# terms

id: SO:0002042
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a Y-RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_RNA_primary_transcript","synonyms":[{"name":"Y-RNA primary transcript","type":"exact"}],"termid":"SO:0002042"}


id: GO:0043411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to myopalladin, a myofibrillar protein with titin-like Ig domains.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete myopalladin binding (obsolete GO:0043411)","synonyms":[{"name":"myopalladin binding","type":"exact"}],"termid":"GO:0043411"}


id: PBO:0003736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smd3","termid":"PBO:0003736"}


id: GO:0072494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A late endosome in which regions of the limiting host cell endosomal membrane invaginate to form internal vesicles; host membrane proteins that enter the internal vesicles are sequestered from the host cytoplasm.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell late endosome","termid":"GO:0044184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host multivesicular body","synonyms":[{"name":"host cell multivesicular body","type":"exact"}],"termid":"GO:0072494"}


id: SO:0000402
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000402 enhancer_attribute (obsolete SO:0000402)","termid":"SO:0000402"}


id: GO:0070950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a bacterium, the directed killing of a bacterium by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070949"},{"relation_name":"regulates","term_name":"neutrophil-mediated killing of bacterium","termid":"GO:0070944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"}


id: PBO:0063589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 5","termid":"PBO:0063589"}


id: GO:0052173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the defenses of another organism.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to defenses of other organism","synonyms":[{"name":"response to defenses of other organism during symbiotic interaction","type":"related"},{"name":"response to defenses of other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0052173"}


id: SO:0002254
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The loop portion of a stem loop, which is not folded back upon itself. ","direct_ancestors":[{"relation_name":"is_a","term_name":"stem_loop_region","termid":"SO:0002253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loop","synonyms":[{"name":"loop portion of stem loop","type":"exact"}],"termid":"SO:0002254"}


id: GO:0097351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a toxin to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:19325885","PMID:21819231","PMID:22545240","GOC:rs","PMID:19143615","PMID:24806488","Wikipedia:Toxin-antitoxin_system#Type_II"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sequestering activity","termid":"GO:0140313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140313","GO:0003674"],"is_obsolete":false,"name":"toxin sequestering activity","synonyms":[{"name":"toxin-antitoxin pair type I binding","type":"narrow"},{"name":"toxin-antitoxin pair type II binding","type":"narrow"}],"termid":"GO:0097351"}


id: PBO:0005652
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.17","termid":"PBO:0005652"}


id: PBO:0067675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 860, pseudogene","termid":"PBO:0067675"}


id: PBO:0071603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 20","termid":"PBO:0071603"}


id: PBO:0111880
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein WIPI family","termid":"PBO:0111880"}


id: PBO:0083757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential evolutionarily-conserved nucleolar protein; component of the box C/D snoRNP complexes that direct 2'-O-methylation of pre-rRNA during its maturation; overexpression causes spindle orientation defects","termid":"PBO:0083757"}


id: PBO:0027629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_histone_H3_in_cell","termid":"PBO:0027629"}


id: SO:00000020002382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant which disrupts the translation of an upstream open reading frame because the number of nucleotides inserted or deleted is not a multiple of three.","definition_xrefs":["PMID:32926138","PMID:32461616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_uORF_variant","termid":"SO:00000000002382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_frameshift_variant","synonyms":[{"name":"uFrameshift (UTRannotator)","type":"exact"}],"termid":"SO:00000020002382"}


id: GO:0140836
data:
  {"annotated_genes":["SJAG_00150","SJAG_03061","SJAG_00342"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90447,102132,105135],"is_not":false,"summary":null,"term":"GO:0140836"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) = ADP + H+ + RNA polymerase II large subunit phosphoserine (position 5).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat kinase activity","termid":"GO:0008353"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_03061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740","GO:0140096","GO:0004672"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat S5 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II C-terminal domain S5 kinase activity","type":"exact"}],"termid":"GO:0140836","terms_by_termid":{"GO:0140836":null}}


id: PBO:0054918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2332","termid":"PBO:0054918"}


id: GO:0102086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: vanillate + L-glutamate(1-) + ATP = H+ + N-vanillate-L-glutamate + AMP + diphosphoric acid.","definition_xrefs":["EC:6.3.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"N-vanillate-L-glutamate synthetase activity","secondary_identifiers":["MetaCyc:RXN-10885"],"termid":"GO:0102086"}


id: PBO:0060220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX dimerization protein 3","termid":"PBO:0060220"}


id: PBO:0059670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 36","termid":"PBO:0059670"}


id: PR:Q09716
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.11 gene.","definition_xrefs":["UniProtKB:Q09716","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B11.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.11","synonyms":[{"name":"Spom972h-SPAC18B11.11","type":"exact"}],"termid":"PR:Q09716"}


id: GO:0005182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete lipopeptide hormone (obsolete GO:0005182)","synonyms":[{"name":"lipopeptide hormone","type":"exact"}],"termid":"GO:0005182"}


id: GO:0034064
data:
  {"annotated_genes":["SJAG_02723","SJAG_00145","SJAG_04009"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91258,102733,104893],"is_not":false,"summary":null,"term":"GO:0034064"}]},"cv_name":"cellular_component","definition":"A protein complex that contains the transcription factor Ste11 and the RNA binding protein Mei2; involved in regulation of conjugation in fission yeast.","definition_xrefs":["GOC:vw","PMID:17046992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_02723":null,"SJAG_04009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Tor2-Mei2-Ste11 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034064","terms_by_termid":{"GO:0034064":null}}


id: PBO:0005247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4-like TAF Taf6, SAGA complex subunit","termid":"PBO:0005247"}


id: GO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the uptake of a G protein-coupled receptor into an endocytic vesicle.","definition_xrefs":["PMID:8396717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"},{"relation_name":"part_of","term_name":"desensitization of G protein-coupled receptor signaling pathway","termid":"GO:0002029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"G protein-coupled receptor internalization","synonyms":[{"name":"G-protein coupled receptor internalization","type":"exact"}],"termid":"GO:0002031"}


id: GO:0072294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the connecting tubule of the metanephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of connecting tubule identity","termid":"GO:0072085"},{"relation_name":"is_a","term_name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"},{"relation_name":"part_of","term_name":"metanephric connecting tubule development","termid":"GO:0072286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric connecting tubule identity","termid":"GO:0072294"}


id: PR:Q1K9C2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sir1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1K9C2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase [NADPH] subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.01c","synonyms":[{"name":"Spom972h-sir1","type":"exact"}],"termid":"PR:Q1K9C2"}


id: PBO:0072053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 23","termid":"PBO:0072053"}


id: PBO:0073389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SETD4 antisense RNA 1","termid":"PBO:0073389"}


id: FYPO:0006236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain a normal (i.e. indistinguishable from wild type) number of monomeric ribosomes (80S monosomes) in the cytosol.","definition_xrefs":["PMID:18065650","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of macromolecular complex","termid":"FYPO:0006235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cytosolic monomeric ribosome level","synonyms":[{"name":"cytosolic monomeric ribosomes present at normal level","type":"exact"},{"name":"normal cytosolic 80S monosome level","type":"exact"},{"name":"normal cytosolic monomeric 80S ribosome level","type":"exact"},{"name":"normal cytosolic monomeric ribosome level during mitotic cell cycle","type":"related"},{"name":"normal cytosolic monomeric ribosome level during vegetative growth","type":"exact"},{"name":"normal cytosolic ribosome level","type":"broad"},{"name":"normal level of cytosolic monomeric ribosomes","type":"exact"}],"termid":"FYPO:0006236"}


id: PR:Q9UTM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fap2 gene.","definition_xrefs":["UniProtKB:Q9UTM9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-saccharopine oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.04c","synonyms":[{"name":"Spom972h-fap2","type":"exact"}],"termid":"PR:Q9UTM9"}


id: PBO:0005109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug174","termid":"PBO:0005109"}


id: PBO:0011466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inheritance GTPase, tubulin-like (predicted)","termid":"PBO:0011466"}


id: SO:0002077
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the 5' UTR of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_5UTR_variant","secondary_identifiers":["http://annovar.openbioinformatics.org/en/latest/user-guide/gene/"],"synonyms":[{"name":"ANNOVAR:ncRNA_UTR5","type":"exact"},{"name":"incomplete transcript 5UTR variant","type":"exact"}],"termid":"SO:0002077"}


id: PATO:0001806
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity quality inhering in a bearer by virtue of the bearer's exposure to radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitivity to irradiation","termid":"PATO:0001806"}


id: GO:0006772
data:
  {"annotated_genes":["SJAG_00827","SJAG_04067","SJAG_02047","SJAG_03362","SJAG_02406","SJAG_02421","SJAG_03538","SJAG_01742","SJAG_04866","SJAG_02420","SJAG_04282","SJAG_00381","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58762,65402,95622],"is_not":false,"summary":null,"term":"GO:0006772"},{"annotations":[85162,109779],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[110103,103470,95620,109685,109691,112109,90395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[95623,106540,106539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"thiamine-containing compound metabolic process","termid":"GO:0042723"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01742":null,"SJAG_01970":null,"SJAG_02047":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"thiamine metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Thiamine"],"synonyms":[{"name":"thiamin metabolic process","type":"exact"},{"name":"thiamin metabolism","type":"exact"},{"name":"thiamine metabolism","type":"exact"},{"name":"vitamin B1 metabolic process","type":"exact"},{"name":"vitamin B1 metabolism","type":"exact"}],"termid":"GO:0006772","terms_by_termid":{"GO:0006772":null,"GO:0009228":null,"GO:0036172":null,"GO:0090180":null}}


id: GO:2000934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellotriose metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of cellotriose metabolic process","termid":"GO:2000933"},{"relation_name":"negatively_regulates","term_name":"cellotriose metabolic process","termid":"GO:2000893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellotriose metabolic process","synonyms":[{"name":"negative regulation of cellotriose metabolism","type":"exact"}],"termid":"GO:2000934"}


id: GO:0097360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of chorionic trophoblast cells, resulting in the expansion of their population.","definition_xrefs":["PMID:15150278","CL:0011101","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorionic trophoblast cell proliferation","termid":"GO:0097360"}


id: PBO:0068122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 429","termid":"PBO:0068122"}


id: GO:0050452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + glutathione + NADP+ = CoA-glutathione + NADPH + H+.","definition_xrefs":["RHEA:14617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"CoA-glutathione reductase (NADPH) activity","secondary_identifiers":["EC:1.8.1.10","MetaCyc:COA-GLUTATHIONE-REDUCTASE-NADPH-RXN"],"synonyms":[{"name":"CoA-glutathione reductase (NADP) activity","type":"exact"},{"name":"CoA-glutathione reductase activity","type":"broad"},{"name":"NADPH-dependent coenzyme A-SS-glutathione reductase activity","type":"exact"},{"name":"NADPH:CoA-glutathione oxidoreductase activity","type":"exact"},{"name":"coenzyme A disulfide-glutathione reductase activity","type":"broad"},{"name":"coenzyme A glutathione disulfide reductase activity","type":"broad"},{"name":"glutathione:NADP+ oxidoreductase (CoA-acylating)","type":"exact"}],"termid":"GO:0050452"}


id: FYPO:0005418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a gene product (usually a protein) that normally has ATPase activator activity has no activity in a mutant. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished ATPase activator activity","synonyms":[{"name":"ATPase activator activity abolished","type":"exact"}],"termid":"FYPO:0005418"}


id: GO:0098650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a peptidyl-proline 4-dioxygenase.","definition_xrefs":["GOC:kvm","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"peptidyl-proline 4-dioxygenase binding","termid":"GO:0098650"}


id: PBO:0050181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA synthase 1","termid":"PBO:0050181"}


id: GO:1990468
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A NuA3 complex that catalyzes the acetylation of Histone H3. In S. cerevisiae, this complex consists of Eaf6p, Nto1p, Sas3p, Taf14p, Pdp3 and associates with H3K4me3 via Pdp3p.","definition_xrefs":["GOC:rb","PMID:25104842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NuA3 histone acetyltransferase complex","termid":"GO:0033100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NuA3b histone acetyltransferase complex","termid":"GO:1990468"}


id: GO:0046478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactosylceramides, Gal-beta-(1->4)-Glc-beta-(1->1') ceramides, any compound formed by the replacement of the glycosidic C1 hydroxyl group of lactose by a ceramide group. They are the precursors of both gangliosides and globosides.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide metabolic process","termid":"GO:0006672"},{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lactosylceramide metabolic process","synonyms":[{"name":"lactosylceramide metabolism","type":"exact"}],"termid":"GO:0046478"}


id: PBO:0045856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 46","termid":"PBO:0045856"}


id: PBO:0066239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 46","termid":"PBO:0066239"}


id: GO:1901322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chloramphenicol stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chloramphenicol","termid":"GO:1901322"}


id: PBO:0038805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 9","termid":"PBO:0038805"}


id: PBO:0042503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related 23","termid":"PBO:0042503"}


id: PBO:0062932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 3-hydroxylase family member 4 (inactive)","termid":"PBO:0062932"}


id: PBO:0110328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD36 pseudogene 2","termid":"PBO:0110328"}


id: PBO:0054684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2092","termid":"PBO:0054684"}


id: PR:O94486
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cfh2 gene.","definition_xrefs":["UniProtKB:O94486","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.05c","synonyms":[{"name":"Chs four homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cfh2","type":"exact"}],"termid":"PR:O94486"}


id: FYPO:0000964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing thiabendazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on thiabendazole","synonyms":[{"name":"normal cell population growth in presence of thiabendazole","type":"exact"},{"name":"normal cell population growth on TBZ","type":"exact"},{"name":"normal cell population growth on thiabendazole","type":"exact"},{"name":"normal cellular response to thiabendazole","type":"related"},{"name":"normal vegetative cell population growth on thiabendazole","type":"exact"}],"termid":"FYPO:0000964"}


id: MOD:00248
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-phenylalanine residue to form L-phenylalanine thiazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0243","PubMed:1880060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-phenylalanine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-phenylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-phenylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Phe-Cys)","type":"exact"},{"name":"L-phenylalanine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00248"}


id: PBO:0060043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 31","termid":"PBO:0060043"}


id: SO:0001483
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"SNVs are single nucleotide positions in genomic DNA at which different sequence alternatives exist.","definition_xrefs":["SO:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substitution","termid":"SO:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNV","synonyms":[{"name":"single nucleotide variant","type":"exact"}],"termid":"SO:0001483"}


id: PR:Q09170
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase Chk2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","termid":"PR:000030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.11c","secondary_identifiers":["UniProtKB:Q09170"],"synonyms":[{"name":"Spom972h-CHEK2","type":"exact"}],"termid":"PR:Q09170"}


id: PBO:0044663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 5","termid":"PBO:0044663"}


id: PBO:0004069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin Dnm1","termid":"PBO:0004069"}


id: PBO:0027237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytosolic_large_ribosomal_subunit_level","termid":"PBO:0027237"}


id: GO:0070259
data:
  {"annotated_genes":["SJAG_04418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017005"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of phosphotyrosyl groups formed as covalent intermediates (in DNA backbone breakage) between a DNA topoisomerase and DNA.","definition_xrefs":["PMID:16751265","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070259","terms_by_termid":{"GO:0017005":null}}


id: FYPO:0005096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle pole body for a longer time than normal during anaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein localization to mitotic spindle pole body","termid":"FYPO:0001837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of protein localization to mitotic spindle pole body during anaphase","synonyms":[{"name":"increased duration of protein localisation to mitotic spindle pole body during anaphase","type":"exact"},{"name":"increased duration of protein localization to mitotic SPB during anaphase","type":"exact"},{"name":"increased duration of protein localization to spindle pole body during anaphase during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to spindle pole body during mitotic anaphase","type":"exact"},{"name":"prolonged protein localization to mitotic spindle pole body during anaphase","type":"exact"}],"termid":"FYPO:0005096"}


id: PBO:0005385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 5","termid":"PBO:0005385"}


id: GO:0043133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the hindgut. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The hindgut is the posterior part of the alimentary canal, including the rectum, and the large intestine.","definition_xrefs":["GOC:mtg_muscle","GOC:jl","UBERON:0001046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"},{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindgut contraction","termid":"GO:0043133"}


id: GO:0023028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex class I molecules via the lateral surface.","definition_xrefs":["GOC:mtg_signal","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class I protein binding","termid":"GO:0042288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"MHC class I protein binding, via lateral surface","termid":"GO:0023028"}


id: PBO:0032724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_centromere_central_core","termid":"PBO:0032724"}


id: GO:0005678
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any protein complex that acts in the formation of nucleosomes or higher order chromatin structure.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin assembly complex (obsolete GO:0005678)","synonyms":[{"name":"chromatin assembly complex","type":"exact"},{"name":"nucleosome assembly complex","type":"narrow"}],"termid":"GO:0005678"}


id: PBO:0002698
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.11","termid":"PBO:0002698"}


id: PBO:0041139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3","termid":"PBO:0041139"}


id: GO:0048624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a new plantlet develops from a meristem on the plant body. As part of this process, when the plantlet is large enough to live independently, the physical connection between the new plantlet and the main plant is severed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"asexual reproduction","termid":"GO:0019954"},{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"},{"relation_name":"is_a","term_name":"meristem development","termid":"GO:0048507"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plantlet formation on parent plant","synonyms":[{"name":"vegetative vivipary","type":"broad"},{"name":"vivipary","type":"broad"}],"termid":"GO:0048624"}


id: GO:0071628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a fungal-type vacuole membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of fungal-type vacuolar membrane (obsolete GO:0071628)","termid":"GO:0071628"}


id: PR:O59680
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c1, heme protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03118","PANTHER:PTHR10266:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1, heme protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.18","secondary_identifiers":["UniProtKB:O59680"],"synonyms":[{"name":"Spom972h-CYC1","type":"exact"},{"name":"complex III subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"complex III subunit IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytochrome b-c1 complex subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytochrome c-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59680"}


id: PBO:0030384
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_subcellular_component","termid":"PBO:0030384"}


id: PR:P0CT74
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1102 gene.","definition_xrefs":["UniProtKB:P0CT74","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S11-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.11","synonyms":[{"name":"Spom972h-rps1102","type":"exact"}],"termid":"PR:P0CT74"}


id: PBO:0000232
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longest ORF in feature","termid":"PBO:0000232"}


id: PBO:0005255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomethylpyrimidine kinase (predicted)","termid":"PBO:0005255"}


id: GO:0042884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of microcin, a class of glycine-rich, bactericidal peptides (antibiotics) produced by some enteric bacteria, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","PMID:11292337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"microcin transport","termid":"GO:0042884"}


id: GO:0030875
data:
  {"annotated_genes":["SJAG_05180","SJAG_05237","SJAG_04210","SJAG_03603"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95378,97266,111361,115281],"is_not":false,"summary":null,"term":"GO:0030875"}]},"cv_name":"cellular_component","definition":"Any of the tandem arrays of rDNA localized at the periphery of the nucleus and protruding into the nucleolus, and associated proteins. May be visible as a single or double spot by DAPI staining.","definition_xrefs":["PMID:1629244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolar chromatin","termid":"GO:0030874"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03603":null,"SJAG_04210":null,"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005694","GO:0005730","GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"rDNA protrusion","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"synonyms":[{"name":"ribosomal DNA protrusion","type":"exact"}],"termid":"GO:0030875","terms_by_termid":{"GO:0030875":null}}


id: GO:0046191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring, in the presence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic phenol-containing compound metabolic process","termid":"GO:0018959"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerobic phenol-containing compound catabolic process","synonyms":[{"name":"aerobic phenol-containing compound breakdown","type":"exact"},{"name":"aerobic phenol-containing compound catabolism","type":"exact"},{"name":"aerobic phenol-containing compound degradation","type":"exact"}],"termid":"GO:0046191"}


id: PBO:0076102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 7","termid":"PBO:0076102"}


id: PBO:0065814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3A interacting protein","termid":"PBO:0065814"}


id: FYPO:0001581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which vacuoles are more visible (usually by microscopy) than normal. A vacuolated phenotype may be due to the presence of more vacuoles in a cell than normal, or to vacuoles located nearer the cell surface (and hence more visible) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"vacuolated","synonyms":[{"name":"vacuolated during mitotic cell cycle","type":"related"},{"name":"vacuolated during vegetative growth","type":"exact"}],"termid":"FYPO:0001581"}


id: GO:0061909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which autophagosomes, double-membraned vesicles containing cytoplasmic material, fuse with a vacuole (yeast) or lysosome (e.g. mammals and insects). In the case of yeast, inner membrane-bounded structures (autophagic bodies) appear in the vacuole. Fusion provides an acidic environment and digestive function to the interior of the autophagosome.","definition_xrefs":["PMID:28077293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006914","GO:0006810","GO:0008150","GO:0016192","GO:0061024","GO:0044248"],"is_obsolete":false,"name":"autophagosome-lysosome fusion","synonyms":[{"name":"autophagosome fusion","type":"broad"},{"name":"autophagosome-vacuole fusion","type":"exact"}],"termid":"GO:0061909"}


id: PBO:0017953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase Pus7 (predicted)","termid":"PBO:0017953"}


id: CHEBI:18385
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine(1+)","termid":"CHEBI:18385"}


id: PBO:0031258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_DNA_replication_checkpoint","termid":"PBO:0031258"}


id: PBO:0083617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex; catalyzes the direct oxidative decarboxylation of pyruvate to acetyl-CoA; phosphorylated; regulated by glucose; PDH complex is concentrated in spots within the mitochondrial matrix, often near the ERMES complex and near peroxisomes","termid":"PBO:0083617"}


id: GO:0014748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of tonic skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tonic skeletal muscle contraction","termid":"GO:0014746"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"},{"relation_name":"negatively_regulates","term_name":"tonic skeletal muscle contraction","termid":"GO:0014720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tonic skeletal muscle contraction","termid":"GO:0014748"}


id: FYPO:0006632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more free fatty acids measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:30003614","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular free fatty acid level","synonyms":[{"name":"normal cellular fatty acid level","type":"exact"},{"name":"normal cellular free fatty acid level during mitotic cell cycle","type":"related"},{"name":"normal cellular free fatty acid level during vegetative growth","type":"exact"},{"name":"normal level of free fatty acids in cell","type":"exact"}],"termid":"FYPO:0006632"}


id: PBO:0004077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GDP/GTP exchange factor","termid":"PBO:0004077"}


id: GO:0045479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recruitment of vesicles to the fusome. The vesicles become the fusome tubule network and are necessary for the assembly of the fusome.","definition_xrefs":["PMID:9046244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting","termid":"GO:0006903"},{"relation_name":"part_of","term_name":"fusome organization","termid":"GO:0045478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"vesicle targeting to fusome","synonyms":[{"name":"vesicle-fusome targeting","type":"exact"}],"termid":"GO:0045479"}


id: GO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a myeloid dendritic cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell cytokine production","termid":"GO:0002371"},{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"},{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell cytokine production","termid":"GO:0002372"}


id: GO:0090248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that contributes to somitogenic axis elongation.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"axis elongation involved in somitogenesis","termid":"GO:0090245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in somitogenic axis elongation","secondary_identifiers":["GO:0090247"],"synonyms":[{"name":"cell motility involved in somitogenic axis elongation","type":"broad"}],"termid":"GO:0090248"}


id: GO:0042184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"xylene catabolic process","synonyms":[{"name":"xylene breakdown","type":"exact"},{"name":"xylene catabolism","type":"exact"},{"name":"xylene degradation","type":"exact"}],"termid":"GO:0042184"}


id: GO:0075068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont, or the progression of the symbiont from an initial condition to a later condition, occurring in its host's vascular tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont in host vascular tissue (obsolete GO:0075068)","synonyms":[{"name":"growth or development of symbiont in host vascular tissue","type":"exact"}],"termid":"GO:0075068"}


id: PBO:0049801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocretin neuropeptide precursor","termid":"PBO:0049801"}


id: SO:0000280
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_gene","synonyms":[{"name":"engineered gene","type":"exact"}],"termid":"SO:0000280"}


id: GO:0009341
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses beta-galactosidase activity, i.e. catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. In E. coli, the complex is a homotetramer; dimeric and hexameric beta-galactosidase complexes have been observed in other species.","definition_xrefs":["PMID:15950161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"beta-galactosidase complex","termid":"GO:0009341"}


id: FYPO:0004718
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}],"single_locus_phenotype":[{"annotations":[115650],"is_not":false,"summary":null,"term":"FYPO:0004718"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to heterochromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":2,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892"],"name":"abnormal protein localization to heterochromatin","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892"],"single_locus_genotype_uniquenames":["vps4delta"],"synonyms":[{"name":"abnormal protein localisation to heterochromatin","type":"exact"}],"termid":"FYPO:0004718","terms_by_termid":{"FYPO:0001132":null,"FYPO:0004718":null,"FYPO_EXT:0000001":null}}


id: PBO:0063327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 3","termid":"PBO:0063327"}


id: PBO:0035793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_export_from_nucleus_during_glucose_starvation","termid":"PBO:0035793"}


id: GO:0071773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bone morphogenetic protein (BMP) stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to BMP","termid":"GO:0071772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to BMP stimulus","synonyms":[{"name":"cellular response to bone morphogenetic protein stimulus","type":"exact"}],"termid":"GO:0071773"}


id: PBO:0039114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha 2-HS glycoprotein","termid":"PBO:0039114"}


id: PBO:0004324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3HC4 type (RING finger)/GCN5-related N acetyltransferase fusion protein","termid":"PBO:0004324"}


id: GO:0080005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Adjustment of Photosystem I/Photosystem II ratio in response to light conditions. The function of photosystem stoichiometry adjustment is to compensate for any deficiency in energy conversion at either photosystem I or photosystem II by increasing the quantity the photosystem that will otherwise become the rate-limiting to overall photosynthesis.","definition_xrefs":["PMID:11607105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis","termid":"GO:0010109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photosystem stoichiometry adjustment","termid":"GO:0080005"}


id: PBO:0083852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain an S1 RNA binding domain; human homolog EXOSC1 partially complements yeast csl4 null mutant, and can complement inviability of strain in which expression of CSL4 is repressed","termid":"PBO:0083852"}


id: GO:1900129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G-protein activated inward rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G-protein activated inward rectifier potassium channel activity","termid":"GO:1900128"},{"relation_name":"is_a","term_name":"positive regulation of inward rectifier potassium channel activity","termid":"GO:1901980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of G-protein activated inward rectifier potassium channel activity","synonyms":[{"name":"activation of G protein activated inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G protein enhanced inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein activated inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein enhanced inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein-activated inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein-enhanced inward rectifier potassium channel activity","type":"narrow"},{"name":"positive regulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"}],"termid":"GO:1900129"}


id: SO:0000090
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from plastid sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"plastid_sequence","termid":"SO:0000740"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_gene","synonyms":[{"name":"plastid gene","type":"exact"}],"termid":"SO:0000090"}


id: PBO:0046147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIPR1 intronic transcript 1","termid":"PBO:0046147"}


id: PBO:0000179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI anchor biosynthesis protein Gpi7 (predicted)","termid":"PBO:0000179"}


id: GO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Proteins that associate with the ends of intermediate filaments and couple the intermediate filaments to the plasma membrane.","definition_xrefs":["PMID:9484600","GOC:ajp"],"gene_count":0,"genotype_count":0,"name":"obsolete type III intermediate filament associated protein (obsolete GO:0001724)","synonyms":[{"name":"type III intermediate filament associated protein","type":"exact"}],"termid":"GO:0001724"}


id: SO:0001103
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with zinc ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_zinc_ion_contact_site","secondary_identifiers":["BS:00185"],"synonyms":[{"name":"Zn_contact_site","type":"exact"},{"name":"polypeptide zinc ion contact site","type":"exact"}],"termid":"SO:0001103"}


id: GO:1900762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of averantin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"averantin metabolic process","termid":"GO:1900761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"averantin catabolic process","synonyms":[{"name":"averantin breakdown","type":"exact"},{"name":"averantin catabolism","type":"exact"},{"name":"averantin degradation","type":"exact"}],"termid":"GO:1900762"}


id: GO:0005045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A receptor in the endoplasmic reticulum.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete endoplasmic reticulum receptor activity (obsolete GO:0005045)","synonyms":[{"name":"endoplasmic reticulum receptor activity","type":"exact"}],"termid":"GO:0005045"}


id: PR:O13957
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H4.16c gene.","definition_xrefs":["UniProtKB:O13957","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H4.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.16c","synonyms":[{"name":"Spom972h-SPAC23H4.16c","type":"exact"}],"termid":"PR:O13957"}


id: GO:1904464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of matrix metallopeptidase secretion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:8679543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"matrix metallopeptidase secretion","termid":"GO:1990773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of matrix metallopeptidase secretion","synonyms":[{"name":"regulation of MMP secretion","type":"exact"},{"name":"regulation of matrix metalloproteinase secretion","type":"narrow"}],"termid":"GO:1904464"}


id: PBO:0059368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18C","termid":"PBO:0059368"}


id: PBO:0080627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 74","termid":"PBO:0080627"}


id: GO:0008389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coumarin + O2 + NADPH + H+ = hydroxycoumarin + H2O + NADP+.","definition_xrefs":["PMID:2733794","PMID:10490589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"coumarin 7-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-76453","Reactome:R-HSA-211881"],"synonyms":[{"name":"cytochrome P450 CYP2A5","type":"narrow"}],"termid":"GO:0008389"}


id: PBO:0113275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane arginine permease; transceptor that senses extracellular basic amino acids; negative regulator of biofilm formation; requires phosphatidyl ethanolamine (PE) for localization, exclusively associated with lipid rafts; mutation confers canavanine resistance; CAN1 has a paralog, ALP1, that arose from the whole genome duplication","termid":"PBO:0113275"}


id: PBO:0070914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 22","termid":"PBO:0070914"}


id: GO:0008463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formyl-L-methionine + H2O = L-methionine + formate.","definition_xrefs":["EC:3.5.1.31","RHEA:17781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"formylmethionine deformylase activity","secondary_identifiers":["KEGG_REACTION:R00653","MetaCyc:FORMYLMETHIONINE-DEFORMYLASE-RXN"],"synonyms":[{"name":"N-formyl-L-methionine amidohydrolase activity","type":"related"}],"termid":"GO:0008463"}


id: PBO:0091822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf3/6 docking factor","termid":"PBO:0091822"}


id: PBO:0075602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOC domain containing 1","termid":"PBO:0075602"}


id: PBO:0028963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_meiotic_interphase_before_premeiotic_DNA_replication","termid":"PBO:0028963"}


id: PBO:0029416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_palmitoylation_during_meiosis","termid":"PBO:0029416"}


id: PBO:0067674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 856, pseudogene","termid":"PBO:0067674"}


id: GO:0046866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tetraterpenoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tetraterpenoids are terpenoids with eight isoprene units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"tetraterpenoid transport","termid":"GO:0046866"}


id: PBO:0084051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein for polarity-establishment protein Cdc42p; implicated in control of septin organization, pheromone response, and haploid invasive growth; regulated by Pho85p and Cdc28p; RGA2 has a paralog, RGA1, that arose from the whole genome duplication","termid":"PBO:0084051"}


id: GO:0070350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of white fat cell proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fat cell proliferation","termid":"GO:0070344"},{"relation_name":"regulates","term_name":"white fat cell proliferation","termid":"GO:0070343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of white fat cell proliferation","synonyms":[{"name":"regulation of white adipocyte proliferation","type":"exact"},{"name":"regulation of white adipose cell proliferation","type":"exact"}],"termid":"GO:0070350"}


id: GO:0061993
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + H+(out) = Ca2+(out) + H+(in).","definition_xrefs":["GOC:bhm","PMID:19098009","PMID:28645169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"calcium:proton antiporter complex","synonyms":[{"name":"CAX1 homodimer","type":"narrow"},{"name":"CAX1-CAX3 complex","type":"narrow"},{"name":"CAX3 homodimer","type":"narrow"}],"termid":"GO:0061993"}


id: GO:0035942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of dehydroepiandrosterone (3beta-hydroxyandrost-5-en-17-one) into the circulatory system.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"dehydroepiandrosterone secretion","synonyms":[{"name":"3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"DHEA secretion","type":"exact"},{"name":"dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:0035942"}


id: PBO:0075320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 pseudogene 2","termid":"PBO:0075320"}


id: GO:1902215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-4-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:17210636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-4-mediated signaling pathway","termid":"GO:1902214"},{"relation_name":"negatively_regulates","term_name":"interleukin-4-mediated signaling pathway","termid":"GO:0035771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-4-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-4-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-4-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-4-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-4-mediated signalling pathway","type":"exact"}],"termid":"GO:1902215"}


id: GO:0110017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where translation initiation recruits the 40S ribosomal subunits in a cap and 5' end independent fashion before an AUG codon is encountered in an appropriate sequence context to initiate linear mRNA translation.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cap-independent translational initiation","termid":"GO:0002190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0002181","GO:0008150"],"is_obsolete":false,"name":"cap-independent translational initiation of linear mRNA","termid":"GO:0110017"}


id: PBO:0017867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage factor complex subunit Msi2","termid":"PBO:0017867"}


id: PBO:0051639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP3 pseudogene 2","termid":"PBO:0051639"}


id: PBO:0076394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adaptor 2A","termid":"PBO:0076394"}


id: FYPO:0003520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynylselenocysteine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased cellular hercynylselenocysteine level","termid":"FYPO:0003523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular hercynylselenocysteine level during vegetative growth","synonyms":[{"name":"increased cellular hercynylselenocysteine level during mitotic cell cycle","type":"related"},{"name":"increased hercynylselenocysteine level during vegetative growth","type":"exact"}],"termid":"FYPO:0003520"}


id: GO:0031120
data:
  {"annotated_genes":["SJAG_01234","SJAG_00083","SJAG_00088","SJAG_04754","SJAG_00566","SJAG_03572"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86131,91459,97262,102309,102368,110385],"is_not":false,"summary":null,"term":"GO:0031120"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in an snRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthesis","termid":"GO:0001522"},{"relation_name":"is_a","term_name":"snRNA modification","termid":"GO:0040031"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00088":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_03572":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016073","GO:0008150"],"is_obsolete":false,"name":"snRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031120","terms_by_termid":{"GO:0031120":null}}


id: PBO:0065852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 3","termid":"PBO:0065852"}


id: GO:0141076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or disrupts a TRAF-mediated signal transduction in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22407319","PMID:20335533","PMID:31311877"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression of host TRAF-mediated signal transduction (obsolete GO:0141076)","synonyms":[{"name":"disruption of host TRAF-mediated signal transduction","type":"exact"},{"name":"inhibition of host TRAF-mediated signal transduction","type":"exact"},{"name":"inhibition of host TRAFs","type":"narrow"},{"name":"negative regulation of host TRAF-mediated signal transduction","type":"exact"},{"name":"suppression of host TRAF activity","type":"narrow"},{"name":"suppression of host TRAF-mediated signal transduction","type":"exact"},{"name":"suppression of host tumor necrosis factor receptor-associated factor signaling","type":"exact"},{"name":"symbiont-mediated suppression of host TRAF-mediated signal transduction","type":"related"}],"termid":"GO:0141076"}


id: GO:0032574
data:
  {"annotated_genes":["SJAG_02242"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95983],"is_not":false,"summary":null,"term":"GO:0032574"}]},"cv_name":"molecular_function","definition":"Unwinding of an RNA helix in the 5' to 3' direction, driven by ATP hydrolysis.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA helicase activity","termid":"GO:0003724"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"5'-3' RNA helicase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0032575","Reactome:R-HSA-9682695","Reactome:R-HSA-9694265"],"synonyms":[{"name":"5' to 3' RNA helicase activity","type":"exact"},{"name":"ATP-dependent 5' to 3' RNA helicase activity","type":"exact"},{"name":"ATP-dependent 5'-3' RNA helicase activity","type":"exact"}],"termid":"GO:0032574","terms_by_termid":{"GO:0032574":null}}


id: PBO:0047190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 207 member C, pseudogene","termid":"PBO:0047190"}


id: PR:P40923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yox1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF complex negative regulatory component yox1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.13c","synonyms":[{"name":"Spom972h-yox1","type":"exact"}],"termid":"PR:P40923"}


id: GO:0051747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methyl-dCpdG DNA + H2O = dCpdG DNA + methanol. This reaction is the hydrolytic removal of the methyl group on the 5 position of cytosine in DNA.","definition_xrefs":["PMID:10050851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"},{"relation_name":"is_a","term_name":"DNA demethylase activity","termid":"GO:0035514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140097","GO:0016787"],"is_obsolete":false,"name":"cytosine C-5 DNA demethylase activity","synonyms":[{"name":"DNA demethylase activity","type":"broad"},{"name":"DNA methyltransferase activity acting on cytosine C-5","type":"exact"},{"name":"hydrolytic DNA demethylase activity","type":"broad"}],"termid":"GO:0051747"}


id: GO:0062028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of stress granule assembly, the aggregation, arrangement and bonding together of proteins and RNA molecules to form a stress granule.","definition_xrefs":["PMID:20180778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"stress granule assembly","termid":"GO:0034063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of stress granule assembly","termid":"GO:0062028"}


id: GO:0120212
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A centrosome-based structure consisting of two cylindrical microtubule-based centrioles and associated components which anchors the flagellum to the sperm head.","definition_xrefs":["GOC:krc","PMID:24415959","PMID:30032984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm head-tail coupling apparatus","secondary_identifiers":["MP:0009830"],"synonyms":[{"name":"HTCA","type":"related"},{"name":"head-tail coupling apparatus","type":"exact"},{"name":"implantation fossa","type":"related"},{"name":"sperm connecting piece","type":"related"},{"name":"sperm neck","type":"related"}],"termid":"GO:0120212"}


id: PBO:0090148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin, C-terminal","termid":"PBO:0090148"}


id: FYPO:0005845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000882"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased silent mating-type cassette histone H3-K9 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0005845"}


id: PBO:0051464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 11-55 (non-functional)","termid":"PBO:0051464"}


id: GO:0005332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: gamma-aminobutyric acid(out) + Na+(out) + Cl-(out) = gamma-aminobutyric acid(in) + Na+(in) + Cl(in).","definition_xrefs":["PMID:7589472","PMID:7861179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid transmembrane transporter activity","termid":"GO:0015185"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"},{"relation_name":"is_a","term_name":"monocarboxylate:sodium symporter activity","termid":"GO:0140161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"gamma-aminobutyric acid:sodium:chloride symporter activity","secondary_identifiers":["TC:2.A.22.3.2","Reactome:R-HSA-444007"],"synonyms":[{"name":"4-aminobutanoate:sodium symporter activity","type":"exact"},{"name":"4-aminobutyrate:sodium symporter activity","type":"exact"},{"name":"GABA:sodium symporter activity","type":"exact"},{"name":"betaine/GABA:sodium symporter activity","type":"exact"},{"name":"gamma-aminobutyric acid:sodium symporter activity","type":"exact"},{"name":"sodium/chloride-dependent GABA transporter activity","type":"broad"}],"termid":"GO:0005332"}


id: GO:0010795
data:
  {"annotated_genes":["SJAG_01672"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ubiquinone biosynthesis. Ubiquinone biosynthesis consists of the chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"regulates","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006744"}],"interesting_parent_ids":["GO:0008150","GO:0006744","GO:0044281"],"is_obsolete":false,"name":"regulation of ubiquinone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010795","terms_by_termid":{"GO:1904775":null}}


id: PBO:0083962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"General transcription elongation factor TFIIS; enables RNA polymerase II to read through blocks to elongation by stimulating cleavage of nascent transcripts stalled at transcription arrest sites; maintains RNAPII elongation activity on ribosomal protein genes during conditions of transcriptional stress","termid":"PBO:0083962"}


id: GO:0015638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a microcin from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"microcin transmembrane transporter activity","synonyms":[{"name":"microcin uptake permease activity","type":"exact"}],"termid":"GO:0015638"}


id: PBO:0110487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCSH beta subunit of glucosidase II","termid":"PBO:0110487"}


id: PBO:0056967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 24-1","termid":"PBO:0056967"}


id: GO:0044256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The whole of the physical, chemical, and biochemical processes carried out by living organisms to break down ingested proteins into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestion","termid":"GO:0007586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein digestion","termid":"GO:0044256"}


id: SO:0000810
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone invalidated because it is chimeric.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated_by_chimeric_cDNA","termid":"SO:0000362"},{"relation_name":"is_a","term_name":"invalidated_cDNA_clone","termid":"SO:0000809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chimeric_cDNA_clone","synonyms":[{"name":"chimeric cDNA clone","type":"exact"}],"termid":"SO:0000810"}


id: PBO:0058993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTOR associated protein, LST8 homolog","termid":"PBO:0058993"}


id: PBO:0068764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1","termid":"PBO:0068764"}


id: GO:0047554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-2H-pyran-4,6-dicarboxylate + H2O = 4-carboxy-2-hydroxyhexa-2,4-dienedioate + H+.","definition_xrefs":["EC:3.1.1.57","RHEA:10644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"2-pyrone-4,6-dicarboxylate lactonase activity","secondary_identifiers":["KEGG_REACTION:R04277","MetaCyc:RXN-2462"],"synonyms":[{"name":"2-pyrone-4,6-dicarboxylate lactonohydrolase activity","type":"related"}],"termid":"GO:0047554"}


id: GO:0021865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The mitotic division of a radial glial cell giving rise to two new radial glial cells in the forebrain.","definition_xrefs":["GOC:dgh","GOC:jid","PMID:16226447","GOC:dph","GO_REF:0000021","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete symmetric radial glial cell division in forebrain (obsolete GO:0021865)","termid":"GO:0021865"}


id: MOD:01983
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N,N-dimethyllglycine.","definition_xrefs":["ChEBI:17724","PubMed:23818633","PubMed:23978223","RESID:AA0620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated glycine","termid":"MOD:00714"},{"relation_name":"is_a","term_name":"alpha-amino dimethylated residue","termid":"MOD:01686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethylglycine","synonyms":[{"name":"(dimethylamino)ethanoic acid","type":"exact"},{"name":"1-carboxy-N,N-dimethylaminomethane","type":"exact"},{"name":"2-(dimethylamino)acetic acid","type":"exact"},{"name":"MOD_RES N,N-dimethylglycine","type":"exact"},{"name":"vitamin B16","type":"exact"}],"termid":"MOD:01983"}


id: PBO:0050663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 1 like","termid":"PBO:0050663"}


id: PBO:0036344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotase Ura2","termid":"PBO:0036344"}


id: PBO:0017814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic amino acid transmembrane transporter (predicted)","termid":"PBO:0017814"}


id: PBO:0053522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 517","termid":"PBO:0053522"}


id: GO:0031738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a XCR1 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"XCR1 chemokine receptor binding","synonyms":[{"name":"XCR1 chemokine receptor ligand","type":"narrow"},{"name":"lymphotactin receptor binding","type":"exact"}],"termid":"GO:0031738"}


id: PBO:0083706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-localized protein of unknown function","termid":"PBO:0083706"}


id: GO:0005977
data:
  {"annotated_genes":["SJAG_02076","SJAG_04963","SJAG_02178","SJAG_00963","SJAG_00115","SJAG_01783","SJAG_03851","SJAG_01089","SJAG_06309","SJAG_01561","SJAG_01209","SJAG_01376"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110529,114552],"is_not":false,"summary":null,"term":"GO:0005977"},{"annotations":[104992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[99405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[94708,96384,93714,104739,86201,105862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[87039,77736],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045719"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha-(1->4) glycosidic linkage, joined together by alpha-(1->6) glycosidic linkages.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy reserve metabolic process","termid":"GO:0006112"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00963":null,"SJAG_01089":null,"SJAG_01209":null,"SJAG_01376":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_02076":null,"SJAG_02178":null,"SJAG_03851":null,"SJAG_04963":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"glycogen metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycogen metabolism","type":"exact"}],"termid":"GO:0005977","terms_by_termid":{"GO:0005977":null,"GO:0005978":null,"GO:0005980":null,"GO:0045719":null,"GO:0061723":null}}


id: GO:0106184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of other compounds not included in EC:7.1 through EC:7.5 .","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocation activity acting on other compounds (obsolete GO:0106184)","secondary_identifiers":["EC:7.6.-.-"],"termid":"GO:0106184"}


id: PBO:0081665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 587","termid":"PBO:0081665"}


id: PBO:0005361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin For3","termid":"PBO:0005361"}


id: GO:0051378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"amine binding","termid":"GO:0043176"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"serotonin binding","synonyms":[{"name":"5-hydroxytryptamine binding","type":"exact"}],"termid":"GO:0051378"}


id: GO:1903306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["GOC:pad","GO_REF:0000058","PMID:12526776","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"negatively_regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"negative regulation of regulated secretory pathway","synonyms":[{"name":"down regulation of regulated secretory pathway","type":"exact"},{"name":"down-regulation of regulated secretory pathway","type":"exact"},{"name":"downregulation of regulated secretory pathway","type":"exact"},{"name":"inhibition of regulated secretory pathway","type":"narrow"}],"termid":"GO:1903306"}


id: PBO:0036494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate lyase superfamily, bacterial 3-carboxy-cis,cis-muconate cycloisomerase related","termid":"PBO:0036494"}


id: GO:0035426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information between the extracellular matrix and a cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extracellular matrix-cell signaling","synonyms":[{"name":"cell-extracellular matrix signalling","type":"exact"},{"name":"extracellular matrix-cell signalling","type":"exact"}],"termid":"GO:0035426"}


id: GO:0015223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed transport of vitamins or cofactors into, out of or within a cell, or between cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete vitamin or cofactor transporter activity (obsolete GO:0015223)","synonyms":[{"name":"vitamin or cofactor transporter activity","type":"exact"},{"name":"vitamin/cofactor transporter activity","type":"exact"}],"termid":"GO:0015223"}


id: PBO:0075352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sosondowah ankyrin repeat domain family member C","termid":"PBO:0075352"}


id: PBO:0004062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxalase I","termid":"PBO:0004062"}


id: GO:0015139
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92668],"is_not":false,"summary":null,"term":"GO:0015139"}]},"cv_name":"molecular_function","definition":"Enables the transfer of alpha-ketoglutarate from one side of a membrane to the other. Alpha-ketoglutarate (or oxoglutarate) is a compound with important roles in carbohydrate and amino acid metabolism, especially in transamination reactions and as a component of the TCA cycle.","definition_xrefs":["GOC:ai","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"alpha-ketoglutarate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-372480"],"synonyms":[{"name":"2-oxoglutarate transporter activity","type":"exact"}],"termid":"GO:0015139","terms_by_termid":{"GO:0015139":null}}


id: PBO:0064364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyamine modulated factor 1 binding protein 1","termid":"PBO:0064364"}


id: PBO:0051726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitory synaptic factor 2A","termid":"PBO:0051726"}


id: GO:0051646
data:
  {"annotated_genes":["SJAG_04003","SJAG_03416","SJAG_00031","SJAG_00368","SJAG_02848","SJAG_02509","SJAG_00655","SJAG_00079","SJAG_02384","SJAG_01741"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100739,102678],"is_not":false,"summary":null,"term":"GO:0051646"},{"annotations":[87010,102675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051654"},{"annotations":[98862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034643"},{"annotations":[106963,103304,98863,103516,96055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048312"},{"annotations":[108223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048311"},{"annotations":[86089,98865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000001"}]},"cv_name":"biological_process","definition":"Any process in which a mitochondrion or mitochondria are transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00079":null,"SJAG_00368":null,"SJAG_00655":null,"SJAG_01741":null,"SJAG_02384":null,"SJAG_02509":null,"SJAG_02848":null,"SJAG_03416":null,"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrion localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of mitochondria localization","type":"exact"},{"name":"establishment and maintenance of mitochondrion localization","type":"exact"},{"name":"localization of mitochondria","type":"exact"},{"name":"localization of mitochondrion","type":"exact"},{"name":"mitochondria localization","type":"exact"},{"name":"mitochondrial localization","type":"exact"},{"name":"mitochondrion localisation","type":"exact"}],"termid":"GO:0051646","terms_by_termid":{"GO:0000001":null,"GO:0034643":null,"GO:0048311":null,"GO:0048312":null,"GO:0051646":null,"GO:0051654":null}}


id: GO:1905017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isoleucine-tRNA ligase activity.","definition_xrefs":["PMID:1665486","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ligase activity","termid":"GO:0051351"},{"relation_name":"is_a","term_name":"regulation of aminoacyl-tRNA ligase activity","termid":"GO:1903630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of isoleucine-tRNA ligase activity","synonyms":[{"name":"activation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"narrow"},{"name":"activation of isoleucine translase activity","type":"narrow"},{"name":"activation of isoleucine-tRNA ligase activity","type":"narrow"},{"name":"activation of isoleucine-tRNA synthetase activity","type":"narrow"},{"name":"activation of isoleucine-transfer RNA ligase activity","type":"narrow"},{"name":"activation of isoleucyl-tRNA synthetase activity","type":"narrow"},{"name":"activation of isoleucyl-transfer RNA synthetase activity","type":"narrow"},{"name":"activation of isoleucyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"positive regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"positive regulation of isoleucine translase activity","type":"exact"},{"name":"positive regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"positive regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"positive regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"up regulation of isoleucine translase activity","type":"exact"},{"name":"up regulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"up regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"up regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"up regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"up regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"up regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up-regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"up-regulation of isoleucine translase activity","type":"exact"},{"name":"up-regulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"up-regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"up-regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"up-regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"upregulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"upregulation of isoleucine translase activity","type":"exact"},{"name":"upregulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"upregulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"upregulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"upregulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"upregulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"upregulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"}],"termid":"GO:1905017"}


id: PBO:0084727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein of unknown function; associates with mitochondrial ribosome; localizes to the inner membrane with the C terminus facing the intermembrane space; ortholog of human RMND1, mutation in which is implicated in infantile encephaloneuromyopathy and defective mitochondrial translation","termid":"PBO:0084727"}


id: PBO:0052701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 2","termid":"PBO:0052701"}


id: GO:0120307
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extended membranous thread which firmly connects the plasma membrane to the cell wall during plasmolysis such that the plasma membrane does not separate from the cell wall completely.","definition_xrefs":["GOC:krc","PMID:32397402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Hechtian strand","secondary_identifiers":["Wikipedia:Hechtian_strand"],"termid":"GO:0120307"}


id: GO:0072316
data:
  {"annotated_genes":["SJAG_02718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107402],"is_not":false,"summary":null,"term":"GO:0072316"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alpha-glucans in the ascus wall that contributes to the release of ascospores from the ascus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan catabolic process","termid":"GO:0030980"},{"relation_name":"is_a","term_name":"extracellular polysaccharide catabolic process involved in ascospore release from ascus","termid":"GO:0072000"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"alpha-glucan catabolic process involved in ascospore release from ascus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alpha-glucan breakdown involved in ascospore release from ascus","type":"exact"},{"name":"alpha-glucan catabolism involved in ascospore release from ascus","type":"exact"},{"name":"alpha-glucan degradation involved in ascospore release from ascus","type":"exact"}],"termid":"GO:0072316","terms_by_termid":{"GO:0072316":null}}


id: PBO:0045120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMRT like family C1","termid":"PBO:0045120"}


id: PBO:0088341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin II essential light chain","termid":"PBO:0088341"}


id: GO:0030817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP biosynthetic process (obsolete GO:0030817)","synonyms":[{"name":"regulation of 3',5' cAMP biosynthesis","type":"exact"},{"name":"regulation of 3',5' cAMP biosynthetic process","type":"exact"},{"name":"regulation of 3',5'-cAMP biosynthesis","type":"exact"},{"name":"regulation of 3',5'-cAMP biosynthetic process","type":"exact"},{"name":"regulation of adenosine 3',5'-cyclophosphate biosynthesis","type":"exact"},{"name":"regulation of adenosine 3',5'-cyclophosphate biosynthetic process","type":"exact"},{"name":"regulation of cAMP anabolism","type":"exact"},{"name":"regulation of cAMP biosynthesis","type":"exact"},{"name":"regulation of cAMP formation","type":"exact"},{"name":"regulation of cAMP synthesis","type":"exact"},{"name":"regulation of cyclic AMP biosynthesis","type":"exact"},{"name":"regulation of cyclic AMP biosynthetic process","type":"exact"}],"termid":"GO:0030817"}


id: PBO:0075451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA3 antisense RNA 1 (head to head)","termid":"PBO:0075451"}


id: PBO:0082246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of succinyl-CoA ligase; succinyl-CoA ligase is a mitochondrial enzyme of the TCA cycle that catalyzes the nucleotide-dependent conversion of succinyl-CoA to succinate; phosphorylated","termid":"PBO:0082246"}


id: PBO:0027701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleolar_chromatin_organization_resulting_in_peripheral_chromatin_distribution","termid":"PBO:0027701"}


id: GO:0098560
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the late endosome membrane that faces the cytoplasm.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of endosome membrane","termid":"GO:0010009"},{"relation_name":"part_of","term_name":"late endosome membrane","termid":"GO:0031902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005768","GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"cytoplasmic side of late endosome membrane","synonyms":[{"name":"external leaflet of late endosome membrane","type":"exact"},{"name":"external side of late endosome membrane","type":"exact"}],"termid":"GO:0098560"}


id: PBO:0045309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 3 beta","termid":"PBO:0045309"}


id: PBO:0001894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase Gst3","termid":"PBO:0001894"}


id: MOD:01252
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00933. Remap to MOD:00933.","definition_xrefs":["Unimod:319#R","PubMed:9448752"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01252 5-hydro-5-methylimidazol-4-one, methylglyoxal arginine adduct (+54 amu) (obsolete MOD:01252)","synonyms":[{"name":"Delta:H(2)C(3)O(1)","type":"related"},{"name":"MDA adduct +54","type":"related"}],"termid":"MOD:01252"}


id: FYPO:0001324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"},{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during vegetative growth","synonyms":[{"name":"decreased protein accumulation during vegetative growth","type":"related"},{"name":"decreased protein level during mitotic cell cycle","type":"related"},{"name":"reduced protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0001324"}


id: PBO:0002927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein sorting protein (predicted)","termid":"PBO:0002927"}


id: PBO:0076219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite oxidase","termid":"PBO:0076219"}


id: GO:0061981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-3-hydroxykynurenine + H2O = 3-hydroxyanthranilate + L-alanine.","definition_xrefs":["PMID:17300176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxykynureninase activity","secondary_identifiers":["RHEA:25143"],"termid":"GO:0061981"}


id: GO:0071271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-butanol, an alkyl primary alcohol with the formula C4H10O.","definition_xrefs":["GOC:mah","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"1-butanol metabolic process","termid":"GO:0071270"},{"relation_name":"is_a","term_name":"fatty alcohol biosynthetic process","termid":"GO:1903175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"1-butanol biosynthetic process","synonyms":[{"name":"1-butanol anabolism","type":"exact"},{"name":"1-butanol biosynthesis","type":"exact"},{"name":"1-butanol formation","type":"exact"},{"name":"1-butanol synthesis","type":"exact"},{"name":"butan-1-ol biosynthetic process","type":"exact"},{"name":"butanol biosynthetic process","type":"broad"}],"termid":"GO:0071271"}


id: PBO:0066681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLIG1 pseudogene 3","termid":"PBO:0066681"}


id: PBO:0087167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C37","termid":"PBO:0087167"}


id: PBO:0026789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_heterothallic_h-_cells","termid":"PBO:0026789"}


id: GO:1990376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter in response to nitrogen starvation that results in negative regulation of mitotic G1/S transition.","definition_xrefs":["PMID:9135083"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G1/S transition of mitotic cell cycle by positive regulation of transcription from RNA polymerase II promoter in response to nitrogen starvation (obsolete GO:1990376)","termid":"GO:1990376"}


id: PBO:0091264
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Csx1-Interacting Protein","termid":"PBO:0091264"}


id: PBO:0088073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease, deubiquitinates Ub-protein moieties; interacts with proteins that function in rRNA production and ribosome biogenesis via its intrinsically disordered regions; stabilizes Rpa190p by deubiquitination; controls PCNA deubiquitylation; may regulate silencing by acting on Sir4p; involved in posttranscriptionally regulating Gap1p, possibly other transporters; localized to the nucleolus; null mutant phenotypes are functionally complemented by human USP36","termid":"PBO:0088073"}


id: PBO:0086834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function with similarity to helicases; YLR462W is within the telomere on the right arm of chromosome XII","termid":"PBO:0086834"}


id: GO:0047914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histamine + L-glutamate + ATP = N(alpha)-gamma-L-glutamylhistamine + products of ATP breakdown.","definition_xrefs":["EC:6.3.2.18","MetaCyc:GAMMA-GLUTAMYLHISTAMINE-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"gamma-glutamylhistamine synthase activity","secondary_identifiers":["RHEA:18881"],"synonyms":[{"name":"L-glutamate:histamine ligase activity","type":"related"},{"name":"g-glutamylhistamine synthase activity","type":"exact"},{"name":"gamma-GHA synthetase activity","type":"related"},{"name":"gamma-glutaminylhistamine synthetase activity","type":"related"}],"termid":"GO:0047914"}


id: PBO:0060197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 19, oligomeric","termid":"PBO:0060197"}


id: PBO:0040635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BARX1 divergent transcript","termid":"PBO:0040635"}


id: GO:0048614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the post-embryonic phase, by which the anatomical structures of the ectodermal gut are generated and organized.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"ectodermal digestive tract morphogenesis","termid":"GO:0048567"},{"relation_name":"part_of","term_name":"post-embryonic ectodermal digestive tract development","termid":"GO:0048612"},{"relation_name":"part_of","term_name":"post-embryonic digestive tract morphogenesis","termid":"GO:0048621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic ectodermal digestive tract morphogenesis","synonyms":[{"name":"post-embryonic ectodermal gut morphogenesis","type":"related"}],"termid":"GO:0048614"}


id: PBO:0068266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 2C, pseudogene","termid":"PBO:0068266"}


id: GO:0034668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha4 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"integrin alpha4-beta1 complex","synonyms":[{"name":"ITGA4-ITGB1 complex","type":"narrow"},{"name":"VLA-4 complex","type":"exact"},{"name":"alpha4-beta1 integrin complex","type":"exact"}],"termid":"GO:0034668"}


id: PBO:0069256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 511, pseudogene","termid":"PBO:0069256"}


id: PR:O74360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga4 gene.","definition_xrefs":["UniProtKB:O74360","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-type GTPase-activating protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.03","synonyms":[{"name":"Spom972h-rga4","type":"exact"}],"termid":"PR:O74360"}


id: GO:0008503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with benzodiazepines, a class of drugs with hypnotic, anxiolytic, anticonvulsive, amnestic and myorelaxant properties, to initiate a change in cell activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"benzodiazepine receptor activity","termid":"GO:0008503"}


id: PBO:0040264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 101","termid":"PBO:0040264"}


id: PBO:0085164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nudix hydrolase family member with ADP-ribose pyrophosphatase activity; shown to metabolize O-acetyl-ADP-ribose to AMP and acetylated ribose 5'-phosphate","termid":"PBO:0085164"}


id: PBO:0040266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atlastin GTPase 1","termid":"PBO:0040266"}


id: PBO:0050618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 10","termid":"PBO:0050618"}


id: MOD:01649
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tyrosine removal","termid":"MOD:01649"}


id: PBO:0057106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 196b","termid":"PBO:0057106"}


id: PBO:0084435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; transcription factor; part of the complex locus MAL6, plays a positive role in the regulation of maltose fermentation","termid":"PBO:0084435"}


id: FYPO:0002507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abolished protein palmitoylation","termid":"FYPO:0002504"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during vegetative growth","termid":"FYPO:0002506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein palmitoylation during vegetative growth","synonyms":[{"name":"abolished protein palmitoylation during mitotic cell cycle","type":"related"},{"name":"protein palmitoylation abolished during vegetative growth","type":"exact"},{"name":"protein palmitoylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002507"}


id: PBO:0082818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved NAD+ dependent histone deacetylase of the Sirtuin family; deacetylation targets are primarily nuclear proteins; required for telomere hypercluster formation in quiescent yeast cells; involved in regulation of lifespan; plays roles in silencing at HML, HMR, telomeres, and rDNA; negatively regulates initiation of DNA replication; functions as regulator of autophagy like mammalian homolog SIRT1, and also of mitophagy","termid":"PBO:0082818"}


id: PBO:0041653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 3","termid":"PBO:0041653"}


id: PBO:0077450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 183A","termid":"PBO:0077450"}


id: PR:O13758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ntr2 gene.","definition_xrefs":["UniProtKB:O13758","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17A2.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.08c","synonyms":[{"name":"Spom972h-ntr2","type":"exact"}],"termid":"PR:O13758"}


id: PBO:0068448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 22, pseudogene","termid":"PBO:0068448"}


id: FYPO:0001293
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell wall biogenesis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cell wall biogenesis","synonyms":[{"name":"normal cell wall biogenesis during mitotic cell cycle","type":"related"},{"name":"normal cell wall biogenesis during vegetative growth","type":"exact"},{"name":"normal fungal-type cell wall biogenesis","type":"exact"}],"termid":"FYPO:0001293"}


id: SO:0001005
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region where the DNA does not contain an equal distrubution of all four possible nucleotides or does not contain all four nucleotides.","direct_ancestors":[{"relation_name":"has_quality","term_name":"low_complexity","termid":"SO:0001004"},{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low_complexity_region","synonyms":[{"name":"low complexity region","type":"exact"}],"termid":"SO:0001005"}


id: GO:1901714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of urea catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide catabolic process","termid":"GO:0034253"},{"relation_name":"is_a","term_name":"regulation of urea catabolic process","termid":"GO:0034254"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of nitrogen cycle metabolic process","termid":"GO:1903316"},{"relation_name":"positively_regulates","term_name":"urea catabolic process","termid":"GO:0043419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"positively_regulates","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0044281","GO:0071941","GO:0008150"],"is_obsolete":false,"name":"positive regulation of urea catabolic process","synonyms":[{"name":"activation of urea breakdown","type":"exact"},{"name":"activation of urea catabolic process","type":"narrow"},{"name":"activation of urea catabolism","type":"exact"},{"name":"activation of urea decomposition","type":"exact"},{"name":"activation of urea degradation","type":"exact"},{"name":"positive regulation of urea breakdown","type":"exact"},{"name":"positive regulation of urea catabolism","type":"exact"},{"name":"positive regulation of urea decomposition","type":"exact"},{"name":"positive regulation of urea degradation","type":"exact"},{"name":"up regulation of urea breakdown","type":"exact"},{"name":"up regulation of urea catabolic process","type":"exact"},{"name":"up regulation of urea catabolism","type":"exact"},{"name":"up regulation of urea decomposition","type":"exact"},{"name":"up regulation of urea degradation","type":"exact"},{"name":"up-regulation of urea breakdown","type":"exact"},{"name":"up-regulation of urea catabolic process","type":"exact"},{"name":"up-regulation of urea catabolism","type":"exact"},{"name":"up-regulation of urea decomposition","type":"exact"},{"name":"up-regulation of urea degradation","type":"exact"},{"name":"upregulation of urea breakdown","type":"exact"},{"name":"upregulation of urea catabolic process","type":"exact"},{"name":"upregulation of urea catabolism","type":"exact"},{"name":"upregulation of urea decomposition","type":"exact"},{"name":"upregulation of urea degradation","type":"exact"}],"termid":"GO:1901714"}


id: _global:immediately_preceded_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"preceded_by","termid":"_global:preceded_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_preceded_by","secondary_identifiers":["RO:0002087"],"termid":"_global:immediately_preceded_by"}


id: FYPO:0000042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell requires sulfite in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for sulfite","synonyms":[{"name":"growth auxotrophic for sulfite during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for sulfite during vegetative growth","type":"exact"},{"name":"growth auxotrophic for sulphite","type":"exact"},{"name":"sulfite auxotrophy","type":"exact"}],"termid":"FYPO:0000042"}


id: GO:0016785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a selenium-containing group from one compound (donor) to another (acceptor).","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"selenotransferase activity","secondary_identifiers":["GO:0016786","EC:2.9.1.-"],"synonyms":[{"name":"transferase activity, transferring selenium-containing groups","type":"exact"}],"termid":"GO:0016785"}


id: PBO:0075459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA8 antisense RNA 1 (head to head)","termid":"PBO:0075459"}


id: GO:0075527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which bases in viral mRNA are chemically altered during viral transcription. This is usually the incorporation of 1 - 6 additional nucleotides, which shifts the reading frame, allowing the generation of different protein products or through a specific nucleotide change that eliminates the termination codon.","definition_xrefs":["VZ:857","PMID:1629949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral RNA editing","synonyms":[{"name":"RNA editing involved in viral mRNA transcription","type":"exact"}],"termid":"GO:0075527"}


id: FYPO:0000771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which nuclear pore localization is normal (i.e. indistinguishable from wild type), resulting in a normal spatial arrangement of nuclear pores within the nuclear envelope.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal nuclear pore localization","synonyms":[{"name":"normal NPC localization","type":"exact"},{"name":"normal nuclear pore complex localization","type":"exact"},{"name":"normal nuclear pore distribution","type":"exact"},{"name":"normal nuclear pore localisation","type":"exact"},{"name":"normal nuclear pore localization during mitotic cell cycle","type":"related"},{"name":"normal nuclear pore localization during vegetative growth","type":"exact"}],"termid":"FYPO:0000771"}


id: GO:0061482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an irinotecan stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to irinotecan","termid":"GO:0061482"}


id: PBO:0045112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin matrix acidic phosphoprotein 1","termid":"PBO:0045112"}


id: GO:0019005
data:
  {"annotated_genes":["SJAG_02162","SJAG_03219","SJAG_02651","SJAG_00341","SJAG_00192","SJAG_03651","SJAG_02591","SJAG_01022","SJAG_02044","SJAG_00439","SJAG_00615","SJAG_02822"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84696,86714,91648,93880,94559,98968,101090,111881],"is_not":false,"summary":null,"term":"GO:0019005"},{"annotations":[86713,90452,105170,93879,106408,100945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043224"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00341":null,"SJAG_00439":null,"SJAG_00615":null,"SJAG_01022":null,"SJAG_02044":null,"SJAG_02162":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:SCF_complex"],"synonyms":[{"name":"CDL1 complex","type":"exact"},{"name":"CRL1 complex","type":"exact"},{"name":"Cul1-RING ubiquitin ligase complex","type":"exact"},{"name":"SCF complex","type":"exact"},{"name":"SCF complex substrate recognition subunit","type":"narrow"},{"name":"Skp1/Cul1/F-box protein complex","type":"exact"},{"name":"cullin-RING ligase 1","type":"exact"}],"termid":"GO:0019005","terms_by_termid":{"GO:0019005":null,"GO:0043224":null}}


id: GO:1905513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of short-term synaptic potentiation.","definition_xrefs":["GOC:TermGenie","PMID:15470145","GO_REF:0000058","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of short-term synaptic potentiation","termid":"GO:1905512"},{"relation_name":"negatively_regulates","term_name":"short-term synaptic potentiation","termid":"GO:1990926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of short-term synaptic potentiation","synonyms":[{"name":"down regulation of short-term synaptic potentiation","type":"exact"},{"name":"down regulation of synaptic facilitation","type":"exact"},{"name":"down-regulation of short-term synaptic potentiation","type":"exact"},{"name":"down-regulation of synaptic facilitation","type":"exact"},{"name":"downregulation of short-term synaptic potentiation","type":"exact"},{"name":"downregulation of synaptic facilitation","type":"exact"},{"name":"inhibition of short-term synaptic potentiation","type":"narrow"},{"name":"inhibition of synaptic facilitation","type":"narrow"},{"name":"negative regulation of synaptic facilitation","type":"exact"}],"termid":"GO:1905513"}


id: PBO:0081094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 20 pseudogene 3","termid":"PBO:0081094"}


id: GO:0021874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of Wnt protein to a receptor on the surface of the target cell that contributes to the self renewal of neuroblasts in the forebrain.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","PMID:16226447","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway","termid":"GO:0016055"},{"relation_name":"part_of","term_name":"forebrain neuroblast division","termid":"GO:0021873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Wnt signaling pathway involved in forebrain neuroblast division","synonyms":[{"name":"Wnt receptor signaling pathway involved in forebrain neuroblast division","type":"exact"},{"name":"Wnt receptor signalling pathway in forebrain neuroblast division","type":"exact"},{"name":"Wnt-activated signaling pathway involved in forebrain neuroblast division","type":"exact"}],"termid":"GO:0021874"}


id: PBO:0029061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuoles_present_in_increased_numbers","termid":"PBO:0029061"}


id: GO:0008747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylneuraminate = N-acetyl-D-mannosamine + pyruvate.","definition_xrefs":["RHEA:23296","EC:4.1.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acetylneuraminate lyase activity","secondary_identifiers":["MetaCyc:RXN0-7390","Reactome:R-HSA-4085217","KEGG_REACTION:R01811"],"synonyms":[{"name":"N-acetylneuraminate aldolase activity","type":"related"},{"name":"N-acetylneuraminate pyruvate-lyase (N-acetyl-D-mannosamine-forming)","type":"related"},{"name":"N-acetylneuraminate pyruvate-lyase activity","type":"related"},{"name":"N-acetylneuraminic acid aldolase activity","type":"related"},{"name":"N-acetylneuraminic acid lyase activity","type":"related"},{"name":"N-acetylneuraminic aldolase activity","type":"related"},{"name":"N-acetylneuraminic lyase activity","type":"related"},{"name":"NALase activity","type":"related"},{"name":"NANA lyase activity","type":"related"},{"name":"NPL","type":"related"},{"name":"acetylneuraminate lyase activity","type":"related"},{"name":"acetylneuraminate pyruvate-lyase activity","type":"related"},{"name":"neuraminate aldolase activity","type":"related"},{"name":"neuraminic acid aldolase activity","type":"related"},{"name":"neuraminic aldolase activity","type":"related"},{"name":"sialate lyase activity","type":"related"},{"name":"sialic acid aldolase activity","type":"related"},{"name":"sialic aldolase activity","type":"related"}],"termid":"GO:0008747"}


id: GO:0002098
data:
  {"annotated_genes":["SJAG_03616","SJAG_03677","SJAG_03896","SJAG_01024","SJAG_04113","SJAG_04367","SJAG_04175","SJAG_01302","SJAG_00579","SJAG_04756","SJAG_00186","SJAG_01418","SJAG_03932","SJAG_04704","SJAG_00235","SJAG_05023","SJAG_02302","SJAG_00358","SJAG_04452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83930,92163,101641,114707],"is_not":false,"summary":null,"term":"GO:0002098"},{"annotations":[90369,113044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[88891,104567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"},{"annotations":[114835,106247,105582,91571,96670,110073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002926"},{"annotations":[101938,92097,102970,104502,113275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002143"}]},"cv_name":"biological_process","definition":"The process in which a uridine in position 34 of a tRNA is post-transcriptionally modified.","definition_xrefs":["ISBN:155581073X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble base modification","termid":"GO:0002097"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00235":null,"SJAG_00358":null,"SJAG_00579":null,"SJAG_01024":null,"SJAG_01302":null,"SJAG_01418":null,"SJAG_02302":null,"SJAG_03616":null,"SJAG_03677":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_04113":null,"SJAG_04175":null,"SJAG_04367":null,"SJAG_04452":null,"SJAG_04704":null,"SJAG_04756":null,"SJAG_05023":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA wobble uridine modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002098","terms_by_termid":{"GO:0002098":null,"GO:0002143":null,"GO:0002926":null,"GO:0070899":null,"GO:1990799":null}}


id: GO:1901125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving candicidin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00101","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"candicidin metabolic process","synonyms":[{"name":"candicidin metabolism","type":"exact"}],"termid":"GO:1901125"}


id: GO:0007160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix via adhesion molecules.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-matrix adhesion","termid":"GO:0007160"}


id: PBO:0026818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_punctate_nuclear_protein_localization","termid":"PBO:0026818"}


id: PBO:0027947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_mitosis","termid":"PBO:0027947"}


id: PBO:0018256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus-end directed microtubule motor, dynein heavy chain Dhc1","termid":"PBO:0018256"}


id: PBO:0078029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 19 (non-functional)","termid":"PBO:0078029"}


id: GO:0021888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a hypothalamus gonadotrophin-releasing hormone neuron over time, from initial commitment of its fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron development","termid":"GO:0021884"},{"relation_name":"part_of","term_name":"hypothalamus gonadotrophin-releasing hormone neuron differentiation","termid":"GO:0021886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus gonadotrophin-releasing hormone neuron development","synonyms":[{"name":"hypothalamus gonadotropin-releasing hormone neuron development","type":"related"}],"termid":"GO:0021888"}


id: PBO:0069905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1196, pseudogene","termid":"PBO:0069905"}


id: GO:0001063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a plastid PEP-B RNA polymerase II specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH","PMID:20701995"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid PEP-B RNA polymerase activity (obsolete GO:0001063)","termid":"GO:0001063"}


id: PBO:0053317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 51","termid":"PBO:0053317"}


id: PBO:0047298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM, ARH/RhoGEF and pleckstrin domain protein 1","termid":"PBO:0047298"}


id: PBO:0086722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription; weak similarity with uridine kinases and with phosphoribokinases","termid":"PBO:0086722"}


id: PBO:0051288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-37 (non-functional)","termid":"PBO:0051288"}


id: PBO:0086567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YOR015W is not an essential gene","termid":"PBO:0086567"}


id: GO:0035807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of blood coagulation in another organism. Blood coagulation is the sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot.","definition_xrefs":["GOC:bf","GOC:fj","PMID:12362232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perturbation of blood coagulation in another organism","termid":"GO:0035806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of blood coagulation in another organism","synonyms":[{"name":"induction of blood clotting in another organism","type":"exact"},{"name":"positive regulation by organism of blood clotting in other organism","type":"exact"},{"name":"positive regulation by organism of blood coagulation in other organism","type":"exact"},{"name":"positive regulation of blood clotting in other organism","type":"exact"},{"name":"positive regulation of blood coagulation in another organism","type":"related"},{"name":"positive regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0035807"}


id: PR:Q9Y7Z7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Z7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L15, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.01c","synonyms":[{"name":"Spom972h-mrp15","type":"exact"}],"termid":"PR:Q9Y7Z7"}


id: GO:1900116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any negative regulation of signal transduction that takes place in extracellular region.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"extracellular regulation of signal transduction","termid":"GO:1900115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extracellular negative regulation of signal transduction","synonyms":[{"name":"down regulation of signal transduction in extracellular region","type":"exact"},{"name":"down-regulation of signal transduction in extracellular region","type":"exact"},{"name":"downregulation of signal transduction in extracellular region","type":"exact"},{"name":"extracellular inhibition of signaling pathway","type":"narrow"},{"name":"inhibition of signal transduction in extracellular region","type":"narrow"},{"name":"negative regulation of signaling pathway in extracellular region","type":"exact"},{"name":"negative regulation of signalling pathway in extracellular region","type":"exact"}],"termid":"GO:1900116"}


id: PBO:0112981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase; 3PG dehydrogenase that catalyzes the first step in serine and glycine biosynthesis; alpha-ketoglutarate reductase, converting alpha-ketoglutarate to D-2-hydroxyglutarate (D-2HG); directly phosphorylated by TORC1 in a Pib2-dependent manner; localizes to the cytoplasm; ER3 has a paralog, SER33, that arose from the whole genome duplication","termid":"PBO:0112981"}


id: PBO:0036175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_eMTOC_assembly","termid":"PBO:0036175"}


id: PBO:0004127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Usp (universal stress protein) family protein","termid":"PBO:0004127"}


id: PBO:0080760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked inhibitor of apoptosis","termid":"PBO:0080760"}


id: PBO:0050825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HYDIN pseudogene 1","termid":"PBO:0050825"}


id: PBO:0076634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 1 Y-linked pseudogene 1","termid":"PBO:0076634"}


id: PBO:0054330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1723","termid":"PBO:0054330"}


id: PBO:0082787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import steps for all mitochondrially directed proteins; promotes assembly and stability of the TOM complex","termid":"PBO:0082787"}


id: PBO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 19A","termid":"PBO:0044739"}


id: PBO:0056987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30e","termid":"PBO:0056987"}


id: GO:0075149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of signal transduction in response to host (obsolete GO:0075149)","synonyms":[{"name":"negative regulation of symbiont signal transduction in response to host","type":"exact"}],"termid":"GO:0075149"}


id: PBO:0040514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA wax alcohol acyltransferase 1","termid":"PBO:0040514"}


id: GO:0048322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become an axial mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate commitment","termid":"GO:0001710"},{"relation_name":"part_of","term_name":"axial mesodermal cell differentiation","termid":"GO:0048321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesodermal cell fate commitment","synonyms":[{"name":"axial mesoderm cell fate commitment","type":"exact"}],"termid":"GO:0048322"}


id: GO:0099108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Activation potassium ion channel activity via direct interaction with a potassium ion channel during G protein-coupled receptor signaling.","definition_xrefs":["PMID:9429760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activator activity","termid":"GO:0099104"},{"relation_name":"is_a","term_name":"ion channel regulator activity involved in G protein-coupled receptor signaling pathway","termid":"GO:0099107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"potassium channel activator activity involved in G protein-coupled receptor signaling pathway","synonyms":[{"name":"potassium channel activator activity involved in G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0099108"}


id: PBO:0069575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 848, pseudogene","termid":"PBO:0069575"}


id: PBO:0076983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 1","termid":"PBO:0076983"}


id: PBO:0051681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibin subunit beta C","termid":"PBO:0051681"}


id: GO:0046565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydroshikimate = 3,4-dihydroxybenzoate + H2O. 3,4-dihydroxybenzoate is also known as protocatechuate.","definition_xrefs":["MetaCyc:DHSHIKIMATE-DEHYDRO-RXN","EC:4.2.1.118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-dehydroshikimate dehydratase activity","secondary_identifiers":["RHEA:24848"],"termid":"GO:0046565"}


id: SO:0002090
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of intronic sequence of the 3' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3_prime_UTR_variant","termid":"SO:0001624"},{"relation_name":"is_a","term_name":"coding_transcript_intron_variant","termid":"SO:0001969"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3_prime_UTR_intron_variant","synonyms":[{"name":"3 prime UTR intron variant","type":"exact"}],"termid":"SO:0002090"}


id: PBO:0053891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1173","termid":"PBO:0053891"}


id: SO:0000542
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one DJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_DJ_C_cluster","synonyms":[{"name":"V DJ C cluster","type":"exact"},{"name":"V-(DJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000542"}


id: PBO:0087028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L13B; not essential for viability; homologous to mammalian ribosomal protein L13, no bacterial homolog; RPL13B has a paralog, RPL13A, that arose from the whole genome duplication","termid":"PBO:0087028"}


id: FYPO:0007466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which methylation of lysine at position 9 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone H3-K9 methylation","synonyms":[{"name":"abnormal histone H3 K9 methylation","type":"exact"},{"name":"abnormal histone H3K9me","type":"exact"},{"name":"abnormal histone lysine H3 K9 methylation","type":"exact"}],"termid":"FYPO:0007466"}


id: GO:0050543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to icosatetraenoic acid, any straight-chain fatty acid with twenty carbon atoms and four double bonds per molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"icosatetraenoic acid binding","synonyms":[{"name":"eicosatetraenoic acid binding","type":"exact"}],"termid":"GO:0050543"}


id: FYPO:0007380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal, and a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"T-shaped vegetative cell","termid":"FYPO:0007379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0005568","FYPO:0000005","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"elongated T-shaped vegetative cell","synonyms":[{"name":"elongated T-shaped cell during vegetative growth","type":"exact"},{"name":"elongated T-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"long T-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0007380"}


id: SO:0000588
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A self spliced intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"ribozymic","termid":"SO:0001186"},{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autocatalytically_spliced_intron","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:autocatalytically_spliced_intron","type":"exact"},{"name":"autocatalytically spliced intron","type":"exact"}],"termid":"SO:0000588"}


id: PBO:0034719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1-CUL4-associated factor (DCAF), Wdr70","termid":"PBO:0034719"}


id: PBO:0059249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L18","termid":"PBO:0059249"}


id: GO:0061465
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the plasma membrane that contributes to the structure of a hemidesmosome.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane part of hemidesmosome (obsolete GO:0061465)","termid":"GO:0061465"}


id: PBO:0080546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 5","termid":"PBO:0080546"}


id: PBO:0111940
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kip2 subfamily","termid":"PBO:0111940"}


id: GO:0051404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of Arg-Xaa bonds.","definition_xrefs":["EC:3.4.22.8"],"gene_count":0,"genotype_count":0,"name":"obsolete clostripain activity (obsolete GO:0051404)","synonyms":[{"name":"Clostridium histolyticum proteinase B","type":"related"},{"name":"alpha-clostridipain","type":"related"},{"name":"clostridiopeptidase B activity","type":"exact"},{"name":"clostripain activity","type":"exact"}],"termid":"GO:0051404"}


id: PATO:0002278
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's participating in a joint with another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in contact with","termid":"PATO:0001961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"articulated with","termid":"PATO:0002278"}


id: FYPO:0005142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of proteasome core complex binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:16096059","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"decreased proteasome core complex binding","synonyms":[{"name":"reduced proteasome core complex binding","type":"exact"}],"termid":"FYPO:0005142"}


id: PBO:0068688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 69, pseudogene","termid":"PBO:0068688"}


id: PBO:0018205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein, involved in endocytosis (predicted)","termid":"PBO:0018205"}


id: PR:Q9UTS5-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein zas1 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UTS5-2.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc finger protein zas1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UTS5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zas1 isoform 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9UTS5-2"],"synonyms":[{"name":"Spom972h-zas1/iso:2","type":"exact"},{"name":"zinc finger protein zas1 isoform zas1A (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTS5-2"}


id: PBO:0035747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_nucleated_from_eMTOC_present_in_decreased_numbers","termid":"PBO:0035747"}


id: PBO:0000659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH/VHS domain protein (predicted)","termid":"PBO:0000659"}


id: GO:1990262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of anti-Mullerian hormone to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Upon ligand binding, the receptor  forms a complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators.","definition_xrefs":["PMID:23624077","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"anti-Mullerian hormone receptor signaling pathway","synonyms":[{"name":"anti-Mullerian hormone signaling pathway","type":"exact"}],"termid":"GO:1990262"}


id: PBO:0054945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2359","termid":"PBO:0054945"}


id: GO:0050902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of loosely bound or rolling leukocytes by signals displayed on blood vessel endothelial cells, which is typically the second step in cellular extravasation.","definition_xrefs":["PMID:8600538","ISBN:0781735149","PMID:14680625","PMID:14708592","PMID:7507411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"},{"relation_name":"part_of","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte adhesive activation","synonyms":[{"name":"leukocyte adhesive triggering","type":"exact"}],"termid":"GO:0050902"}


id: MOD:00810
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-mannosylserine.","definition_xrefs":["RESID:AA0402","PubMed:391559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"},{"relation_name":"is_a","term_name":"mannosylated residue","termid":"MOD:00595"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-mannosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(alpha-D-mannopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Hex)","type":"exact"},{"name":"CARBOHYD O-linked (Man) serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O-mannopyranosylserine","type":"exact"},{"name":"O-mannosyl-L-serine","type":"exact"},{"name":"O3-mannosylserine","type":"exact"},{"name":"OManSer","type":"exact"}],"termid":"MOD:00810"}


id: PBO:0073624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 10","termid":"PBO:0073624"}


id: GO:0015631
data:
  {"annotated_genes":["SJAG_02656","SJAG_02609","SJAG_02270","SJAG_03540","SJAG_02040","SJAG_02336","SJAG_02384","SJAG_00332","SJAG_02814","SJAG_02624","SJAG_01613","SJAG_02795","SJAG_04745","SJAG_01760","SJAG_00042","SJAG_01297","SJAG_02045","SJAG_01546","SJAG_03073","SJAG_02848","SJAG_00773","SJAG_00723","SJAG_04074","SJAG_00851","SJAG_03835","SJAG_00930","SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66327,75718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048487"},{"annotations":[68098,65659,75673,77642,60852,74992,67499,75737,76046,78622,59069,63420,58602,61734,75385,63406,72784,73068,75358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008017"},{"annotations":[70187,70743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051011"},{"annotations":[64774,67631,78776,69540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051010"}]},"cv_name":"molecular_function","definition":"Binding to monomeric or multimeric forms of tubulin, including microtubules.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00332":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01760":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02270":null,"SJAG_02336":null,"SJAG_02384":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02656":null,"SJAG_02795":null,"SJAG_02814":null,"SJAG_02848":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04074":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008092","GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"tubulin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0015631","terms_by_termid":{"GO:0008017":null,"GO:0048487":null,"GO:0051010":null,"GO:0051011":null}}


id: PBO:0043373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 3","termid":"PBO:0043373"}


id: PBO:0034092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_catabolism_of","termid":"PBO:0034092"}


id: GO:0007100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Separation of duplicated centrosome components at the beginning of mitosis. The centriole pair within each centrosome becomes part of a separate microtubule organizing center that nucleates a radial array of microtubules called an aster. The two asters move to opposite sides of the nucleus to form the two poles of the mitotic spindle.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centrosome separation","termid":"GO:0051299"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"mitotic centrosome separation","termid":"GO:0007100"}


id: GO:0045262
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The catalytic sector of the plasma membrane hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the plasma membrane when the entire ATP synthase is assembled. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mah","GOC:mtg_sensu","PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) (obsolete GO:0045262)","synonyms":[{"name":"hydrogen-transporting ATP synthase, F1 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, catalytic core F(1)","type":"broad"}],"termid":"GO:0045262"}


id: PBO:0038941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADH5 pseudogene 5","termid":"PBO:0038941"}


id: PBO:0077665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 11b","termid":"PBO:0077665"}


id: PBO:0036130
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0036130"}


id: FYPO:0003955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular metabolism phenotype observed in the vegetative growth phase of the life cycle in which triglyceride biosynthesis is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased triglyceride biosynthetic process","synonyms":[{"name":"increased TAG biosynthetic process","type":"exact"},{"name":"increased triacylglycerol biosynthesis","type":"exact"},{"name":"increased triacylglycerol biosynthetic process","type":"exact"},{"name":"increased triglyceride biosynthesis","type":"exact"},{"name":"increased triglyceride biosynthetic process during mitotic cell cycle","type":"related"},{"name":"increased triglyceride biosynthetic process during vegetative growth","type":"exact"}],"termid":"FYPO:0003955"}


id: PBO:0076266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex interacting GAS6 enhancer non-coding RNA","termid":"PBO:0076266"}


id: PBO:0091351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial expression network (MIOREX) component Mrx11","termid":"PBO:0091351"}


id: PBO:0055659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3099","termid":"PBO:0055659"}


id: PBO:0043845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPX chromosome region candidate 1","termid":"PBO:0043845"}


id: PR:Q9UTJ3-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic expression up-regulated protein 1/2 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UTJ3-1.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTJ3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic expression up-regulated protein 1/2 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UTJ3"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 1/2 isoform meu1-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9UTJ3-1"],"synonyms":[{"name":"Spom972h-meu1-1/iso:meu1-1","type":"exact"},{"name":"meiotic expression up-regulated protein 1/2 isoform SPAC1556.06.1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 1/2 isoform SPAC1556.06a (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 1/2 isoform meu1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTJ3-1"}


id: PBO:0012243
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains FLEX elelment","termid":"PBO:0012243"}


id: PBO:0073458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein A1","termid":"PBO:0073458"}


id: PBO:0080126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 4","termid":"PBO:0080126"}


id: PBO:0090835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane iron transmembrane transporter Fip1","termid":"PBO:0090835"}


id: MOD:01077
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanedithiol/TFA cyclic adduct","termid":"MOD:01077"}


id: PBO:0077961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 14-2","termid":"PBO:0077961"}


id: FYPO:0002761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule bundle formation, which normally results in a parallel arrangement of microtubules, is abnormal.","definition_xrefs":["GO:0001578","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule bundle formation","synonyms":[{"name":"abnormal microtubule array formation","type":"related"}],"termid":"FYPO:0002761"}


id: SO:0000672
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence that is conserved, although rearranged relative to the micronucleus, in the macronucleus of a ciliate genome.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_rearrangement_feature","termid":"SO:0000669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macronucleus_destined_segment","synonyms":[{"name":"macronucleus destined segment","type":"exact"}],"termid":"SO:0000672"}


id: PBO:0068535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 138, pseudogene","termid":"PBO:0068535"}


id: GO:0098919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynaptic density.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of postsynaptic specialization","termid":"GO:0098879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of postsynaptic density","termid":"GO:0098919"}


id: SO:1000026
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from guanine to cytidine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_to_pyrimidine_transversion","termid":"SO:1000023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G_to_C_transversion","synonyms":[{"name":"G to C transversion","type":"exact"}],"termid":"SO:1000026"}


id: GO:0050180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phloretin = H+ + phloretate + phloroglucinol.","definition_xrefs":["RHEA:23396","EC:3.7.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"phloretin hydrolase activity","secondary_identifiers":["MetaCyc:PHLORETIN-HYDROLASE-RXN","KEGG_REACTION:R02901"],"synonyms":[{"name":"2',4,4',6'-tetrahydroxydehydrochalcone 1,3,5-trihydroxybenzenehydrolase activity","type":"related"},{"name":"lactase-phlorizin hydrolase","type":"broad"}],"termid":"GO:0050180"}


id: PBO:0086055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, secreted when constitutively expressed; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the cell periphery, SWAT-GFP fusion also localizes to the extracellular region, and mCherry fusion also localizes to the vacuole; S/T rich and highly similar to YOL155C, a putative glucan alpha-1,4-glucosidase; transcript is induced in both high and low pH environments; non-essential gene","termid":"PBO:0086055"}


id: PR:Q9Y7U6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rgf1 gene.","definition_xrefs":["UniProtKB:Q9Y7U6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho1 guanine nucleotide exchange factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.07","synonyms":[{"name":"Spom972h-rgf1","type":"exact"}],"termid":"PR:Q9Y7U6"}


id: GO:1904698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of acinar cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:9788538","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of acinar cell proliferation","termid":"GO:1904697"},{"relation_name":"negatively_regulates","term_name":"acinar cell proliferation","termid":"GO:1990863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acinar cell proliferation","synonyms":[{"name":"down regulation of acinar cell proliferation","type":"exact"},{"name":"down regulation of acinic cell proliferation","type":"exact"},{"name":"down regulation of acinous cell proliferation","type":"exact"},{"name":"down-regulation of acinar cell proliferation","type":"exact"},{"name":"down-regulation of acinic cell proliferation","type":"exact"},{"name":"down-regulation of acinous cell proliferation","type":"exact"},{"name":"downregulation of acinar cell proliferation","type":"exact"},{"name":"downregulation of acinic cell proliferation","type":"exact"},{"name":"downregulation of acinous cell proliferation","type":"exact"},{"name":"inhibition of acinar cell proliferation","type":"narrow"},{"name":"inhibition of acinic cell proliferation","type":"narrow"},{"name":"inhibition of acinous cell proliferation","type":"narrow"},{"name":"negative regulation of acinic cell proliferation","type":"exact"},{"name":"negative regulation of acinous cell proliferation","type":"exact"}],"termid":"GO:1904698"}


id: PBO:0060203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin like 1","termid":"PBO:0060203"}


id: GO:1901739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myoblast fusion.","definition_xrefs":["PMID:21364645","GOC:TermGenie","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060142"},{"relation_name":"regulates","term_name":"myoblast fusion","termid":"GO:0007520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myoblast fusion","termid":"GO:1901739"}


id: GO:0003948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-(beta-N-acetyl-D-glucosaminyl)-L-asparagine + H2O = N-acetyl-beta-D-glucosaminylamine + L-aspartate + H+.","definition_xrefs":["EC:3.5.1.26","RHEA:11544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity","secondary_identifiers":["KEGG_REACTION:R03421","MetaCyc:3.5.1.26-RXN"],"synonyms":[{"name":"4-N-(beta-N-acetyl-D-glucosaminyl)-L-asparagine amidohydrolase activity","type":"related"},{"name":"N-aspartyl-beta-glucosaminidase activity","type":"related"},{"name":"N4-(beta-N-acetyl-D-glucosaminyl)-L-asparagine amidohydrolase activity","type":"related"},{"name":"aspartylglucosaminidase activity","type":"related"},{"name":"aspartylglucosylaminase activity","type":"related"},{"name":"aspartylglucosylamine deaspartylase activity","type":"related"},{"name":"aspartylglucosylaminidase activity","type":"related"},{"name":"aspartylglycosylamine amidohydrolase activity","type":"related"},{"name":"beta-aspartylglucosylamine amidohydrolase activity","type":"related"},{"name":"glucosylamidase activity","type":"related"},{"name":"glycosylasparaginase activity","type":"related"}],"termid":"GO:0003948"}


id: PBO:0043767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone COX17","termid":"PBO:0043767"}


id: GO:0098807
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is part of a chloroplast thylakoid membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast thylakoid membrane","termid":"GO:0009535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}


id: GO:0033281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of three proteins integral to the cytoplasmic membrane of bacteria and membranes of organelles derived from bacteria (chloroplasts and mitochondria) involved in membrane transport of folded proteins.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TAT protein transport complex","synonyms":[{"name":"TAT protein secretion complex","type":"narrow"},{"name":"TAT protein translocation system complex","type":"narrow"},{"name":"Twin-arginine translocation complex","type":"narrow"}],"termid":"GO:0033281"}


id: PBO:0085461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted membrane protein required for lumenal ER protein retention; recycles inorganic phosphate byproduct of glycosylation from ER and Golgi; involved in recycling of early Golgi glycosyltransferases from late to early Golgi compartments; mutants secrete the endogenous ER protein, BiP (Kar2p)","termid":"PBO:0085461"}


id: PBO:0066392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor accessory protein 2","termid":"PBO:0066392"}


id: PBO:0063574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PER3 pseudogene 1","termid":"PBO:0063574"}


id: PBO:0043536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 4","termid":"PBO:0043536"}


id: GO:0003278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in heart morphogenesis","synonyms":[{"name":"apoptosis involved in heart morphogenesis","type":"narrow"}],"termid":"GO:0003278"}


id: PBO:0057151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 299","termid":"PBO:0057151"}


id: PBO:0005434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation regulator (predicted)","termid":"PBO:0005434"}


id: GO:0021873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of a neuroblast located in the forebrain. Neuroblast division gives rise to at least another neuroblast.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast division","termid":"GO:0055057"},{"relation_name":"part_of","term_name":"forebrain generation of neurons","termid":"GO:0021872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain neuroblast division","termid":"GO:0021873"}


id: PBO:0059511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded cytochrome b","termid":"PBO:0059511"}


id: PBO:0091926
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wee1 can modulate the probability of entering mitosis at a given cell size","termid":"PBO:0091926"}


id: GO:1901058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-hydroxyphenyl lignin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin metabolic process","termid":"GO:0009808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"p-hydroxyphenyl lignin metabolic process","synonyms":[{"name":"H-lignin metabolic process","type":"exact"},{"name":"p-hydroxyphenyl lignin metabolism","type":"exact"}],"termid":"GO:1901058"}


id: GO:0009869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction between a pollen grain and pistil that results in inhibition of pollen germination/growth.","definition_xrefs":["PMID:10375566"],"gene_count":0,"genotype_count":0,"name":"obsolete incompatible pollen-pistil interaction (obsolete GO:0009869)","synonyms":[{"name":"incompatible pollen-pistil interaction","type":"exact"}],"termid":"GO:0009869"}


id: PBO:0058597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6729","termid":"PBO:0058597"}


id: PBO:0091285
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMtor","termid":"PBO:0091285"}


id: PBO:0005367
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic liver disease","termid":"PBO:0005367"}


id: FYPO:0007238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of two crossovers within a given interval during meiosis I is higher than normal.","definition_xrefs":["PomBase:mah","PMID:30217891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000293","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased meiotic double crossover formation","synonyms":[{"name":"decreased crossover interference","type":"exact"}],"termid":"FYPO:0007238"}


id: GO:0044040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, that involve more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism carbohydrate metabolic process (obsolete GO:0044040)","synonyms":[{"name":"main pathways of carbohydrate metabolic process","type":"narrow"},{"name":"main pathways of carbohydrate metabolism","type":"narrow"},{"name":"multi-organism carbohydrate metabolism","type":"exact"}],"termid":"GO:0044040"}


id: PBO:0047671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filaggrin","termid":"PBO:0047671"}


id: GO:0021947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deep nuclear neuron from their ventrolateral origin to a rostrodorsal region of the cerebellar plate.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:jid","GOC:cls","PMID:15157725","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"},{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"},{"relation_name":"part_of","term_name":"deep nuclear neuron cell migration","termid":"GO:0021946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outward migration of deep nuclear neurons","termid":"GO:0021947"}


id: GO:0032508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating a region of unpaired single strands.","definition_xrefs":["GOC:mah","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA geometric change","termid":"GO:0032392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DNA duplex unwinding","synonyms":[{"name":"DNA unwinding","type":"exact"},{"name":"duplex DNA melting","type":"exact"}],"termid":"GO:0032508"}


id: PBO:0000357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine-phosphate mutase (predicted)","termid":"PBO:0000357"}


id: PBO:0088181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc cluster protein proposed to be a transcriptional regulator; regulator involved in the stress response; regulates utilization of fatty acids and accumulation of lipids","termid":"PBO:0088181"}


id: GO:1990814
data:
  {"annotated_genes":["SJAG_03780","SJAG_03682","SJAG_00871","SJAG_03832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99278,108623,109486,112002],"is_not":false,"summary":null,"term":"GO:1990814"}]},"cv_name":"molecular_function","definition":"An activity that facilitates the formation of a complementary double-stranded DNA molecule.","definition_xrefs":["PMID:25520186","PMID:22888405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded DNA binding","termid":"GO:0003697"},{"relation_name":"is_a","term_name":"annealing activity","termid":"GO:0140666"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_03682":null,"SJAG_03780":null,"SJAG_03832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"DNA/DNA annealing activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA reannealing activity","type":"exact"}],"termid":"GO:1990814","terms_by_termid":{"GO:1990814":null}}


id: SO:0000552
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region in the 5' UTR that pairs with the 16S rRNA during formation of the preinitiation complex.","definition_xrefs":["SO:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome_entry_site","termid":"SO:0000139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shine_Dalgarno_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Shine-Dalgarno_sequence"],"synonyms":[{"name":"RBS","type":"related"},{"name":"Shine Dalgarno sequence","type":"exact"},{"name":"Shine-Dalgarno sequence","type":"exact"},{"name":"five prime ribosome binding site","type":"exact"}],"termid":"SO:0000552"}


id: GO:0022602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the sexual cycle seen in females, often with physiologic changes in the endometrium that recur at regular intervals during the reproductive years.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"rhythmic process","termid":"GO:0048511"},{"relation_name":"part_of","term_name":"ovulation cycle","termid":"GO:0042698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovulation cycle process","synonyms":[{"name":"estrous cycle process","type":"related"},{"name":"menstrual cycle process","type":"related"}],"termid":"GO:0022602"}


id: GO:0016035
data:
  {"annotated_genes":["SJAG_00153","SJAG_00611"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95403,98976],"is_not":false,"summary":null,"term":"GO:0016035"}]},"cv_name":"cellular_component","definition":"A heterodimeric DNA polymerase complex that catalyzes error-prone DNA synthesis in contexts such as translesion synthesis and double-stranded break repair. First characterized in Saccharomyces, in which the subunits are Rev3p and Rev7p; a third protein, Rev1p, is often associated with the polymerase dimer.","definition_xrefs":["PMID:16971464","PMID:16631579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase complex","termid":"GO:0042575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"zeta DNA polymerase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016035","terms_by_termid":{"GO:0016035":null}}


id: FYPO:0000129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is formed in the shape of a sphere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"spherical cell","termid":"FYPO:0001956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spherical vegetative cell","synonyms":[{"name":"orb during vegetative growth","type":"exact"},{"name":"spherical cells during vegetative growth","type":"exact"},{"name":"spherical vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000129"}


id: FYECO:0000092
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Na ions","synonyms":[{"name":"sodium ions added","type":"exact"}],"termid":"FYECO:0000092"}


id: PBO:0076984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 2","termid":"PBO:0076984"}


id: PBO:0069974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1269, pseudogene","termid":"PBO:0069974"}


id: PBO:0002841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkyltransferase-like protein Atl1","termid":"PBO:0002841"}


id: GO:1903671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sprouting angiogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16756958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of angiogenesis","termid":"GO:0016525"},{"relation_name":"is_a","term_name":"regulation of sprouting angiogenesis","termid":"GO:1903670"},{"relation_name":"negatively_regulates","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sprouting angiogenesis","synonyms":[{"name":"down regulation of sprouting angiogenesis","type":"exact"},{"name":"down-regulation of sprouting angiogenesis","type":"exact"},{"name":"downregulation of sprouting angiogenesis","type":"exact"},{"name":"inhibition of sprouting angiogenesis","type":"narrow"}],"termid":"GO:1903671"}


id: PBO:0081881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 829","termid":"PBO:0081881"}


id: GO:0071399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a linoleic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to linoleic acid","termid":"GO:0070543"},{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to linoleic acid","synonyms":[{"name":"cellular response to linoleate","type":"exact"}],"termid":"GO:0071399"}


id: FYPO:0002463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, septated, elongated, and is curved along the long axis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable curved septated vegetative cell","termid":"FYPO:0002282"},{"relation_name":"is_a","term_name":"inviable curved elongated vegetative cell","termid":"FYPO:0002411"},{"relation_name":"is_a","term_name":"inviable branched, elongated vegetative cell","termid":"FYPO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable branched, curved, elongated vegetative cell","secondary_identifiers":["FYPO:0002481"],"synonyms":[{"name":"inviable branched curved cell","type":"exact"},{"name":"inviable branched, curved cell during vegetative growth","type":"exact"},{"name":"inviable branched, curved septated cell","type":"exact"},{"name":"inviable branched, curved vegetative cell","type":"exact"},{"name":"inviable branched, curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, curved, elongated cell during vegetative growth","type":"exact"},{"name":"inviable branched, curved, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated, curved septated cell","type":"exact"},{"name":"inviable branched, long, curved, septated cell","type":"exact"},{"name":"inviable curved branched cell","type":"exact"},{"name":"inviable curved branched elongated cell","type":"exact"},{"name":"inviable elongated branched curved cell","type":"exact"},{"name":"lethal; branched, curved, elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002463"}


id: PBO:0067811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 113","termid":"PBO:0067811"}


id: FYPO:0003248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured at centromere inner repeat regions is higher than normal.","definition_xrefs":["PMID:22291963","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased level of histone H3 at centromere inner repeat","synonyms":[{"name":"increased level of histone H3 at centromere imr","type":"exact"},{"name":"increased level of histone H3 at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased level of histone H3 at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003248"}


id: PBO:0068673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 54, pseudogene","termid":"PBO:0068673"}


id: GO:0035736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to compound eye morphogenesis.","definition_xrefs":["GOC:sart","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in compound eye morphogenesis","termid":"GO:0035736"}


id: FYPO:0005005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more hexose transport RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Hexose transport RNAs are transcribed from genes whose products are involved in transport of six-carbon sugars.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased level of hexose transport gene mRNA during vegetative growth","synonyms":[{"name":"increased hexose transport gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of hexose transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of hexose transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of hexose transport gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005005"}


id: GO:1905181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of urease activity.","definition_xrefs":["GO_REF:0000059","PMID:16244137","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of urease activity","synonyms":[{"name":"regulation of urea amidohydrolase activity","type":"exact"}],"termid":"GO:1905181"}


id: GO:0044064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host respiratory system process (obsolete GO:0044064)","synonyms":[{"name":"regulation by symbiont of host respiratory system process","type":"exact"}],"termid":"GO:0044064"}


id: PBO:0072721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribitol xylosyltransferase 1","termid":"PBO:0072721"}


id: PBO:0068250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N2","termid":"PBO:0068250"}


id: GO:2000938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellotriose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of cellotriose metabolic process","termid":"GO:2000935"},{"relation_name":"is_a","term_name":"regulation of cellotriose catabolic process","termid":"GO:2000936"},{"relation_name":"positively_regulates","term_name":"cellotriose catabolic process","termid":"GO:2000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellotriose catabolic process","synonyms":[{"name":"positive regulation of cellotriose catabolism","type":"exact"}],"termid":"GO:2000938"}


id: PATO:0002464
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of some aspect of the bearer extending past the position of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extends beyond","termid":"PATO:0002464"}


id: GO:1900715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of violaceol I biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of violaceol I biosynthetic process","termid":"GO:1900713"},{"relation_name":"positively_regulates","term_name":"violaceol I biosynthetic process","termid":"GO:1900590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of violaceol I biosynthetic process","synonyms":[{"name":"activation of violaceol I anabolism","type":"exact"},{"name":"activation of violaceol I biosynthesis","type":"exact"},{"name":"activation of violaceol I biosynthetic process","type":"narrow"},{"name":"activation of violaceol I formation","type":"exact"},{"name":"activation of violaceol I synthesis","type":"exact"},{"name":"positive regulation of violaceol I anabolism","type":"exact"},{"name":"positive regulation of violaceol I biosynthesis","type":"exact"},{"name":"positive regulation of violaceol I formation","type":"exact"},{"name":"positive regulation of violaceol I synthesis","type":"exact"},{"name":"up regulation of violaceol I anabolism","type":"exact"},{"name":"up regulation of violaceol I biosynthesis","type":"exact"},{"name":"up regulation of violaceol I biosynthetic process","type":"exact"},{"name":"up regulation of violaceol I formation","type":"exact"},{"name":"up regulation of violaceol I synthesis","type":"exact"},{"name":"up-regulation of violaceol I anabolism","type":"exact"},{"name":"up-regulation of violaceol I biosynthesis","type":"exact"},{"name":"up-regulation of violaceol I biosynthetic process","type":"exact"},{"name":"up-regulation of violaceol I formation","type":"exact"},{"name":"up-regulation of violaceol I synthesis","type":"exact"},{"name":"upregulation of violaceol I anabolism","type":"exact"},{"name":"upregulation of violaceol I biosynthesis","type":"exact"},{"name":"upregulation of violaceol I biosynthetic process","type":"exact"},{"name":"upregulation of violaceol I formation","type":"exact"},{"name":"upregulation of violaceol I synthesis","type":"exact"}],"termid":"GO:1900715"}


id: PBO:0076463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking regulator and scaffold protein tamalin","termid":"PBO:0076463"}


id: PBO:0041709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 4","termid":"PBO:0041709"}


id: GO:0120193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a tight junction. A tight junction seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other.","definition_xrefs":["GOC:rl","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tight junction organization","synonyms":[{"name":"occluding cell junction organization","type":"exact"},{"name":"occluding junction organization","type":"exact"}],"termid":"GO:0120193"}


id: PBO:0091107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine biosynthesis protein Tyw3","termid":"PBO:0091107"}


id: FYPO:0000508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of nuclear export is decreased. Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"abnormal nuclear export","termid":"FYPO:0000506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased nuclear export","synonyms":[{"name":"decreased nuclear export during mitotic cell cycle","type":"related"},{"name":"decreased nuclear export during vegetative growth","type":"exact"},{"name":"nuclear export: decreased","type":"related"},{"name":"reduced nuclear export","type":"exact"}],"termid":"FYPO:0000508"}


id: PBO:0052010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JNK1/MAPK8-associated membrane protein pseudogene 1","termid":"PBO:0052010"}


id: MOD:01092
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesitylene-2-sulfonyl","synonyms":[{"name":"Mts","type":"exact"}],"termid":"MOD:01092"}


id: PBO:0048022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor substrate 3","termid":"PBO:0048022"}


id: PBO:0050290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocyte nuclear factor 4 alpha","termid":"PBO:0050290"}


id: PBO:0080443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrae development associated","termid":"PBO:0080443"}


id: PR:P28748
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding nuclear protein spi1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:18422602","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding nuclear protein spi1","termid":"PR:000027715"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.03c","secondary_identifiers":["PR:000027716","UniProtKB:P28748"],"synonyms":[{"name":"SPBC1289.03C","type":"related"},{"name":"Spom972h-spi1","type":"exact"}],"termid":"PR:P28748"}


id: PBO:0071776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 4","termid":"PBO:0071776"}


id: MOD:00601
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively produces an heterocyclic amino acid with a covalent bond between the side chain and either its alpha amino or 1-carboxyl group, possibly breaking the peptide chain.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclized residue","synonyms":[{"name":"CycRes","type":"exact"}],"termid":"MOD:00601"}


id: PATO:0000979
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000979 porosity value (obsolete PATO:0000979)","termid":"PATO:0000979"}


id: GO:1900782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving fumiquinazoline F.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline F metabolic process (obsolete GO:1900782)","synonyms":[{"name":"fumiquinazoline F metabolism","type":"exact"}],"termid":"GO:1900782"}


id: FYPO:0003606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of prophase of the first meiotic nuclear division is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"},{"relation_name":"is_a","term_name":"decreased duration of meiotic cell cycle phase","termid":"FYPO:0006851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of meiotic prophase I","synonyms":[{"name":"reduced duration of meiotic prophase I","type":"exact"},{"name":"short meiotic prophase I","type":"exact"}],"termid":"FYPO:0003606"}


id: PR:O14238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01147","PANTHER:PTHR10705:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit ost2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.05","secondary_identifiers":["UniProtKB:O14238"],"synonyms":[{"name":"Spom972h-DAD1","type":"exact"},{"name":"oligosaccharyl transferase 16 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14238"}


id: PATO:0001136
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001136 ig e concentration (obsolete PATO:0001136)","termid":"PATO:0001136"}


id: PBO:0080678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"whirlin","termid":"PBO:0080678"}


id: PBO:0087998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T subunit of the mitochondrial glycine decarboxylase complex; glycine decarboxylase is required for the catabolism of glycine to 5,10-methylene-THF; expression is regulated by levels of levels of 5,10-methylene-THF in the cytoplasm","termid":"PBO:0087998"}


id: GO:1901249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lung goblet cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"lung goblet cell differentiation","termid":"GO:0060480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lung goblet cell differentiation","synonyms":[{"name":"regulation of pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:1901249"}


id: GO:0045804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of eclosion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eclosion","termid":"GO:0007563"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"eclosion","termid":"GO:0007562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eclosion","synonyms":[{"name":"down regulation of eclosion","type":"exact"},{"name":"down-regulation of eclosion","type":"exact"},{"name":"downregulation of eclosion","type":"exact"},{"name":"inhibition of eclosion","type":"narrow"}],"termid":"GO:0045804"}


id: PBO:0060419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylated alpha-linked acidic dipeptidase 2","termid":"PBO:0060419"}


id: PBO:0053423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 365","termid":"PBO:0053423"}


id: PBO:0052426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KISS1 receptor","termid":"PBO:0052426"}


id: GO:0030460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of MAPK (mating sensu Fungi) (obsolete GO:0030460)","synonyms":[{"name":"nuclear translocation of MAPK (mating sensu Fungi)","type":"exact"}],"termid":"GO:0030460"}


id: PBO:0062280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily I member 1","termid":"PBO:0062280"}


id: GO:0034494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the microneme membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"microneme","termid":"GO:0020009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microneme lumen","termid":"GO:0034494"}


id: GO:0071484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light intensity stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"},{"relation_name":"is_a","term_name":"cellular response to light stimulus","termid":"GO:0071482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to light intensity","termid":"GO:0071484"}


id: PBO:0004834
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypermethioninemia","termid":"PBO:0004834"}


id: PBO:0072603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L1 domain containing 1","termid":"PBO:0072603"}


id: PBO:0051686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inka box actin regulator 2","termid":"PBO:0051686"}


id: PBO:0081403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 251","termid":"PBO:0081403"}


id: GO:0032637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-8 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-8 production","secondary_identifiers":["GO:0042228","GO:0072606"],"synonyms":[{"name":"IL-8 production","type":"exact"},{"name":"interleukin-8 biosynthetic process","type":"narrow"},{"name":"interleukin-8 secretion","type":"narrow"}],"termid":"GO:0032637"}


id: FYPO:0002137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of an RNA catabolic process is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"},{"relation_name":"is_a","term_name":"decreased RNA catabolic process","termid":"FYPO:0003552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA catabolic process during vegetative growth","synonyms":[{"name":"decreased RNA breakdown during vegetative growth","type":"exact"},{"name":"decreased RNA catabolic process during mitotic cell cycle","type":"related"},{"name":"decreased RNA catabolism during vegetative growth","type":"exact"},{"name":"decreased RNA degradation during vegetative growth","type":"exact"},{"name":"reduced RNA catabolic process during vegetative growth","type":"exact"}],"termid":"FYPO:0002137"}


id: PBO:0041411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C7","termid":"PBO:0041411"}


id: _global:interaction_genotype_a
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_genotype_a","termid":"_global:interaction_genotype_a"}


id: FYPO:0002808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 6,7-dimethyl-8-ribityllumazine synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal 6,7-dimethyl-8-ribityllumazine synthase activity","termid":"FYPO:0002808"}


id: GO:0031816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y6 nucleotide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"P2Y6 nucleotide receptor binding","synonyms":[{"name":"P2Y6 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031816"}


id: PBO:0074234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 47 member 2","termid":"PBO:0074234"}


id: GO:0039658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing TBK1 (TANK-binding kinase 1), IKBKE (I-Kappa-B kinase epsilon/IKKE/IKK-epsilon) and the DEAD box family RNA helicase DDX3.","definition_xrefs":["VZ:719","PMID:18636090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TBK1-IKKE-DDX3 complex","synonyms":[{"name":"TBK1-IKBKE-DDX3 complex","type":"exact"}],"termid":"GO:0039658"}


id: GO:1903740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["GO_REF:0000059","PMID:25359770","GOC:rn","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphatase activity","termid":"GO:0010922"},{"relation_name":"is_a","term_name":"regulation of phosphatidate phosphatase activity","termid":"GO:1903730"},{"relation_name":"part_of","term_name":"positive regulation of triglyceride biosynthetic process","termid":"GO:0010867"},{"relation_name":"part_of","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidate phosphatase activity","synonyms":[{"name":"activation of 3-sn-phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of acid phosphatidyl phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidate phosphatase activity","type":"narrow"},{"name":"activation of phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidic acid phosphatase activity","type":"narrow"},{"name":"positive regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up-regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"upregulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphatase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903740"}


id: PBO:0110033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSP90AB1 associated lncRNA 1","termid":"PBO:0110033"}


id: GO:0051147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle cell differentiation.","definition_xrefs":["CL:0000187","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle cell differentiation","termid":"GO:0051147"}


id: PBO:0062216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AM member 1 pseudogene","termid":"PBO:0062216"}


id: GO:0061148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix of the endocardium. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"},{"relation_name":"part_of","term_name":"endocardium development","termid":"GO:0003157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extracellular matrix organization involved in endocardium development","synonyms":[{"name":"extracellular matrix organisation involved in endocardium development","type":"exact"}],"termid":"GO:0061148"}


id: PBO:0040335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MC2 pseudogene 1","termid":"PBO:0040335"}


id: GO:0005979
data:
  {"annotated_genes":["SJAG_00963","SJAG_01376"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77736,87039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucan biosynthetic process","termid":"GO:0010962"},{"relation_name":"is_a","term_name":"regulation of glycogen metabolic process","termid":"GO:0070873"},{"relation_name":"regulates","term_name":"glycogen biosynthetic process","termid":"GO:0005978"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00963":null,"SJAG_01376":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"regulation of glycogen biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of glycogen anabolism","type":"exact"},{"name":"regulation of glycogen biosynthesis","type":"exact"},{"name":"regulation of glycogen formation","type":"exact"},{"name":"regulation of glycogen synthesis","type":"exact"}],"termid":"GO:0005979","terms_by_termid":{"GO:0045719":null}}


id: PBO:0062628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 5 pseudogene","termid":"PBO:0062628"}


id: PBO:0029181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_level_during_heat_shock","termid":"PBO:0029181"}


id: PR:Q9UUF4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17A3.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"altered inheritance of mitochondria protein 19 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.02","synonyms":[{"name":"Spom972h-SPBC17A3.02","type":"exact"}],"termid":"PR:Q9UUF4"}


id: PBO:0067960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 262","termid":"PBO:0067960"}


id: PATO:0000034
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000034 protein concentration (obsolete PATO:0000034)","termid":"PATO:0000034"}


id: PBO:0051327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-18 (pseudogene)","termid":"PBO:0051327"}


id: GO:0050747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of lipoprotein metabolic process","termid":"GO:0050746"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipoprotein metabolic process","synonyms":[{"name":"activation of lipoprotein metabolic process","type":"narrow"},{"name":"positive regulation of lipoprotein metabolism","type":"exact"},{"name":"stimulation of lipoprotein metabolic process","type":"narrow"},{"name":"up regulation of lipoprotein metabolic process","type":"exact"},{"name":"up-regulation of lipoprotein metabolic process","type":"exact"},{"name":"upregulation of lipoprotein metabolic process","type":"exact"}],"termid":"GO:0050747"}


id: GO:0038162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by erythropoietin (EPO) binding to the erythropoietin receptor (EPO-R) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","PMID:12489509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to erythropoietin","termid":"GO:0036018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"erythropoietin-mediated signaling pathway","synonyms":[{"name":"EPO-R signaling pathway","type":"exact"},{"name":"erythropoietin receptor signaling pathway","type":"exact"}],"termid":"GO:0038162"}


id: PBO:0051523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor accessory protein like 1","termid":"PBO:0051523"}


id: PBO:0070112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 26 pseudogene","termid":"PBO:0070112"}


id: PBO:0108621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 pseudogene 4","termid":"PBO:0108621"}


id: PBO:0050852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ICAM4 antisense RNA 1","termid":"PBO:0050852"}


id: PBO:0048487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSAML antisense RNA 1","termid":"PBO:0048487"}


id: PBO:0083545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps two other dubious ORFs: YPR170C and YPR170W-B","termid":"PBO:0083545"}


id: PBO:0068265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 2","termid":"PBO:0068265"}


id: PBO:0049759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"host cell factor C1 regulator 1","termid":"PBO:0049759"}


id: GO:0033982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydro-L-gulonate 6-phosphate + H+ = L-xylulose 5-phosphate + CO2.","definition_xrefs":["EC:4.1.1.85","RHEA:14353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"3-dehydro-L-gulonate-6-phosphate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R07125","MetaCyc:RXN0-705"],"synonyms":[{"name":"3-dehydro-L-gulonate-6-phosphate carboxy-lyase (L-xylulose-5-phosphate-forming) activity","type":"related"},{"name":"3-dehydro-L-gulonate-6-phosphate carboxy-lyase activity","type":"related"},{"name":"3-keto-L-gulonate 6-phosphate decarboxylase activity","type":"related"},{"name":"KGPDC","type":"related"},{"name":"SgaH","type":"related"},{"name":"SgbH","type":"related"},{"name":"UlaD","type":"related"}],"termid":"GO:0033982"}


id: PBO:0031034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_organization","termid":"PBO:0031034"}


id: PR:Q09802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cum1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0654 protein C22G7.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.11c","synonyms":[{"name":"Spom972h-cum1","type":"exact"}],"termid":"PR:Q09802"}


id: GO:2000293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of defecation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of defecation","termid":"GO:2000292"},{"relation_name":"negatively_regulates","term_name":"defecation","termid":"GO:0030421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of defecation","termid":"GO:2000293"}


id: GO:0106047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of acetylpolyamine by the removal of acetyl groups.","definition_xrefs":["PMID:28516954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"},{"relation_name":"is_a","term_name":"macromolecule deacylation","termid":"GO:0098732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyamine deacetylation","termid":"GO:0106047"}


id: GO:1903464
data:
  {"annotated_genes":["SJAG_04623","SJAG_02162","SJAG_01068","SJAG_01210","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104982,112938],"is_not":false,"summary":null,"term":"GO:1903464"},{"annotations":[93881,104983,85483,98472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mtg_cell_cycle","PMID:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"is_a","term_name":"negative regulation of nuclear cell cycle DNA replication","termid":"GO:1902576"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle DNA replication","termid":"GO:1903463"},{"relation_name":"negatively_regulates","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01068":null,"SJAG_01210":null,"SJAG_02162":null,"SJAG_03048":null,"SJAG_04623":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"negative regulation of mitotic cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"down regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of mitotic cell cycle DNA replication","type":"exact"},{"name":"down regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"down regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"down-regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"down-regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of mitotic cell cycle DNA replication","type":"exact"},{"name":"down-regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"down-regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"downregulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"downregulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of mitotic cell cycle DNA replication","type":"exact"},{"name":"downregulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"downregulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"inhibition of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"inhibition of DNA replication involved in S phase involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of DNA replication involved in S-phase involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of mitotic cell cycle DNA replication","type":"narrow"},{"name":"inhibition of mitotic nuclear cell cycle DNA replication","type":"narrow"},{"name":"inhibition of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"negative regulation of DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"negative regulation of DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"negative regulation of nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903464","terms_by_termid":{"GO:1903464":null,"GO:1903467":null}}


id: PBO:0089728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall beta-glucosidase Psu2","termid":"PBO:0089728"}


id: FYPO:0003746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in heterochromatin islands occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at heterochromatin island during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9me at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0003746"}


id: PBO:0027130
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_nitrogen_starvation_gene_mRNA_during_meiotic_cell_cycle","termid":"PBO:0027130"}


id: PBO:0071626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 45","termid":"PBO:0071626"}


id: GO:1903971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to macrophage colony-stimulating factor.","definition_xrefs":["GOC:BHF","GOC:nc","GOC:TermGenie","PMID:19100238","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to cytokine stimulus","termid":"GO:0060760"},{"relation_name":"is_a","term_name":"regulation of response to macrophage colony-stimulating factor","termid":"GO:1903969"},{"relation_name":"positively_regulates","term_name":"response to macrophage colony-stimulating factor","termid":"GO:0036005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to macrophage colony-stimulating factor","synonyms":[{"name":"activation of response to M-CSF","type":"narrow"},{"name":"activation of response to macrophage colony-stimulating factor","type":"narrow"},{"name":"activation of response to macrophage colony-stimulating factor stimulus","type":"narrow"},{"name":"positive regulation of response to M-CSF","type":"exact"},{"name":"positive regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"up regulation of response to M-CSF","type":"exact"},{"name":"up regulation of response to macrophage colony-stimulating factor","type":"exact"},{"name":"up regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"up-regulation of response to M-CSF","type":"exact"},{"name":"up-regulation of response to macrophage colony-stimulating factor","type":"exact"},{"name":"up-regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"upregulation of response to M-CSF","type":"exact"},{"name":"upregulation of response to macrophage colony-stimulating factor","type":"exact"},{"name":"upregulation of response to macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:1903971"}


id: PBO:0062890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovo like zinc finger 2","termid":"PBO:0062890"}


id: PBO:0047130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 170 member B","termid":"PBO:0047130"}


id: PBO:0108509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein Sym1, implicated in pyrimidine or lysine metabolism","termid":"PBO:0108509"}


id: SO:0001691
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme recognition site that, when cleaved, results in no overhangs.","definition_xrefs":["SO:ke","SBOL:jgquinn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_recognition_site","termid":"SO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blunt_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"blunt end restriction enzyme cleavage site","type":"exact"}],"termid":"SO:0001691"}


id: PBO:0072388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 14","termid":"PBO:0072388"}


id: GO:0050950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of late stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of melanocyte differentiation","termid":"GO:0045636"},{"relation_name":"is_a","term_name":"regulation of late stripe melanocyte differentiation","termid":"GO:0050940"},{"relation_name":"positively_regulates","term_name":"late stripe melanocyte differentiation","termid":"GO:0050934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of late stripe melanocyte differentiation","synonyms":[{"name":"activation of late stripe melanocyte differentiation","type":"narrow"},{"name":"positive regulation of late stripe melanophore differentiation","type":"exact"},{"name":"stimulation of late stripe melanocyte differentiation","type":"narrow"},{"name":"up regulation of late stripe melanocyte differentiation","type":"exact"},{"name":"up-regulation of late stripe melanocyte differentiation","type":"exact"},{"name":"upregulation of late stripe melanocyte differentiation","type":"exact"}],"termid":"GO:0050950"}


id: PBO:0091141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase accessory subunit Qtrtd1/Qtr2","termid":"PBO:0091141"}


id: GO:0035657
data:
  {"annotated_genes":["SJAG_04890","SJAG_03949"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92320,92584],"is_not":false,"summary":null,"term":"GO:0035657"}]},"cv_name":"cellular_component","definition":"A protein complex required for the methylation of a glutamine (Gln) residue in the protein release factor eRF1. In S. cerevisiae, this complex consists of at least Trm112p and Mtq2p.","definition_xrefs":["PMID:20400505","PMID:17008308","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03949":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"eRF1 methyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eRF1 MTase complex","type":"exact"}],"termid":"GO:0035657","terms_by_termid":{"GO:0035657":null}}


id: PBO:0048423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl-tRNA amidotransferase subunit B","termid":"PBO:0048423"}


id: GO:0043895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of part of a 1,4-alpha-D-glucan chain by formation of a 1,4-alpha-D-glucosidic bond.","definition_xrefs":["EC:2.4.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"cyclomaltodextrin glucanotransferase activity","secondary_identifiers":["MetaCyc:2.4.1.19-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan 4-alpha-D-(1,4-alpha-D-glucano)-transferase (cyclizing)","type":"exact"},{"name":"BMA","type":"related"},{"name":"Bacillus macerans amylase","type":"related"},{"name":"CGTase","type":"related"},{"name":"alpha-1,4-glucan 4-glycosyltransferase, cyclizing","type":"related"},{"name":"alpha-cyclodextrin glucanotransferase","type":"related"},{"name":"alpha-cyclodextrin glycosyltransferase","type":"related"},{"name":"beta-cyclodextrin glucanotransferase","type":"related"},{"name":"beta-cyclodextrin glycosyltransferase","type":"related"},{"name":"cyclodextrin glucanotransferase","type":"broad"},{"name":"cyclodextrin glycosyltransferase","type":"related"},{"name":"cyclomaltodextrin glucotransferase","type":"related"},{"name":"cyclomaltodextrin glycosyltransferase","type":"related"},{"name":"gamma-cyclodextrin glycosyltransferase","type":"related"},{"name":"konchizaimu","type":"related"},{"name":"neutral-cyclodextrin glycosyltransferase","type":"related"}],"termid":"GO:0043895"}


id: GO:0022628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The large subunit of a ribosome contained within a chloroplast.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid large ribosomal subunit","termid":"GO:0000311"},{"relation_name":"part_of","term_name":"chloroplast ribosome","termid":"GO:0043253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"chloroplast large ribosomal subunit","synonyms":[{"name":"chloroplast ribosomal LSU complex","type":"exact"},{"name":"chloroplast ribosomal large subunit complex","type":"exact"}],"termid":"GO:0022628"}


id: PBO:0055797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a) like 1","termid":"PBO:0055797"}


id: PBO:0060084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 31","termid":"PBO:0060084"}


id: PBO:0048554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine--fructose-6-phosphate transaminase 1","termid":"PBO:0048554"}


id: FYPO:0005122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA transcribed from middle meiotic genes measured in a cell is lower than normal during the meiotic cell cycle. Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:17927811","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of middle meiotic gene mRNA during meiotic cell cycle","synonyms":[{"name":"decreased level of middle meiosis gene mRNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of middle meiotic gene RNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of middle meiotic gene transcripts during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005122"}


id: GO:0030119
data:
  {"annotated_genes":["SJAG_03726","SJAG_02453","SJAG_04565","SJAG_00108","SJAG_04609","SJAG_04931","SJAG_00379","SJAG_01167","SJAG_00800","SJAG_00104","SJAG_02805","SJAG_01809"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97225,108874,109092,114935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030121"},{"annotations":[107739,107680,92369,104423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030122"},{"annotations":[85031,107579,92234,90287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030123"},{"annotations":[107582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030131"}]},"cv_name":"cellular_component","definition":"Any of several heterotetrameric complexes that link clathrin (or another coat-forming molecule, as hypothesized for AP-3 and AP-4) to a membrane surface; they are found on coated pits and coated vesicles, and mediate sorting of cargo proteins into vesicles. Each AP complex contains two large (a beta and one of either an alpha, gamma, delta, or epsilon) subunits (110-130 kDa), a medium (mu) subunit (approximately 50 kDa), and a small (sigma) subunit (15-20 kDa).","definition_xrefs":["GOC:mah","PMID:15473838","PMID:10611976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"membrane coat","termid":"GO:0030117"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02453":null,"SJAG_02805":null,"SJAG_03726":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"AP-type membrane coat adaptor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"clathrin adaptor","type":"related"}],"termid":"GO:0030119","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030123":null,"GO:0030131":null}}


id: PBO:0042899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H related 3","termid":"PBO:0042899"}


id: PBO:0059314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L53 pseudogene 1","termid":"PBO:0059314"}


id: PBO:0028520
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K14_acetylation","termid":"PBO:0028520"}


id: PBO:0030538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cAMP_level_during_glucose_starvation","termid":"PBO:0030538"}


id: RO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"during_which_starts","termid":"RO:0002088"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encompasses","termid":"RO:0002085"}


id: GO:0180015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nucleoside from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:21998139","PMID:30658162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"nucleoside transmembrane transport","termid":"GO:1901642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"nucleoside import across plasma membrane","termid":"GO:0180015"}


id: GO:0043090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of amino acids into a cell or organelle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"amino acid import","synonyms":[{"name":"amino acid uptake","type":"exact"}],"termid":"GO:0043090"}


id: PR:P78854
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- plb1 gene.","definition_xrefs":["UniProtKB:P78854","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.04c","synonyms":[{"name":"Spom972h-plb1","type":"exact"},{"name":"phospholipase B 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78854"}


id: PBO:0061220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 11","termid":"PBO:0061220"}


id: GO:0034451
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small (70-100 nm) cytoplasmic granule that contains a number of centrosomal proteins; centriolar satellites traffic toward microtubule minus ends and are enriched near the centrosome.","definition_xrefs":["PMID:10579718","PMID:12403812","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"centrosome","termid":"GO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"centriolar satellite","termid":"GO:0034451"}


id: GO:0014702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the sarcoplasmic reticulum membrane that contains calcium pumps and is devoted to calcium uptake. The free sarcoplasmic reticulum membrane consists of the longitudinal sarcoplasmic reticulum membrane and the non-junctional region of the terminal cisterna membrane.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"free sarcoplasmic reticulum membrane","termid":"GO:0014702"}


id: PBO:0002516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-isopropylmalate dehydratase Leu2 (predicted)","termid":"PBO:0002516"}


id: PBO:0001385
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response pathway signalling (SRP), mediated phosphorylation of Ser402 ensures efficient reinitiation of tip growth and cell division during recovery from particular stress","termid":"PBO:0001385"}


id: SO:0002192
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat lying outside the sequence for which it has functional significance (eg. transposon insertion target sites).","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flanking_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:flanking","type":"exact"},{"name":"flanking repeat","type":"exact"}],"termid":"SO:0002192"}


id: GO:1900806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of ergot alkaloid.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete ergot alkaloid catabolic process (obsolete GO:1900806)","synonyms":[{"name":"ergot alkaloid degradation","type":"exact"},{"name":"ergot alkaloids breakdown","type":"related"},{"name":"ergot alkaloid breakdown","type":"exact"},{"name":"ergot alkaloid catabolism","type":"exact"},{"name":"ergot alkaloids catabolic process","type":"related"},{"name":"ergot alkaloids catabolism","type":"related"},{"name":"ergot alkaloids degradation","type":"related"}],"termid":"GO:1900806"}


id: GO:0060981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the formation of new blood vessels in the heart from pre-existing blood vessels.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"angiogenesis involved in coronary vascular morphogenesis","termid":"GO:0060978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in coronary angiogenesis","termid":"GO:0060981"}


id: GO:0003348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac endothelial cell.","definition_xrefs":["PMID:18722343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"is_a","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac endothelial cell differentiation","termid":"GO:0003348"}


id: SO:0001170
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of DNA transposon that populates the genomes of protists, fungi, and animals, characterized by a unique set of proteins necessary for their transposition, including a protein-primed DNA polymerase B, retroviral integrase, cysteine protease, and ATPase. Polintons are characterized by 6-bp target site duplications, terminal-inverted repeats that are several hundred nucleotides long, and 5'-AG and TC-3' termini. Polintons exist as autonomous and nonautonomous elements.","definition_xrefs":["PMID:16537396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polinton","synonyms":[{"name":"maverick element","type":"related"}],"termid":"SO:0001170"}


id: PBO:0043991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate N-acetylgalactosaminyltransferase 1","termid":"PBO:0043991"}


id: PBO:0046192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELMO domain containing 3","termid":"PBO:0046192"}


id: GO:1902663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-L-cysteine S-palmitoylation.","definition_xrefs":["PMID:23444136","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidyl-L-cysteine S-palmitoylation","termid":"GO:1902662"},{"relation_name":"is_a","term_name":"negative regulation of protein lipidation","termid":"GO:1903060"},{"relation_name":"negatively_regulates","term_name":"peptidyl-L-cysteine S-palmitoylation","termid":"GO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-L-cysteine S-palmitoylation","synonyms":[{"name":"down regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"down-regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"downregulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"inhibition of peptidyl-L-cysteine S-palmitoylation","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-cysteine S-palmitoylation","type":"narrow"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-cysteine S-palmitoylation","type":"exact"}],"termid":"GO:1902663"}


id: GO:1903599
data:
  {"annotated_genes":["SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67902],"is_not":false,"summary":null,"term":"GO:1903599"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrion degradation by autophagy.","definition_xrefs":["GOC:PARL","PMID:21753002","GOC:TermGenie","GO_REF:0000058","GOC:autophagy","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of autophagy","termid":"GO:0010508"},{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of autophagy of mitochondrion","termid":"GO:1903146"},{"relation_name":"positively_regulates","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0006914","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"positive regulation of autophagy of mitochondrion","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"activation of mitochondrion degradation","type":"related"},{"name":"activation of mitophagy","type":"narrow"},{"name":"positive regulation of mitochondrial degradation","type":"broad"},{"name":"up regulation of mitochondrion degradation","type":"broad"},{"name":"up regulation of mitophagy","type":"exact"},{"name":"up-regulation of mitochondrion degradation","type":"broad"},{"name":"up-regulation of mitophagy","type":"exact"},{"name":"upregulation of mitochondrion degradation","type":"broad"},{"name":"upregulation of mitophagy","type":"exact"}],"termid":"GO:1903599","terms_by_termid":{"GO:1903599":null}}


id: GO:0016650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces an acceptor other than quinone or similar compound, disulfide, NAD, NADP, oxygen or a flavin.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-NH group of donors, other acceptors (obsolete GO:0016650)","synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH group of donors, other acceptors","type":"exact"}],"termid":"GO:0016650"}


id: PBO:0036105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_heterochromatin_island_during_vegetative_growth","termid":"PBO:0036105"}


id: GO:0160069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of surfactant by a cell or tissue.","definition_xrefs":["PMID:19824815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"},{"relation_name":"part_of","term_name":"surfactant homeostasis","termid":"GO:0043129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"surfactant secretion","termid":"GO:0160069"}


id: GO:0032379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of lipids within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of intracellular lipid transport","termid":"GO:0032377"},{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"positively_regulates","term_name":"intracellular lipid transport","termid":"GO:0032365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intracellular lipid transport","synonyms":[{"name":"activation of intracellular lipid transport","type":"narrow"},{"name":"stimulation of intracellular lipid transport","type":"narrow"},{"name":"up regulation of intracellular lipid transport","type":"exact"},{"name":"up-regulation of intracellular lipid transport","type":"exact"},{"name":"upregulation of intracellular lipid transport","type":"exact"}],"termid":"GO:0032379"}


id: GO:1902430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amyloid-beta formation.","definition_xrefs":["PMID:22992957","GOC:hjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"regulation of amyloid-beta formation","termid":"GO:1902003"},{"relation_name":"is_a","term_name":"negative regulation of amyloid precursor protein catabolic process","termid":"GO:1902992"},{"relation_name":"negatively_regulates","term_name":"amyloid-beta formation","termid":"GO:0034205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amyloid-beta formation","synonyms":[{"name":"down regulation of beta-amyloid formation","type":"exact"},{"name":"down-regulation of beta-amyloid formation","type":"exact"},{"name":"downregulation of beta-amyloid formation","type":"exact"},{"name":"inhibition of beta-amyloid formation","type":"narrow"},{"name":"negative regulation of beta-amyloid formation","type":"exact"}],"termid":"GO:1902430"}


id: GO:0004343
data:
  {"annotated_genes":["SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69568],"is_not":false,"summary":null,"term":"GO:0004343"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucosamine 6-phosphate + acetyl-CoA = N-acetyl-D-glucosamine 6-phosphate + CoA + H+.","definition_xrefs":["EC:2.3.1.4","RHEA:10292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glucosamine 6-phosphate N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLUCOSAMINEPNACETYLTRANS-RXN","KEGG_REACTION:R02058","Reactome:R-HSA-449734"],"synonyms":[{"name":"D-glucosamine-6-P N-acetyltransferase activity","type":"related"},{"name":"N-acetylglucosamine-6-phosphate synthase activity","type":"related"},{"name":"acetyl-CoA:D-glucosamine-6-phosphate N-acetyltransferase activity","type":"related"},{"name":"aminodeoxyglucosephosphate acetyltransferase activity","type":"related"},{"name":"glucosamine 6-phosphate acetylase activity","type":"related"},{"name":"glucosamine-6-phosphate acetylase activity","type":"related"},{"name":"glucosamine-phosphate N-acetyltransferase activity","type":"exact"},{"name":"phosphoglucosamine N-acetylase activity","type":"related"},{"name":"phosphoglucosamine acetylase activity","type":"related"},{"name":"phosphoglucosamine transacetylase activity","type":"related"}],"termid":"GO:0004343","terms_by_termid":{"GO:0004343":null}}


id: PBO:0051649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 4","termid":"PBO:0051649"}


id: PBO:0060393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 2A","termid":"PBO:0060393"}


id: PBO:0056512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBNL1 antisense RNA 1","termid":"PBO:0056512"}


id: GO:0008666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3,4,5-tetrahydrodipicolinate + H2O + succinyl-CoA = L-2-succinylamino-6-oxopimelate + CoA.","definition_xrefs":["RHEA:17325","EC:2.3.1.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-succinyltransferase activity","termid":"GO:0016749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity","secondary_identifiers":["MetaCyc:TETHYDPICSUCC-RXN","KEGG_REACTION:R04365"],"synonyms":[{"name":"THDP N-succinyltransferase activity","type":"exact"},{"name":"succinyl-CoA:(S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:tetrahydrodipicolinate N-succinyltransferase activity","type":"related"},{"name":"tetrahydrodipicolinate N-succinyltransferase activity","type":"related"},{"name":"tetrahydrodipicolinate succinylase activity","type":"related"},{"name":"tetrahydrodipicolinate succinyltransferase activity","type":"related"},{"name":"tetrahydropicolinate succinylase activity","type":"related"}],"termid":"GO:0008666"}


id: PBO:0082248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase; which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; F1 translationally regulates ATP6 and ATP8 expression to achieve a balanced output of ATP synthase genes encoded in nucleus and mitochondria; phosphorylated; N-terminally propionylated in vivo","termid":"PBO:0082248"}


id: PBO:0061890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligophrenin 1","termid":"PBO:0061890"}


id: GO:0032936
data:
  {"annotated_genes":["SJAG_04018","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101917,105940],"is_not":false,"summary":null,"term":"GO:0032936"}]},"cv_name":"cellular_component","definition":"A protein complex formed by the association of sterol regulatory element binding protein (SREBP) and SREBP-cleavage-activating protein (SCAP) in the ER membrane; in the absence of sterols, the SREBP-SCAP complex is packaged into COPII vesicles and travels to the Golgi apparatus to be processed.","definition_xrefs":["PMID:12923525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SREBP-SCAP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Sre1-Scp1 complex","type":"exact"}],"termid":"GO:0032936","terms_by_termid":{"GO:0032936":null}}


id: PR:Q9HE06
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DHX35 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00877","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.09","secondary_identifiers":["UniProtKB:Q9HE06"],"synonyms":[{"name":"DEAH-box helicase C20H4.09 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DHX35","type":"exact"}],"termid":"PR:Q9HE06"}


id: PBO:0011414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_absence_of","termid":"PBO:0011414"}


id: GO:0016404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprost-13-enoate + NAD+ = (5Z,13E)-11-alpha-hydroxy-9,15-dioxoprost-13-enoate + NADH + H+.","definition_xrefs":["EC:1.1.1.141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"15-hydroxyprostaglandin dehydrogenase (NAD+) activity","secondary_identifiers":["Reactome:R-HSA-9024766","Reactome:R-HSA-2161779","Reactome:R-HSA-9023968","RHEA:11876","MetaCyc:1.1.1.141-RXN","Reactome:R-HSA-2161662"],"synonyms":[{"name":"(5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate:NAD+ 15-oxidoreductase activity","type":"related"},{"name":"11alpha,15-dihydroxy-9-oxoprost-13-enoate:NAD+ 15-oxidoreductase activity","type":"related"},{"name":"15-OH-PGDH","type":"related"},{"name":"15-hydroxyprostaglandin dehydrogenase activity","type":"related"},{"name":"15-hydroxyprostanoic dehydrogenase activity","type":"related"},{"name":"NAD+-dependent 15-hydroxyprostaglandin dehydrogenase (type I)","type":"related"},{"name":"NAD-specific 15-hydroxyprostaglandin dehydrogenase activity","type":"related"},{"name":"prostaglandin dehydrogenase activity","type":"related"}],"termid":"GO:0016404"}


id: FYPO:0002480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, and subsequently forms a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"viable after spore germination with elongated germ tube","synonyms":[{"name":"viable following spore germination with elongated germ tube","type":"exact"},{"name":"viable germinated spore with elongated germ tube","type":"exact"}],"termid":"FYPO:0002480"}


id: GO:0061027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the development of the umbilical cord, from its formation to the mature structure. The umbilical cord is an organ or embryonic origin consisting of the 2 umbilical arteries and the one umbilical vein. The umbilical cord connects the cardiovascular system of the fetus to the mother via the placenta.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"umbilical cord development","termid":"GO:0061027"}


id: PBO:0079204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSR2 ribosome maturation factor","termid":"PBO:0079204"}


id: PBO:0077142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 2","termid":"PBO:0077142"}


id: PBO:0040699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 related protein A1","termid":"PBO:0040699"}


id: PBO:0008966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIb-related protein (predicted)","termid":"PBO:0008966"}


id: GO:0015673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of silver (Ag+) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"silver ion transport","synonyms":[{"name":"silver transport","type":"exact"}],"termid":"GO:0015673"}


id: PBO:0017832
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Cdc Four","termid":"PBO:0017832"}


id: PBO:0049492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.B variant histone 2","termid":"PBO:0049492"}


id: PBO:0069114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 363, pseudogene","termid":"PBO:0069114"}


id: PBO:0038779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activin A receptor type 2A","termid":"PBO:0038779"}


id: PBO:0029904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_localization_phenotype","termid":"PBO:0029904"}


id: FYPO:0007986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during mitotic interphase in which the localization of a protein to the microtubule overlap of cytoplasmic microtubule bundles is decreased.","definition_xrefs":["PomBase:mlr","PMID:19879140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to interphase microtubule","termid":"FYPO:0006182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to interphase microtubule bundle overlap","termid":"FYPO:0007986"}


id: GO:0050004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + isoflavone = UDP + isoflavone 7-O-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.170","MetaCyc:ISOFLAVONE-7-O-GLUCOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"isoflavone 7-O-glucosyltransferase activity","secondary_identifiers":["RHEA:56344"],"synonyms":[{"name":"UDP-glucose:isoflavone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-flavonoid 7-O-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:isoflavone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:isoflavone 7-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-isoflavone 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0050004"}


id: GO:2001281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle cell chemotaxis toward tendon cell.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"muscle cell chemotaxis toward tendon cell","termid":"GO:0036061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle cell chemotaxis toward tendon cell","synonyms":[{"name":"regulation of muscle cell attraction","type":"related"},{"name":"regulation of muscle cell chemotaxis towards tendon cell","type":"exact"}],"termid":"GO:2001281"}


id: GO:1900225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of NLRP3 inflammasome complex assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"part_of","term_name":"regulation of inflammasome-mediated signaling pathway","termid":"GO:0141085"},{"relation_name":"regulates","term_name":"NLRP3 inflammasome complex assembly","termid":"GO:0044546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"regulation of NLRP3 inflammasome complex assembly","synonyms":[{"name":"regulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"regulation of NLRP3 inflammasome activation","type":"related"}],"termid":"GO:1900225"}


id: PBO:0031411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched_vegetative_cell","termid":"PBO:0031411"}


id: PBO:0040493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 10","termid":"PBO:0040493"}


id: PBO:0017456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inheres_in_part_of","termid":"PBO:0017456"}


id: PATO:0000381
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A frequency which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"frequency","termid":"PATO:0000044"},{"relation_name":"is_a","term_name":"decreased rate","termid":"PATO:0000911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased frequency","synonyms":[{"name":"infrequent","type":"related"},{"name":"low frequency","type":"exact"}],"termid":"PATO:0000381"}


id: GO:0019830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cadmium sensitivity/resistance (obsolete GO:0019830)","synonyms":[{"name":"cadmium sensitivity/resistance","type":"exact"}],"termid":"GO:0019830"}


id: GO:0061401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of detection of, or exposure to, a decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to a hypotonic environment (obsolete GO:0061401)","termid":"GO:0061401"}


id: GO:1900224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1900224)","synonyms":[{"name":"activation of nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"activation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"activation of nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"positive regulation of nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"positive regulation of nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"positive regulation of nodal signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"up regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"up-regulation of nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"up-regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up-regulation of nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"upregulation of nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"upregulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"upregulation of nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"}],"termid":"GO:1900224"}


id: PBO:0069560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 832, pseudogene","termid":"PBO:0069560"}


id: PBO:0039882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 42","termid":"PBO:0039882"}


id: PBO:0004460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp43 (predicted)","termid":"PBO:0004460"}


id: PBO:0053540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 544","termid":"PBO:0053540"}


id: PBO:0074669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 55","termid":"PBO:0074669"}


id: PBO:0033810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_at_telomere_during_nitrogen_starvation","termid":"PBO:0033810"}


id: GO:0060846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a blood vessel endothelial cell fate and its capacity to differentiate into a blood vessel endothelial cell.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell fate commitment","termid":"GO:0060839"},{"relation_name":"part_of","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell fate commitment","termid":"GO:0060846"}


id: FYPO:0002964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to  nuclear exosome foci is increased. Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PomBase:mah","PMID:23980030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear exosome focus","termid":"FYPO:0002963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to nuclear exosome focus","synonyms":[{"name":"increased protein localisation to nuclear exosome focus","type":"exact"},{"name":"increased protein localization to Mmi1 focus","type":"exact"},{"name":"increased protein localization to Mmi1 nuclear focus","type":"exact"},{"name":"increased protein localization to nuclear exosome foci","type":"exact"},{"name":"increased protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nuclear exosome focus during vegetative growth","type":"exact"}],"termid":"FYPO:0002964"}


id: PR:O74738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set10 gene.","definition_xrefs":["UniProtKB:O74738","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal lysine N-methyltransferase set10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.13c","synonyms":[{"name":"SET domain-containing protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-set10","type":"exact"}],"termid":"PR:O74738"}


id: GO:0045476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a nurse cell. During late oogenesis, following the transfer of substances from the nurse cells to the oocyte, nurse cell remnants are cleared from the egg chamber by apoptotic process.","definition_xrefs":["CL:0000026","PMID:11973306","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nurse cell apoptotic process","synonyms":[{"name":"apoptosis of nurse cells","type":"exact"},{"name":"invertebrate nurse cell apoptosis","type":"narrow"},{"name":"nurse cell apoptosis","type":"narrow"},{"name":"nurse cell programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of nurse cells by apoptosis","type":"exact"}],"termid":"GO:0045476"}


id: GO:0048509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meristem development, the biological process whose specific outcome is the progression of the meristem over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem development","termid":"GO:0048509"}


id: GO:0043842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (KDO)-lipid IVA + CMP-3-deoxy-D-manno-octulosonate = KDO2-lipid IVA + CMP, and lipid IVA + CMP-3-deoxy-D-manno-octulosonate = (KDO)-lipid IVA + CMP.","definition_xrefs":["PMID:9195966","PMID:1577828","PMID:2033061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"Kdo transferase activity","secondary_identifiers":["EC:2.4.99.14","EC:2.4.99.12","EC:2.4.99.13","MetaCyc:KDOTRANS-RXN","EC:2.4.99.15","MetaCyc:KDOTRANS2-RXN"],"synonyms":[{"name":"3-deoxy-D-manno-octulosonic-acid transferase activity","type":"exact"},{"name":"WaaA","type":"related"},{"name":"kdtA","type":"related"}],"termid":"GO:0043842"}


id: PBO:0079376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 11","termid":"PBO:0079376"}


id: GO:0006710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"androgen metabolic process","termid":"GO:0008209"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"androgen catabolic process","synonyms":[{"name":"androgen breakdown","type":"exact"},{"name":"androgen catabolism","type":"exact"},{"name":"androgen degradation","type":"exact"}],"termid":"GO:0006710"}


id: PBO:0011512
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.64","termid":"PBO:0011512"}


id: PBO:0068792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 29, pseudogene","termid":"PBO:0068792"}


id: RO:0002641
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of intracellular endoparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"has_endoparasite","termid":"RO:0002635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_intracellular_endoparasite","termid":"RO:0002641"}


id: PBO:0035757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_microtubule_nucleation_from_eMTOC","termid":"PBO:0035757"}


id: PBO:0110825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, sexual differentiation inducing Esc1","termid":"PBO:0110825"}


id: PBO:0082884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin; forms a functional kinase complex with Pho85p cyclin-dependent kinase (Cdk), expressed in late M/early G1 phase, activated by Swi5p; PCL9 has a paralog, PCL2, that arose from the whole genome duplication","termid":"PBO:0082884"}


id: GO:0047221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + UDP-D-galactose = 2-(alpha-D-galactosyl)-sn-glycerol 3-phosphate + H+ + UDP.","definition_xrefs":["EC:2.4.1.137","RHEA:14285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"sn-glycerol-3-phosphate 2-alpha-galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.137-RXN","KEGG_REACTION:R00853"],"synonyms":[{"name":"FPS","type":"related"},{"name":"UDP-galactose, sn-3-glycerol phosphate:1->2' galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:sn-glycerol-3-phosphate 2-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:sn-glycerol-3-phosphate-2-D-galactosyl transferase activity","type":"related"},{"name":"UDPgalactose:sn-glycerol-3-phosphate 2-alpha-D-galactosyltransferase activity","type":"related"},{"name":"floridoside phosphate synthase activity","type":"related"},{"name":"floridoside phosphate synthetase activity","type":"related"},{"name":"floridoside-phosphate synthase activity","type":"related"}],"termid":"GO:0047221"}


id: PBO:0004046
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opposite strand to sno20","termid":"PBO:0004046"}


id: PBO:0071593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 10","termid":"PBO:0071593"}


id: GO:0016462
data:
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id: PBO:0071853
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id: PBO:0034234
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id: GO:2000623
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id: PBO:0048527
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id: PBO:0038421
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id: PBO:0071738
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id: PBO:0028487
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id: PBO:0029203
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id: PBO:0075914
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id: GO:0051470
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id: PBO:0081326
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id: PBO:0011454
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id: PBO:0080037
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id: PBO:0079309
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id: GO:0046889
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id: GO:0070624
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id: FYPO:0005351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other property of a guanyl-nucleotide exchange factor activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased guanyl-nucleotide exchange factor activity","synonyms":[{"name":"increased GEF activity","type":"exact"}],"termid":"FYPO:0005351"}


