


id: GO:0019172
data:
  {"annotated_genes":["SJAG_02988","SJAG_04404","SJAG_04674","SJAG_02106"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84110,88540,89218,89219,108905],"is_not":false,"summary":null,"term":"GO:0019172"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: methylglyoxal + H2O = D-lactate.","definition_xrefs":["RHEA:27754","PMID:21696459","PMID:7848303","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02106":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"glyoxalase III activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLYOXIII-RXN","EC:4.2.1.130"],"synonyms":[{"name":"(R)-lactate hydro-lyase","type":"exact"},{"name":"D-lactate dehydratase","type":"exact"},{"name":"glutathione-independent glyoxalase activity","type":"related"}],"termid":"GO:0019172","terms_by_termid":{"GO:0019172":null}}


id: PBO:0085648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in membrane-trafficking events at plasma membrane; interacts with actin regulators Sla1p and Las17p, ubiquitin, Arf3p to couple actin dynamics to membrane trafficking processes; similar structure to GGA family of proteins with N-terminal VHS domain and GAT domain; binds Las17p, which is homolog of human Wiskott-Aldrich Syndrome protein involved in actin patch assembly, actin polymerization; may mediate disassembly of Pan1 complex from endocytic coat","termid":"PBO:0085648"}


id: GO:0140926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-kynurenine from one side of a membrane to the other.","definition_xrefs":["PMID:35245456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-kynurenine transmembrane transporter activity","termid":"GO:0140926"}


id: PBO:0001272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase (predicted)","termid":"PBO:0001272"}


id: PBO:0029276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_origin_recognition_complex_assembly","termid":"PBO:0029276"}


id: PBO:0074089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 5","termid":"PBO:0074089"}


id: GO:1904262
data:
  {"annotated_genes":["SJAG_01184","SJAG_00991","SJAG_03355","SJAG_02765","SJAG_00875","SJAG_03678","SJAG_03072","SJAG_00457","SJAG_04910","SJAG_04249","SJAG_03089","SJAG_03720","SJAG_01983","SJAG_02231","SJAG_00824","SJAG_03501","SJAG_03486","SJAG_01142","SJAG_03799","SJAG_00169","SJAG_05346","SJAG_00209"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84157,89420,90276,92204,94975,95669,97547,99108,101209,103239,103491,105356,105769,107047,109257,110077,110665,112220,112326,112576,113126,114288],"is_not":false,"summary":null,"term":"GO:1904262"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of TORC1 signaling.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25366275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of TOR signaling","termid":"GO:0032007"},{"relation_name":"is_a","term_name":"regulation of TORC1 signaling","termid":"GO:1903432"},{"relation_name":"negatively_regulates","term_name":"TORC1 signaling","termid":"GO:0038202"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03720":null,"SJAG_03799":null,"SJAG_04249":null,"SJAG_04910":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of TORC1 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of TORC1 signal transduction","type":"exact"},{"name":"down regulation of TORC1 signaling","type":"exact"},{"name":"down-regulation of TORC1 signal transduction","type":"exact"},{"name":"down-regulation of TORC1 signaling","type":"exact"},{"name":"downregulation of TORC1 signal transduction","type":"exact"},{"name":"downregulation of TORC1 signaling","type":"exact"},{"name":"inhibition of TORC1 signal transduction","type":"narrow"},{"name":"inhibition of TORC1 signaling","type":"narrow"},{"name":"negative regulation of TORC1 signal transduction","type":"exact"}],"termid":"GO:1904262","terms_by_termid":{"GO:1904262":null}}


id: PBO:0039504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 26 pseudogene 2","termid":"PBO:0039504"}


id: GO:1901950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement a dense core granule within a cell.","definition_xrefs":["PMID:23358451","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"},{"relation_name":"is_a","term_name":"dense core granule localization","termid":"GO:0032253"},{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"dense core granule transport","synonyms":[{"name":"dense core vesicle transport","type":"exact"}],"termid":"GO:1901950"}


id: PBO:0064832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 10","termid":"PBO:0064832"}


id: PBO:0053125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand dependent nuclear receptor corepressor like","termid":"PBO:0053125"}


id: GO:0043545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdopterin cofactor metabolic process","synonyms":[{"name":"Moco metabolic process","type":"exact"},{"name":"Moco metabolism","type":"exact"},{"name":"molybdopterin cofactor metabolism","type":"exact"}],"termid":"GO:0043545"}


id: PBO:0061772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorant binding protein 2B","termid":"PBO:0061772"}


id: GO:1990682
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of a macrophage colony-stimulating factor (CSF1, also called M-CSF) dimer bound to a dimerized receptor (CSF1R, also called FMS). Receptor dimerization requires the presence of the ligand.","definition_xrefs":["GOC:bf","GOC:BHF","GOC:nc","PMID:19017797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CSF1-CSF1R complex","synonyms":[{"name":"CSF1:C-FMS complex","type":"exact"},{"name":"M-CSF:C-FMS complex","type":"related"},{"name":"M-CSF:CSF1R complex","type":"related"},{"name":"M-CSF:FMS complex","type":"exact"},{"name":"macrophage colony-stimulating factor:receptor complex","type":"exact"}],"termid":"GO:1990682"}


id: PBO:0068575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 26, pseudogene","termid":"PBO:0068575"}


id: PBO:0063644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 1","termid":"PBO:0063644"}


id: GO:0038109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of stem cell factor to the tyrosine kinase receptor KIT on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription. Stem cell factor (KIT ligand) binding to the receptor Kit mediates receptor dimerization, activation of its intrinsic tyrosine kinase activity and autophosphorylation. The activated receptor then phosphorylates various substrates, thereby activating distinct signaling cascades within the cell that trigger a change in state or activity of the cell.","definition_xrefs":["PMID:16129412","GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to stem cell factor stimulus","termid":"GO:0036216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Kit signaling pathway","synonyms":[{"name":"Kit signalling pathway","type":"exact"},{"name":"SCF signaling pathway","type":"exact"},{"name":"stem cell factor receptor signaling pathway","type":"exact"},{"name":"stem cell factor signaling pathway","type":"exact"}],"termid":"GO:0038109"}


id: PR:Q92351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein pcp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.06c","synonyms":[{"name":"Spom972h-pcp1","type":"exact"}],"termid":"PR:Q92351"}


id: FYPO:0001822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which one or more of the mating cassettes is duplicated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"mating cassette duplication","termid":"FYPO:0001822"}


id: GO:0060896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the creation of defined areas or spaces within the neural plate to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate pattern specification","termid":"GO:0060896"}


id: PBO:0075079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 129","termid":"PBO:0075079"}


id: PBO:0066546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 9 binding protein","termid":"PBO:0066546"}


id: PBO:0039992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 6","termid":"PBO:0039992"}


id: GO:0047736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cellobiose = D-glucosyl-D-mannose.","definition_xrefs":["MetaCyc:CELLOBIOSE-EPIMERASE-RXN","EC:5.1.3.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"cellobiose epimerase activity","secondary_identifiers":["RHEA:23384"],"synonyms":[{"name":"cellobiose 2-epimerase activity","type":"related"}],"termid":"GO:0047736"}


id: GO:0042398
data:
  {"annotated_genes":["SJAG_00988","SJAG_03494","SJAG_03224","SJAG_00832","SJAG_01126","SJAG_00815","SJAG_01351","SJAG_03679","SJAG_03856","SJAG_04156","SJAG_00529","SJAG_04481","SJAG_01198","SJAG_02225","SJAG_01233","SJAG_01616","SJAG_02599","SJAG_02408","SJAG_03275","SJAG_00043","SJAG_03632","SJAG_05200","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108506,104437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[67733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[61241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140479"},{"annotations":[99729,107625,107626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[108507,109774,100871,102162,86417,101019,104438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[100676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009396"},{"annotations":[114238,93124,89399,104523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[99730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052707"},{"annotations":[98852,85020,109467,94839,94835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[110767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006659"},{"annotations":[99731,107627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"},{"annotations":[101020,86419,109775,102163,110152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[89029,100836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of compounds derived from amino acids, organic acids containing one or more amino substituents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00106":null,"SJAG_00529":null,"SJAG_00815":null,"SJAG_00832":null,"SJAG_00988":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01233":null,"SJAG_01351":null,"SJAG_01616":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_02599":null,"SJAG_03224":null,"SJAG_03275":null,"SJAG_03494":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_03856":null,"SJAG_04156":null,"SJAG_04481":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular modified amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"amino acid derivative biosynthetic process","type":"exact"},{"name":"cellular amino acid derivative anabolism","type":"exact"},{"name":"cellular amino acid derivative biosynthesis","type":"exact"},{"name":"cellular amino acid derivative biosynthetic process","type":"exact"},{"name":"cellular amino acid derivative formation","type":"exact"},{"name":"cellular amino acid derivative synthesis","type":"exact"},{"name":"cellular modified amino acid anabolism","type":"exact"},{"name":"cellular modified amino acid biosynthesis","type":"exact"},{"name":"cellular modified amino acid formation","type":"exact"},{"name":"cellular modified amino acid synthesis","type":"exact"}],"termid":"GO:0042398","terms_by_termid":{"GO:0006659":null,"GO:0006750":null,"GO:0006761":null,"GO:0009257":null,"GO:0009396":null,"GO:0015940":null,"GO:0046654":null,"GO:0046656":null,"GO:0046901":null,"GO:0052699":null,"GO:0052707":null,"GO:0140479":null,"GO:1903257":null}}


id: PBO:0042452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 5","termid":"PBO:0042452"}


id: PBO:0082832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved zinc-finger domain protein involved in pre-mRNA splicing; critical for splicing of nearly all intron-containing genes; required for assembly of U4 snRNA into the U4/U6 particle","termid":"PBO:0082832"}


id: PBO:0082746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; non-essential gene required for regulation of ribosomal protein genes and the cell wall/stress response; null mutants are osmosensitive; RSC30 has a paralog, RSC3, that arose from the whole genome duplication","termid":"PBO:0082746"}


id: MOD:01546
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent N'-derivatized histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01546"}


id: PBO:0087490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cytochrome C oxidase complex; stabilizes or regulates formation of respiratory chain supercomplexes composed of Complex III (ubiquinol-cytochrome c reductase) and Complex IV (cytochrome c oxidase)","termid":"PBO:0087490"}


id: PBO:0052273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 5A","termid":"PBO:0052273"}


id: _global:involved_in_negative_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in regulation of p if c is involved in some p' and p' negatively regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"_global:involved_in_regulation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_negative_regulation_of","secondary_identifiers":["RO:0002430"],"termid":"_global:involved_in_negative_regulation_of"}


id: PBO:0074953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-4","termid":"PBO:0074953"}


id: PBO:0074658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 48","termid":"PBO:0074658"}


id: PBO:0090706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (CK1 family) Hhp1","termid":"PBO:0090706"}


id: PATO:0001111
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001111 relative density value (obsolete PATO:0001111)","termid":"PATO:0001111"}


id: GO:0070137
data:
  {"annotated_genes":["SJAG_16454","SJAG_02214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86386,102212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds between an alpha-carboxyl group and an alpha-amino group within a small protein such as ubiquitin or a ubiquitin-like protein (e.g. APG8, ISG15, NEDD8, SUMO).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"},{"relation_name":"is_a","term_name":"ubiquitin-like protein peptidase activity","termid":"GO:0019783"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02214":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016787","GO:0140096","GO:0003824","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"ubiquitin-like protein-specific endopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"small conjugating protein-specific endopeptidase activity","type":"exact"}],"termid":"GO:0070137","terms_by_termid":{"GO:0070139":null}}


id: PBO:0056618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MECOM antisense RNA 1","termid":"PBO:0056618"}


id: FYECO:0000072
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium where glycerol is the main carbon source, but the medium also contained trace amounts of glucose (<0.1%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol MM with trace glucose","synonyms":[{"name":"glycerol main carbon source + very low glucose MM","type":"exact"},{"name":"glycerol minimal medium with trace glucose","type":"exact"}],"termid":"FYECO:0000072"}


id: GO:0141185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular adaptor recognizes and binds a target protein containing a UFM1 modification and brings the target protein into contact with another protein to allow those proteins to function in a coordinated way.","definition_xrefs":["PMID:36848233","PMID:38383785","PMID:38383789","PMID:32537488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein reader activity","termid":"GO:0140035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"UFM1-modified protein reader activity","synonyms":[{"name":"UFM1 modified protein reader activity","type":"exact"},{"name":"UFM1-dependent protein binding","type":"exact"}],"termid":"GO:0141185"}


id: PBO:0077707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNNI3 interacting kinase","termid":"PBO:0077707"}


id: PBO:0069413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 674, pseudogene","termid":"PBO:0069413"}


id: GO:0039615
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=1 symmetry. The T=1 capsid is composed of 12 pentameric capsomeres.","definition_xrefs":["VZ:1057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=1 icosahedral viral capsid","termid":"GO:0039615"}


id: PBO:0074951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-2","termid":"PBO:0074951"}


id: GO:0030814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP metabolic process (obsolete GO:0030814)","synonyms":[{"name":"regulation of 3',5' cAMP metabolic process","type":"exact"},{"name":"regulation of 3',5' cAMP metabolism","type":"exact"},{"name":"regulation of 3',5'-cAMP metabolic process","type":"exact"},{"name":"regulation of 3',5'-cAMP metabolism","type":"exact"},{"name":"regulation of adenosine 3',5'-cyclophosphate metabolic process","type":"exact"},{"name":"regulation of adenosine 3',5'-cyclophosphate metabolism","type":"exact"},{"name":"regulation of cAMP metabolism","type":"exact"},{"name":"regulation of cyclic AMP metabolic process","type":"exact"},{"name":"regulation of cyclic AMP metabolism","type":"exact"}],"termid":"GO:0030814"}


id: GO:1990086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a lens fiber cell. Lens fiber cells are elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["PMID:11095619","CL:0011004","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell apoptotic process","termid":"GO:1990086"}


id: GO:0070568
data:
  {"annotated_genes":["SJAG_01724","SJAG_03188","SJAG_00890","SJAG_04233"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112177,99185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004475"},{"annotations":[104314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004484"},{"annotations":[113873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008193"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a guanylyl group to an acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00890":null,"SJAG_01724":null,"SJAG_03188":null,"SJAG_04233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"guanylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070568","terms_by_termid":{"GO:0004475":null,"GO:0004484":null,"GO:0008193":null}}


id: FYPO:0005175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of catalase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal catalase activity","termid":"FYPO:0001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased catalase activity","termid":"FYPO:0005175"}


id: PBO:0091275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartyl/glutamyl-tRNA amidotransferase subunit B-related Aim41","termid":"PBO:0091275"}


id: GO:1902206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-2-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:11909529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-2-mediated signaling pathway","termid":"GO:1902205"},{"relation_name":"negatively_regulates","term_name":"interleukin-2-mediated signaling pathway","termid":"GO:0038110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-2-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-2-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-2-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-2-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:1902206"}


id: GO:0018258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of proteins via 04 atom of hydroxyproline to form O4-glycosyl-L-hydroxyproline; the most common form is arabinofuranosyl-4-proline.","definition_xrefs":["RESID:AA0212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein O-linked glycosylation via hydroxyproline","synonyms":[{"name":"protein amino acid O-linked glycosylation via hydroxyproline","type":"exact"}],"termid":"GO:0018258"}


id: PBO:0041373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 47","termid":"PBO:0041373"}


id: GO:0106394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"},{"relation_name":"negatively_regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of palmitic acid catabolic process","termid":"GO:0106394"}


id: PBO:0043242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 2","termid":"PBO:0043242"}


id: GO:0031371
data:
  {"annotated_genes":["SJAG_00320","SJAG_02319","SJAG_03006","SJAG_00293"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89482,112301,114896,87335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033503"}]},"cv_name":"cellular_component","definition":"Any complex that possesses ubiquitin conjugating enzyme activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00320":null,"SJAG_02319":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ubiquitin conjugating enzyme complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"E2 complex","type":"related"}],"termid":"GO:0031371","terms_by_termid":{"GO:0033503":null}}


id: GO:0180034
data:
  {"annotated_genes":["SJAG_01713"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103790],"is_not":false,"summary":null,"term":"GO:0180034"}]},"cv_name":"biological_process","definition":"Any process involved in transcription termination-coupled 3' processing of RNA polymerase II lncRNA transcripts by the 3' end cleavage and addition of a poly(A) tail.","definition_xrefs":["PMID:31276588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway","termid":"GO:0180012"},{"relation_name":"is_a","term_name":"lncRNA processing","termid":"GO:0180035"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"co-transcriptional lncRNA 3' end processing, cleavage and polyadenylation pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lncRNA 3' end processing","type":"broad"},{"name":"lncRNA 3'-end processing","type":"broad"}],"termid":"GO:0180034","terms_by_termid":{"GO:0180034":null}}


id: PBO:0091172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex Dpy-30 domain subunit Sdc1","termid":"PBO:0091172"}


id: PBO:0031102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_salt_stress","termid":"PBO:0031102"}


id: GO:0021932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radially directed movement of a cell along radial glial cells in the hindbrain. Radial migration refers to a directed movement from the internal ventricular area to the outer surface of the hindbrain.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain radial glia guided cell migration","termid":"GO:0021932"}


id: GO:0072682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of an eosinophil from the blood vessels into the surrounding tissue.","definition_xrefs":["CL:0000771","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular extravasation","termid":"GO:0045123"},{"relation_name":"is_a","term_name":"eosinophil migration","termid":"GO:0072677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil extravasation","termid":"GO:0072682"}


id: PBO:0048324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 35","termid":"PBO:0048324"}


id: PBO:0060401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-6 adenine-specific DNA methyltransferase 1","termid":"PBO:0060401"}


id: GO:0043633
data:
  {"annotated_genes":["SJAG_16455","SJAG_01176","SJAG_03984","SJAG_01431"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97137],"is_not":false,"summary":null,"term":"GO:0043633"},{"annotations":[109364,84510,95711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043634"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an RNA molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3'-end of the target RNA.","definition_xrefs":["GOC:dgf","GOC:krc","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"modification-dependent macromolecule catabolic process","termid":"GO:0043632"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_01431":null,"SJAG_03984":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyadenylation-dependent RNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043633","terms_by_termid":{"GO:0043633":null,"GO:0043634":null}}


id: PBO:0068186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 493","termid":"PBO:0068186"}


id: PR:000027589
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2, initiator methionine removed unphosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136.","definition_xrefs":["PomBase:MAH","PMID:20929775","PMID:11242054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed unphosphorylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/PhosRes-","type":"exact"}],"termid":"PR:000027589"}


id: PR:P36590
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymidylate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05042","PANTHER:PTHR10344:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.07c","secondary_identifiers":["UniProtKB:P36590"],"synonyms":[{"name":"Spom972h-DTYMK","type":"exact"},{"name":"dTMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36590"}


id: PBO:0043897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 1 pseudogene 4","termid":"PBO:0043897"}


id: PBO:0076217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 and UNC84 domain containing 5","termid":"PBO:0076217"}


id: GO:0044291
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Extended zone of intimate apposition between two cells containing one or more types of intercellular junctions, e.g., the intercalated disk of muscle.","definition_xrefs":["NIF_Subcellular:sao1299635018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell-cell contact zone","synonyms":[{"name":"cell cell contact zone","type":"exact"}],"termid":"GO:0044291"}


id: PBO:0002683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF423 protein","termid":"PBO:0002683"}


id: GO:0072069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the distal convoluted tubule cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"distal convoluted tubule development","termid":"GO:0072025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DCT cell differentiation","synonyms":[{"name":"distal convoluted tubule cell differentiation","type":"exact"}],"termid":"GO:0072069"}


id: GO:0000715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The identification of lesions in DNA, such as pyrimidine-dimers, intrastrand cross-links, and bulky adducts. The wide range of substrate specificity suggests the repair complex recognizes distortions in the DNA helix.","definition_xrefs":["PMID:10197977","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"nucleotide-excision repair, DNA damage recognition","synonyms":[{"name":"pyrimidine-dimer repair, DNA damage recognition","type":"related"}],"termid":"GO:0000715"}


id: PBO:0055846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat, Ig-like and transmembrane domains 2","termid":"PBO:0055846"}


id: PR:Q9UT27
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pvg1 gene.","definition_xrefs":["UniProtKB:Q9UT27","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvyl transferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.10c","synonyms":[{"name":"PvGal synthesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pvg1","type":"exact"},{"name":"pyruvylated Gal-beta-1,3-epitope synthesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT27"}


id: GO:0001049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to RNA polymerase V core enzyme, a multisubunit eukaryotic nuclear RNA polymerase found in plants and involved in production of noncoding transcripts at target loci for silencing.","definition_xrefs":["PMID:19110459","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase V core binding","termid":"GO:0001049"}


id: PBO:0039688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC regulator of WNT signaling pathway 2","termid":"PBO:0039688"}


id: PBO:0111535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Nrg1","termid":"PBO:0111535"}


id: MOD:01759
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-130 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-130 reporter fragment","synonyms":[{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"TMT6plex","type":"related"},{"name":"cysTMT6plex-130 reporter fragment","type":"exact"}],"termid":"MOD:01759"}


id: PBO:0061920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily E member 3 (gene/pseudogene)","termid":"PBO:0061920"}


id: PBO:0108906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPCPD1 pseudogene 1","termid":"PBO:0108906"}


id: PBO:0056288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MANEAL pseudogene 1","termid":"PBO:0056288"}


id: FYPO:0004832
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase A does not occur. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase A is the stage of mitosis in which the kinetochore microtubules shorten as chromosomes move toward the spindle poles.","definition_xrefs":["GO:0000091","GO:1902967","PMID:16824200","GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle midzone during anaphase","termid":"FYPO:0004412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle midzone during anaphase A","synonyms":[{"name":"abolished protein localization to spindle midzone during mitotic anaphase A","type":"exact"},{"name":"protein absent from mitotic spindle midzone during anaphase A","type":"related"},{"name":"protein localisation to mitotic spindle midzone abolished during anaphase A","type":"exact"},{"name":"protein localization to mitotic spindle midzone abolished during anaphase A","type":"exact"},{"name":"protein localization to spindle midzone abolished during anaphase A during vegetative growth","type":"exact"}],"termid":"FYPO:0004832"}


id: PBO:0042093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC163 homolog","termid":"PBO:0042093"}


id: GO:1903677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cap-independent translational initiation.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"regulates","term_name":"cap-independent translational initiation","termid":"GO:0002190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0002181"],"is_obsolete":false,"name":"regulation of cap-independent translational initiation","termid":"GO:1903677"}


id: GO:0016838
data:
  {"annotated_genes":["SJAG_00432","SJAG_03485","SJAG_00337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003856"},{"annotations":[110184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004107"},{"annotations":[96938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004795"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a carbon-oxygen bond by elimination of a phosphate.","definition_xrefs":["EC:4.2.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00337":null,"SJAG_00432":null,"SJAG_03485":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"carbon-oxygen lyase activity, acting on phosphates","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016838","terms_by_termid":{"GO:0003856":null,"GO:0004107":null,"GO:0004795":null}}


id: GO:0038048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a dynorphin peptide, and transmitting the signal across the membrane by activating an associated G-protein. Dynorphin is any opioid peptide that is generated by cleavage of the precursor protein prodynorphin.","definition_xrefs":["GOC:bf","Wikipedia:Dynorphin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"},{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"dynorphin receptor activity","synonyms":[{"name":"kappa-opioid receptor activity","type":"related"}],"termid":"GO:0038048"}


id: GO:0055102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a lipase, an enzyme that catalyzes of the hydrolysis of a lipid.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0004857","GO:0140678","GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"lipase inhibitor activity","termid":"GO:0055102"}


id: PBO:0058336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4710","termid":"PBO:0058336"}


id: PBO:0034399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_formation_of","termid":"PBO:0034399"}


id: PBO:0045045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf like acrosomal protein 1","termid":"PBO:0045045"}


id: PBO:0034302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_disposition","termid":"PBO:0034302"}


id: PBO:0045613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 24 (pseudogene)","termid":"PBO:0045613"}


id: FYPO:0000833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"},{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein level during vegetative growth","synonyms":[{"name":"normal protein level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000833"}


id: FYPO:0002854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutamate-cysteine ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutamate-cysteine ligase activity","termid":"FYPO:0002853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished glutamate-cysteine ligase activity","synonyms":[{"name":"glutamate-cysteine ligase activity abolished","type":"exact"}],"termid":"FYPO:0002854"}


