# terms

id: GO:0016486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of a mature peptide hormone by posttranslational processing of a prohormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"signaling receptor ligand precursor processing","termid":"GO:0140448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"peptide hormone processing","termid":"GO:0016486"}


id: PATO:0002412
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and brown hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow brown","termid":"PATO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark yellow brown","termid":"PATO:0002412"}


id: GO:0045583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytotoxic T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"regulates","term_name":"cytotoxic T cell differentiation","termid":"GO:0045065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cytotoxic T cell differentiation","synonyms":[{"name":"regulation of cytotoxic T cell development","type":"related"},{"name":"regulation of cytotoxic T lymphocyte differentiation","type":"exact"},{"name":"regulation of cytotoxic T-cell differentiation","type":"exact"},{"name":"regulation of cytotoxic T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045583"}


id: PR:Q7LL15
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sus1 gene.","definition_xrefs":["UniProtKB:Q7LL15","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription and mRNA export factor sus1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.12c","synonyms":[{"name":"Spom972h-sus1","type":"exact"}],"termid":"PR:Q7LL15"}


id: FYPO:0006243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation is abnormal over short (less than 90 kb) ranges within a chromosome arm.","definition_xrefs":["PMID:28825727","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal short range intra-arm mitotic chromosome condensation during interphase (obsolete FYPO:0006243)","synonyms":[{"name":"abnormal short range intra-arm chromosome condensation during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal short range intra-arm chromosome condensation during mitotic interphase","type":"exact"},{"name":"abnormal short range intra-arm mitotic chromosome condensation during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0006243"}


id: GO:0032953
data:
  {"annotated_genes":["SJAG_04771","SJAG_04668","SJAG_04462","SJAG_04666","SJAG_01787","SJAG_00610","SJAG_03705"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060635"},{"annotations":[83651,88515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[101423,86881,98946,88501,113973,88517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan biosynthetic process","termid":"GO:0032951"},{"relation_name":"is_a","term_name":"regulation of (1->3)-beta-D-glucan metabolic process","termid":"GO:0032952"},{"relation_name":"regulates","term_name":"(1->3)-beta-D-glucan biosynthetic process","termid":"GO:0006075"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of 1,3-beta-glucan anabolism","type":"exact"},{"name":"regulation of 1,3-beta-glucan biosynthesis","type":"exact"},{"name":"regulation of 1,3-beta-glucan biosynthetic process","type":"broad"},{"name":"regulation of 1,3-beta-glucan formation","type":"exact"},{"name":"regulation of 1,3-beta-glucan synthesis","type":"exact"}],"termid":"GO:0032953","terms_by_termid":{"GO:0060635":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0088401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus2","termid":"PBO:0088401"}


id: GO:2000606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation involved in mesonephros development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"},{"relation_name":"regulates","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in mesonephros development","termid":"GO:2000606"}


id: PBO:0087750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the TIM23 translocase complex; acts to couple Tim21p with the core Tim23 translocase; provides quality control for insertion of membrane proteins by regulating their release into the inner membrane by the TIM23 complex; absolutely required for mitochondrial import of presequence-containing proteins at elevated temperature; required for viability of cells lacking the mitochondrial genome (petite-negative phenotype)","termid":"PBO:0087750"}


id: PBO:0078494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon GAT) 1-1","termid":"PBO:0078494"}


id: GO:1902901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in stress response to cadmium ion.","definition_xrefs":["GO_REF:0000060","GOC:kmv","PMID:17888400","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in stress response to cadmium ion (obsolete GO:1902901)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in response to cadmium ion stress","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in response to cadmium toxicity","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in stress response to cadmium ion","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in response to cadmium ion stress","type":"exact"},{"name":"activation of transcription from RNA polymerase II promoter involved in response to cadmium toxicity","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in stress response to cadmium ion","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in response to cadmium ion stress","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in response to cadmium toxicity","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in stress response to cadmium ion","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in response to cadmium ion stress","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in response to cadmium toxicity","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in stress response to cadmium ion","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in response to cadmium ion stress","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in response to cadmium toxicity","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in stress response to cadmium ion","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in response to cadmium ion stress","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in response to cadmium toxicity","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in response to cadmium ion stress","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in response to cadmium toxicity","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in stress response to cadmium ion","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in response to cadmium ion stress","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in response to cadmium toxicity","type":"related"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in stress response to cadmium ion","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in response to cadmium ion stress","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in response to cadmium toxicity","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in stress response to cadmium ion","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in response to cadmium ion stress","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in response to cadmium toxicity","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in stress response to cadmium ion","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in response to cadmium ion stress","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in response to cadmium toxicity","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in stress response to cadmium ion","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in response to cadmium ion stress","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in response to cadmium toxicity","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in stress response to cadmium ion","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in response to cadmium ion stress","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in response to cadmium toxicity","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in stress response to cadmium ion","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in response to cadmium ion stress","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in response to cadmium toxicity","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in stress response to cadmium ion","type":"exact"}],"termid":"GO:1902901"}


id: PBO:0060494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylneuraminate synthase","termid":"PBO:0060494"}


id: PBO:0075510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 2 pseudogene 1","termid":"PBO:0075510"}


id: PBO:0083311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF ARN2/YHL047C","termid":"PBO:0083311"}


id: PBO:0113315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in regulation of diacylglycerol lipids levels; deletion causes sensitivity to unfolded protein response-inducing agents","termid":"PBO:0113315"}


id: PBO:0069394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 654, pseudogene","termid":"PBO:0069394"}


id: GO:0042822
data:
  {"annotated_genes":["SJAG_00691","SJAG_00707","SJAG_01383","SJAG_00252","SJAG_01881","SJAG_00283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[111777,95786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[83859,63430,91601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"pyridoxal phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"active vitamin B6 metabolic process","type":"exact"},{"name":"active vitamin B6 metabolism","type":"exact"},{"name":"pyridoxal phosphate metabolism","type":"exact"}],"termid":"GO:0042822","terms_by_termid":{"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042823":null}}


id: PBO:0089836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin family glycoprotein receptor Emp46","termid":"PBO:0089836"}


id: SO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice variant that changes the 2 base pair region at the 5' end of an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site_variant","termid":"SO:0001629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"Jannovar:splice_donor_variant","type":"exact"},{"name":"Seattleseq:splice-donor","type":"exact"},{"name":"VAAST:splice_donor_variant","type":"exact"},{"name":"VEP:splice_donor_variant","type":"exact"},{"name":"snpEff:SPLICE_SITE_DONOR","type":"exact"},{"name":"splice donor variant","type":"exact"}],"termid":"SO:0001575"}


id: PBO:0071037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 39","termid":"PBO:0071037"}


id: PBO:0063128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 12","termid":"PBO:0063128"}


id: PBO:0000620
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hydroxy Urea Sensitive","termid":"PBO:0000620"}


id: PBO:0068279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNASEH1 divergent transcript","termid":"PBO:0068279"}


id: GO:0030792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + methylarsonite = S-adenosyl-L-homocysteine + dimethylarsinate.","definition_xrefs":["EC:2.1.1.138"],"gene_count":0,"genotype_count":0,"name":"obsolete methylarsonite methyltransferase activity (obsolete GO:0030792)","termid":"GO:0030792"}


id: PBO:0060017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 5","termid":"PBO:0060017"}


id: PBO:0055109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2527","termid":"PBO:0055109"}


id: GO:0019065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any receptor-mediated endocytosis that is involved in the uptake of a virus into a host cell; successive instances of virus endocytosis result in the accumulation of virus particles within the cell.","definition_xrefs":["ISBN:0781702534","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"},{"relation_name":"is_a","term_name":"endocytosis involved in viral entry into host cell","termid":"GO:0075509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"receptor-mediated endocytosis of virus by host cell","synonyms":[{"name":"receptor mediated endocytosis by host of virus particle","type":"exact"},{"name":"receptor mediated endocytosis of virus by host","type":"exact"},{"name":"receptor mediated endocytosis of virus particle by host","type":"exact"},{"name":"receptor-mediated endocytosis of virus by host","type":"exact"},{"name":"viral entry into host cell via receptor-mediated endocytosis","type":"related"},{"name":"viral receptor mediated endocytosis","type":"exact"},{"name":"virus receptor-mediated endocytosis by host","type":"exact"}],"termid":"GO:0019065"}


id: GO:0098629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a trans-Golgi network membrane.","definition_xrefs":["GOC:di","PMID:23345439","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"trans-Golgi network membrane organization","termid":"GO:0098629"}


id: GO:0006310
data:
  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id: PBO:0086606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; functions together with HAM1 to mediate resistance to 5-FU; specifically reduces the incorporation of 5-FU into RNA, without affecting uptake or incorporation of uracil into RNA; proposed to be involved in the metabolism of purine and pyrimidine base analogues; deletion mutants are sensitive to HAP and AHA","termid":"PBO:0086606"}


id: GO:0030439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK during sporulation (sensu Fungi) (obsolete GO:0030439)","synonyms":[{"name":"activation of MAPK during sporulation (sensu Fungi)","type":"exact"}],"termid":"GO:0030439"}


id: GO:0099550
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, across the synaptic cleft, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}


id: GO:0033674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphorylation","termid":"GO:0042327"},{"relation_name":"is_a","term_name":"regulation of kinase activity","termid":"GO:0043549"},{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of kinase activity","synonyms":[{"name":"kinase activator","type":"narrow"},{"name":"stimulation of kinase activity","type":"narrow"},{"name":"up regulation of kinase activity","type":"exact"},{"name":"up-regulation of kinase activity","type":"exact"},{"name":"upregulation of kinase activity","type":"exact"}],"termid":"GO:0033674"}


id: GO:0061580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a colonic epithelial cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal epithelial cell migration","termid":"GO:0061582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colon epithelial cell migration","termid":"GO:0061580"}


id: SO:0001358
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carboxyhydroxymethyl_uridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carboxyhydroxymethyl_uridine","secondary_identifiers":["RNAMOD:066"],"synonyms":[{"name":"5-(carboxyhydroxymethyl)uridine","type":"exact"},{"name":"chm5U","type":"exact"},{"name":"five carboxyhydroxymethyl uridine","type":"exact"}],"termid":"SO:0001358"}


id: PR:Q10492
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pnn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pinin homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.02","synonyms":[{"name":"Spom972h-pnn1","type":"exact"}],"termid":"PR:Q10492"}


id: PBO:0026962
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_stress_responsive_gene_mRNA_during_cellular_response_to_phosphate_starvation","termid":"PBO:0026962"}


id: PR:P56287
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translation initiation factor eIF-2B subunit epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01532","PANTHER:PTHR22572:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit epsilon (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.15c","secondary_identifiers":["UniProtKB:P56287"],"synonyms":[{"name":"Spom972h-EIF2B5","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56287"}


id: PBO:0048169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2E3 antisense RNA 1","termid":"PBO:0048169"}


id: PBO:0026813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_early_meiotic_gene_mRNA_during_meiotic_cell_cycle","termid":"PBO:0026813"}


id: PBO:0088787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit G","termid":"PBO:0088787"}


id: GO:0032631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-27 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-27 production","secondary_identifiers":["GO:0072625","GO:0045527"],"synonyms":[{"name":"IL-27 production","type":"exact"},{"name":"interleukin-27 biosynthetic process","type":"narrow"},{"name":"interleukin-27 formation","type":"narrow"},{"name":"interleukin-27 secretion","type":"narrow"},{"name":"interleukin-27 synthesis","type":"narrow"}],"termid":"GO:0032631"}


id: PBO:0008888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific HMG-box transcription factor Mc at silenced MAT3 locus","termid":"PBO:0008888"}


id: PBO:0079724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding transcription factor","termid":"PBO:0079724"}


id: PBO:0063708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 2 like 1","termid":"PBO:0063708"}


id: PBO:0062528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily U member 8","termid":"PBO:0062528"}


id: FYPO:0005045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is decreased, and sister chromatids do not move towards the spindle poles at the same time during mitosis prior to completion of chromosome segregation.","definition_xrefs":["PMID:20935472","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging mitotic chromosomes","termid":"FYPO:0000228"},{"relation_name":"has_part","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"},{"relation_name":"is_a","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0000337","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid segregation with lagging chromosomes and decreased rate of mitotic spindle elongation","synonyms":[{"name":"abnormal mitotic sister chromatid segregation with lagging chromosomes and decreased rate of mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"abnormal sister chromatid segregation with lagging chromosomes and decreased rate of spindle elongation during mitotic cell cycle","type":"related"},{"name":"lagging mitotic chromosomes with decreased rate of mitotic spindle elongation","type":"exact"},{"name":"lagging mitotic chromosomes with decreased spindle elongation rate","type":"exact"},{"name":"lagging mitotic sister chromatids, with decreased rate of mitotic spindle elongation","type":"exact"}],"termid":"FYPO:0005045"}


id: PBO:0080653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE1 pseudogene 2","termid":"PBO:0080653"}


id: PBO:0070744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 like","termid":"PBO:0070744"}


id: GO:0034289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a maltose stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to maltose","termid":"GO:0034286"},{"relation_name":"is_a","term_name":"detection of disaccharide stimulus","termid":"GO:0034288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of maltose stimulus","synonyms":[{"name":"perception of maltose stimulus","type":"related"}],"termid":"GO:0034289"}


id: GO:0106343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction glutarate + 2-oxoglutarate + O2 = (S)-2-hydroxyglutarate + succinate + CO2.","definition_xrefs":["RHEA:13821","PMID:30498244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glutarate dioxygenase activity","secondary_identifiers":["EC:1.14.11.64"],"termid":"GO:0106343"}


id: PATO:0001588
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of rate which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variability of rate","termid":"PATO:0001586"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased variability of rate","synonyms":[{"name":"low variability of rate","type":"exact"}],"termid":"PATO:0001588"}


id: GO:2001303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"},{"relation_name":"is_a","term_name":"lipoxin biosynthetic process","termid":"GO:2001301"},{"relation_name":"is_a","term_name":"lipoxin A4 metabolic process","termid":"GO:2001302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"lipoxin A4 biosynthetic process","synonyms":[{"name":"LXA4 anabolism","type":"exact"},{"name":"LXA4 biosynthesis","type":"exact"},{"name":"LXA4 biosynthetic process","type":"exact"},{"name":"LXA4 formation","type":"exact"},{"name":"LXA4 synthesis","type":"exact"},{"name":"lipoxin A4 anabolism","type":"exact"},{"name":"lipoxin A4 biosynthesis","type":"exact"},{"name":"lipoxin A4 formation","type":"exact"},{"name":"lipoxin A4 synthesis","type":"exact"}],"termid":"GO:2001303"}


id: FYPO:0008251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from cenH measured in a cell is lower than normal. cenH is a region located between mat2-P and mat3-M that is homologous to centromeric repeats, and that produces non-coding RNAs and small interfering RNAs.","definition_xrefs":["PomBase:pc","PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased cenH-derived RNA level","termid":"FYPO:0008251"}


id: FYECO:0000319
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which brefeldin A (BFA) was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ BFA","synonyms":[{"name":"+ brefeldin A","type":"exact"}],"termid":"FYECO:0000319"}


id: FYPO:0005197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation","termid":"FYPO:0002680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"increased protein phosphorylation during glucose starvation","synonyms":[{"name":"increased protein phosphorylation during glucose depletion","type":"exact"},{"name":"increased protein phosphorylation during glucose deprivation","type":"exact"}],"termid":"FYPO:0005197"}


id: PBO:0063608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylformylglycinamidine synthase","termid":"PBO:0063608"}


id: GO:1900901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heptadecane metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of heptadecane metabolic process","termid":"GO:1900899"},{"relation_name":"positively_regulates","term_name":"heptadecane metabolic process","termid":"GO:1900635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heptadecane metabolic process","synonyms":[{"name":"activation of heptadecane metabolic process","type":"narrow"},{"name":"activation of heptadecane metabolism","type":"narrow"},{"name":"positive regulation of heptadecane metabolism","type":"related"},{"name":"up regulation of heptadecane metabolic process","type":"exact"},{"name":"up regulation of heptadecane metabolism","type":"related"},{"name":"up-regulation of heptadecane metabolic process","type":"exact"},{"name":"up-regulation of heptadecane metabolism","type":"related"},{"name":"upregulation of heptadecane metabolic process","type":"exact"},{"name":"upregulation of heptadecane metabolism","type":"related"}],"termid":"GO:1900901"}


id: PBO:0031100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-centromeric_outer_repeat_transcripts_absent","termid":"PBO:0031100"}


id: PBO:0028721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_S-phase_DNA_damage_checkpoint","termid":"PBO:0028721"}


id: PBO:0055461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2894","termid":"PBO:0055461"}


id: GO:0052157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that involves recognition of a microbe-associated molecular pattern, and by which a symbiont modulates the frequency, rate or extent of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of microbe-associated molecular pattern-induced host innate immune response (obsolete GO:0052157)","synonyms":[{"name":"modulation by organism of microbe-associated molecular pattern-induced innate immune response in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of microbe-associated molecular pattern-induced host innate immunity","type":"exact"},{"name":"modulation by symbiont of pathogen-associated molecular pattern-induced host innate immunity","type":"narrow"}],"termid":"GO:0052157"}


id: PBO:0042769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 72","termid":"PBO:0042769"}


id: PR:Q10272
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00957","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein crb3/ipi3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.08c","secondary_identifiers":["UniProtKB:Q10272"],"synonyms":[{"name":"Spom972h-WDR18","type":"exact"}],"termid":"PR:Q10272"}


id: GO:0006346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Repression of transcription by methylation of DNA, leading to the formation of heterochromatin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facultative heterochromatin formation","termid":"GO:0140718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"DNA methylation-dependent heterochromatin formation","synonyms":[{"name":"DNA methylation-dependent heterochromatin assembly","type":"exact"},{"name":"methylation-dependent chromatin silencing","type":"broad"},{"name":"methylation-dependent heterochromatic silencing","type":"broad"}],"termid":"GO:0006346"}


id: GO:1905124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucosylceramidase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"},{"relation_name":"is_a","term_name":"regulation of glucosylceramidase activity","termid":"GO:1905123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glucosylceramidase activity","synonyms":[{"name":"down regulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"down regulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"down regulation of acid beta-glucosidase activity","type":"exact"},{"name":"down regulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"down regulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"down regulation of beta-glucosylceramidase activity","type":"exact"},{"name":"down regulation of ceramide glucosidase activity","type":"exact"},{"name":"down regulation of glucocerebrosidase activity","type":"exact"},{"name":"down regulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"down regulation of glucosylceramidase activity","type":"exact"},{"name":"down regulation of glucosylcerebrosidase activity","type":"exact"},{"name":"down regulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"down regulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"down regulation of psychosine hydrolase activity","type":"exact"},{"name":"down-regulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"down-regulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"down-regulation of acid beta-glucosidase activity","type":"exact"},{"name":"down-regulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"down-regulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"down-regulation of beta-glucosylceramidase activity","type":"exact"},{"name":"down-regulation of ceramide glucosidase activity","type":"exact"},{"name":"down-regulation of glucocerebrosidase activity","type":"exact"},{"name":"down-regulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"down-regulation of glucosylceramidase activity","type":"exact"},{"name":"down-regulation of glucosylcerebrosidase activity","type":"exact"},{"name":"down-regulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"down-regulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"down-regulation of psychosine hydrolase activity","type":"exact"},{"name":"downregulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"downregulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"downregulation of acid beta-glucosidase activity","type":"exact"},{"name":"downregulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"downregulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"downregulation of beta-glucosylceramidase activity","type":"exact"},{"name":"downregulation of ceramide glucosidase activity","type":"exact"},{"name":"downregulation of glucocerebrosidase activity","type":"exact"},{"name":"downregulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"downregulation of glucosylceramidase activity","type":"exact"},{"name":"downregulation of glucosylcerebrosidase activity","type":"exact"},{"name":"downregulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"downregulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"downregulation of psychosine hydrolase activity","type":"exact"},{"name":"inhibition of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"narrow"},{"name":"inhibition of GlcCer-beta-glucosidase activity","type":"narrow"},{"name":"inhibition of acid beta-glucosidase activity","type":"narrow"},{"name":"inhibition of beta-D-glucocerebrosidase activity","type":"narrow"},{"name":"inhibition of beta-glucocerebrosidase activity","type":"narrow"},{"name":"inhibition of beta-glucosylceramidase activity","type":"narrow"},{"name":"inhibition of ceramide glucosidase activity","type":"narrow"},{"name":"inhibition of glucocerebrosidase activity","type":"narrow"},{"name":"inhibition of glucosphingosine glucosylhydrolase activity","type":"narrow"},{"name":"inhibition of glucosylceramidase activity","type":"narrow"},{"name":"inhibition of glucosylcerebrosidase activity","type":"narrow"},{"name":"inhibition of glucosylsphingosine beta-D-glucosidase activity","type":"narrow"},{"name":"inhibition of glucosylsphingosine beta-glucosidase activity","type":"narrow"},{"name":"inhibition of psychosine hydrolase activity","type":"narrow"},{"name":"negative regulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"negative regulation of GCase activity","type":"exact"},{"name":"negative regulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"negative regulation of acid beta-glucosidase activity","type":"exact"},{"name":"negative regulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"negative regulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"negative regulation of beta-glucosylceramidase activity","type":"exact"},{"name":"negative regulation of ceramide glucosidase activity","type":"exact"},{"name":"negative regulation of glucocerebrosidase activity","type":"exact"},{"name":"negative regulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"negative regulation of glucosylcerebrosidase activity","type":"exact"},{"name":"negative regulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"negative regulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"negative regulation of psychosine hydrolase activity","type":"exact"}],"termid":"GO:1905124"}


id: GO:0002313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a naive B cell acquires the specialized features of a mature or memory B cell during an immune response.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell activation involved in immune response","termid":"GO:0002312"},{"relation_name":"is_a","term_name":"mature B cell differentiation","termid":"GO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature B cell differentiation involved in immune response","synonyms":[{"name":"mature B cell development involved in immune response","type":"related"},{"name":"mature B cell differentiation during immune response","type":"related"},{"name":"mature B lymphocyte differentiation during immune response","type":"related"},{"name":"mature B-cell differentiation during immune response","type":"related"},{"name":"mature B-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002313"}


id: PBO:0061940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily P member 1 (gene/pseudogene)","termid":"PBO:0061940"}


id: SO:0001636
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within 2KB 5' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upstream_gene_variant","termid":"SO:0001631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2KB_upstream_variant","synonyms":[{"name":"2KB upstream variant","type":"exact"},{"name":"near-gene-5","type":"exact"}],"termid":"SO:0001636"}


id: PBO:0075930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 22","termid":"PBO:0075930"}


id: GO:0070728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-leucine, 2-amino-4-methylpentanoic acid.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"L-leucine binding","synonyms":[{"name":"Leu binding","type":"broad"},{"name":"leucine binding","type":"broad"}],"termid":"GO:0070728"}


id: FYPO:0009032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of bortezomib than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to bortezomib","synonyms":[{"name":"resistance to bortezomib during mitotic cell cycle","type":"related"},{"name":"resistance to bortezomib during vegetative growth","type":"exact"},{"name":"resistant to bortezomib","type":"exact"}],"termid":"FYPO:0009032"}


id: PBO:0062547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily L member 1 pseudogene","termid":"PBO:0062547"}


id: GO:1901936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-caryophyllene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"beta-caryophyllene metabolic process","termid":"GO:1901935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-caryophyllene catabolic process","synonyms":[{"name":"beta-caryophyllene breakdown","type":"exact"},{"name":"beta-caryophyllene catabolism","type":"exact"},{"name":"beta-caryophyllene degradation","type":"exact"}],"termid":"GO:1901936"}


id: PBO:0012025
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae Ypd1","termid":"PBO:0012025"}


id: PATO:0002286
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Branchiness quality inhering in a bearer by virtue of decreasing the degree to which there are subdivisions or offshoots in a bearer entity.","definition_xrefs":["PATOC:CVS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased branchiness","termid":"PATO:0002286"}


id: GO:1905312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:rl","GO_REF:0000058","PMID:17628518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:1905310"},{"relation_name":"positively_regulates","term_name":"cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:0003253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","synonyms":[{"name":"activation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"narrow"},{"name":"up regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"up-regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"upregulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"}],"termid":"GO:1905312"}


id: PBO:0034815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease association, microcephalic primordial dwarfism","termid":"PBO:0034815"}


id: PBO:0071528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 31","termid":"PBO:0071528"}


id: PATO:0000693
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000693 late (obsolete PATO:0000693)","termid":"PATO:0000693"}


id: PBO:0067516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 657, pseudogene","termid":"PBO:0067516"}


id: GO:0102805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: codeine + 2-oxoglutarate + O2 = morphine + formaldehyde + succinate + CO2.","definition_xrefs":["RHEA:27413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"codeine O-demethylase activity","secondary_identifiers":["MetaCyc:RXN-8152","EC:1.14.11.32"],"termid":"GO:0102805"}


id: PBO:0030297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_division_site","termid":"PBO:0030297"}


id: PBO:0060053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 41","termid":"PBO:0060053"}


id: GO:2000436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein neddylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"is_a","term_name":"regulation of protein neddylation","termid":"GO:2000434"},{"relation_name":"positively_regulates","term_name":"protein neddylation","termid":"GO:0045116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of protein neddylation","synonyms":[{"name":"positive regulation of RUB1-protein conjugation","type":"exact"}],"termid":"GO:2000436"}


id: GO:0033485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyanidin 3-O-glucoside, a basic anthocyanin responsible for red to magenta coloration of flowers and fruits.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"cyanidin 3-O-glucoside metabolic process","termid":"GO:1901038"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside biosynthetic process","synonyms":[{"name":"cyanidin 3-O-glucoside anabolism","type":"exact"},{"name":"cyanidin 3-O-glucoside biosynthesis","type":"exact"},{"name":"cyanidin 3-O-glucoside formation","type":"exact"},{"name":"cyanidin 3-O-glucoside synthesis","type":"exact"}],"termid":"GO:0033485"}


id: PBO:0057883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3187","termid":"PBO:0057883"}


id: GO:2000166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in pericardium morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of planar cell polarity pathway involved in heart morphogenesis","termid":"GO:2000160"},{"relation_name":"negatively_regulates","term_name":"planar cell polarity pathway involved in pericardium morphogenesis","termid":"GO:0061354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of planar cell polarity pathway involved in pericardium morphogenesis","termid":"GO:2000166"}


id: PBO:0073484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGMS1 antisense RNA 1","termid":"PBO:0073484"}


id: GO:0008926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol 1-phosphate + NAD+ = D-fructose 6-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mannitol-1-phosphate 5-dehydrogenase activity","secondary_identifiers":["MetaCyc:MANNPDEHYDROG-RXN","RHEA:19661"],"termid":"GO:0008926"}


id: PBO:0045443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-30 histone methyltransferase complex regulatory subunit","termid":"PBO:0045443"}


id: PBO:0027391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione_disulfide_oxidoreductase_activity","termid":"PBO:0027391"}


id: PBO:0048305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 15","termid":"PBO:0048305"}


id: PBO:0031713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_mitochondrial_transport","termid":"PBO:0031713"}


id: GO:1904456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuronal action potential.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25126967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of action potential","termid":"GO:0045759"},{"relation_name":"is_a","term_name":"negative regulation of transmission of nerve impulse","termid":"GO:0051970"},{"relation_name":"is_a","term_name":"regulation of neuronal action potential","termid":"GO:0098908"},{"relation_name":"negatively_regulates","term_name":"neuronal action potential","termid":"GO:0019228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuronal action potential","synonyms":[{"name":"down regulation of generation of action potential","type":"related"},{"name":"down regulation of neuronal action potential","type":"exact"},{"name":"down-regulation of generation of action potential","type":"related"},{"name":"down-regulation of neuronal action potential","type":"exact"},{"name":"downregulation of generation of action potential","type":"related"},{"name":"downregulation of neuronal action potential","type":"exact"},{"name":"inhibition of generation of action potential","type":"related"},{"name":"inhibition of neuronal action potential","type":"narrow"},{"name":"negative regulation of generation of action potential","type":"related"}],"termid":"GO:1904456"}


id: PBO:0054799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2212","termid":"PBO:0054799"}


id: PBO:0091844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, heat shock specific","termid":"PBO:0091844"}


id: PBO:0085527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S27, no bacterial homolog; RPS27A has a paralog, RPS27B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0085527"}


id: PBO:0051833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 7","termid":"PBO:0051833"}


id: FYPO:0003831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the cytokinesis after mitosis checkpoint does not occur. The cytokinesis after mitosis checkpoint normally delays the G2/M transition of a mitotic cell cycle if cytokinesis was not completed correctly in the previous cell cycle. Abolished arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["GO:0044878","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis checkpoint","termid":"FYPO:0003830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"abolished response to cytokinesis checkpoint signaling","synonyms":[{"name":"abolished cytokinesis after mitosis checkpoint","type":"related"},{"name":"abolished cytokinesis checkpoint activation","type":"related"},{"name":"abolished cytokinesis checkpoint arrest","type":"related"},{"name":"abolished response to cytokinesis after mitosis checkpoint signaling","type":"exact"},{"name":"abolished response to mitotic cell cycle cytokinesis checkpoint signaling","type":"exact"},{"name":"cell cycle arrest resulting from cytokinesis checkpoint activation abolished","type":"exact"}],"termid":"FYPO:0003831"}


id: GO:0033376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"part_of","term_name":"protein localization to T cell secretory granule","termid":"GO:0033374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to T cell secretory granule","synonyms":[{"name":"establishment of protein localisation in T cell secretory granule","type":"exact"},{"name":"establishment of protein localization in T cell secretory granule","type":"exact"},{"name":"establishment of protein localization in T lymphocyte secretory granule","type":"exact"},{"name":"establishment of protein localization in T-cell secretory granule","type":"exact"},{"name":"establishment of protein localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033376"}


id: PBO:0042216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin O","termid":"PBO:0042216"}


id: GO:0009611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to wounding","secondary_identifiers":["GO:0002245"],"synonyms":[{"name":"physiological response to wounding","type":"exact"}],"termid":"GO:0009611"}


id: PATO:0001794
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being wound in a continuous series of loops.","definition_xrefs":["Online_Dictionary:Online_Dictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiling","termid":"PATO:0001794"}


id: PR:O74312
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.07c","synonyms":[{"name":"Spom972h-atg9","type":"exact"}],"termid":"PR:O74312"}


id: PBO:0069743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1024, pseudogene","termid":"PBO:0069743"}


id: SO:0001810
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that mediates binding to PCNA. The consensus sequence is QXX(hh)XX(aa), where (h) denotes residues with moderately hydrophobic side chains and (a) denotes residues with highly hydrophobic aromatic side chains.","definition_xrefs":["PMID:9631646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_protein_contact","termid":"SO:0001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"PIP_box","synonyms":[{"name":"PIP box","type":"exact"}],"termid":"SO:0001810"}


id: GO:0047082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6aR,11aR)-3,9-dihydroxypterocarpan + H+ + NADPH + O2 = (6aS,11aS)-3,6a,9-trihydroxypterocarpan + H2O + NADP+. (6aS,11aS)-3,6a,9-trihydroxypterocarpan is also known as (-)-glycinol.","definition_xrefs":["EC:1.14.14.93","RHEA:15321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3,9-dihydroxypterocarpan 6a-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R03452","MetaCyc:RXN-4505"],"synonyms":[{"name":"(6aR,11aR)-3,9-dihydroxypterocarpan,NADPH:oxygen oxidoreductase (6a-hydroxylating)","type":"related"},{"name":"3,9-dihydroxypterocarpan 6a-hydroxylase activity","type":"exact"},{"name":"3,9-dihydroxypterocarpan 6alpha-monooxygenase","type":"related"}],"termid":"GO:0047082"}


id: GO:0102236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-hexen-3-one + NADPH + H+ = hexan-3-one + NADP.","definition_xrefs":["GOC:pz","PMID:21169366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"trans-4-hexen-3-one reductase activity","secondary_identifiers":["MetaCyc:RXN-12296"],"termid":"GO:0102236"}


id: PBO:0044981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHX33 divergent transcript","termid":"PBO:0044981"}


id: GO:0099526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals that conveys information from the presynapse to the nucleus via cytoskeletal transport of a protein from a presynapse to the component to the nucleus where it affects biochemical processes that occur in the nucleus (e.g DNA transcription, mRNA splicing, or DNA/histone modifications).","definition_xrefs":["GOC:dos","PMID:24317321","PMID:25652077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic signal transduction","termid":"GO:0098928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"presynapse to nucleus signaling pathway","synonyms":[{"name":"presynaptic signaling to nucleus","type":"exact"}],"termid":"GO:0099526"}


id: PBO:0046566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 8, envelope","termid":"PBO:0046566"}


id: FYPO:0000466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of invasive growth is decreased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased invasive growth (obsolete FYPO:0000466)","synonyms":[{"name":"invasive growth: decreased","type":"related"},{"name":"reduced invasive growth","type":"exact"}],"termid":"FYPO:0000466"}


id: GO:0033360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine, via the intermediates diaminopimelate and L-2-acetamido-6-oxoheptanedioate; in this pathway tetrahydrodipicolinate is converted to meso-diaminopimelate in four enzymatic steps.","definition_xrefs":["GOC:mah","MetaCyc:PWY-2941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process via diaminopimelate","termid":"GO:0009089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lysine biosynthetic process via diaminopimelate and L-2-acetamido-6-oxoheptanedioate","synonyms":[{"name":"lysine anabolism via diaminopimelate and L-2-acetamido-6-oxoheptanedioate","type":"exact"},{"name":"lysine biosynthesis via diaminopimelic acid and L-2-acetamido-6-oxoheptanedioate","type":"exact"},{"name":"lysine biosynthetic process via diaminopimelic acid and L-2-acetamido-6-oxoheptanedioate","type":"exact"},{"name":"lysine formation via diaminopimelate and L-2-acetamido-6-oxoheptanedioate","type":"exact"},{"name":"lysine synthesis via diaminopimelate and L-2-acetamido-6-oxoheptanedioate","type":"exact"}],"termid":"GO:0033360"}


id: PBO:0030202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_multiseptate_vegetative_cell","termid":"PBO:0030202"}


id: PBO:0030539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cAMP_level","termid":"PBO:0030539"}


id: PBO:0112835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved nucleolar protein, human CCDC137 ortholog, implicated in rDNA metabolism or ribosome biogenesis","termid":"PBO:0112835"}


id: GO:0061001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of postsynapse organization","termid":"GO:0099175"},{"relation_name":"regulates","term_name":"dendritic spine morphogenesis","termid":"GO:0060997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic spine morphogenesis","termid":"GO:0061001"}


id: PBO:0074519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A11","termid":"PBO:0074519"}


id: GO:1904769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to isopentadecanoic acid.","definition_xrefs":["GOC:kmv","PMID:19828452","GOC:TermGenie","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"isopentadecanoic acid binding","synonyms":[{"name":"13-methylmyristic acid binding","type":"exact"}],"termid":"GO:1904769"}


id: GO:0019002
data:
  {"annotated_genes":["SJAG_04410","SJAG_00044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85014,111769],"is_not":false,"summary":null,"term":"GO:0019002"}]},"cv_name":"molecular_function","definition":"Binding to GMP, guanosine monophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GMP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019002","terms_by_termid":{"GO:0019002":null}}


id: FYPO:0001165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell that is exposed to anaerobic conditions fails to grow upon being returned to aerobic conditions, and eventually dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable cell following anaerobic growth","synonyms":[{"name":"inviable following anaerobic vegetative growth","type":"exact"},{"name":"lethal; cell following anaerobic growth","type":"exact"}],"termid":"FYPO:0001165"}


id: PBO:0031123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_ammonia_nitrogen_source","termid":"PBO:0031123"}


id: GO:0002866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an acute inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of acute inflammatory response","termid":"GO:0002675"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response to antigenic stimulus","termid":"GO:0002863"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to antigenic stimulus","termid":"GO:0002864"},{"relation_name":"positively_regulates","term_name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acute inflammatory response to antigenic stimulus","synonyms":[{"name":"activation of acute inflammatory response to antigenic stimulus","type":"narrow"},{"name":"stimulation of acute inflammatory response to antigenic stimulus","type":"narrow"},{"name":"up regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"up-regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"upregulation of acute inflammatory response to antigenic stimulus","type":"exact"}],"termid":"GO:0002866"}


id: PR:Q09832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA wybutosine-synthesizing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23245:SF25","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA wybutosine-synthesizing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.06c","secondary_identifiers":["UniProtKB:Q09832"],"synonyms":[{"name":"SPAC4G8.06c","type":"related"},{"name":"Spom972h-TRMT12","type":"exact"},{"name":"tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-yW-synthesizing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tyw2","type":"related"}],"termid":"PR:Q09832"}


id: PBO:0079591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D3 pseudogene 3","termid":"PBO:0079591"}


id: GO:0000005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in the correct assembly of ribosomes or ribosomal subunits in vivo, but is not a component of the assembled ribosome when performing its normal biological function.","definition_xrefs":["GOC:jl","PMID:12150913"],"gene_count":0,"genotype_count":0,"name":"obsolete ribosomal chaperone activity (obsolete GO:0000005)","synonyms":[{"name":"ribosomal chaperone activity","type":"exact"}],"termid":"GO:0000005"}


id: GO:0072226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric long descending thin limb bend over time, from its formation to the mature structure. The metanephric long descending thin limb bend is a part of the descending thin limb of a long nephron that lies beyond the prebend segment in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long descending thin limb bend development","termid":"GO:0072065"},{"relation_name":"part_of","term_name":"metanephric descending thin limb development","termid":"GO:0072220"},{"relation_name":"part_of","term_name":"metanephric long descending thin limb development","termid":"GO:0072269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric long descending thin limb bend development","termid":"GO:0072226"}


id: PBO:0064696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 32","termid":"PBO:0064696"}


id: GO:0050005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA = 3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.57","RHEA:24144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isohexenylglutaconyl-CoA hydratase activity","secondary_identifiers":["UM-BBD_reactionID:r1167","KEGG_REACTION:R03493","MetaCyc:ISOHEXENYLGLUTACONYL-COA-HYDRATASE-RXN"],"synonyms":[{"name":"3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA hydro-lyase [3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA-forming]","type":"related"},{"name":"3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA hydro-lyase activity","type":"related"},{"name":"3-hydroxy-3-isohexenylglutaryl-CoA-hydrolase activity","type":"related"},{"name":"beta-isohexenylglutaconyl-CoA-hydratase activity","type":"related"},{"name":"isohexenylglutaconyl coenzyme A hydratase activity","type":"related"}],"termid":"GO:0050005"}


id: PBO:0045583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 5","termid":"PBO:0045583"}


id: PBO:0084400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lunapark family member involved in ER network formation; regulates the ER asymmetry-induced inheritance block during ER stress; localizes to ER junctions and this localization is regulated by the yeast atlastin ortholog Sey1p; required for reticulophagy where it is proposed to stabilize the actin-dependent remodeling of the ER; interacts with the reticulon protein Rtn1p; induced in response to the DNA-damaging agent MMS","termid":"PBO:0084400"}


id: PBO:0081524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 433","termid":"PBO:0081524"}


id: MOD:00758
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to O4-(N-acetylamino)glucosyl-L-hydroxyproline.","definition_xrefs":["RESID:AA0390","PubMed:15238247","PubMed:9660787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"O4-(N-acetylamino)hexosyl-L-hydroxyproline","termid":"MOD:01677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O4-(N-acetylamino)glucosyl-L-hydroxyproline","synonyms":[{"name":"(2S,4R)-4-[2-acetamido-2-deoxy-alpha-D-glucopyranosyloxy]pyrrolidine-2-carboxylic acid","type":"exact"},{"name":"4-(N-acetylglucosaminyloxy)proline","type":"exact"},{"name":"4-[(2-N-acetylamino)-alpha-D-glucopyranosyl]oxyproline","type":"exact"},{"name":"CARBOHYD O-linked (GlcNAc) hydroxyproline","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O4-(N-acetylamino)glucosyl-L-hydroxyproline","type":"exact"},{"name":"O4-glycosyl-hydroxyproline","type":"exact"},{"name":"O4GlcNAcHyPro","type":"exact"},{"name":"alpha-2-(N-acetylamino)glucopyranosyl-4-hydroxyproline","type":"exact"}],"termid":"MOD:00758"}


id: GO:1902898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acid methyl ester.","definition_xrefs":["GOC:mengo_curators","PMID:16570218","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid methyl ester metabolic process","synonyms":[{"name":"FAME metabolic process","type":"exact"},{"name":"fatty acid methyl ester metabolism","type":"exact"}],"termid":"GO:1902898"}


id: PBO:0065482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2 pseudogene 1","termid":"PBO:0065482"}


id: GO:0006865
data:
  {"annotated_genes":["SJAG_02941","SJAG_04957","SJAG_01770","SJAG_02946","SJAG_04135","SJAG_00015","SJAG_03256","SJAG_02113","SJAG_02029","SJAG_04983","SJAG_05342","SJAG_04296","SJAG_04903","SJAG_00991","SJAG_04718","SJAG_02133","SJAG_02955","SJAG_01998","SJAG_02062","SJAG_00543","SJAG_03827","SJAG_04725","SJAG_04984","SJAG_00051","SJAG_01923","SJAG_01994","SJAG_02947","SJAG_00019","SJAG_00522","SJAG_02150","SJAG_02144","SJAG_01636","SJAG_00877","SJAG_03829","SJAG_04787","SJAG_04715","SJAG_00626","SJAG_02716","SJAG_03400","SJAG_04588","SJAG_04295","SJAG_02605","SJAG_00149","SJAG_04637","SJAG_03899","SJAG_01336","SJAG_03591","SJAG_01096","SJAG_06598","SJAG_05346","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032974"},{"annotations":[99934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032975"},{"annotations":[83696,114420,114314,83699,83702,114318,83698,74535,76476,114515,91809,83743,105530,96123,114311,75593,83746,85827,83697,83701,99631,105523,114312,115060,114315,99868,83695,83744,102115,114313,114316,83700,109795,83745,106680,114317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003333"},{"annotations":[98900,106113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"},{"annotations":[86511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[90699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[63520,100122,100123,100124,100125,84573,93455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990822"},{"annotations":[86512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015802"},{"annotations":[63032,109789,115064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[62674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006868"},{"annotations":[96339,94329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"},{"annotations":[106114,98901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"},{"annotations":[92133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902475"},{"annotations":[96461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[93470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[99935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[94921,62675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[92663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"},{"annotations":[94330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[99936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901481"},{"annotations":[99937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[92664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"},{"annotations":[93471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[96462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[98902,99939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[93472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[106115,99940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[99941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[64753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015825"},{"annotations":[99942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[103999,94331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"},{"annotations":[84224],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[106632,87840,89421,94977],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[89422,94978,87841],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[89423],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[97312,96454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905647"},{"annotations":[86730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140300"},{"annotations":[62673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015828"}]},"cv_name":"biological_process","definition":"The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00015":null,"SJAG_00019":null,"SJAG_00051":null,"SJAG_00149":null,"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00877":null,"SJAG_00991":null,"SJAG_01096":null,"SJAG_01336":null,"SJAG_01636":null,"SJAG_01770":null,"SJAG_01923":null,"SJAG_01994":null,"SJAG_01998":null,"SJAG_02029":null,"SJAG_02062":null,"SJAG_02113":null,"SJAG_02133":null,"SJAG_02144":null,"SJAG_02150":null,"SJAG_02605":null,"SJAG_02716":null,"SJAG_02941":null,"SJAG_02946":null,"SJAG_02947":null,"SJAG_02955":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03591":null,"SJAG_03827":null,"SJAG_03829":null,"SJAG_03899":null,"SJAG_03970":null,"SJAG_04135":null,"SJAG_04295":null,"SJAG_04296":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04715":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04787":null,"SJAG_04903":null,"SJAG_04957":null,"SJAG_04983":null,"SJAG_04984":null,"SJAG_05342":null,"SJAG_05346":null,"SJAG_06598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"amino 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id: PBO:0071977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 5","termid":"PBO:0071977"}


id: GO:0010333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.","definition_xrefs":["EC:4.2.3.-","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"terpene synthase activity","termid":"GO:0010333"}


id: PBO:0060914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 1","termid":"PBO:0060914"}


id: PBO:0062559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 6 (gene/pseudogene)","termid":"PBO:0062559"}


id: PBO:0080005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 divergent transcript","termid":"PBO:0080005"}


id: PBO:0039740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L2","termid":"PBO:0039740"}


id: PBO:0084425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major mitochondrial nuclease; has RNAse and DNA endo- and exonucleolytic activities; roles in mitochondrial recombination, apoptosis and maintenance of polyploidy; involved in fragmentation of genomic DNA during PND (programmed nuclear destruction); encodes ortholog of mammalian endoG","termid":"PBO:0084425"}


id: SO:0000922
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to substitute an U for a C.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000922 substitute_C_to_U (obsolete SO:0000922)","synonyms":[{"name":"substitute C to U","type":"exact"}],"termid":"SO:0000922"}


id: PR:Q9P3W4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dli1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3W4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate light chain dil1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.04c","synonyms":[{"name":"Spom972h-dli1","type":"exact"}],"termid":"PR:Q9P3W4"}


id: PBO:0050164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 20","termid":"PBO:0050164"}


id: PBO:0065631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 11","termid":"PBO:0065631"}


id: GO:0140031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon phosphorylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"phosphorylation-dependent protein binding","termid":"GO:0140031"}


id: PBO:0075971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 13","termid":"PBO:0075971"}


id: PBO:0002834
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA Elimiation Defective","termid":"PBO:0002834"}


id: GO:0050636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16-epivellosimine + acetyl-CoA = CoA + vinorine.","definition_xrefs":["EC:2.3.1.160","RHEA:24016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"vinorine synthase activity","secondary_identifiers":["MetaCyc:2.3.1.160-RXN","KEGG_REACTION:R05876"],"synonyms":[{"name":"acyl-CoA:16-epivellosimine O-acetyltransferase (cyclizing)","type":"related"}],"termid":"GO:0050636"}


id: PBO:0034654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_boundary_element_IRC1L","termid":"PBO:0034654"}


id: GO:0102402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-phenylethyl 6-O-beta-D-xylopyranosyl-beta-D-glucopyranoside + H2O = 2-phenylethanol + 6-O-(beta-D-xylopyranosyl)-beta-D-glucopyranose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-phenylethyl 6-O-beta-D-xylopyranosyl-beta-D-glucopyranoside glucosidase (Yabukita) activity (obsolete GO:0102402)","termid":"GO:0102402"}


id: FYPO:0003337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell septum is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to septum","termid":"FYPO:0002718"},{"relation_name":"is_a","term_name":"increased protein localization to cell division site","termid":"FYPO:0004655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to septum","synonyms":[{"name":"increased protein localisation to septum","type":"exact"},{"name":"increased protein localization to cell septum","type":"exact"},{"name":"increased protein localization to division septum","type":"exact"},{"name":"increased protein localization to septum during mitotic cell cycle","type":"related"},{"name":"increased protein localization to septum during vegetative growth","type":"exact"}],"termid":"FYPO:0003337"}


id: GO:0060591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a mesenchymal cell, acquires specialized structural and/or functional features of a chondroblast. Differentiation includes the processes involved in commitment of a cell to a chondroblast fate. A chondroblast is a precursor cell to chondrocytes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondroblast differentiation","synonyms":[{"name":"chondrocyte progenitor cell differentiation","type":"related"}],"termid":"GO:0060591"}


id: GO:0008882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [L-glutamate:ammonia ligase (ADP-forming)] = diphosphate + adenylyl-[L-glutamate:ammonia ligase (ADP-forming)].","definition_xrefs":["EC:2.7.7.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"[glutamate-ammonia-ligase] adenylyltransferase activity","secondary_identifiers":["MetaCyc:GSADENYLATION-RXN","RHEA:18589"],"synonyms":[{"name":"ATP:L-glutamate:ammonia ligase (ADP-forming) adenylyltransferase activity","type":"related"},{"name":"ATP:[glutamate-ammonia-ligase] adenylyltransferase activity","type":"exact"},{"name":"ATP:glutamine synthetase adenylyltransferase activity","type":"related"},{"name":"adenosine triphosphate:glutamine synthetase adenylyltransferase activity","type":"related"},{"name":"glutamate-ammonia-ligase adenylyltransferase activity","type":"exact"},{"name":"glutamine-synthetase adenylyltransferase activity","type":"related"}],"termid":"GO:0008882"}


id: PBO:0083798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein required for pre-mRNA splicing; associates transiently with the spliceosomal NTC ('nineteen complex') and acts after Prp2p to promote the first catalytic reaction of splicing","termid":"PBO:0083798"}


id: PBO:0046046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit D","termid":"PBO:0046046"}


id: PBO:0079927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"URGCP-MRPS24 readthrough","termid":"PBO:0079927"}


id: PBO:0072657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 9","termid":"PBO:0072657"}


id: PBO:0013453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1102/ mitochondrial ribosomal protein Rsm2202, fusion protein (predicted)","termid":"PBO:0013453"}


id: PBO:0077490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 210","termid":"PBO:0077490"}


id: PBO:0075671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 2","termid":"PBO:0075671"}


id: MOD:01036
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01181. Remap to MOD:01181.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01036 O-methyl aspartyl (obsolete MOD:01036)","termid":"MOD:01036"}


id: PBO:0043219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLK4 associating serine/arginine rich protein","termid":"PBO:0043219"}


id: PBO:0069938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1231, pseudogene","termid":"PBO:0069938"}


id: PBO:0040762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beclin 2","termid":"PBO:0040762"}


id: GO:0047245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosaminyldiphosphoundecaprenol + UDP-D-glucose = beta-D-glucosyl-1,4-N-acetyl-D-glucosaminyldiphosphoundecaprenol + UDP.","definition_xrefs":["EC:2.4.1.188","MetaCyc:2.4.1.188-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"N-acetylglucosaminyldiphosphoundecaprenol glucosyltransferase activity","secondary_identifiers":["RHEA:20952"],"synonyms":[{"name":"UDP-D-glucose:N-acetylglucosaminyl pyrophosphorylundecaprenol glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:N-acetyl-D-glucosaminyldiphosphoundecaprenol 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:N-acetyl-D-glucosaminyldiphosphoundecaprenol 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-acetylglucosaminylpyrophosphorylundecaprenol glucosyltransferase activity","type":"related"}],"termid":"GO:0047245"}


id: GO:0032885
data:
  {"annotated_genes":["SJAG_00963","SJAG_00610","SJAG_04668","SJAG_04509","SJAG_04462","SJAG_04666","SJAG_00424","SJAG_01376","SJAG_01787","SJAG_04771","SJAG_03705","SJAG_02278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77736,87039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[88512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060635"},{"annotations":[88515,83651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[84031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[86881,88501,88517,113973,101423,98946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[85559,88521,98948,91041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of polysaccharides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"regulates","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_00963":null,"SJAG_01376":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of polysaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032885","terms_by_termid":{"GO:0032951":null,"GO:0045719":null,"GO:0060635":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null}}


id: FYPO:0000636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell population growth","termid":"FYPO:0001356"},{"relation_name":"is_a","term_name":"increased cell population growth","termid":"FYPO:0003937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0005447","FYPO:0002057","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased cell population growth rate","synonyms":[{"name":"enhanced cell population growth","type":"related"},{"name":"fast cell population growth","type":"exact"},{"name":"increased cell population growth rate during mitotic cell cycle","type":"related"},{"name":"increased cell population growth rate during vegetative growth","type":"exact"},{"name":"increased cell population proliferation","type":"related"},{"name":"increased cell proliferation","type":"related"}],"termid":"FYPO:0000636"}


id: PBO:0028152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_elongated_multinucleate_aseptate_cell","termid":"PBO:0028152"}


id: PBO:0055474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2907","termid":"PBO:0055474"}


id: PBO:0050033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 1","termid":"PBO:0050033"}


id: PBO:0002107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A)-specific ribonuclease complex subunit Pan3 (predicted)","termid":"PBO:0002107"}


id: PBO:0030880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_component_organization_during_vegetative_growth","termid":"PBO:0030880"}


id: GO:0051680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 6-alpha-maltosylglucose, also known as isopanose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide biosynthetic process","termid":"GO:0009312"},{"relation_name":"is_a","term_name":"6-alpha-maltosylglucose metabolic process","termid":"GO:0051679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"6-alpha-maltosylglucose biosynthetic process","synonyms":[{"name":"isopanose biosynthesis","type":"exact"},{"name":"isopanose biosynthetic process","type":"exact"}],"termid":"GO:0051680"}


id: SO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intronic 2 bp region bordering exon. A splice_site that adjacent_to exon and overlaps intron.","definition_xrefs":["SO:cjm","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site","termid":"SO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis_splice_site","synonyms":[{"name":"cis splice site","type":"exact"}],"termid":"SO:0001419"}


id: GO:2000097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle cell-matrix adhesion.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-matrix adhesion","termid":"GO:0001952"},{"relation_name":"regulates","term_name":"smooth muscle cell-matrix adhesion","termid":"GO:0061302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle cell-matrix adhesion","termid":"GO:2000097"}


id: PBO:0079132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSKU antisense RNA 1","termid":"PBO:0079132"}


id: FYPO:0006959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of succinate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular succinate level","synonyms":[{"name":"increased cellular succinate level during mitotic cell cycle","type":"related"},{"name":"increased cellular succinate level during vegetative growth","type":"exact"},{"name":"increased cellular succinate(2-) level","type":"exact"},{"name":"increased succinate accumulation","type":"related"}],"termid":"FYPO:0006959"}


id: FYPO:0007751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short spindle assembles during the first meiotic nuclear division, and may begin elongation, but does not elongate normally or completely, and collapses during prometaphase I. Upon collapse the spindle may break or shrink.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle collapse during meiosis I","termid":"FYPO:0007103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"spindle collapse during meiotic prometaphase I","synonyms":[{"name":"meiotic spindle breakage during prometaphase I","type":"exact"},{"name":"broken meiotic spindle during prometaphase I","type":"related"},{"name":"meiosis I spindle collapse during prometaphase","type":"exact"},{"name":"meiotic spindle collapse during prometaphase I","type":"exact"},{"name":"spindle collapse during prometaphase I","type":"exact"},{"name":"spindle collapse during prometaphase of meiosis I","type":"exact"}],"termid":"FYPO:0007751"}


id: GO:0034847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: naphthyl-2-hydroxymethyl-succinyl-CoA = naphthyl-2-oxomethyl-succinyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthyl-2-hydroxymethyl-succinyl-CoA dehydrogenase activity (obsolete GO:0034847)","termid":"GO:0034847"}


id: PBO:0009798
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faster evolving duplicate","termid":"PBO:0009798"}


id: GO:0071360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to exogenous dsRNA","termid":"GO:0043330"},{"relation_name":"is_a","term_name":"cellular response to dsRNA","termid":"GO:0071359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to exogenous dsRNA","synonyms":[{"name":"cellular response to exogenous double-stranded RNA","type":"exact"},{"name":"cellular response to viral dsRNA","type":"narrow"}],"termid":"GO:0071360"}


id: GO:0001667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell migration that is accomplished by extension and retraction of a pseudopodium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ameboidal-type cell migration","synonyms":[{"name":"ameboid cell migration","type":"exact"},{"name":"amoeboid cell migration","type":"exact"},{"name":"amoeboidal cell migration","type":"exact"}],"termid":"GO:0001667"}


id: MOD:01043
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a p-nitrobenzyl group for the hydrogen atom of a carboxyl group.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p-nitrobenzyl ester modified residue","synonyms":[{"name":"ONb","type":"exact"}],"termid":"MOD:01043"}


id: PBO:0076157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 pseudogene 1","termid":"PBO:0076157"}


id: PBO:0064740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 76","termid":"PBO:0064740"}


id: PBO:0004920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer beta' subunit (predicted)","termid":"PBO:0004920"}


id: GO:0043149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a stress fiber. A stress fiber is a contractile actin filament bundle that consists of short actin filaments with alternating polarity.","definition_xrefs":["GOC:go_curators","GOC:mah","PMID:16651381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractile actin filament bundle assembly","termid":"GO:0030038"},{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"stress fiber assembly","synonyms":[{"name":"actin cable assembly","type":"related"},{"name":"actin cable formation","type":"related"},{"name":"stress fibre biosynthesis","type":"related"},{"name":"stress fibre formation","type":"related"}],"termid":"GO:0043149"}


id: FYPO:0005339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to nucleus during cellular response to hydroxyurea","synonyms":[{"name":"increased protein localisation to nucleus during cellular response to hydroxyurea","type":"exact"},{"name":"increased protein localization to nucleus during cellular response to HU","type":"exact"},{"name":"increased protein localization to nucleus during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleus during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0005339"}


id: GO:0110005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tRNA C5-cytosine methylation.","definition_xrefs":["GOC:vw","PMID:23074192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tRNA C5-cytosine methylation","termid":"GO:0110003"},{"relation_name":"is_a","term_name":"positive regulation of tRNA methylation","termid":"GO:0110004"},{"relation_name":"positively_regulates","term_name":"tRNA C5-cytosine methylation","termid":"GO:0002946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of tRNA C5-cytosine methylation","termid":"GO:0110005"}


id: PBO:0065256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 22","termid":"PBO:0065256"}


id: PBO:0086178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the spindle pole body (SPB) duplication; localizes at the cytoplasmic side of the central plaque periphery of the SPB; forms a complex with a nuclear envelope protein Mps2p and SPB components Spc29p and Kar1p; required for mitotic functions of Cdc5p","termid":"PBO:0086178"}


id: GO:0090729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively with one or more biological molecules in another (target) organism, initiating pathogenesis (leading to an abnormal, generally detrimental state) in the target organism. The activity should refer to an evolved function of the active gene product, i.e. one that was selected for. Examples include the activity of botulinum toxin, and snake venom.","definition_xrefs":["GOC:pt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"toxin activity","secondary_identifiers":["Wikipedia:Toxin","GO:0050827"],"synonyms":[{"name":"toxin receptor binding","type":"exact"}],"termid":"GO:0090729"}


id: FYPO:0005280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more glucose-repressed mRNAs measured in a cell is normal (i.e. indistinguishable from wild type). Glucose-repressed mRNAs are transcribed from genes whose transcription is negatively regulated when glucose is present.","definition_xrefs":["PomBase:mah","PMID:17261596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal level of glucose-repressed gene mRNA during vegetative growth","secondary_identifiers":["FYPO:0005076"],"synonyms":[{"name":"normal glucose starvation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"normal glucose-repressed gene mRNA accumulation during vegetative growth","type":"related"},{"name":"normal level of glucose starvation gene RNA during vegetative growth","type":"exact"},{"name":"normal level of glucose starvation gene mRNA during mitotic cell cycle","type":"related"},{"name":"normal level of glucose starvation gene mRNA during vegetative growth","type":"exact"},{"name":"normal level of glucose starvation gene transcripts during vegetative growth","type":"exact"},{"name":"normal level of glucose-repressed gene RNA during vegetative growth","type":"exact"},{"name":"normal level of glucose-repressed gene mRNA during mitotic cell cycle","type":"related"},{"name":"normal level of glucose-repressed gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005280"}


id: PBO:0057966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3688-1","termid":"PBO:0057966"}


id: PBO:0038967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADNP homeobox 2","termid":"PBO:0038967"}


id: PR:P48010
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A septin-14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01283","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.15c","secondary_identifiers":["UniProtKB:P48010"],"synonyms":[{"name":"Spom972h-SEPT14","type":"exact"},{"name":"mei4-dependent protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 28 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P48010"}


id: PBO:0060114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 15","termid":"PBO:0060114"}


id: PBO:0049904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes family bHLH transcription factor 5","termid":"PBO:0049904"}


id: GO:0071106
data:
  {"annotated_genes":["SJAG_03452","SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[86939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The process in which adenosine 3',5'-bisphosphate is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03452":null,"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"adenosine 3',5'-bisphosphate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 3',5'-bisphosphate membrane transport","type":"exact"},{"name":"adenosine 3',5'-diphosphate transport","type":"exact"},{"name":"adenosine 3'-phosphate-5'-phosphate transmembrane transport","type":"exact"}],"termid":"GO:0071106","terms_by_termid":{"GO:0035348":null,"GO:1990559":null}}


id: FYPO:0009026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing methionine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002058","FYPO:0000003","FYPO:0002057","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"increased cell population growth on methionine nitrogen source","synonyms":[{"name":"increased growth on methionine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on methionine nitrogen source","type":"exact"}],"termid":"FYPO:0009026"}


id: GO:0050508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP-N-acetyl-D-glucosamine = N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP.","definition_xrefs":["MetaCyc:2.4.1.224-RXN","EC:2.4.1.224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2022851","Reactome:R-HSA-2022919","Reactome:R-HSA-9036290","Reactome:R-HSA-3656254","Reactome:R-HSA-9036283","RHEA:16213","Reactome:R-HSA-3656261"],"synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:beta-D-glucuronosyl-(1->4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-N-acetylglucosaminyltransferase II activity","type":"related"},{"name":"glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-a-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"glucuronyl-N-acetylglucosaminylproteoglycan alpha-1,4-N-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0050508"}


id: SO:0000451
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a polyadenylated mRNA.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_coding_gene","termid":"SO:0001217"},{"relation_name":"transcribed_to","term_name":"polyadenylated_mRNA","termid":"SO:0000871"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_polyadenylated_mRNA","synonyms":[{"name":"gene with polyadenylated mRNA","type":"exact"}],"termid":"SO:0000451"}


id: PBO:0055763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long non coding transcriptional activator of miR34a","termid":"PBO:0055763"}


id: PBO:0007323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoisocitrate dehydrogenase Lys12","termid":"PBO:0007323"}


id: PBO:0084660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial 15S rRNA-binding protein; required for intron removal of COB and COX1 pre-mRNAs; has separable roles in stabilizing mitochondrial 15S rRNA and in maturation of the COB and COX1 mRNAs; contains pentatricopeptide repeat (PPR) motifs; mutant is respiratory deficient and has defective plasma membrane electron transport","termid":"PBO:0084660"}


id: PBO:0045069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP1 antisense RNA 1","termid":"PBO:0045069"}


id: GO:1901637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of maintenance of presynaptic active zone structure.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of maintenance of presynaptic active zone structure (obsolete GO:1901637)","synonyms":[{"name":"activation of maintenance of presynaptic active zone structure","type":"narrow"},{"name":"positive regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"up regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"up-regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"upregulation of maintenance of presynaptic active zone structure","type":"exact"}],"termid":"GO:1901637"}


id: PBO:0045410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 12","termid":"PBO:0045410"}


id: PBO:0076041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 38 like","termid":"PBO:0076041"}


id: SO:0000457
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome duplication involving an insertion from another chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_duplication","termid":"SO:1000037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interchromosomal_duplication","synonyms":[{"name":"interchromosomal duplication","type":"exact"}],"termid":"SO:0000457"}


id: PBO:0091261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing, not reproduced","termid":"PBO:0091261"}


id: FYPO:0003032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to glucose starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during glucose starvation","synonyms":[{"name":"decreased RNA accumulation during glucose starvation","type":"related"},{"name":"decreased RNA level during cellular response to glucose starvation","type":"exact"},{"name":"decreased RNA level during glucose depletion","type":"exact"},{"name":"decreased RNA level during glucose deprivation","type":"exact"},{"name":"decreased RNA level during glucose limitation","type":"related"},{"name":"decreased transcript level during glucose starvation","type":"exact"},{"name":"reduced RNA level during glucose starvation","type":"exact"}],"termid":"FYPO:0003032"}


id: GO:0035911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the descending aorta are generated and organized. The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries. In a two-pass circulatory system blood passes twice through the heart to supply the body once.","definition_xrefs":["MA:0002571","GOC:bf","Wikipedia:Descending_aorta","UBERON:0001514","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"descending aorta development","termid":"GO:0035906"},{"relation_name":"part_of","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"descending aorta morphogenesis","termid":"GO:0035911"}


id: GO:0044194
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory lysosome that is present in cells with cytolytic capability such as cytotoxic T lymphocytes and natural killer cells. Cytolytic granules mediate the storage and regulated excretion of lytic molecules for killing of target cells.","definition_xrefs":["GOC:jl","PMID:12766758","PMID:11052265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"cytolytic granule","termid":"GO:0044194"}


id: GO:0033974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of mixed phospho-anhydride bonds.","definition_xrefs":["EC:3.6.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"nucleoside phosphoacylhydrolase activity","secondary_identifiers":["MetaCyc:3.6.1.24-RXN"],"synonyms":[{"name":"nucleoside-5'-phosphoacylate acylhydrolase activity","type":"related"}],"termid":"GO:0033974"}


id: GO:0045664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuron differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron differentiation","termid":"GO:0045664"}


id: PBO:0050440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein M pseudogene 1","termid":"PBO:0050440"}


id: PBO:0075662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin beta, non-erythrocytic 2","termid":"PBO:0075662"}


id: GO:1901986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ketamine stimulus.","definition_xrefs":["PMID:11251190","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ketamine","termid":"GO:1901986"}


id: GO:0048821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an erythrocyte over time, from its formation to the mature structure.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell development","termid":"GO:0061515"},{"relation_name":"part_of","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte development","synonyms":[{"name":"RBC development","type":"exact"},{"name":"red blood cell development","type":"exact"}],"termid":"GO:0048821"}


id: GO:0071334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rhamnose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to rhamnose","termid":"GO:0032149"},{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to rhamnose stimulus","synonyms":[{"name":"cellular response to L-rhamnose stimulus","type":"narrow"}],"termid":"GO:0071334"}


id: FYPO:0005410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is normal (i.e. indistinguishable from wild type) during mitosis. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation","termid":"FYPO:0002799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein degradation during mitosis","synonyms":[{"name":"normal protein breakdown during mitosis","type":"exact"},{"name":"normal protein catabolic process during mitosis","type":"exact"},{"name":"normal protein catabolism during mitosis","type":"exact"},{"name":"normal protein degradation during mitosis during mitotic cell cycle","type":"related"},{"name":"normal protein degradation during mitosis during vegetative growth","type":"exact"},{"name":"normal protein degradation during mitotic M phase","type":"related"},{"name":"normal protein degradation during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0005410"}


id: PBO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal tubular acidosis","termid":"PBO:0002089"}


id: GO:0045159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II myosin, any member of the class of 'conventional' double-headed myosins that includes muscle myosin.","definition_xrefs":["GOC:mah","PMID:27697842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008092","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"myosin II binding","termid":"GO:0045159"}


id: FYPO:0004970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and elongated when the cell is subject to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"viable elongated vegetative cell during phosphate starvation","synonyms":[{"name":"elongated viable vegetative cell during phosphate starvation","type":"exact"},{"name":"viable elongated cell during phosphate starvation during vegetative growth","type":"exact"},{"name":"viable elongated vegetative cell during cellular response to phosphate starvation","type":"exact"},{"name":"viable elongated vegetative cell during phosphate starvation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004970"}


id: GO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature B cell during an immune response, resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation involved in immune response","termid":"GO:0002285"},{"relation_name":"is_a","term_name":"B cell activation","termid":"GO:0042113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell activation involved in immune response","synonyms":[{"name":"B cell activation during immune response","type":"related"},{"name":"B lymphocyte activation during immune response","type":"related"},{"name":"B-cell activation during immune response","type":"related"},{"name":"B-lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002312"}


id: GO:0033851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 dimethylallyl diphosphate = diphosphate + lavandulyl diphosphate.","definition_xrefs":["RHEA:21676","EC:2.5.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"lavandulyl diphosphate synthase activity","secondary_identifiers":["KEGG_REACTION:R08950","MetaCyc:2.5.1.69-RXN"],"synonyms":[{"name":"FDS-5","type":"related"},{"name":"dimethylallyl-diphosphate:dimethylallyl-diphosphate dimethylallyltransferase (lavandulyl-diphosphate-forming) activity","type":"related"}],"termid":"GO:0033851"}


id: GO:0034143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 4 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 4 signaling pathway","synonyms":[{"name":"regulation of TLR4 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034143"}


id: PBO:0044226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin","termid":"PBO:0044226"}


id: PBO:0086372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl-alcohol dehydrogenase; involved in oxidative stress response; similar to P. chrysosporium aryl-alcohol dehydrogenase; expression induced in cells treated with the mycotoxin patulin; members of the AAD gene family comprise three pairs (AAD3 + AAD15, AAD6/AAD16 + AAD4, AAD10 + AAD14) whose two genes are more related to one another than to other members of the family","termid":"PBO:0086372"}


id: GO:0008056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ocellus over time, from its formation to the mature structure. The ocellus is a simple visual organ of insects.","direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"eye-antennal disc development","termid":"GO:0035214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus development","termid":"GO:0008056"}


id: GO:0046596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the viral entry into the host cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of entry into host","termid":"GO:0052372"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"regulates","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral entry into host cell","synonyms":[{"name":"regulation of viral penetration into host cell","type":"exact"},{"name":"viral escort protein","type":"related"}],"termid":"GO:0046596"}


id: PBO:0048649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein gamma 2","termid":"PBO:0048649"}


id: PBO:0057264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 489","termid":"PBO:0057264"}


id: FYPO:0007820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyphosphate measured in a cell is too low to detect.","definition_xrefs":["PMID:34147496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"polyphosphate absent from cell","synonyms":[{"name":"polyphosphate absent from cell during mitotic cell cycle","type":"related"},{"name":"polyphosphate absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0007820"}


id: PBO:0081580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 507","termid":"PBO:0081580"}


id: GO:0003118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of norepinephrine released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction by norepinephrine","termid":"GO:0003116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by neuronal norepinephrine","synonyms":[{"name":"regulation of vasoconstriction by neuronal noradrenaline","type":"exact"}],"termid":"GO:0003118"}


id: PBO:0000922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit Rna14 (predicted)","termid":"PBO:0000922"}


id: FYPO:0003983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of disulfide oxidoreductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal disulfide oxidoreductase activity","termid":"FYPO:0003982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased disulfide oxidoreductase activity","termid":"FYPO:0003983"}


id: PBO:0042005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 60","termid":"PBO:0042005"}


id: PBO:0035882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_N-linked_glycosylation_during_vegetative_growth","termid":"PBO:0035882"}


id: GO:0106415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"GlcNAc-MurNAc-L-alanyl-gamma-D-glutamyl-meso-diaminopimelyl-D-alanine + H2O = GlcNAc-MurNAc-L-alanyl-gamma-D-glutamyl-meso-diaminopimelate + D-alanine.","definition_xrefs":["PMID:15361936","PMID:10428950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxypeptidase activity","termid":"GO:0004180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0003674","GO:0008233","GO:0003824"],"is_obsolete":false,"name":"muramoyltetrapeptide carboxypeptidase activity","secondary_identifiers":["EC:3.4.17.13","RHEA:48688"],"termid":"GO:0106415"}


id: GO:0000969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A tRNA exon ligation process in which the splice junction phosphate is derived from exogenous ATP. This type of ligation to rejoin the 5' and 3' exons of a tRNA is observed in vertebrate species.","definition_xrefs":["GOC:krc","PMID:17786051"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA exon ligation utilizing ATP as source of linkage phosphate (obsolete GO:0000969)","termid":"GO:0000969"}


id: PBO:0088880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anillin-related medial ring protein Mid1","termid":"PBO:0088880"}


id: GO:0019559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of histidine into other compounds, including imidazol-5-yl-lactate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine catabolic process","termid":"GO:0006548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"histidine catabolic process to imidazol-5-yl-lactate","secondary_identifiers":["MetaCyc:HISTDEG-PWY"],"synonyms":[{"name":"histidine breakdown to imidazol-5-yl-lactate","type":"exact"},{"name":"histidine degradation to imidazol-5-yl-lactate","type":"exact"}],"termid":"GO:0019559"}


id: PBO:0061448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 3 group C member 2","termid":"PBO:0061448"}


id: PBO:0051814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF1R antisense imprinted non-protein coding RNA","termid":"PBO:0051814"}


id: GO:0008612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-lysine to form hypusine, peptidyl-N6-(4-amino-2-hydroxybutyl)-L-lysine.","definition_xrefs":["RESID:AA0116","ISBN:0198547684","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"peptidyl-lysine modification to peptidyl-hypusine","secondary_identifiers":["GO:0046515"],"synonyms":[{"name":"hypusine anabolism","type":"exact"},{"name":"hypusine anabolism from peptidyl-lysine","type":"exact"},{"name":"hypusine biosynthesis","type":"exact"},{"name":"hypusine biosynthetic process","type":"exact"},{"name":"hypusine biosynthetic process from peptidyl-lysine","type":"exact"},{"name":"hypusine formation","type":"exact"},{"name":"hypusine formation from peptidyl-lysine","type":"exact"},{"name":"hypusine synthesis","type":"exact"},{"name":"hypusine synthesis from peptidyl-lysine","type":"exact"},{"name":"hypusinylation","type":"exact"},{"name":"protein hypusination","type":"exact"}],"termid":"GO:0008612"}


id: FYPO:0001632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tyrosine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular tyrosine level","termid":"FYPO:0001641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuolar tyrosine level","synonyms":[{"name":"normal level of tyrosine in vacuole","type":"exact"},{"name":"normal vacuolar L-tyrosine level","type":"exact"},{"name":"normal vacuolar tyrosine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar tyrosine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001632"}


id: FYPO:0006473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of amino acid biosynthesis genes from RNA polymerase II promoters occurs to a lower extent than normal in response to starvation for one or more amino acids. Amino acid biosynthesis genes are those whose products are involved in amino acid biosynthetic processes.","definition_xrefs":["PomBase:mah","PMID:29432178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription of amino acid biosynthesis genes","termid":"FYPO:0006443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"decreased transcription of amino acid biosynthesis genes in response to amino acid starvation","synonyms":[{"name":"decreased transcription of amino acid biosynthesis genes during cellular response to amino acid starvation","type":"exact"},{"name":"decreased transcription of amino acid biosynthesis genes from RNA pol II promoter in response to amino acid starvation","type":"exact"},{"name":"decreased transcription of amino acid biosynthesis genes in response to amino acid starvation during mitotic cell cycle","type":"related"},{"name":"decreased transcription of amino acid biosynthesis genes in response to amino acid starvation during vegetative growth","type":"exact"},{"name":"reduced transcription of amino acid biosynthesis genes in response to amino acid starvation","type":"exact"}],"termid":"FYPO:0006473"}


id: GO:0033939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-D-(1->2)-(4-O-methyl)glucuronosyl links in the main chain of hardwood xylans.","definition_xrefs":["EC:3.2.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"xylan alpha-1,2-glucuronosidase activity","secondary_identifiers":["MetaCyc:3.2.1.131-RXN"],"synonyms":[{"name":"1,2-alpha-glucuronidase activity","type":"related"},{"name":"alpha-(1->2)-glucuronidase activity","type":"related"},{"name":"xylan alpha-D-1,2-(4-O-methyl)glucuronohydrolase activity","type":"related"}],"termid":"GO:0033939"}


id: PBO:0084379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity amino acid permease; may act to supply the cell with amino acids as nitrogen source in nitrogen-poor conditions; transcription is induced under conditions of sulfur limitation; plays a role in regulating Ty1 transposition","termid":"PBO:0084379"}


id: GO:0072224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the metanephric glomerulus over time from its initial formation until its mature state. The metanephric glomerulus is a capillary tuft which forms a close network with the visceral epithelium (podocytes) and the mesangium to form the filtration barrier and is surrounded by Bowman's capsule in nephrons of the mature vertebrate kidney, or metanephros.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus development","termid":"GO:0032835"},{"relation_name":"part_of","term_name":"metanephric nephron development","termid":"GO:0072210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerulus development","synonyms":[{"name":"metanephric glomerular development","type":"exact"}],"termid":"GO:0072224"}


id: PBO:0065673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRT antisense RNA 1","termid":"PBO:0065673"}


id: PBO:0003923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase (predicted)","termid":"PBO:0003923"}


id: PBO:0036241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysferlin-like membrane trafficking protein Mug65 (predicted)","termid":"PBO:0036241"}


id: GO:0035370
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A heterodimeric ubiquitin conjugating enzyme complex that catalyzes assembly of K63-linked polyubiquitin chains and is involved in NF-kappaB activation. In humans at least, the complex comprises the ubiquitin-conjugating enzyme UBC13 and ubiquitin-conjugating enzyme variant 1A (UEV1A).","definition_xrefs":["GOC:amm","PMID:16129784"],"gene_count":0,"genotype_count":0,"name":"obsolete UBC13-UEV1A complex (obsolete GO:0035370)","termid":"GO:0035370"}


id: PBO:0012232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vps20 associated protein Vts1 (predicted)","termid":"PBO:0012232"}


id: PBO:0066722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 19","termid":"PBO:0066722"}


id: PBO:0039791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAF pseudogene 2","termid":"PBO:0039791"}


id: PBO:0089244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase Shm1","termid":"PBO:0089244"}


id: PBO:0054020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1350","termid":"PBO:0054020"}


id: MOD:00295
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-octanoyl-L-serine.","definition_xrefs":["PubMed:12716131","Unimod:426#S","PubMed:10604470","RESID:AA0290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-octanoylated residue","termid":"MOD:00669"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-octanoyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(octanoyloxy)propanoic acid","type":"exact"},{"name":"L-serine octanoate ester","type":"exact"},{"name":"LIPID O-octanoyl serine","type":"exact"},{"name":"O-octanoyl-L-serine","type":"exact"},{"name":"O-octanoylated L-serine","type":"exact"},{"name":"O3-octanoyl-L-serine","type":"exact"},{"name":"OOctSer","type":"exact"},{"name":"Octanoyl","type":"related"},{"name":"octanoyl","type":"related"}],"termid":"MOD:00295"}


id: PATO:0002173
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning towards an additional entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"misaligned with","termid":"PATO:0001654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misaligned towards","termid":"PATO:0002173"}


id: PR:Q92359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf4 gene.","definition_xrefs":["UniProtKB:Q92359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein C6G9.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.14","synonyms":[{"name":"Spom972h-puf4","type":"exact"}],"termid":"PR:Q92359"}


id: PBO:0058374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4746","termid":"PBO:0058374"}


id: PBO:0049645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.Y histone 1","termid":"PBO:0049645"}


id: FYPO:0007099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the lengthening of the distance between poles of the meiotic spindle that occurs as part of the first meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000257"],"is_obsolete":false,"name":"normal spindle elongation in meiosis I","synonyms":[{"name":"normal meiotic spindle elongation in first meiotic nuclear division","type":"exact"},{"name":"normal meiotic spindle elongation in meiosis I","type":"exact"}],"termid":"FYPO:0007099"}


id: PBO:0084732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane transporter; transports oxaloacetate, sulfate, thiosulfate, and isopropylmalate; member of the mitochondrial carrier family","termid":"PBO:0084732"}


id: PBO:0029828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division,_with_elongated_germ_tube","termid":"PBO:0029828"}


id: PBO:0063460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor subunit B","termid":"PBO:0063460"}


id: PBO:0045789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epididymal protein 3D, pseudogene","termid":"PBO:0045789"}


id: PBO:0081695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 618","termid":"PBO:0081695"}


id: PBO:0057111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 199b","termid":"PBO:0057111"}


id: PBO:0073876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 4","termid":"PBO:0073876"}


id: GO:1990246
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A calcium channel complex in the mitochondrial inner membrane capable of highly-selective calcium channel activity. Its components include the EF-hand-containing proteins mitochondrial calcium uptake 1 (MICU1) and MICU2, the pore-forming subunit mitochondrial calcium uniporter (MCU) and its paralog MCUb, and the MCU regulator EMRE.","definition_xrefs":["PMID:24231807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel complex","termid":"GO:0034704"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"uniplex complex","synonyms":[{"name":"mitochondrial uniporter complex","type":"exact"},{"name":"mitochondrial uniporter holocomplex","type":"exact"}],"termid":"GO:1990246"}


id: GO:0009069
data:
  {"annotated_genes":["SJAG_00582","SJAG_03152","SJAG_03671","SJAG_00830","SJAG_04964","SJAG_01271","SJAG_02313","SJAG_00395","SJAG_02290","SJAG_00283","SJAG_02972","SJAG_02450","SJAG_03914","SJAG_01880","SJAG_00881","SJAG_03641","SJAG_03290","SJAG_03102","SJAG_03861","SJAG_04305","SJAG_02791","SJAG_04449","SJAG_05413","SJAG_03556","SJAG_01766","SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[105550,91600,97988,106597,92997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[90307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[87403,90589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[93973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006546"},{"annotations":[92510,84805,83564,109125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[102071,108059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[97989,107179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009092"},{"annotations":[106598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[96767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[110036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[96364,88315,106233,112996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"},{"annotations":[99880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006565"},{"annotations":[87351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006563"},{"annotations":[108797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016259"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_00395":null,"SJAG_00582":null,"SJAG_00830":null,"SJAG_00881":null,"SJAG_01271":null,"SJAG_01766":null,"SJAG_01880":null,"SJAG_02290":null,"SJAG_02313":null,"SJAG_02450":null,"SJAG_02791":null,"SJAG_02901":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03152":null,"SJAG_03290":null,"SJAG_03556":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_04305":null,"SJAG_04449":null,"SJAG_04964":null,"SJAG_05413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"serine family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"serine family amino acid metabolism","type":"exact"}],"termid":"GO:0009069","terms_by_termid":{"GO:0006535":null,"GO:0006545":null,"GO:0006546":null,"GO:0006563":null,"GO:0006564":null,"GO:0006565":null,"GO:0009090":null,"GO:0009092":null,"GO:0016259":null,"GO:0019264":null,"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0019344":null,"GO:0019464":null,"GO:0071269":null}}


id: PBO:0000241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex subunit Mod21","termid":"PBO:0000241"}


id: PBO:0050675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 2","termid":"PBO:0050675"}


id: GO:0021557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the oculomotor nerve over time, from its formation to the mature structure. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","GO_REF:0000021","ISBN:0838580343","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve development","synonyms":[{"name":"CN III development","type":"related"},{"name":"cranial nerve 3 development","type":"exact"},{"name":"cranial nerve III development","type":"exact"}],"termid":"GO:0021557"}


id: GO:0002371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a dendritic cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production involved in immune response","termid":"GO:0002367"},{"relation_name":"is_a","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"dendritic cell cytokine production","termid":"GO:0002371"}


id: PBO:0091461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi3","termid":"PBO:0091461"}


id: GO:0015706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nitrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"},{"relation_name":"is_a","term_name":"nitrate import","termid":"GO:1902025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nitrate transmembrane transport","secondary_identifiers":["GO:0080055","GO:0006872"],"synonyms":[{"name":"low affinity nitrate transport","type":"narrow"},{"name":"low-affinity nitrate transport","type":"narrow"},{"name":"nitrate transport","type":"broad"}],"termid":"GO:0015706"}


id: PBO:0042412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 25B","termid":"PBO:0042412"}


id: PR:Q9C0Z3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slx9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Z3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein slx9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB21F2.03","synonyms":[{"name":"Spom972h-slx9","type":"exact"}],"termid":"PR:Q9C0Z3"}


id: PBO:0082120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase; catalyzes trichothecene 3-O-acetylation, suggesting a possible role in trichothecene biosynthesis","termid":"PBO:0082120"}


id: GO:0006905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicle transport (obsolete GO:0006905)","synonyms":[{"name":"vesicle transport","type":"exact"}],"termid":"GO:0006905"}


id: PATO:0000880
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000880 fertility value (obsolete PATO:0000880)","termid":"PATO:0000880"}


id: PBO:0067284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 366, pseudogene","termid":"PBO:0067284"}


id: GO:1904902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an ESCRT III complex.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:20588296","GOC:pad","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex assembly","termid":"GO:1904895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"ESCRT III complex assembly","synonyms":[{"name":"ESCRT III complex formation","type":"exact"}],"termid":"GO:1904902"}


id: PBO:0054824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2237","termid":"PBO:0054824"}


id: PBO:0079121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific 10 interacting protein","termid":"PBO:0079121"}


id: PBO:0034456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_inositol_phosphate_phosphatase_activity","termid":"PBO:0034456"}


id: PBO:0083906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flavin-linked sulfhydryl oxidase localized to the ER lumen; involved in disulfide bond formation within the endoplasmic reticulum (ER)","termid":"PBO:0083906"}


id: GO:1905680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of innate immunity memory response.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"innate immunity memory response","termid":"GO:0090714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of innate immunity memory response","termid":"GO:1905680"}


id: GO:0010432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the bract over time, from its formation to the mature structure. A bract is a leaf, usually different in form from the foliage leaves, subtending a flower or inflorescence.","definition_xrefs":["PO:0009055","PMID:16554366","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bract development","termid":"GO:0010432"}


id: PBO:0053403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 333","termid":"PBO:0053403"}


id: GO:0071169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a part of a chromosome that is organized into chromatin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to chromosome","termid":"GO:0070199"},{"relation_name":"is_a","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to chromatin","synonyms":[{"name":"establishment of protein localisation to chromatin","type":"exact"}],"termid":"GO:0071169"}


id: PBO:0061854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin 4","termid":"PBO:0061854"}


id: PBO:0065076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 3","termid":"PBO:0065076"}


id: SO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif comprising two helices separated by a turn.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"has_part","term_name":"peptide_helix","termid":"SO:0001114"},{"relation_name":"has_part","term_name":"polypeptide_turn_motif","termid":"SO:0001128"},{"relation_name":"is_a","term_name":"polypeptide_structural_motif","termid":"SO:0001079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"helix_turn_helix","secondary_identifiers":["BS:00147"],"synonyms":[{"name":"HTH","type":"related"},{"name":"helix turn helix","type":"exact"},{"name":"helix-turn-helix","type":"exact"}],"termid":"SO:0001081"}


id: GO:0001842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural fold is formed. The edges of the neural plate thicken and move up to form a U-shaped structure called the neural groove.","definition_xrefs":["GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"primary neural tube formation","termid":"GO:0014020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural fold formation","synonyms":[{"name":"neural groove formation","type":"related"}],"termid":"GO:0001842"}


id: PBO:0057626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1200","termid":"PBO:0057626"}


id: PBO:0054089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1442","termid":"PBO:0054089"}


id: PBO:0045219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC8 pseudogene 4","termid":"PBO:0045219"}


id: GO:0003943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 4-sulfate groups of the N-acetyl-D-galactosamine 4-sulfate units of chondroitin sulfate and dermatan sulfate.","definition_xrefs":["EC:3.1.6.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"N-acetylgalactosamine-4-sulfatase activity","secondary_identifiers":["Reactome:R-HSA-9036065","Wikipedia:Arylsulfatase_B","MetaCyc:3.1.6.12-RXN","Reactome:R-HSA-1606789","Reactome:R-HSA-1793207","Reactome:R-HSA-2282889"],"synonyms":[{"name":"N-acetyl-D-galactosamine-4-sulfate 4-sulfohydrolase activity","type":"related"},{"name":"N-acetylgalactosamine 4-sulfate sulfohydrolase activity","type":"related"},{"name":"N-acetylgalactosamine-4-sulphatase activity","type":"exact"},{"name":"acetylgalactosamine 4-sulfatase activity","type":"related"},{"name":"arylsulfatase B","type":"exact"},{"name":"chondroitinsulfatase","type":"broad"}],"termid":"GO:0003943"}


id: GO:0051736
data:
  {"annotated_genes":["SJAG_01791"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89566],"is_not":false,"summary":null,"term":"GO:0051736"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5'-dephospho-RNA = ADP + 5'-phospho-RNA.","definition_xrefs":["RHEA:54580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent polynucleotide 5'-hydroxyl-kinase activity","termid":"GO:0051734"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent RNA kinase activity","type":"exact"},{"name":"ATP-dependent polyribonucleotide kinase activity","type":"exact"},{"name":"polyribonucleotide 5'-hydroxyl-kinase activity","type":"broad"}],"termid":"GO:0051736","terms_by_termid":{"GO:0051736":null}}


id: PBO:0044791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 4","termid":"PBO:0044791"}


id: GO:0047529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-2,3-dimethylmalate = propanoate + pyruvate.","definition_xrefs":["EC:4.1.3.32","RHEA:10472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2,3-dimethylmalate lyase activity","secondary_identifiers":["KEGG_REACTION:R01355","MetaCyc:23-DIMETHYLMALATE-LYASE-RXN"],"synonyms":[{"name":"(2R,3S)-2,3-dimethylmalate pyruvate-lyase (propanoate-forming)","type":"related"},{"name":"(2R,3S)-2,3-dimethylmalate pyruvate-lyase activity","type":"related"},{"name":"2,3-dimethylmalate pyruvate-lyase activity","type":"related"}],"termid":"GO:0047529"}


id: GO:0051141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer T cell proliferation.","definition_xrefs":["ISBN:0781735149","PMID:9133426","PMID:12154375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell proliferation","termid":"GO:0046642"},{"relation_name":"is_a","term_name":"negative regulation of NK T cell activation","termid":"GO:0051134"},{"relation_name":"is_a","term_name":"regulation of NK T cell proliferation","termid":"GO:0051140"},{"relation_name":"negatively_regulates","term_name":"NK T cell proliferation","termid":"GO:0001866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of NK T cell proliferation","synonyms":[{"name":"down regulation of NK T cell proliferation","type":"exact"},{"name":"down-regulation of NK T cell proliferation","type":"exact"},{"name":"downregulation of NK T cell proliferation","type":"exact"},{"name":"inhibition of NK T cell proliferation","type":"narrow"},{"name":"negative regulation of NK T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of NK T-cell proliferation","type":"exact"},{"name":"negative regulation of NK T-lymphocyte proliferation","type":"exact"},{"name":"negative regulation of NKT cell proliferation","type":"exact"},{"name":"negative regulation of NT cell proliferation","type":"exact"},{"name":"negative regulation of natural T cell proliferation","type":"exact"},{"name":"negative regulation of natural killer T cell proliferation","type":"exact"}],"termid":"GO:0051141"}


id: PBO:0088866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase Mtd1","termid":"PBO:0088866"}


id: GO:0047679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine = D-arginine.","definition_xrefs":["EC:5.1.1.9","MetaCyc:ARGININE-RACEMASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"arginine racemase activity","secondary_identifiers":["RHEA:18069"],"termid":"GO:0047679"}


id: PBO:0082019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZXD family zinc finger C","termid":"PBO:0082019"}


id: PBO:0049035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 22","termid":"PBO:0049035"}


id: CHEBI:46442
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vanadate(3-)","termid":"CHEBI:46442"}


id: PBO:0058319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4692","termid":"PBO:0058319"}


id: GO:0018724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-phenanthrol + X-SO3(-) = HX + 4-phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-phenanthrol sulfotransferase activity (obsolete GO:0018724)","synonyms":[{"name":"4-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018724"}


id: PBO:0034464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_vacuole","termid":"PBO:0034464"}


id: FYPO:0006936
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to plasma membrane during vegetative growth","termid":"FYPO:0002126"},{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane at cell division site during vegetative growth","termid":"FYPO:0005544"},{"relation_name":"is_a","term_name":"abolished protein localization to cell periphery during vegetative growth","termid":"FYPO:0005571"},{"relation_name":"is_a","term_name":"abolished protein localization to membrane during vegetative growth","termid":"FYPO:0005757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane at cell division site during vegetative growth","synonyms":[{"name":"abolished protein localisation to plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abolished protein localization in plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell membrane at cell division site during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during mitotic cell cycle","type":"related"},{"name":"protein localization to plasma membrane at cell division site abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006936"}


id: GO:0033058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another along an axis.","definition_xrefs":["GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"directional locomotion","termid":"GO:0033058"}


id: PBO:0088142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar RNase of the T(2) family; relocalizes to the cytosol where it cleaves tRNAs upon oxidative or stationary phase stress; required for tRNA-specific translational pausing during oxidative stress; promotes apoptosis under stress conditions and this function is independent of Rny1p catalytic activity","termid":"PBO:0088142"}


id: PBO:0004791
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.9","termid":"PBO:0004791"}


id: GO:0098035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites by a viral terminase.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome packaging","termid":"GO:0019073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral DNA genome packaging via site-specific sequence recognition","termid":"GO:0098035"}


id: GO:0075064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont invasive hypha formation within host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation invasive hypha growth (obsolete GO:0075064)","synonyms":[{"name":"negative regulation of symbiont invasive hypha formation in host","type":"exact"},{"name":"negative regulation of symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0075064"}


id: GO:0045345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of MHC class I biosynthetic process","termid":"GO:0045343"},{"relation_name":"positively_regulates","term_name":"MHC class I biosynthetic process","termid":"GO:0045341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of MHC class I biosynthetic process","synonyms":[{"name":"activation of MHC class I biosynthetic process","type":"narrow"},{"name":"positive regulation of MHC class I anabolism","type":"exact"},{"name":"positive regulation of MHC class I biosynthesis","type":"exact"},{"name":"positive regulation of MHC class I formation","type":"exact"},{"name":"positive regulation of MHC class I synthesis","type":"exact"},{"name":"positive regulation of major histocompatibility complex class I biosynthesis","type":"exact"},{"name":"positive regulation of major histocompatibility complex class I biosynthetic process","type":"exact"},{"name":"stimulation of MHC class I biosynthetic process","type":"narrow"},{"name":"up regulation of MHC class I biosynthetic process","type":"exact"},{"name":"up-regulation of MHC class I biosynthetic process","type":"exact"},{"name":"upregulation of MHC class I biosynthetic process","type":"exact"}],"termid":"GO:0045345"}


id: GO:0106297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of resolvin family E-series, hydroxy fatty acids derived from icosapentaenoic acid.","definition_xrefs":["PMID:21206090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resolvin biosynthetic process","termid":"GO:0106295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"E-series resolvin biosynthetic process","termid":"GO:0106297"}


id: PBO:0090420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 Cyb502","termid":"PBO:0090420"}


id: PBO:0043278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member A","termid":"PBO:0043278"}


id: PR:Q09749
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adiponectin receptor protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03283","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADIPOR-like receptor SPBC12C2.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.09c","secondary_identifiers":["UniProtKB:Q09749"],"synonyms":[{"name":"Spom972h-ADIPOR2","type":"exact"}],"termid":"PR:Q09749"}


id: PBO:0090293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol phosphate phosphatase Gep4","termid":"PBO:0090293"}


id: PBO:0041123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 6 pseudogene 1","termid":"PBO:0041123"}


id: PBO:0089091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCHC type zinc finger protein, human ZCCHC9 ortholog, implicated in mRNA splicing","termid":"PBO:0089091"}


id: PATO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001129 relative work value (obsolete PATO:0001129)","termid":"PATO:0001129"}


id: PBO:0030704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_CCCP","termid":"PBO:0030704"}


id: GO:1902883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to oxidative stress.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000058","PMID:16899554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to oxidative stress","termid":"GO:1902882"},{"relation_name":"negatively_regulates","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to oxidative stress","synonyms":[{"name":"down regulation of response to oxidative stress","type":"exact"},{"name":"down-regulation of response to oxidative stress","type":"exact"},{"name":"downregulation of response to oxidative stress","type":"exact"},{"name":"inhibition of response to oxidative stress","type":"narrow"}],"termid":"GO:1902883"}


id: PBO:0049453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GXYLT1 pseudogene 7","termid":"PBO:0049453"}


id: GO:0062246
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by an exocytic vesicle.","definition_xrefs":["PMID:27384577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle lumen","termid":"GO:0098566"},{"relation_name":"part_of","term_name":"exocytic vesicle","termid":"GO:0070382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"exocytic vesicle lumen","termid":"GO:0062246"}


id: PBO:0113173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Invertase; sucrose hydrolyzing enzyme; seven closely related but non-identical invertase genes have been described in yeast (SUC1-5, 7, 8) but only SUC2 is in the reference strain (S288C); mapped to -152.0 cM on chrIV","termid":"PBO:0113173"}


id: GO:0019953
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id: GO:2000228
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic A cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of pancreatic A cell differentiation","termid":"GO:2000226"},{"relation_name":"positively_regulates","term_name":"pancreatic A cell differentiation","termid":"GO:0003310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic A cell differentiation","synonyms":[{"name":"positive regulation of pancreatic alpha cell differentiation","type":"exact"}],"termid":"GO:2000228"}


id: PBO:0046536
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group 9 member 1","termid":"PBO:0046536"}


id: GO:0070327
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of thyroid hormone into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone transport","termid":"GO:0009914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"thyroid hormone transport","synonyms":[{"name":"thyroxine transport","type":"narrow"},{"name":"triiodothyronine transport","type":"narrow"}],"termid":"GO:0070327"}


id: PBO:0026904
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_gamma-tubulin_complex_localization_to_mitotic_spindle_pole_body","termid":"PBO:0026904"}


id: GO:0052923
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + 7 isopentenyl diphosphate = 7 diphosphate + all-trans-nonaprenyl diphosphate.","definition_xrefs":["RHEA:27563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity","secondary_identifiers":["KEGG_REACTION:R07267","MetaCyc:TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN","GO:0050347","KEGG_REACTION:R09250","EC:2.5.1.84"],"synonyms":[{"name":"(E)-octaprenyl-diphosphate:isopentenyl-diphosphate octaprenyltranstransferase activity","type":"related"},{"name":"SPP synthase activity","type":"broad"},{"name":"SPP-synthase activity","type":"broad"},{"name":"all-trans-nonaprenyl-diphosphate synthase activity","type":"related"},{"name":"nonaprenyl diphosphate synthase activity","type":"broad"},{"name":"nonaprenyl pyrophosphate synthetase activity","type":"related"},{"name":"polyprenylpyrophosphate synthetase activity","type":"related"},{"name":"solPP synthase activity","type":"broad"},{"name":"solanesyl diphosphate synthetase activity","type":"broad"},{"name":"solanesyl pyrophosphate synthetase activity","type":"related"},{"name":"solanesyl-diphosphate synthase activity","type":"related"},{"name":"terpenoidallyltransferase activity","type":"related"},{"name":"terpenyl pyrophosphate synthetase activity","type":"related"},{"name":"trans-octaprenyltranstransferase activity","type":"related"},{"name":"trans-prenyltransferase activity","type":"related"}],"termid":"GO:0052923"}


id: PBO:0047471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular dendritic cell secreted protein","termid":"PBO:0047471"}


id: GO:0102777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: anthocyanidin 3,5-di-O-beta-D-glucoside + caffeoyl-CoA = pelargonidin-3,5-diglucoside-5-O-caffeoylglucoside + coenzyme A(4-).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete caffeoyl-CoA:pelargonidin-3,5-diglucoside 5-O-glucoside-6-O-hydroxycinnamoyltransferase activity (obsolete GO:0102777)","termid":"GO:0102777"}


id: PBO:0047098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 151 member A","termid":"PBO:0047098"}


id: SO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet consisting of two H-bonds in which: the main-chain NH of residue(i) is H-bonded to the main-chain CO of residue(i+4), the main-chain CO of residue i is H-bonded to the main-chain NH of residue(i+3), these loops have an RL nest at residues i+2 and i+3.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_bulge_loop","termid":"SO:0001108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge_loop_five","secondary_identifiers":["BS:00210"],"synonyms":[{"name":"beta bulge loop five","type":"exact"}],"termid":"SO:0001109"}


id: PBO:0078910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 1-1","termid":"PBO:0078910"}


id: GO:0030561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of 2'-O-ribose methylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"RNA 2'-O-ribose methylation guide activity","termid":"GO:0030561"}


id: GO:0000448
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  {"annotated_genes":["SJAG_02275","SJAG_02374","SJAG_01581","SJAG_03789"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87793,91060,100215,114621],"is_not":false,"summary":null,"term":"GO:0000448"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage within ITS2 between the 5.8S rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01581":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000490"],"synonyms":[{"name":"cleavage at C2","type":"related"},{"name":"cleavage in ITS2 of tricistronic rRNA transcript to separate 5.8S and LSU rRNAs (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","type":"exact"}],"termid":"GO:0000448","terms_by_termid":{"GO:0000448":null}}


id: PATO:0002202
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Handedness where the organism preferentially uses the left hand or foot for tasks requiring the use of a single hand or foot or a dominant hand or foot.","definition_xrefs":["birnlex:2038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"handedness","termid":"PATO:0002201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"left handedness","termid":"PATO:0002202"}


id: MOD:00776
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"An artifactual protein modification that converts an L-histidine residue to L-aspartic acid by oxidative degradation.","definition_xrefs":["OMSSA:55","Unimod:349","PubMed:9252331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-aspartic acid residue","termid":"MOD:00013"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid (His)","synonyms":[{"name":"His->Asp","type":"related"},{"name":"his2asph","type":"exact"},{"name":"histidine oxidation to aspartic acid","type":"related"}],"termid":"MOD:00776"}


id: PBO:0039904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac/Cdc42 guanine nucleotide exchange factor 6","termid":"PBO:0039904"}


id: PBO:0088461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein Nca2","termid":"PBO:0088461"}


id: PBO:0063841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase alpha","termid":"PBO:0063841"}


id: PBO:0083692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme regulator; involved in synthesis of phosphatidylinositol 3,5-bisphosphate, in control of trafficking of some proteins to the vacuole lumen via the MVB, and in maintenance of vacuole size and acidity; binds negative (Fig4p) and positive (Fab1p) regulators of PtdIns(3,5)P(2) to control endolysosome function; similar to mammalian Vac14p","termid":"PBO:0083692"}


id: PBO:0004397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ste13","termid":"PBO:0004397"}


id: PBO:0012565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase Aca1","termid":"PBO:0012565"}


id: GO:0071644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of chemokine (C-C motif) ligand 4.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 4 production","termid":"GO:0071643"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-C motif) ligand 4 production","termid":"GO:0071606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemokine (C-C motif) ligand 4 production","synonyms":[{"name":"negative regulation of CCL4 production","type":"exact"},{"name":"negative regulation of MIP-1b production","type":"exact"},{"name":"negative regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071644"}


id: PBO:0074857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 45A","termid":"PBO:0074857"}


id: PR:O94298
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sur2 gene.","definition_xrefs":["UniProtKB:O94298","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingolipid C4-hydroxylase sur2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.15c","synonyms":[{"name":"Spom972h-sur2","type":"exact"},{"name":"syringomycin response protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94298"}


id: PBO:0088959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex actin-related protein subunit Arp3","termid":"PBO:0088959"}


id: GO:0097134
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin E1 and cyclin-dependent kinase 2 (CDK2). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin E1-CDK2 complex","termid":"GO:0097134"}


id: GO:0071532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an ankyrin repeat of a protein. Ankyrin repeats are tandemly repeated modules of about 33 amino acids; each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90-degree angle, and repeats stack to form an L-shaped structure.","definition_xrefs":["InterPro:IPR002110","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ankyrin repeat binding","synonyms":[{"name":"ANK repeat binding","type":"exact"}],"termid":"GO:0071532"}


id: GO:0044353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded, uncoated intracellular vesicle formed by the process of micropinocytosis.","definition_xrefs":["PMID:14731589","PMID:14732047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinosome","termid":"GO:0044352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005768","GO:0005575"],"is_obsolete":false,"name":"micropinosome","termid":"GO:0044353"}


id: MOD:00016
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-glutamine.","definition_xrefs":["DeltaMass:0","ChEBI:30011","PubMed:6692818","PubMed:3340166","PubMed:9342308","RESID:AA0007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 128.058578 Da","termid":"MOD:00894"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamine residue","synonyms":[{"name":"(2S)-2-amino-5-pentanediamic acid","type":"exact"},{"name":"2,5-bis(azanyl)-5-oxopentanoic acid","type":"exact"},{"name":"2,5-diamino-5-oxopentanoic acid","type":"exact"},{"name":"2-amino-4-carbamoylbutanoic acid","type":"exact"},{"name":"2-aminoglutaramic acid","type":"exact"},{"name":"Gln","type":"exact"},{"name":"L-glutamine","type":"exact"},{"name":"alpha-amino-gamma-carbamylbutyric acid","type":"exact"},{"name":"glutamic acid 5-amide","type":"exact"},{"name":"glutamic acid gamma-amide","type":"exact"},{"name":"glutamide","type":"exact"}],"termid":"MOD:00016"}


id: GO:1902637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neural crest cell differentiation that is involved in thymus development.","definition_xrefs":["GOC:TermGenie","PMID:15741317","GOC:nhn","GO_REF:0000060","PMID:18292542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell differentiation","termid":"GO:0014033"},{"relation_name":"part_of","term_name":"thymus development","termid":"GO:0048538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell differentiation involved in thymus development","termid":"GO:1902637"}


id: PBO:0069543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 813, pseudogene","termid":"PBO:0069543"}


id: PBO:0085710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in splicing Group I aI5-beta intron from COX1 mRNA; mitochondrial matrix protein","termid":"PBO:0085710"}


id: GO:0017143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving insecticides, chemicals used to kill insects.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"},{"relation_name":"part_of","term_name":"response to insecticide","termid":"GO:0017085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"insecticide metabolic process","secondary_identifiers":["GO:0017138"],"synonyms":[{"name":"insecticide metabolism","type":"exact"}],"termid":"GO:0017143"}


id: PR:P40899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- isp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process protein isp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.05","synonyms":[{"name":"Spom972h-isp3","type":"exact"},{"name":"meiotic expression up-regulated protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40899"}


id: MOD:00177
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-argininine residue to omega-N-(ADP-ribosyl)-L-arginine.","definition_xrefs":["DeltaMass:0","PubMed:15842200","PubMed:209022","PubMed:3923473","Unimod:213#R","RESID:AA0168","PubMed:3090031","PubMed:6582062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omega-N-(ADP-ribosyl)-L-arginine","synonyms":[{"name":"(S)-2-amino-5-([imino([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]amino)methyl]amino)pentanoic acid","type":"exact"},{"name":"ADP Ribose addition","type":"related"},{"name":"ADP-Ribosyl","type":"related"},{"name":"ADPRibArg","type":"exact"},{"name":"MOD_RES ADP-ribosylarginine","type":"exact"},{"name":"N(omega)-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-arginine","type":"exact"},{"name":"N(omega)-alpha-D-ribofuranosyl-L-arginine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"},{"name":"N-(ADP-ribosyl)- (on Arginine)","type":"exact"},{"name":"omega-N-(ADP-ribosyl)-L-arginine","type":"exact"}],"termid":"MOD:00177"}


id: PBO:0041990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 34","termid":"PBO:0041990"}


id: PBO:0075271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 24","termid":"PBO:0075271"}


id: GO:0052138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis on or near host (obsolete GO:0052138)","termid":"GO:0052138"}


id: GO:0106095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex that catalyzes the reaction: 7-methylguanosine-5'-triphospho-5'-pholynucleotide + H20 = 7-methylguanosine-5'-phosphate + polynucleotide.","definition_xrefs":["GOC:lnp","PMID:26258763","PMID:22985415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase complex","termid":"GO:1903293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"m7G(5')pppN diphosphatase complex","synonyms":[{"name":"7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase enzyme","type":"exact"},{"name":"DCS1 decapping scavenger complex","type":"exact"},{"name":"M(7)G(5')pppN pyrophosphatase enzyme","type":"exact"},{"name":"m7G(5')pppN diphosphatase enzyme","type":"exact"},{"name":"m7G(5')pppN pyrophosphatase enzyme","type":"exact"}],"termid":"GO:0106095"}


id: GO:0007091
data:
  {"annotated_genes":["SJAG_01956","SJAG_01297","SJAG_04126","SJAG_01330","SJAG_01082","SJAG_00883","SJAG_01805","SJAG_04699","SJAG_02451","SJAG_01679","SJAG_00666","SJAG_04573","SJAG_04968","SJAG_01837","SJAG_04999","SJAG_02336","SJAG_04259","SJAG_03048","SJAG_05329","SJAG_02169","SJAG_03353","SJAG_02498","SJAG_02380","SJAG_04884","SJAG_03126","SJAG_03681","SJAG_03575"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86461,97933,109225],"is_not":false,"summary":null,"term":"GO:0007091"},{"annotations":[109879,95685,111987,99995,108051,110359,103323,104345,86834],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[95533,86836,97895,102398,110588,112765,111636,106000,109883],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[102399,111637],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045841"},{"annotations":[90303],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112769],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[93806,96237,89906,110360,98208,98483,110857,107463],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[90304],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.","definition_xrefs":["PMID:10465783","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle phase transition","termid":"GO:0044772"},{"relation_name":"is_a","term_name":"metaphase/anaphase transition of cell cycle","termid":"GO:0044784"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01956":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03575":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044772"],"is_obsolete":false,"name":"metaphase/anaphase transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"metaphase/anaphase transition by anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"mitotic metaphase/anaphase transition","type":"exact"}],"termid":"GO:0007091","terms_by_termid":{"GO:0007091":null,"GO:0007094":null,"GO:0045841":null,"GO:0045842":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: GO:1903199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-dopa decarboxylase activity.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000059","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lyase activity","termid":"GO:0051350"},{"relation_name":"is_a","term_name":"regulation of L-dopa decarboxylase activity","termid":"GO:1903198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of L-dopa decarboxylase activity","synonyms":[{"name":"down regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"down regulation of DDC activity","type":"exact"},{"name":"down regulation of DOPA decarboxylase activity","type":"exact"},{"name":"down regulation of L-dopa decarboxylase activity","type":"exact"},{"name":"down-regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"down-regulation of DDC activity","type":"exact"},{"name":"down-regulation of DOPA decarboxylase activity","type":"exact"},{"name":"down-regulation of L-dopa decarboxylase activity","type":"exact"},{"name":"downregulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"downregulation of DDC activity","type":"exact"},{"name":"downregulation of DOPA decarboxylase activity","type":"exact"},{"name":"downregulation of L-dopa decarboxylase activity","type":"exact"},{"name":"inhibition of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"narrow"},{"name":"inhibition of DDC activity","type":"narrow"},{"name":"inhibition of DOPA decarboxylase activity","type":"narrow"},{"name":"inhibition of L-dopa decarboxylase activity","type":"narrow"},{"name":"negative regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"negative regulation of DDC activity","type":"exact"},{"name":"negative regulation of DOPA decarboxylase activity","type":"exact"}],"termid":"GO:1903199"}


id: FYPO:0007837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at subtelomeric regions. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:31837996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in heterochromatin","termid":"FYPO:0000855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased nucleosome occupancy at subtelomere","synonyms":[{"name":"decreased nucleosome occupancy at subtelomere during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at subtelomere during vegetative growth","type":"exact"},{"name":"reduced nucleosome occupancy at subtelomere","type":"exact"}],"termid":"FYPO:0007837"}


id: PBO:0066590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member D","termid":"PBO:0066590"}


id: GO:0046697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta.","definition_xrefs":["PMID:11133685","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"maternal placenta development","termid":"GO:0001893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"decidualization","secondary_identifiers":["Wikipedia:Decidualization"],"synonyms":[{"name":"decidual cell reaction","type":"exact"}],"termid":"GO:0046697"}


id: GO:0032651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-1 beta production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"regulates","term_name":"interleukin-1 beta production","termid":"GO:0032611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-1 beta production","secondary_identifiers":["GO:0050722","GO:0050706"],"synonyms":[{"name":"regulation of IL-1 beta production","type":"exact"},{"name":"regulation of interleukin-1 beta biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-1 beta secretion","type":"narrow"}],"termid":"GO:0032651"}


id: PBO:0062276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 7 pseudogene","termid":"PBO:0062276"}


id: PBO:0040386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit B1","termid":"PBO:0040386"}


id: PBO:0028380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_hypoxanthine_DNA_N-glycosylase_activity","termid":"PBO:0028380"}


id: PBO:0077514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM230 pseudogene 2","termid":"PBO:0077514"}


id: GO:1902744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lamellipodium organization.","definition_xrefs":["GOC:als","PMID:16054028","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of lamellipodium organization","termid":"GO:1902743"},{"relation_name":"negatively_regulates","term_name":"lamellipodium organization","termid":"GO:0097581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lamellipodium organization","synonyms":[{"name":"down regulation of lamellipodium organization","type":"exact"},{"name":"down-regulation of lamellipodium organization","type":"exact"},{"name":"downregulation of lamellipodium organization","type":"exact"},{"name":"inhibition of lamellipodium organization","type":"narrow"}],"termid":"GO:1902744"}


id: PBO:0034521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomeric_DNA_separation","termid":"PBO:0034521"}


id: PBO:0059677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 43","termid":"PBO:0059677"}


id: PBO:0005841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate kinase Tmp1","termid":"PBO:0005841"}


id: GO:0103074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD + D-glucopyranose 6-phosphate = NADH + H+ + 3-dehydro-D-glucose 6-phosphate.","definition_xrefs":["GOC:pz","RHEA:37547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glucose-6-phosphate 3-dehydrogenase activity","secondary_identifiers":["EC:1.1.1.361","MetaCyc:RXN8J2-136"],"termid":"GO:0103074"}


id: PBO:0068931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 174, pseudogene","termid":"PBO:0068931"}


id: GO:0120028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of osmosensory signaling pathway.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of osmosensory signaling pathway (obsolete GO:0120028)","termid":"GO:0120028"}


id: PBO:0047698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLYWCH-type zinc finger 1 pseudogene 1","termid":"PBO:0047698"}


id: GO:0070072
data:
  {"annotated_genes":["SJAG_06514","SJAG_04454","SJAG_00301","SJAG_05306","SJAG_01939"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98084,106256,109217,110284,114382],"is_not":false,"summary":null,"term":"GO:0070072"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a vacuolar proton-transporting V-type ATPase complex, proton-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of protons across the vacuolar membrane.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase complex assembly","termid":"GO:0070070"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_01939":null,"SJAG_04454":null,"SJAG_05306":null,"SJAG_06514":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"V-ATPase assembly","type":"broad"},{"name":"V-ATPase complex assembly","type":"broad"}],"termid":"GO:0070072","terms_by_termid":{"GO:0070072":null}}


id: PBO:0109609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A24","termid":"PBO:0109609"}


id: GO:0035476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of angioblasts, cells involved in blood vessel morphogenesis.","definition_xrefs":["GOC:dgh","PMID:19815777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angioblast cell migration","termid":"GO:0035476"}


id: PBO:0088010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p; shuttles between cytosol and nucleus; mediates delivery of misfolded proteins into the nucleus for degradation; involved in proteasomal degradation of misfolded cytosolic proteins; protein abundance increases in response to DNA replication stress; polyQ aggregates sequester Sis1p and interfere with clearance of misfolded proteins; similar to bacterial DnaJ proteins and mammalian DnaJB1","termid":"PBO:0088010"}


id: PBO:0031879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glycine transporter Hem25 (predicted)","termid":"PBO:0031879"}


id: PBO:0052627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 6A","termid":"PBO:0052627"}


id: GO:1902258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:dph","GOC:mtg_apoptosis","PMID:16839542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in outflow tract morphogenesis","termid":"GO:1902256"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in morphogenesis","termid":"GO:1902339"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in outflow tract morphogenesis","termid":"GO:0003275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in outflow tract morphogenesis","synonyms":[{"name":"activation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"activation of apoptotic process involved in outflow tract morphogenesis","type":"narrow"},{"name":"positive regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"up regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"up regulation of apoptotic process involved in outflow tract morphogenesis","type":"exact"},{"name":"up-regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"up-regulation of apoptotic process involved in outflow tract morphogenesis","type":"exact"},{"name":"upregulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"upregulation of apoptotic process involved in outflow tract morphogenesis","type":"exact"}],"termid":"GO:1902258"}


id: PBO:0029098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_sulfate_sulfur_source","termid":"PBO:0029098"}


id: PBO:0018276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus4 (predicted)","termid":"PBO:0018276"}


id: PBO:0030170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_strand_displacement","termid":"PBO:0030170"}


id: GO:0043039
data:
  {"annotated_genes":["SJAG_05560","SJAG_03071","SJAG_01159","SJAG_02517","SJAG_02015","SJAG_16456","SJAG_01522","SJAG_04473","SJAG_01197","SJAG_04738","SJAG_00243","SJAG_02721","SJAG_01352","SJAG_04094","SJAG_02615","SJAG_03626","SJAG_01259","SJAG_01577","SJAG_04482","SJAG_00488","SJAG_04840","SJAG_02236","SJAG_04762","SJAG_01797","SJAG_00443","SJAG_03545","SJAG_01235","SJAG_02206","SJAG_03585","SJAG_04285","SJAG_00653","SJAG_02428","SJAG_00420","SJAG_04409","SJAG_02977","SJAG_00103","SJAG_03277","SJAG_02263","SJAG_04856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98369,101150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006421"},{"annotations":[110142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006422"},{"annotations":[91678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006423"},{"annotations":[89819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990762"},{"annotations":[100751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061475"},{"annotations":[105387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006425"},{"annotations":[114461,92767,107377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070681"},{"annotations":[86439,97553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006424"},{"annotations":[93115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006426"},{"annotations":[104461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006427"},{"annotations":[112135,108733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006428"},{"annotations":[94195,91149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006429"},{"annotations":[101450,111756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006430"},{"annotations":[101285,91346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006431"},{"annotations":[89820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070143"},{"annotations":[103308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070144"},{"annotations":[114114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070146"},{"annotations":[93116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070150"},{"annotations":[90768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070158"},{"annotations":[93404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070183"},{"annotations":[93778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070185"},{"annotations":[93320,89726,114100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006432"},{"annotations":[102000,103204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006433"},{"annotations":[91538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006434"},{"annotations":[90577,103376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006435"},{"annotations":[92191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006418"},{"annotations":[92007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006436"},{"annotations":[111124,113471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006437"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways by which the various amino acids become bonded to their corresponding tRNAs. The most common route for synthesis of aminoacyl tRNA is by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules.","definition_xrefs":["MetaCyc:Aminoacyl-tRNAs","GOC:mah","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA metabolic process","termid":"GO:0006399"},{"relation_name":"is_a","term_name":"amino acid activation","termid":"GO:0043038"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00243":null,"SJAG_00420":null,"SJAG_00443":null,"SJAG_00488":null,"SJAG_00653":null,"SJAG_01159":null,"SJAG_01197":null,"SJAG_01235":null,"SJAG_01259":null,"SJAG_01352":null,"SJAG_01522":null,"SJAG_01577":null,"SJAG_01797":null,"SJAG_02015":null,"SJAG_02206":null,"SJAG_02236":null,"SJAG_02263":null,"SJAG_02428":null,"SJAG_02517":null,"SJAG_02615":null,"SJAG_02721":null,"SJAG_02977":null,"SJAG_03071":null,"SJAG_03277":null,"SJAG_03545":null,"SJAG_03585":null,"SJAG_03626":null,"SJAG_04094":null,"SJAG_04285":null,"SJAG_04409":null,"SJAG_04473":null,"SJAG_04482":null,"SJAG_04738":null,"SJAG_04762":null,"SJAG_04840":null,"SJAG_04856":null,"SJAG_05560":null,"SJAG_16456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aminoacyl-tRNA biosynthesis","type":"exact"},{"name":"aminoacyl-tRNA biosynthetic process","type":"exact"},{"name":"tRNA charging","type":"exact"}],"termid":"GO:0043039","terms_by_termid":{"GO:0006418":null,"GO:0006421":null,"GO:0006422":null,"GO:0006423":null,"GO:0006424":null,"GO:0006425":null,"GO:0006426":null,"GO:0006427":null,"GO:0006428":null,"GO:0006429":null,"GO:0006430":null,"GO:0006431":null,"GO:0006432":null,"GO:0006433":null,"GO:0006434":null,"GO:0006435":null,"GO:0006436":null,"GO:0006437":null,"GO:0061475":null,"GO:0070143":null,"GO:0070144":null,"GO:0070146":null,"GO:0070150":null,"GO:0070158":null,"GO:0070183":null,"GO:0070185":null,"GO:0070681":null,"GO:1990762":null}}


id: GO:0019317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fucose (6-deoxygalactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose metabolic process","termid":"GO:0006004"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"fucose catabolic process","secondary_identifiers":["MetaCyc:FUCCAT-PWY"],"synonyms":[{"name":"fucose breakdown","type":"exact"},{"name":"fucose catabolism","type":"exact"},{"name":"fucose degradation","type":"exact"}],"termid":"GO:0019317"}


id: GO:0072198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population of the ureter, that contributes to ureter development.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"part_of","term_name":"ureter development","termid":"GO:0072189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell proliferation involved in ureter development","synonyms":[{"name":"ureter mesenchymal cell proliferation","type":"related"},{"name":"ureteral mesenchymal cell proliferation","type":"related"}],"termid":"GO:0072198"}


id: GO:1900710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tensidol B biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"tensidol B biosynthetic process","termid":"GO:1900608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of tensidol B biosynthetic process","synonyms":[{"name":"regulation of tensidol B anabolism","type":"exact"},{"name":"regulation of tensidol B biosynthesis","type":"exact"},{"name":"regulation of tensidol B formation","type":"exact"},{"name":"regulation of tensidol B synthesis","type":"exact"}],"termid":"GO:1900710"}


id: GO:0009807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lignans, any member of a class of plant metabolites related to lignins. Lignans are usually found as phenylpropanoid dimers in which the phenylpropanoid units are linked tail to tail and thus having a 2,3 dibenzylbutane skeleton, but higher oligomers can also exist.","definition_xrefs":["PMID:10074466","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lignan biosynthetic process","synonyms":[{"name":"lignan anabolism","type":"exact"},{"name":"lignan biosynthesis","type":"exact"},{"name":"lignan formation","type":"exact"},{"name":"lignan synthesis","type":"exact"}],"termid":"GO:0009807"}


id: PBO:0045138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 6","termid":"PBO:0045138"}


id: PBO:0080731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWC family member 3","termid":"PBO:0080731"}


id: PBO:0034288
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_inhibits","termid":"PBO:0034288"}


id: PBO:0047993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member J, pseudogene","termid":"PBO:0047993"}


id: PBO:0078481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-1","termid":"PBO:0078481"}


id: GO:0032278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a gonadotropin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gonadotropin secretion","termid":"GO:0032276"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"gonadotropin secretion","termid":"GO:0032274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gonadotropin secretion","synonyms":[{"name":"activation of gonadotropin secretion","type":"narrow"},{"name":"positive regulation of gonadotrophin secretion","type":"exact"},{"name":"stimulation of gonadotropin secretion","type":"narrow"},{"name":"up regulation of gonadotropin secretion","type":"exact"},{"name":"up-regulation of gonadotropin secretion","type":"exact"},{"name":"upregulation of gonadotropin secretion","type":"exact"}],"termid":"GO:0032278"}


id: PBO:0057017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 105-2","termid":"PBO:0057017"}


id: GO:0097115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process involved in assembly of the presynaptic membrane in which neurexins are localized to distinct domains in the cell membrane. Neurexins are synaptic cell surface proteins which act as cell recognition molecules at nerve terminals.","definition_xrefs":["GOC:sjp","PMID:12796785","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"presynaptic membrane assembly","termid":"GO:0097105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0061024","GO:0044085"],"is_obsolete":false,"name":"neurexin clustering involved in presynaptic membrane assembly","synonyms":[{"name":"Nrxn clustering","type":"broad"},{"name":"neurexin clustering","type":"broad"},{"name":"presynaptic neurexin clustering","type":"exact"}],"termid":"GO:0097115"}


id: GO:1902182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a shoot apical meristem over time, from its formation to the mature structure.","definition_xrefs":["GOC:TermGenie","PMID:21496644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot apical meristem development","synonyms":[{"name":"SAM development","type":"exact"},{"name":"primary shoot meristem development","type":"related"},{"name":"promeristem development","type":"broad"}],"termid":"GO:1902182"}


id: PBO:0065098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type I regulatory subunit alpha pseudogene 1","termid":"PBO:0065098"}


id: PBO:0085734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in threonylcarbamoyl adenosine biosynthesis; Sua5p and Qri7p are necessary and sufficient for RNA t6A modification in vitro; highly conserved mitochondrial protein; essential for t6A modification of mitochondrial tRNAs that decode ANN codons; similar to Kae1p and E. coli YgjD, both of which are also required for tRNA t6A modification; when directed to the cytoplasm, complements the essential function of Kae1p in the KEOPS complex","termid":"PBO:0085734"}


id: GO:1901838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription of nuclear large rRNA mediated by RNA polymerase I.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase I","termid":"GO:0045943"},{"relation_name":"is_a","term_name":"regulation of transcription of nucleolar large rRNA by RNA polymerase I","termid":"GO:1901836"},{"relation_name":"positively_regulates","term_name":"nucleolar large rRNA transcription by RNA polymerase I","termid":"GO:0042790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription of nucleolar large rRNA by RNA polymerase I","synonyms":[{"name":"activation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"narrow"},{"name":"activation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"positive regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"up regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"up regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"up-regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"up-regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"upregulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"upregulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"}],"termid":"GO:1901838"}


id: PBO:0050362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 65","termid":"PBO:0050362"}


id: PBO:0040468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase mitochondrial F1 complex assembly factor 2","termid":"PBO:0040468"}


id: GO:0140214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of long-chain fatty acid import into a cell.","definition_xrefs":["PMID:28178239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-chain fatty acid import into cell","termid":"GO:0140212"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid transport","termid":"GO:2000193"},{"relation_name":"positively_regulates","term_name":"long-chain fatty acid import into cell","termid":"GO:0044539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of long-chain fatty acid import into cell","termid":"GO:0140214"}


id: PBO:0088179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-binding mitochondrial intermembrane space (IMS) protein; involved in a disulfide relay system for IMS import of cysteine-containing proteins; binds Mia40p and stimulates its Erv1p-dependent oxidation, probably by sequestering zinc","termid":"PBO:0088179"}


id: GO:0045240
data:
  {"annotated_genes":["SJAG_00866","SJAG_03290","SJAG_03163","SJAG_02464","SJAG_02158","SJAG_03064","SJAG_01402","SJAG_02006"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83560,108160,106219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045252"},{"annotations":[114521,95128,104681,110328,83561,91107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045254"}]},"cv_name":"cellular_component","definition":"A multi-enzyme complex that catalyzes the oxidative decarboxylation of an alpha-ketoacid - pyruvate, a branched-chain alpha-ketoacid or alpha-ketoglutarate (also known as 2-oxoglutarate). The complex comprises multiple copies of three enzymes referred to as E1, E2 and E3: a dihydrolipoyl transacylase (E2) forms the core of the complex, with an alpha-ketoacid dehydrogenase (E1) and a dihydrolipoamide dehydrogenase (E3) attached through non-covalent bonds. The E1 and E2 components are specific to different alpha-ketoacid dehydrogenase complexes, whereas the E3 component is the same. Additional proteins may also be present.","definition_xrefs":["GOC:mah","PMID:10745006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_01402":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02464":null,"SJAG_03064":null,"SJAG_03163":null,"SJAG_03290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha-ketoacid dehydrogenase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2-oxoacid dehydrogenase complex","type":"exact"},{"name":"dihydrolipoyl dehydrogenase complex","type":"exact"}],"termid":"GO:0045240","terms_by_termid":{"GO:0045252":null,"GO:0045254":null}}


id: PBO:0056418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myristoylated alanine rich protein kinase C substrate","termid":"PBO:0056418"}


id: PBO:0083224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with SRB8/YCR081W; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083224"}


id: GO:0060297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actomyosin structure organization","termid":"GO:0110020"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"sarcomere organization","termid":"GO:0045214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of sarcomere organization","synonyms":[{"name":"regulation of sarcomere organisation","type":"exact"}],"termid":"GO:0060297"}


id: GO:0071429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains small nuclear RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete snRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071429)","synonyms":[{"name":"snRNA-containing RNP export from nucleus","type":"exact"},{"name":"snRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"snRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"snRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071429"}


id: PBO:0045618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 29 (pseudogene)","termid":"PBO:0045618"}


id: PBO:0076147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUN domain containing ossification factor","termid":"PBO:0076147"}


id: PBO:0079933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA biogenesis phosphodiesterase 1","termid":"PBO:0079933"}


id: PBO:0000565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthase (glutamine hydrolyzing), aspartate carbamoyltransferase Ura1","termid":"PBO:0000565"}


id: PBO:0080911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta","termid":"PBO:0080911"}


id: FYECO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which AP20187 was added to the medium or assay buffer.","definition_xrefs":["CHEBI:136847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ AP20187","termid":"FYECO:0000335"}


id: FYPO:0008268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphate (Pi) measured in the cell is lower than normal.","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular phosphate (Pi) level","termid":"FYPO:0008268"}


id: PBO:0072310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 7","termid":"PBO:0072310"}


id: PBO:0085529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S28, no bacterial homolog; has an extraribosomal function in autoregulation, in which Rps28Bp binds to a decapping complex via Edc3p, which then binds to RPS28B mRNA leading to its decapping and degradation; RPS28B has a paralog, RPS28A, that arose from the whole genome duplication","termid":"PBO:0085529"}


id: PBO:0003743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human c19orf29 ortholog","termid":"PBO:0003743"}


id: PBO:0072935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 15","termid":"PBO:0072935"}


id: PBO:0003579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm10/Mdm12/Mmm1 complex subunit Mmm1 (predicted)","termid":"PBO:0003579"}


id: PBO:0072416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 21","termid":"PBO:0072416"}


id: PBO:0031458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_leptomycin_B","termid":"PBO:0031458"}


id: GO:0031071
data:
  {"annotated_genes":["SJAG_00186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102971],"is_not":false,"summary":null,"term":"GO:0031071"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + [enzyme]-cysteine = L-alanine + [enzyme]-S-sulfanylcysteine.","definition_xrefs":["EC:2.8.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cysteine desulfurase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-947514","Reactome:R-HSA-1362408","RHEA:43892"],"synonyms":[{"name":"IscS","type":"related"},{"name":"L-cysteine:enzyme cysteine sulfurtransferase activity","type":"related"},{"name":"NIFS","type":"related"},{"name":"SufS","type":"related"},{"name":"cysteine desulfurylase activity","type":"related"}],"termid":"GO:0031071","terms_by_termid":{"GO:0031071":null}}


id: GO:0010995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which free ubiquitin chains, compounds composed of a large number of ubiquitin monomers, are broken down.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"},{"relation_name":"part_of","term_name":"ubiquitin recycling","termid":"GO:0010992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"free ubiquitin chain depolymerization","termid":"GO:0010995"}


id: PBO:0048160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 5","termid":"PBO:0048160"}


id: PBO:0080688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt ligand secretion mediator","termid":"PBO:0080688"}


id: PBO:0072708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 2B","termid":"PBO:0072708"}


id: GO:0044278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of the cell wall of another organism, leading to damage or temporary subversion of the cell wall.","definition_xrefs":["PMID:36738900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of cellular anatomical structure in another organism","termid":"GO:0140975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disruption of cell wall in another organism","synonyms":[{"name":"cell wall disruption in another organism","type":"exact"},{"name":"cell wall disruption in other organism","type":"exact"}],"termid":"GO:0044278"}


id: PBO:0086307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with MTHFR activity in vitro; null mutant has no phenotype and is prototrophic for methionine; MET13 encodes major isozyme of methylenetetrahydrofolate reductase (MTHFR)","termid":"PBO:0086307"}


id: PBO:0003542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-adenosyl)-triphosphatase (predicted)","termid":"PBO:0003542"}


id: GO:0002567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the generation of sequence diversity of the FREP-based immune receptors of snails.","definition_xrefs":["PMID:16102575","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of FREP-based immune receptors","termid":"GO:0002567"}


id: PBO:0072995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCML2 pseudogene 2","termid":"PBO:0072995"}


id: PATO:0001849
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of a portion of the bearer's surface being scraped away.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abrased","termid":"PATO:0001849"}


id: PBO:0074997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-8","termid":"PBO:0074997"}


id: PBO:0058909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12127","termid":"PBO:0058909"}


id: GO:0075705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus into a host cell that begins by invagination of a specific region of the host cell plasma membrane around the bound virus to form a clathrin-coated pit, which then pinches off to form a clathrin-coated endocytic vesicles containing the virus. The vesicle then delivers its viral content to early endosomes, and the process ends when the viral nucleic acid is released into the host cytoplasm by its injection through the endosome membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via clathrin-mediated endocytosis followed by genetic injection through the endosome membrane (obsolete GO:0075705)","synonyms":[{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by genetic injection through the endosome membrane","type":"exact"},{"name":"viral penetration via endocytosis followed by genetic injection through the endosome membrane","type":"exact"}],"termid":"GO:0075705"}


id: PBO:0040115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 2","termid":"PBO:0040115"}


id: PBO:0048878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member D","termid":"PBO:0048878"}


id: GO:0046234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of fluorene, a tricyclic polycyclic aromatic hydrocarbon containing a five-membered ring. It is a major component of fossil fuels and their derivatives and is also a by-product of coal-conversion and energy-related industries. It is commonly found in vehicle exhaust emissions, crude oils, motor oils, coal and oil combustion products, waste incineration, and industrial effluents.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete fluorene biosynthetic process (obsolete GO:0046234)","synonyms":[{"name":"fluorene anabolism","type":"exact"},{"name":"fluorene biosynthesis","type":"exact"},{"name":"fluorene biosynthetic process","type":"exact"},{"name":"fluorene formation","type":"exact"},{"name":"fluorene synthesis","type":"exact"}],"termid":"GO:0046234"}


id: FYPO:0002989
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron transport messenger RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Iron transport m RNAs are transcribed from genes whose products are involved in iron transport.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased level of transmembrane transport gene mRNA during vegetative growth","synonyms":[{"name":"increased level of transmembrane transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of transmembrane transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of transmembrane transport gene transcripts during vegetative growth","type":"exact"},{"name":"increased mRNA level of genes involved in transmembrane transport during vegetative growth","type":"exact"},{"name":"increased mRNA level of transmembrane transport genes during vegetative growth","type":"exact"},{"name":"increased transmembrane transport gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002989"}


id: SO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposable element that is incorporated into a chromosome by a mechanism that requires reverse transcriptase.","direct_ancestors":[{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon","secondary_identifiers":["http://en.wikipedia.org/wiki/Retrotransposon"],"synonyms":[{"name":"class I","type":"related"},{"name":"class I transposon","type":"exact"},{"name":"retrotransposon element","type":"exact"}],"termid":"SO:0000180"}


id: PBO:0057397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-5","termid":"PBO:0057397"}


id: SO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in an insulator region of a nucleotide molecule, interacts selectively and non-covalently with polypeptide residues.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"},{"relation_name":"part_of","term_name":"insulator","termid":"SO:0000627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulator_binding_site","synonyms":[{"name":"insulator binding site","type":"related"}],"termid":"SO:0001460"}


id: PBO:0058067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4286","termid":"PBO:0058067"}


id: GO:0004447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: iodide + H2O2 = iodine + 2 H2O.","definition_xrefs":["RHEA:23336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"haloperoxidase activity","termid":"GO:0140905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"iodide peroxidase activity","secondary_identifiers":["EC:1.11.1.8","MetaCyc:IODIDE-PEROXIDASE-RXN"],"synonyms":[{"name":"TPO activity","type":"related"},{"name":"iodinase activity","type":"related"},{"name":"thyroid peroxidase activity","type":"related"},{"name":"thyroperoxidase activity","type":"related"}],"termid":"GO:0004447"}


id: PBO:0043657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q2, polyprenyltransferase","termid":"PBO:0043657"}


id: GO:0042791
data:
  {"annotated_genes":["SJAG_02815"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105225],"is_not":false,"summary":null,"term":"GO:0042791"}]},"cv_name":"biological_process","definition":"The synthesis of 5S ribosomal RNA (rRNA), or an equivalent rRNA, from a DNA template by RNA polymerase III (Pol III), originating at a type 1 RNA polymerase III promoter.","definition_xrefs":["GOC:jl","PMID:12381659","GOC:txnOH","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"},{"relation_name":"is_a","term_name":"rRNA transcription","termid":"GO:0009303"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"5S class rRNA transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5S class rRNA transcription from RNA polymerase III type 1 promoter","type":"related"},{"name":"5S rRNA transcription","type":"exact"}],"termid":"GO:0042791","terms_by_termid":{"GO:0042791":null}}


id: GO:0102146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tricetin + S-adenosyl-L-methionine = H+ + 3'-O-methyltricetin + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:27493","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"tricetin O-methytransferase activity","secondary_identifiers":["MetaCyc:RXN-11582"],"termid":"GO:0102146"}


id: GO:2000768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"},{"relation_name":"positively_regulates","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nephron tubule epithelial cell differentiation","termid":"GO:2000768"}


id: PBO:0059492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage stimulating 1 like (pseudogene)","termid":"PBO:0059492"}


id: GO:0032412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of an ion transporter.","definition_xrefs":["GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of monoatomic ion transmembrane transporter activity","synonyms":[{"name":"regulation of ion transmembrane transporter activity","type":"broad"},{"name":"regulation of ion transporter activity","type":"exact"}],"termid":"GO:0032412"}


id: GO:0045453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products.","definition_xrefs":["PMID:10968780","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"},{"relation_name":"part_of","term_name":"bone remodeling","termid":"GO:0046849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone resorption","secondary_identifiers":["Wikipedia:Bone_resorption"],"termid":"GO:0045453"}


id: PBO:0048652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GJD2 divergent transcript","termid":"PBO:0048652"}


id: PBO:0073743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 2","termid":"PBO:0073743"}


id: PBO:0004507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase (synaptojanin homolog 1)","termid":"PBO:0004507"}


id: PBO:0046649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase A4","termid":"PBO:0046649"}


id: GO:0019054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a virus effects a change in the processes and activities of its host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host process","termid":"GO:0019048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by virus of host cellular process","synonyms":[{"name":"modification by virus of host cellular process","type":"exact"},{"name":"modulation by virus of host process","type":"broad"},{"name":"modulation of cellular process in host by virus","type":"related"},{"name":"regulation by virus of host cellular process","type":"exact"},{"name":"regulation of cellular process in host by virus","type":"exact"},{"name":"regulation of host cellular process by virus","type":"exact"},{"name":"viral host cell process manipulation","type":"exact"}],"termid":"GO:0019054"}


id: PBO:0069207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 462, pseudogene","termid":"PBO:0069207"}


id: PBO:0025489
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA Like Protein","termid":"PBO:0025489"}


id: FYPO:0003502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing raffinose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth on raffinose carbon source","termid":"FYPO:0001162"},{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0001985","FYPO:0005447","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"abolished cell population growth on raffinose carbon source","synonyms":[{"name":"abolished growth on raffinose carbon source","type":"broad"},{"name":"abolished raffinose utilization","type":"related"},{"name":"abolished vegetative cell population growth on raffinose carbon source","type":"exact"},{"name":"cell population growth on raffinose carbon source abolished","type":"exact"}],"termid":"FYPO:0003502"}


id: PBO:0005459
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.1.2","termid":"PBO:0005459"}


id: GO:1902083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-cysteine S-nitrosylation.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","PMID:19198614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of peptidyl-cysteine S-nitrosylation","termid":"GO:2000169"},{"relation_name":"negatively_regulates","term_name":"peptidyl-cysteine S-nitrosylation","termid":"GO:0018119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-cysteine S-nitrosylation","synonyms":[{"name":"down regulation of S-nitrosylation","type":"exact"},{"name":"down regulation of peptidyl-cysteine S-nitrosylation","type":"exact"},{"name":"down regulation of protein S-nitrosylation","type":"exact"},{"name":"down-regulation of S-nitrosylation","type":"exact"},{"name":"down-regulation of peptidyl-cysteine S-nitrosylation","type":"exact"},{"name":"down-regulation of protein S-nitrosylation","type":"exact"},{"name":"downregulation of S-nitrosylation","type":"exact"},{"name":"downregulation of peptidyl-cysteine S-nitrosylation","type":"exact"},{"name":"downregulation of protein S-nitrosylation","type":"exact"},{"name":"inhibition of S-nitrosylation","type":"exact"},{"name":"inhibition of peptidyl-cysteine S-nitrosylation","type":"narrow"},{"name":"inhibition of protein S-nitrosylation","type":"exact"},{"name":"negative regulation of S-nitrosylation","type":"exact"},{"name":"negative regulation of protein S-nitrosylation","type":"exact"}],"termid":"GO:1902083"}


id: PBO:0088607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Der1-like (degradation in the ER) family","termid":"PBO:0088607"}


id: GO:0042120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"alginic acid metabolic process","synonyms":[{"name":"alginate metabolic process","type":"exact"},{"name":"alginate metabolism","type":"exact"},{"name":"alginic acid metabolism","type":"exact"}],"termid":"GO:0042120"}


id: GO:1903620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transdifferentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22118091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of transdifferentiation","termid":"GO:1903618"},{"relation_name":"positively_regulates","term_name":"transdifferentiation","termid":"GO:0060290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transdifferentiation","synonyms":[{"name":"activation of transdifferentiation","type":"narrow"},{"name":"up regulation of transdifferentiation","type":"exact"},{"name":"up-regulation of transdifferentiation","type":"exact"},{"name":"upregulation of transdifferentiation","type":"exact"}],"termid":"GO:1903620"}


id: GO:2000649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transport","termid":"GO:1902305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of sodium ion transmembrane transporter activity","synonyms":[{"name":"regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000649"}


id: PBO:0113221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein; interacts with the UBA domain of mRNA export factor Mex67p; participates in the export of Msn2/4 stress-dependent mRNAs; partially redundant function with paralog PES4 in the steady-state expression, translational timing and localization of a subset of Ndt80-dependent mRNAs that are protected until translated near the end of meiosis II; redundant role with PES4 in sporulation; shuttles between the nucleus and cytoplasm, localizes to stress granules and the prospore membrane","termid":"PBO:0113221"}


id: PBO:0036007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0036007"}


id: PBO:0039510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30A","termid":"PBO:0039510"}


id: PBO:0045286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 37","termid":"PBO:0045286"}


id: PBO:0054109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1474","termid":"PBO:0054109"}


id: PBO:0060796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 2","termid":"PBO:0060796"}


id: PBO:0042511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 5","termid":"PBO:0042511"}


id: FYPO:0006576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which abnormal negative regulation of the initiation of mitotic DNA replication results in one or more rounds of rereplication of the entire genome, and other features of S phase are abnormal. Rounds of replication are not correlated with G1/S phase gene expression, and origin usage is altered.","definition_xrefs":["PomBase:mah","PMID:19487461","PMID:20736315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","termid":"FYPO:0001425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication, with abnormal S phase","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with abnormal S phase, during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication, with abnormal S phase, during vegetative growth","type":"exact"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in continuous DNA synthesis","type":"related"}],"termid":"FYPO:0006576"}


id: PATO:0000527
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000527 relative drug sensitivity value (obsolete PATO:0000527)","termid":"PATO:0000527"}


id: PATO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000242 flinch reflex (obsolete PATO:0000242)","termid":"PATO:0000242"}


id: PBO:0048604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit 8 homolog","termid":"PBO:0048604"}


id: PBO:0047817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N3 pseudogene 1","termid":"PBO:0047817"}


id: PBO:0036142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_iron","termid":"PBO:0036142"}


id: MOD:01027
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-amyloxycarbonyl","synonyms":[{"name":"Aoc","type":"exact"}],"termid":"MOD:01027"}


id: PBO:0077932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 5","termid":"PBO:0077932"}


id: GO:0003305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell of the myocardium from one site to another that will contribute to heart jogging.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"heart jogging","termid":"GO:0003146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in heart jogging","termid":"GO:0003305"}


id: PBO:0111941
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-RBZ","termid":"PBO:0111941"}


id: PBO:0040547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta 3-glucosyltransferase","termid":"PBO:0040547"}


id: PBO:0005659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutS protein homolog","termid":"PBO:0005659"}


id: GO:0033436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AUG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"AUG codon-amino acid adaptor activity","synonyms":[{"name":"ATG codon-amino acid adaptor activity","type":"exact"},{"name":"initiator methionine tRNA","type":"related"},{"name":"methionine tRNA","type":"related"}],"termid":"GO:0033436"}


id: PBO:0059912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 35","termid":"PBO:0059912"}


id: FYPO:0004420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein serine phosphorylation (obsolete FYPO:0004420)","synonyms":[{"name":"increased peptidyl-serine phosphorylation","type":"exact"},{"name":"increased serine phosphorylation","type":"exact"}],"termid":"FYPO:0004420"}


id: GO:0046890
data:
  {"annotated_genes":["SJAG_03130","SJAG_04018","SJAG_02104","SJAG_02380","SJAG_01307","SJAG_03940","SJAG_02044","SJAG_01906","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[107350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[107460,111560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[105822,108838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"},{"annotations":[105942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[105943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[101919,84698,84699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"regulates","term_name":"lipid biosynthetic process","termid":"GO:0008610"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01307":null,"SJAG_01906":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02380":null,"SJAG_03130":null,"SJAG_03940":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of lipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of lipid anabolism","type":"exact"},{"name":"regulation of lipid biosynthesis","type":"exact"},{"name":"regulation of lipid formation","type":"exact"},{"name":"regulation of lipid synthesis","type":"exact"},{"name":"regulation of lipogenesis","type":"exact"}],"termid":"GO:0046890","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0045717":null,"GO:0070452":null,"GO:0071072":null,"GO:2001211":null}}


id: PBO:0045970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early growth response 3","termid":"PBO:0045970"}


id: PBO:0056314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 1","termid":"PBO:0056314"}


id: GO:0008867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactarate = 5-dehydro-4-deoxy-D-glucarate + H2O.","definition_xrefs":["RHEA:16005","EC:4.2.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"galactarate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R05608","MetaCyc:GALACTARDEHYDRA-RXN"],"synonyms":[{"name":"D-galactarate hydro-lyase (5-dehydro-4-deoxy-D-glucarate-forming)","type":"related"},{"name":"D-galactarate hydro-lyase activity","type":"related"}],"termid":"GO:0008867"}


id: PBO:0062508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily H member 3","termid":"PBO:0062508"}


id: GO:1905045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22393241","GOC:BHF_miRNA","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Schwann cell proliferation","termid":"GO:0010626"},{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"},{"relation_name":"negatively_regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell proliferation involved in axon regeneration","synonyms":[{"name":"down regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"down-regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"downregulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"inhibition of Schwann cell proliferation involved in axon regeneration","type":"narrow"}],"termid":"GO:1905045"}


id: PBO:0065093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit gamma 2","termid":"PBO:0065093"}


id: GO:0071861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a tachykinin receptor.","definition_xrefs":["GOC:kmv","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tachykinin receptor binding","termid":"GO:0071861"}


id: PBO:0002019
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.-.-","termid":"PBO:0002019"}


id: PBO:0045407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 9","termid":"PBO:0045407"}


id: FYPO:0004481
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115305,115317],"is_not":false,"summary":null,"term":"FYPO:0004481"}]},"cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow at high temperatures.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"abolished cell population growth at high temperature","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"synonyms":[{"name":"abolished cell population growth at high temperature during mitotic cell cycle","type":"related"},{"name":"abolished growth at high temperature","type":"broad"},{"name":"abolished vegetative cell population growth at high temperature","type":"exact"},{"name":"cell population growth at high temperature abolished","type":"exact"},{"name":"heat sensitive","type":"related"},{"name":"hypersensitive to high temperature","type":"related"},{"name":"sensitive to heat","type":"related"},{"name":"sensitive to high temperature","type":"related"},{"name":"sensitive to high temperature during vegetative growth","type":"related"},{"name":"temperature sensitive","type":"related"}],"termid":"FYPO:0004481","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0004481":null}}


id: GO:1903315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nitrogen cycle metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"},{"relation_name":"negatively_regulates","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"negatively_regulates","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0071941","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitrogen cycle metabolic process","synonyms":[{"name":"down regulation of nitrogen cycle metabolic process","type":"exact"},{"name":"down-regulation of nitrogen cycle metabolic process","type":"exact"},{"name":"downregulation of nitrogen cycle metabolic process","type":"exact"},{"name":"inhibition of nitrogen cycle metabolic process","type":"narrow"}],"termid":"GO:1903315"}


id: GO:0060164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process controlling the activation and/or rate at which a relatively unspecialized cell acquires features of a neuron.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"is_a","term_name":"regulation of timing of cell differentiation","termid":"GO:0048505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of neuron differentiation","termid":"GO:0060164"}


id: PBO:0017725
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Partner Of Spa2","termid":"PBO:0017725"}


id: PBO:0031586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_translation_phenotype","termid":"PBO:0031586"}


id: PBO:0050976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon related developmental regulator 2","termid":"PBO:0050976"}


id: PBO:0068133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 440","termid":"PBO:0068133"}


id: GO:1901820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alpha-zeacarotene.","definition_xrefs":["PMID:6060456","UniPathway:UPA00804","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"alpha-zeacarotene metabolic process","termid":"GO:1901819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"alpha-zeacarotene catabolic process","synonyms":[{"name":"alpha-zeacarotene breakdown","type":"exact"},{"name":"alpha-zeacarotene catabolism","type":"exact"},{"name":"alpha-zeacarotene degradation","type":"exact"}],"termid":"GO:1901820"}


id: GO:0042683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into a compound eye cone cell.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of compound eye cone cell fate specification","termid":"GO:0042682"},{"relation_name":"negatively_regulates","term_name":"compound eye cone cell fate specification","termid":"GO:0042679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye cone cell fate specification","secondary_identifiers":["GO:0010000"],"synonyms":[{"name":"down regulation of cone cell fate specification","type":"broad"},{"name":"down-regulation of cone cell fate specification","type":"broad"},{"name":"downregulation of cone cell fate specification","type":"broad"},{"name":"inhibition of cone cell fate specification","type":"broad"},{"name":"suppression of cone cell fate","type":"broad"}],"termid":"GO:0042683"}


id: PBO:0071988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 17","termid":"PBO:0071988"}


id: GO:0045124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bone tissue loss (resorption).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone remodeling","termid":"GO:0046850"},{"relation_name":"regulates","term_name":"bone resorption","termid":"GO:0045453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bone resorption","termid":"GO:0045124"}


id: PBO:0047514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetuin B","termid":"PBO:0047514"}


id: PBO:0034061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immediate_transformation_of","termid":"PBO:0034061"}


id: PBO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic aminotransferase (predicted)","termid":"PBO:0000864"}


id: PBO:0001934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Thi1","termid":"PBO:0001934"}


id: GO:0090308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of DNA methylation-dependent heterochromatin formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"regulates","term_name":"DNA methylation-dependent heterochromatin formation","termid":"GO:0006346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"regulation of DNA methylation-dependent heterochromatin formation","synonyms":[{"name":"regulation of DNA methylation-dependent heterochromatin assembly","type":"exact"},{"name":"regulation of methylation-dependent chromatin silencing","type":"broad"}],"termid":"GO:0090308"}


id: PBO:0051804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif and Sec7 domain ArfGEF 3","termid":"PBO:0051804"}


id: PBO:0003049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrous iron transporter Pcl1","termid":"PBO:0003049"}


id: PBO:0070248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 190 pseudogene","termid":"PBO:0070248"}


id: GO:2001309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the epipolythiodioxopiperazine gliotoxin, a poisonous substance produced by some species of fungi.","definition_xrefs":["PMID:16333108","GOC:di","PMID:17574915","PMID:18272357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin catabolic process","termid":"GO:0043387"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"detoxification of nitrogen compound","termid":"GO:0051410"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"},{"relation_name":"is_a","term_name":"gliotoxin metabolic process","termid":"GO:2001308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0006790","GO:0008150","GO:0044248","GO:0019748"],"is_obsolete":false,"name":"gliotoxin catabolic process","synonyms":[{"name":"gliotoxin breakdown","type":"exact"},{"name":"gliotoxin catabolism","type":"exact"},{"name":"gliotoxin degradation","type":"exact"}],"termid":"GO:2001309"}


id: PBO:0068827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 65, pseudogene","termid":"PBO:0068827"}


id: PATO:0001023
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's velocity multiplied by its mass.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"momentum","termid":"PATO:0001023"}


id: FYPO:0006704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sedoheptulose-7-phosphate measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular sedoheptulose-7-phosphate level","synonyms":[{"name":"decreased cellular sedoheptulose-7-phosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular sedoheptulose-7-phosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular sedoheptulose-7-phosphate level","type":"exact"}],"termid":"FYPO:0006704"}


id: GO:0033286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + ectoine(out/in) = ADP + phosphate + ectoine(in/out).","definition_xrefs":["GOC:mlg","RHEA:32787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled monocarboxylic acid transmembrane transporter activity","termid":"GO:0033285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled ectoine transmembrane transporter activity","secondary_identifiers":["GO:0051471"],"synonyms":[{"name":"ATP-dependent ectoine transmembrane transporter activity","type":"exact"},{"name":"ectoine transmembrane transporter activity","type":"broad"},{"name":"ectoine-transporting ATPase activity","type":"exact"}],"termid":"GO:0033286"}


id: PBO:0027084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_midzone_during_anaphase_B","termid":"PBO:0027084"}


id: PBO:0068193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 500","termid":"PBO:0068193"}


id: GO:0098536
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spherical, electron dense, cytoplasmic structure that is involved in de novo assembly of centrioles.","definition_xrefs":["PMID:24075808","PMID:5661997","PMID:25047614","GOC:dos","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"deuterosome","termid":"GO:0098536"}


id: GO:0036365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The release of transforming growth factor beta 2 (TGF-beta2) from its latent state.","definition_xrefs":["PMID:12482908","PMID:9170210","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta2 activation (obsolete GO:0036365)","synonyms":[{"name":"TGF-beta 2 activation","type":"exact"},{"name":"TGFB2 activation","type":"exact"},{"name":"TGFbeta 2 activation","type":"exact"}],"termid":"GO:0036365"}


id: MOD:01850
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links either two L-cysteine residues, or an L-cysteine residue and an L-serine residue by a thioether bond to form S-(2-aminovinyl)-D-cysteine.","definition_xrefs":["RESID:AA0204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-cysteine","termid":"MOD:01851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminovinyl)-D-cysteine","synonyms":[{"name":"(2S)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(S,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"S-(2-aminovinyl)-D-cysteine","type":"exact"}],"termid":"MOD:01850"}


id: PBO:0050798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 6","termid":"PBO:0050798"}


id: PBO:0030004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_with_more_or_fewer_than_four_spores","termid":"PBO:0030004"}


id: PBO:0013798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, nucleoporin Nup37","termid":"PBO:0013798"}


id: PBO:0056879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 divergent transcript","termid":"PBO:0056879"}


id: GO:0051515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monopolar cell growth, polarized growth from one end of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of unidimensional cell growth","termid":"GO:0051512"},{"relation_name":"is_a","term_name":"regulation of monopolar cell growth","termid":"GO:0051513"},{"relation_name":"positively_regulates","term_name":"monopolar cell growth","termid":"GO:0042814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monopolar cell growth","synonyms":[{"name":"stimulation of monopolar cell growth","type":"narrow"},{"name":"up regulation of monopolar cell growth","type":"exact"},{"name":"up-regulation of monopolar cell growth","type":"exact"},{"name":"upregulation of monopolar cell growth","type":"exact"}],"termid":"GO:0051515"}


id: MOD:01351
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a nitrated L-tryptophan.","definition_xrefs":["PubMed:9252331","Unimod:354#W","OMSSA:85","PubMed:8839040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrosylation","termid":"MOD:00461"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrated L-tryptophan","synonyms":[{"name":"Nitro","type":"related"},{"name":"Oxidation to nitro","type":"related"},{"name":"nitrow","type":"exact"}],"termid":"MOD:01351"}


id: GO:0032215
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93301],"is_not":false,"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the semi-conservative replication of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance via semi-conservative replication","termid":"GO:0032213"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200","GO:0007049"],"is_obsolete":false,"name":"positive regulation of telomere maintenance via semi-conservative replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of telomere maintenance via semi-conservative replication","type":"narrow"},{"name":"stimulation of telomere maintenance via semi-conservative replication","type":"narrow"},{"name":"up regulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"up-regulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"upregulation of telomere maintenance via semi-conservative replication","type":"exact"}],"termid":"GO:0032215","terms_by_termid":{"GO:0032215":null}}


