# terms

id: PBO:0000215
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible splicing","termid":"PBO:0000215"}


id: GO:0046300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4-dichlorophenoxyacetic acid metabolic process","termid":"GO:0018901"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2,4-dichlorophenoxyacetic acid catabolic process","synonyms":[{"name":"2,4-dichlorophenoxyacetic acid breakdown","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid catabolism","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid degradation","type":"exact"}],"termid":"GO:0046300"}


id: PR:Q9C0W0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0W0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein mis15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP22H7.09c","synonyms":[{"name":"Spom972h-mis15","type":"exact"},{"name":"sim4 complex subunit mis15 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C0W0"}


id: PBO:0018271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO activating enzyme E1-type Uba2 (predicted)","termid":"PBO:0018271"}


id: PBO:0087369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT methyltransferase; catalyzes omega-monomethylation of Rps3p on Arg-146; not an essential gene; predicted to be involved in rRNA processing and ribosome biogenesis and in biopolymer catabolism","termid":"PBO:0087369"}


id: PBO:0065201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 31","termid":"PBO:0065201"}


id: GO:0043208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid binding","termid":"GO:0046625"},{"relation_name":"is_a","term_name":"glycolipid binding","termid":"GO:0051861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"glycosphingolipid binding","termid":"GO:0043208"}


id: PBO:0059206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X13, pseudogene","termid":"PBO:0059206"}


id: GO:0140207
data:
  {"annotated_genes":["SJAG_01660","SJAG_01983"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99110],"is_not":false,"summary":null,"term":"GO:0140207"},{"annotations":[91631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"}]},"cv_name":"biological_process","definition":"The directed movement of a tripeptide from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:22226946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tripeptide transmembrane transport","termid":"GO:0035443"},{"relation_name":"is_a","term_name":"oligopeptide import across plasma membrane","termid":"GO:0140205"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01660":null,"SJAG_01983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"tripeptide import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140207","terms_by_termid":{"GO:0098709":null,"GO:0140207":null}}


id: PBO:0063267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 13","termid":"PBO:0063267"}


id: PBO:0055680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase I","termid":"PBO:0055680"}


id: PBO:0044671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damage specific DNA binding protein 2","termid":"PBO:0044671"}


id: PBO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 3","termid":"PBO:0046064"}


id: GO:0072011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the glomerular endothelium over time, from its formation to the mature structure. The glomerular endothelium is an epithelial tissue that covers the internal surfaces of the glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelium development","termid":"GO:0003158"},{"relation_name":"is_a","term_name":"glomerular epithelium development","termid":"GO:0072010"},{"relation_name":"part_of","term_name":"glomerulus vasculature development","termid":"GO:0072012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular endothelium development","termid":"GO:0072011"}


id: FYPO:0007400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome does not occur during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during mitotic interphase","termid":"FYPO:0007174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to kinetochore during mitotic interphase","synonyms":[{"name":"abolished protein localisation to kinetochore during interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to kinetochore during interphase of mitotic cell cycle","type":"related"},{"name":"protein localization to kinetochore abolished during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0007400"}


id: GO:1900383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic plasticity, the ability of synapses to change as circumstances require, via receptor localization to the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell. Processes may include receptor transport to, and/or maintenance at, the synapse.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:22464329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"regulation of synaptic plasticity by receptor localization to synapse","synonyms":[{"name":"regulation of synaptic plasticity by receptor localisation to synapse","type":"exact"}],"termid":"GO:1900383"}


id: GO:0031067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the removal of acetyl groups to histones in centromeric DNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deacetylation at centromere (obsolete GO:0031067)","synonyms":[{"name":"down regulation of histone deacetylation at centromere","type":"exact"},{"name":"down-regulation of histone deacetylation at centromere","type":"exact"},{"name":"downregulation of histone deacetylation at centromere","type":"exact"},{"name":"inhibition of histone deacetylation at centromere","type":"narrow"}],"termid":"GO:0031067"}


id: PBO:0111340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated WD repeat protein Nan1/Utp17","termid":"PBO:0111340"}


id: FYPO:0007970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule occurs at a higher rate, or speed, than normal.","definition_xrefs":["PMID:35293864","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rate of microtubule polymerization during vegetative growth","termid":"FYPO:0007955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of microtuble polymerization during vegetative growth","termid":"FYPO:0007970"}


id: PBO:0059869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 7","termid":"PBO:0059869"}


id: PBO:0066042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1A, member of RAS oncogene family pseudogene","termid":"PBO:0066042"}


id: GO:0047778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [citrate (pro-3S)-lyase](acetyl form) + H2O = [citrate (pro-3S)-lyase](thiol form) + acetate.","definition_xrefs":["EC:3.1.2.16","MetaCyc:CITRATE-PRO-3S-LYASE-THIOLESTERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"[citrate-(pro-3S)-lyase] thiolesterase activity","secondary_identifiers":["RHEA:13657"],"synonyms":[{"name":"[citrate-(pro-3S)-lyase] thioesterase activity","type":"related"},{"name":"citrate (pro-3S)-lyase thiolesterase activity","type":"exact"},{"name":"citrate lyase deacetylase activity","type":"related"},{"name":"citrate-(pro-3S)-lyase thioesterase activity","type":"related"},{"name":"citrate-(pro-3S)-lyase thiolesterase activity","type":"related"},{"name":"citrate-(pro-3S)-lyase(acetyl-form) hydrolase activity","type":"related"}],"termid":"GO:0047778"}


id: GO:0031527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a filopodium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"filopodium","termid":"GO:0030175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"filopodium membrane","termid":"GO:0031527"}


id: PBO:0038351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_positive_regulatory_component_activity","termid":"PBO:0038351"}


id: PBO:0091499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome inhibitor Fub1","termid":"PBO:0091499"}


id: PBO:0064368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase 2","termid":"PBO:0064368"}


id: SO:0001609
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An elongation of a polypeptide sequence deriving from a sequence variant extending the CDS.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_polypeptide","synonyms":[{"name":"elongated polypeptide","type":"exact"}],"termid":"SO:0001609"}


id: GO:1900261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA-directed 5'-3' RNA polymerase activity.","definition_xrefs":["GOC:pf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of RNA-dependent RNA polymerase activity","termid":"GO:1900259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of RNA-dependent RNA polymerase activity","synonyms":[{"name":"activation of 3D polymerase activity","type":"exact"},{"name":"activation of PB1 proteins","type":"related"},{"name":"activation of PB2 proteins","type":"related"},{"name":"activation of RDRP","type":"related"},{"name":"activation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"activation of RNA replicase activity","type":"exact"},{"name":"activation of RNA synthetase activity","type":"related"},{"name":"activation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"activation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"activation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"activation of RNA-directed RNA polymerase activity","type":"narrow"},{"name":"activation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"activation of phage f2 replicase","type":"narrow"},{"name":"activation of polymerase L","type":"related"},{"name":"activation of ribonucleic acid replicase activity","type":"exact"},{"name":"activation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"activation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"activation of ribonucleic replicase activity","type":"exact"},{"name":"activation of ribonucleic synthetase activity","type":"related"},{"name":"activation of transcriptase","type":"broad"},{"name":"positive regulation of 3D polymerase activity","type":"exact"},{"name":"positive regulation of PB1 proteins","type":"related"},{"name":"positive regulation of PB2 proteins","type":"related"},{"name":"positive regulation of RDRP","type":"related"},{"name":"positive regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"positive regulation of RNA replicase activity","type":"exact"},{"name":"positive regulation of RNA synthetase activity","type":"related"},{"name":"positive regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"positive regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of RNA-directed 5'-3' RNA polymerase activity","type":"exact"},{"name":"positive regulation of RNA-directed RNA polymerase activity","type":"broad"},{"name":"positive regulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"positive regulation of phage f2 replicase","type":"narrow"},{"name":"positive regulation of polymerase L","type":"related"},{"name":"positive regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"positive regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"positive regulation of ribonucleic replicase activity","type":"exact"},{"name":"positive regulation of ribonucleic synthetase activity","type":"related"},{"name":"positive regulation of transcriptase","type":"broad"},{"name":"up regulation of 3D polymerase activity","type":"exact"},{"name":"up regulation of PB1 proteins","type":"related"},{"name":"up regulation of PB2 proteins","type":"related"},{"name":"up regulation of Q-beta replicase activity","type":"exact"},{"name":"up regulation of RDRP","type":"related"},{"name":"up regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"up regulation of RNA replicase activity","type":"exact"},{"name":"up regulation of RNA synthetase activity","type":"related"},{"name":"up regulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"up regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"up regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"up regulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"up regulation of phage f2 replicase","type":"narrow"},{"name":"up regulation of polymerase L","type":"related"},{"name":"up regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"up regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"up regulation of ribonucleic replicase activity","type":"exact"},{"name":"up regulation of ribonucleic synthetase activity","type":"related"},{"name":"up regulation of transcriptase","type":"broad"},{"name":"up-regulation of 3D polymerase activity","type":"exact"},{"name":"up-regulation of PB1 proteins","type":"related"},{"name":"up-regulation of PB2 proteins","type":"related"},{"name":"up-regulation of Q-beta replicase activity","type":"exact"},{"name":"up-regulation of RDRP","type":"related"},{"name":"up-regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"up-regulation of RNA replicase activity","type":"exact"},{"name":"up-regulation of RNA synthetase activity","type":"related"},{"name":"up-regulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"up-regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"up-regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"up-regulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"up-regulation of phage f2 replicase","type":"narrow"},{"name":"up-regulation of polymerase L","type":"related"},{"name":"up-regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"up-regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"up-regulation of ribonucleic replicase activity","type":"exact"},{"name":"up-regulation of ribonucleic synthetase activity","type":"related"},{"name":"up-regulation of transcriptase","type":"broad"},{"name":"upregulation of 3D polymerase activity","type":"exact"},{"name":"upregulation of PB1 proteins","type":"related"},{"name":"upregulation of PB2 proteins","type":"related"},{"name":"upregulation of Q-beta replicase activity","type":"exact"},{"name":"upregulation of RDRP","type":"related"},{"name":"upregulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"upregulation of RNA replicase activity","type":"exact"},{"name":"upregulation of RNA synthetase activity","type":"related"},{"name":"upregulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"upregulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"upregulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"upregulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"upregulation of phage f2 replicase","type":"narrow"},{"name":"upregulation of polymerase L","type":"related"},{"name":"upregulation of ribonucleic acid replicase activity","type":"exact"},{"name":"upregulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"upregulation of ribonucleic replicase activity","type":"exact"},{"name":"upregulation of ribonucleic synthetase activity","type":"related"},{"name":"upregulation of transcriptase","type":"broad"}],"termid":"GO:1900261"}


id: GO:0061733
data:
  {"annotated_genes":["SJAG_03546","SJAG_02773","SJAG_02990","SJAG_00676","SJAG_03537","SJAG_01204","SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004402"},{"annotations":[114609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[87516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010484"},{"annotations":[87517,86870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[87518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[95065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[105418,105419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[87519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[114610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[84564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[95066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046972"},{"annotations":[84565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[84566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + lysine in peptide = CoA + N-acetyl-lysine-peptide.","definition_xrefs":["GOC:dph","RHEA:45948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide N-acetyltransferase activity","termid":"GO:0034212"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00676":null,"SJAG_01204":null,"SJAG_02165":null,"SJAG_02773":null,"SJAG_02990":null,"SJAG_03537":null,"SJAG_03546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0034212","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"peptide-lysine-N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6811508","Reactome:R-HSA-9756494","Reactome:R-HSA-9620515","Reactome:R-HSA-8951966","Reactome:R-HSA-9617758","Reactome:R-HSA-9626945","Reactome:R-HSA-9701531"],"synonyms":[{"name":"peptide-lysine-N-acetylase activity","type":"exact"},{"name":"protein acetylase activity","type":"broad"},{"name":"protein acetyltransferase activity","type":"broad"},{"name":"protein-lysine-N-acetylase activity","type":"exact"}],"termid":"GO:0061733","terms_by_termid":{"GO:0004402":null,"GO:0010484":null,"GO:0010485":null,"GO:0032931":null,"GO:0036408":null,"GO:0043992":null,"GO:0043993":null,"GO:0043995":null,"GO:0043996":null,"GO:0043997":null,"GO:0043998":null,"GO:0044016":null,"GO:0046972":null}}


id: GO:0046897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal tyrosine of proteins to form the derivative N-methyl-L-tyrosine.","definition_xrefs":["RESID:AA0338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-tyrosine methylation","termid":"GO:0046897"}


id: FYPO:0006284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dihydroxylation of one or more proline residues in specific proteins, or at specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PMID:29083304","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein-proline dihydroxylation during vegetative growth","synonyms":[{"name":"decreased protein-proline dihydroxylation during mitotic cell cycle","type":"related"},{"name":"decreased protein-proline dioxygenation during vegetative growth","type":"exact"},{"name":"reduced protein-proline dihydroxylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006284"}


id: PBO:0046042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit A","termid":"PBO:0046042"}


id: PBO:0060710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 7","termid":"PBO:0060710"}


id: PBO:0060954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor kappa B subunit 2","termid":"PBO:0060954"}


id: PATO:0001684
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A magnetism which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"magnetic","termid":"PATO:0001685"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased magnetism","synonyms":[{"name":"low magnetism","type":"exact"}],"termid":"PATO:0001684"}


id: PBO:0062186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 5","termid":"PBO:0062186"}


id: GO:0032646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of hepatocyte growth factor production.","definition_xrefs":["PMID:1838014","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"hepatocyte growth factor production","termid":"GO:0032605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of hepatocyte growth factor production","secondary_identifiers":["GO:0048176"],"synonyms":[{"name":"regulation of HGF production","type":"exact"},{"name":"regulation of hepatocyte growth factor biosynthetic process","type":"narrow"},{"name":"regulation of scatter factor production","type":"exact"}],"termid":"GO:0032646"}


id: PBO:0061168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Leu (TAA) 6-1","termid":"PBO:0061168"}


id: PBO:0090596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane copper transporter complex subunit Ctr4","termid":"PBO:0090596"}


id: PBO:0064181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XH, pseudogene","termid":"PBO:0064181"}


id: _global:function_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"characteristic_of","termid":"_global:characteristic_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function_of","secondary_identifiers":["RO:0000079"],"termid":"_global:function_of"}


id: CHEBI:15379
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioxygen","termid":"CHEBI:15379"}


id: PBO:0039895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 1","termid":"PBO:0039895"}


id: PBO:0091994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase","termid":"PBO:0091994"}


id: PBO:0030517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_brefeldin_A","termid":"PBO:0030517"}


id: PBO:0027663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_heterochromatin_maintenance","termid":"PBO:0027663"}


id: PBO:0070029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1326, pseudogene","termid":"PBO:0070029"}


id: GO:1902574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in negative regulation of leucine import.","definition_xrefs":["PMID:22992726","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of leucine import by regulation of transcription from RNA polymerase II promoter (obsolete GO:1902574)","termid":"GO:1902574"}


id: PBO:0012039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator Rng2-like (predicted)","termid":"PBO:0012039"}


id: PBO:0049568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 5","termid":"PBO:0049568"}


id: PBO:0003551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein But2","termid":"PBO:0003551"}


id: GO:0045461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.","definition_xrefs":["PMID:10618248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin biosynthetic process","termid":"GO:0009403"},{"relation_name":"is_a","term_name":"sterigmatocystin metabolic process","termid":"GO:0045460"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound biosynthetic process","termid":"GO:1901378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"sterigmatocystin biosynthetic process","synonyms":[{"name":"sterigmatocystin anabolism","type":"exact"},{"name":"sterigmatocystin biosynthesis","type":"exact"},{"name":"sterigmatocystin formation","type":"exact"},{"name":"sterigmatocystin synthesis","type":"exact"}],"termid":"GO:0045461"}


id: PBO:0075927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 19","termid":"PBO:0075927"}


id: GO:0004309
data:
  {"annotated_genes":["SJAG_01154","SJAG_03964","SJAG_00570"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91897,101273,107881],"is_not":false,"summary":null,"term":"GO:0004309"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: polyphosphate(n) + H2O = polyphosphate(n-1) + phosphate.","definition_xrefs":["EC:3.6.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00570":null,"SJAG_01154":null,"SJAG_03964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"exopolyphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:EXOPOLYPHOSPHATASE-RXN","RHEA:21528"],"synonyms":[{"name":"Gra-Pase activity","type":"related"},{"name":"acid phosphoanhydride phosphohydrolase activity","type":"related"},{"name":"exopolypase activity","type":"related"},{"name":"metaphosphatase activity","type":"broad"},{"name":"polyphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0004309","terms_by_termid":{"GO:0004309":null}}


id: PBO:0001455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic PUF family protein 1 (predicted)","termid":"PBO:0001455"}


id: PBO:0027063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0027063"}


id: GO:1904148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonylphenol stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:19260726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to nonylphenol","termid":"GO:1904147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nonylphenol","termid":"GO:1904148"}


id: GO:0043539
data:
  {"annotated_genes":["SJAG_03340","SJAG_03453","SJAG_04509","SJAG_02605","SJAG_03699","SJAG_02057","SJAG_03695","SJAG_00439","SJAG_01401","SJAG_04614","SJAG_01213","SJAG_04140","SJAG_03090","SJAG_00333","SJAG_04502","SJAG_00457","SJAG_03371","SJAG_03618","SJAG_00142"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84042,85353,86966,87241,87290,87291,96084,101203,105360,106639,109067,113356,114432],"is_not":false,"summary":null,"term":"GO:0043539"},{"annotations":[109066,107007,104968,113154,101093,108177,97723,107292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a protein serine/threonine kinase.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activator activity","termid":"GO:0030295"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00333":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_02057":null,"SJAG_02605":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"protein serine/threonine kinase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein ser/thr kinase activator activity","type":"exact"}],"termid":"GO:0043539","terms_by_termid":{"GO:0043539":null,"GO:0061575":null}}


id: PBO:0046638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 19","termid":"PBO:0046638"}


id: PR:O74497
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC285.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain-containing protein C285.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.10c","synonyms":[{"name":"Spom972h-SPCC285.10c","type":"exact"}],"termid":"PR:O74497"}


id: PBO:0043549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type III alpha 1 chain","termid":"PBO:0043549"}


id: PBO:0040996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3 pseudogene 1","termid":"PBO:0040996"}


id: SO:0000844
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is a promoter for RNA polymerase II.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000844 RNApol_II_promoter_region (obsolete SO:0000844)","termid":"SO:0000844"}


id: PR:O94550
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prohibitin-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04636","PANTHER:PTHR23222:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.16","secondary_identifiers":["UniProtKB:O94550"],"synonyms":[{"name":"Spom972h-PHB2","type":"exact"}],"termid":"PR:O94550"}


id: PBO:0072131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 8","termid":"PBO:0072131"}


id: GO:0009501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid whose main function is to synthesize and store starch.","definition_xrefs":["ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"amyloplast","secondary_identifiers":["Wikipedia:Amyloplast"],"termid":"GO:0009501"}


id: GO:0140332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes a lipopolysaccharide (LPS) from the outer leaflet of a donor membrane, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to the outer leaflet of an acceptor membrane.","definition_xrefs":["PMID:24639492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0120013","GO:0003674"],"is_obsolete":false,"name":"lipopolysaccharide transfer activity","synonyms":[{"name":"intermembrane LPS transporter activity","type":"exact"},{"name":"intermembrane lipopolysaccharide transfer activity","type":"exact"},{"name":"intermembrane lipopolysaccharide transporter activity","type":"exact"},{"name":"lipopolysaccharide carrier activity","type":"exact"}],"termid":"GO:0140332"}


id: FYPO:0007738
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes that can be transcribed by RNA polymerase II is normal (i.e. indistinguishable from wild type) during metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:33771877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to chromatin at 3' end of RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"normal condensin localization to chromatin at 3' end of RNA polymerase II-transcribed genes during mitotic metaphase","type":"broad"},{"name":"normal protein localisation to chromatin at 3' end of RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase II-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase II-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to chromatin downstream of RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007738"}


id: GO:1901898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of relaxation of cardiac muscle.","definition_xrefs":["PMID:19708671","GOC:TermGenie","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of relaxation of muscle","termid":"GO:1901078"},{"relation_name":"is_a","term_name":"regulation of relaxation of cardiac muscle","termid":"GO:1901897"},{"relation_name":"negatively_regulates","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of relaxation of cardiac muscle","synonyms":[{"name":"down regulation of relaxation of cardiac muscle","type":"exact"},{"name":"down-regulation of relaxation of cardiac muscle","type":"exact"},{"name":"downregulation of relaxation of cardiac muscle","type":"exact"},{"name":"inhibition of relaxation of cardiac muscle","type":"narrow"}],"termid":"GO:1901898"}


id: PBO:0113450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of CPF cleavage and polyadenylation factor and E3 Ub-ligase; detects polyadenylation signal in nascent pre-mRNA and triggers 3' end formation of mRNA via cleavage and polyadenylation; binds pre-mRNA via zinc knuckle and RING finger; E3 ubiquitin ligase involved in polyubiquitination of endonuclease Ysh1p; contains a ubiquitin-like (UBL) domain, a RNA-binding zinc knuckle motif and a RING finger domain; relocalizes to cytosol in response to hypoxia; homolog of human RBBP6","termid":"PBO:0113450"}


id: GO:0003172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the sinoatrial valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinoatrial valve development","synonyms":[{"name":"SA valve development","type":"exact"}],"termid":"GO:0003172"}


id: PBO:0005316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp1","termid":"PBO:0005316"}


id: PBO:0045380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP3 pseudogene 1","termid":"PBO:0045380"}


id: PBO:0024861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog/2-OG-Fe(II) oxygenase family Abh1","termid":"PBO:0024861"}


id: GO:0016669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor","secondary_identifiers":["EC:1.8.2.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, cytochrome as acceptor","type":"exact"}],"termid":"GO:0016669"}


id: GO:0097619
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as a protein trafficking machinery and is responsible for the export of proteins across the parasitophorous (symbiont-containing) vacuolar membrane and into the human host cell. The PTEX complex is located in the vacuole membrane. It is ATP-powered, and comprises heat shock protein 101 (HSP101; a ClpA/B-like ATPase from the AAA+ superfamily, of a type commonly associated with protein translocons), a parasite protein termed PTEX150, and exported protein 2 (EXP2). EXP2 is the potential channel, as it is the membrane-associated component of the core PTEX complex. Two other proteins, PTEX88 and thioredoxin 2 (TRX2), were also identified as PTEX components.","definition_xrefs":["PMID:25043043","GOC:pr","PMID:19536257","PMID:25043010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"symbiont-containing vacuole membrane","termid":"GO:0020005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"PTEX complex","synonyms":[{"name":"Plasmodium translocon of exported proteins","type":"related"}],"termid":"GO:0097619"}


id: MOD:00345
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-phenylalanine residue by a thioether bond to form 2-(S-L-cysteinyl)-L-phenylalanine.","definition_xrefs":["RESID:AA0340","PubMed:3936839","PubMed:12696888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(S-L-cysteinyl)-L-phenylalanine","synonyms":[{"name":"(2R)-2-amino-2-[(2R)-2-amino-2-carboxyethyl]sulfanyl-3-phenylpropanoic acid","type":"exact"},{"name":"(2R,5R)-2,5-diamino-3-thia-2-phenylmethylhexanedioic acid","type":"exact"},{"name":"2-(L-cystein-S-yl)-L-phenylalanine","type":"exact"},{"name":"CROSSLNK 2-cysteinyl-L-phenylalanine (Cys-Phe)","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-L-phenylalanine","type":"exact"}],"termid":"MOD:00345"}


id: GO:0006116
data:
  {"annotated_genes":["SJAG_00409","SJAG_01539","SJAG_01012","SJAG_04152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90082,92827,102582,108950],"is_not":false,"summary":null,"term":"GO:0006116"}]},"cv_name":"biological_process","definition":"A metabolic process that results in the oxidation of reduced nicotinamide adenine dinucleotide, NADH, to the oxidized form, NAD+.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH metabolic process","termid":"GO:0006734"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null,"SJAG_01539":null,"SJAG_04152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"NADH oxidation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD (reduced) dehydrogenation","type":"exact"},{"name":"NAD (reduced) oxidation","type":"exact"},{"name":"NADH dehydrogenation","type":"exact"},{"name":"reduced NAD dehydrogenation","type":"exact"},{"name":"reduced NAD oxidation","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide dehydrogenation","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide oxidation","type":"exact"}],"termid":"GO:0006116","terms_by_termid":{"GO:0006116":null}}


id: PBO:0044800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 4A","termid":"PBO:0044800"}


id: FYPO:0007563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to a pheromone occurs in G1 phase, but in the absence of starvation (i.e., in nutrient-rich conditions, under which wild-type fission yeast cells do not arrest).","definition_xrefs":["PomBase:al","PomBase:mah","PMID:11554925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest in response to pheromone","termid":"FYPO:0000530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"cell cycle arrest in mitotic G1 phase in response to pheromone without starvation","synonyms":[{"name":"cell cycle arrest in mitotic G1 phase in response to pheromone in absence of starvation","type":"exact"},{"name":"mitotic cell cycle arrest in response to pheromone in absence of starvation","type":"broad"},{"name":"pheromone-induced mitotic cell cycle arrest in mitotic G1 phase without starvation","type":"exact"}],"termid":"FYPO:0007563"}


id: PBO:0074120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 5","termid":"PBO:0074120"}


id: GO:0062063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BBSome complex.","definition_xrefs":["PMID:20603001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"BBSome binding","termid":"GO:0062063"}


id: PBO:0043155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 23","termid":"PBO:0043155"}


id: GO:1902339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in morphogenesis.","definition_xrefs":["GOC:sart","PMID:12202035","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in morphogenesis","synonyms":[{"name":"activation of morphogenetic apoptosis","type":"related"},{"name":"activation of apoptosis involved in development","type":"related"},{"name":"activation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"activation of apoptotic process involved in morphogenesis","type":"narrow"},{"name":"positive regulation of apoptosis involved in development","type":"related"},{"name":"positive regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"positive regulation of morphogenetic apoptosis","type":"related"},{"name":"up regulation of apoptosis involved in development","type":"related"},{"name":"up regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"up regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"up regulation of morphogenetic apoptosis","type":"related"},{"name":"up-regulation of apoptosis involved in development","type":"related"},{"name":"up-regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"up-regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"up-regulation of morphogenetic apoptosis","type":"related"},{"name":"upregulation of apoptosis involved in development","type":"related"},{"name":"upregulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"upregulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"upregulation of morphogenetic apoptosis","type":"related"}],"termid":"GO:1902339"}


id: GO:0050314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,3-diaminopropane + S-adenosylmethioninamine = S-methyl-5'-thioadenosine + bis(3-aminopropyl)amine + H+.","definition_xrefs":["RHEA:23244","EC:2.5.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"sym-norspermidine synthase activity","secondary_identifiers":["KEGG_REACTION:R03271","MetaCyc:SYM-NORSPERMIDINE-SYNTHASE-RXN"],"synonyms":[{"name":"S-adenosylmethioninamine:propane-1,3-diamine 3-aminopropyltransferase activity","type":"related"}],"termid":"GO:0050314"}


id: GO:0021950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that repel a precerebellar neuron as a component of the process of tangential migration.","definition_xrefs":["GOC:dgh","PMID:15157725","GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"brainstem precerebellar neuron precursor migration","termid":"GO:0021949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion involved in precerebellar neuron migration","synonyms":[{"name":"negative chemotaxis involved in precerebellar neuron migration","type":"exact"}],"termid":"GO:0021950"}


id: GO:0006742
data:
  {"annotated_genes":["SJAG_03091"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101193],"is_not":false,"summary":null,"term":"GO:0006742"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; catabolism may be of either the oxidized form, NADP, or the reduced form, NADPH.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"},{"relation_name":"is_a","term_name":"NADP metabolic process","termid":"GO:0006739"},{"relation_name":"is_a","term_name":"pyridine nucleotide catabolic process","termid":"GO:0019364"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03091":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"NADP catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NADP (oxidized) catabolic process","type":"exact"},{"name":"NADP (oxidized) catabolism","type":"exact"},{"name":"NADP (reduced) catabolic process","type":"exact"},{"name":"NADP (reduced) catabolism","type":"exact"},{"name":"NADP breakdown","type":"exact"},{"name":"NADP catabolism","type":"exact"},{"name":"NADP degradation","type":"exact"},{"name":"NADPH catabolic process","type":"exact"},{"name":"NADPH catabolism","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate catabolic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate catabolism","type":"exact"},{"name":"oxidized NADP catabolic process","type":"exact"},{"name":"oxidized NADP catabolism","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate catabolic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate catabolism","type":"exact"},{"name":"reduced NADP catabolic process","type":"exact"},{"name":"reduced NADP catabolism","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate catabolic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate catabolism","type":"exact"}],"termid":"GO:0006742","terms_by_termid":{"GO:0006742":null}}


id: PBO:0030910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_subcellular_component_during_vegetative_growth","termid":"PBO:0030910"}


id: GO:0072566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 1 production","synonyms":[{"name":"CXCL1 production","type":"exact"},{"name":"KC production","type":"exact"},{"name":"SCYB1 production","type":"exact"},{"name":"keratinocyte derived chemokine production","type":"exact"}],"termid":"GO:0072566"}


id: GO:0048526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of expanding or inflating the folded imaginal disc-derived pupal wing, and the adhering of the dorsal and ventral surfaces, to form the mature adult wing.","definition_xrefs":["GOC:mtg_sensu","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing expansion","synonyms":[{"name":"wing expansion","type":"exact"},{"name":"wing inflation","type":"exact"}],"termid":"GO:0048526"}


id: PBO:0083128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-ribulose-5-phosphate 3-epimerase; catalyzes a reaction in the non-oxidative part of the pentose-phosphate pathway; mutants are sensitive to oxidative stress","termid":"PBO:0083128"}


id: PBO:0016579
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complements S. cerevisiae RPB6","termid":"PBO:0016579"}


id: GO:1904378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintaining an endoplasmic reticulum (ER) protein in an unfolded, soluble state that contributes to its degradation by the cytoplasmic proteasome. Maintaining ER-resident proteins in an unfolded yet soluble state condition after their retro-translocation favors their turnover by the cytosolic proteasome.","definition_xrefs":["GOC:BHF","GO_REF:0000060","GOC:TermGenie","PMID:21636303","GOC:bf","GOC:nc","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of unfolded protein","termid":"GO:0036506"},{"relation_name":"part_of","term_name":"ERAD pathway","termid":"GO:0036503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"maintenance of unfolded protein involved in ERAD pathway","synonyms":[{"name":"ERAD chaperone-like activity","type":"related"},{"name":"chaperone holdase activity","type":"related"},{"name":"holdase activity","type":"related"},{"name":"maintenance of unfolded protein during ERAD","type":"related"},{"name":"maintenance of unfolded protein involved in ER-associated degradation pathway","type":"related"},{"name":"maintenance of unfolded protein involved in endoplasmic reticulum-associated degradation","type":"exact"},{"name":"maintenance of unfolded protein involved in endoplasmic reticulum-associated protein degradation pathway","type":"related"}],"termid":"GO:1904378"}


id: PBO:0027709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_positive_regulation_of_DNA-directed_DNA_polymerase_activity","termid":"PBO:0027709"}


id: PBO:0031257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_wall_biogenesis","termid":"PBO:0031257"}


id: SO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The junction where an insertion occurred.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_site","synonyms":[{"name":"insertion site","type":"exact"}],"termid":"SO:0000366"}


id: PBO:0064680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 16","termid":"PBO:0064680"}


id: GO:0001696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gastric acid secretion","synonyms":[{"name":"hydrochloric acid secretion","type":"narrow"}],"termid":"GO:0001696"}


id: FYPO:0007351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region on chromosome 3.","definition_xrefs":["PomBase:vw","PMID:31811152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 3","synonyms":[{"name":"decreased homologous chromosome pairing at RNA584 locus","type":"narrow"},{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"}],"termid":"FYPO:0007351"}


id: GO:0102484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: esculetin + UDP-alpha-D-glucose(2-) = esculin + UDP(3-) + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete esculetin glucosyltransferase activity (obsolete GO:0102484)","termid":"GO:0102484"}


id: PBO:0045023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRAS family GTPase 3","termid":"PBO:0045023"}


id: GO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Covalent addition of polyubiquitin to another protein, targeting the tagged protein for destruction.","definition_xrefs":["ISBN:0815316194","GOC:cl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein degradation tagging activity (obsolete GO:0000211)","synonyms":[{"name":"protein degradation tagging activity","type":"exact"}],"termid":"GO:0000211"}


id: GO:0022859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transmembrane transfer of a solute by a channel that opens in response to dephosphorylation of one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete dephosphorylation-gated channel activity (obsolete GO:0022859)","termid":"GO:0022859"}


id: GO:0031551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of brain-derived neurotrophic factor-activated receptor activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of brain-derived neurotrophic factor-activated receptor activity","synonyms":[{"name":"regulation of BDNF receptor activity","type":"exact"},{"name":"regulation of brain-derived neurotrophic factor receptor activity","type":"exact"}],"termid":"GO:0031551"}


id: PBO:0112182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional GLNase (glutamine amidotransferase)/CPSase (carbamoylphosphate synthetase)/ATCase (aspartate transcarbamoylase) Ura1","termid":"PBO:0112182"}


id: PBO:0044987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 38","termid":"PBO:0044987"}


id: GO:0019384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of caprolactam, hexahydro-2h-azepin-2-one, a cyclic amide of caproic acid.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"caprolactam metabolic process","termid":"GO:0018883"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"lactam catabolic process","termid":"GO:0072340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"caprolactam catabolic process","secondary_identifiers":["MetaCyc:P621-PWY"],"synonyms":[{"name":"caprolactam breakdown","type":"exact"},{"name":"caprolactam catabolism","type":"exact"},{"name":"caprolactam degradation","type":"exact"}],"termid":"GO:0019384"}


id: GO:1990183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A circulatory process that occurs at the level of the lymphatic vasculature.","definition_xrefs":["PMID:21576390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphatic vascular process in circulatory system","termid":"GO:1990183"}


id: PBO:0054913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2327","termid":"PBO:0054913"}


id: PBO:0087348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sphingolipid alpha-hydroxylase; functions in the alpha-hydroxylation of sphingolipid-associated very long chain fatty acids, has both cytochrome b5-like and hydroxylase/desaturase domains, not essential for growth","termid":"PBO:0087348"}


id: PBO:0051228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-22-1 (pseudogene)","termid":"PBO:0051228"}


id: PBO:0028746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_tyrosine_phosphorylation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028746"}


id: GO:0006738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinamide riboside metabolic process","termid":"GO:0046495"},{"relation_name":"is_a","term_name":"pyridine nucleoside catabolic process","termid":"GO:0070638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nicotinamide riboside catabolic process","synonyms":[{"name":"N-ribosylnicotinamide catabolic process","type":"exact"},{"name":"nicotinamide riboside breakdown","type":"exact"},{"name":"nicotinamide riboside catabolism","type":"exact"},{"name":"nicotinamide riboside degradation","type":"exact"}],"termid":"GO:0006738"}


id: PBO:0012242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 6 subunit Pre5 (predicted)","termid":"PBO:0012242"}


id: GO:0044562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant negative regulation of the activity of a voltage-gated potassium channel in the bitten/stung organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of voltage-gated potassium channel activity in another organism","termid":"GO:0044559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of voltage-gated potassium channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of voltage-gated potassium channel activity in other organism","type":"exact"}],"termid":"GO:0044562"}


id: PBO:0063453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 10A","termid":"PBO:0063453"}


id: GO:0071681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an indole-3-methanol stimulus.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to indole-3-methanol","termid":"GO:0071680"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to indole-3-methanol","synonyms":[{"name":"cellular response to indole-3-carbinol","type":"exact"}],"termid":"GO:0071681"}


id: PR:G2TRP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30B4.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30B4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.09","synonyms":[{"name":"Spom972h-SPBC30B4.09","type":"exact"}],"termid":"PR:G2TRP1"}


id: PBO:0003118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein (predicted)","termid":"PBO:0003118"}


id: PBO:0069020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 264, pseudogene","termid":"PBO:0069020"}


id: GO:0015821
data:
  {"annotated_genes":["SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89423],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"The directed movement of methionine, 2-amino-4-(methylthio)butanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transport","termid":"GO:0000101"},{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"methionine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-methionine transport","type":"narrow"}],"termid":"GO:0015821","terms_by_termid":{"GO:1905626":null}}


id: GO:1904553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemotaxis to arachidonic acid.","definition_xrefs":["GO_REF:0000058","PMID:16382163","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of chemotaxis to arachidonic acid","termid":"GO:1904552"},{"relation_name":"negatively_regulates","term_name":"chemotaxis to arachidonic acid","termid":"GO:0034670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemotaxis to arachidonic acid","synonyms":[{"name":"down regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"down-regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"downregulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"inhibition of chemotaxis to arachidonic acid","type":"narrow"}],"termid":"GO:1904553"}


id: GO:0060783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane Smoothened-type protein in the mesenchymal cells of the prostate that contribute to the progression of the prostate over time. This process contributes to lung development.","definition_xrefs":["PMID:12221011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"epithelial-mesenchymal signaling involved in prostate gland development","termid":"GO:0060738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal smoothened signaling pathway involved in prostate gland development","synonyms":[{"name":"mesenchymal hedgehog signaling pathway involved in prostate gland development","type":"exact"},{"name":"mesenchymal hh signaling pathway involved in prostate gland development","type":"exact"},{"name":"mesenchymal smoothened signalling pathway involved in prostate gland development","type":"exact"}],"termid":"GO:0060783"}


id: FYPO:0003193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:23051734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal rate of microtubule depolymerization during vegetative growth","synonyms":[{"name":"normal microtubule depolymerization rate","type":"exact"},{"name":"normal rate of microtubule catastrophe","type":"related"},{"name":"normal rate of microtubule depolymerisation","type":"exact"},{"name":"normal rate of microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"normal rate of microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"normal rate of microtubule shrinkage","type":"related"}],"termid":"FYPO:0003193"}


id: PBO:0059584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioadenosine phosphorylase pseudogene 1","termid":"PBO:0059584"}


id: GO:0006052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of N-acetylmannosamine, the acetylated derivative of mannosamine, 2-amino-2-deoxymannose.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylmannosamine metabolic process","termid":"GO:0006051"},{"relation_name":"is_a","term_name":"mannosamine biosynthetic process","termid":"GO:0046347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylmannosamine biosynthetic process","synonyms":[{"name":"N-acetylmannosamine anabolism","type":"exact"},{"name":"N-acetylmannosamine biosynthesis","type":"exact"},{"name":"N-acetylmannosamine formation","type":"exact"},{"name":"N-acetylmannosamine synthesis","type":"exact"}],"termid":"GO:0006052"}


id: PBO:0003149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-AN1 type zinc finger protein","termid":"PBO:0003149"}


id: PBO:0039279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 8, pseudogene","termid":"PBO:0039279"}


id: PBO:0086478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; IAI11 has a paralog, YER093C-A, that arose from the whole genome duplication","termid":"PBO:0086478"}


id: GO:1901834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of deadenylation-independent decapping of nuclear-transcribed mRNA.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"regulates","term_name":"deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"GO:0031087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"regulation of deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"regulation of deadenylylation-independent decapping","type":"exact"}],"termid":"GO:1901834"}


id: PBO:0046058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit I","termid":"PBO:0046058"}


id: GO:0006292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The location of pyrimidine dimers by a large multienzyme complex that scans the DNA for distortions in the double helix caused by pyrimidine dimers.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrimidine-dimer repair, DNA damage recognition (obsolete GO:0006292)","synonyms":[{"name":"pyrimidine-dimer repair, DNA damage recognition","type":"exact"}],"termid":"GO:0006292"}


id: PBO:0068035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 340","termid":"PBO:0068035"}


id: GO:0033080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of an immature T cell population by cell division in the thymus.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immature T cell proliferation","termid":"GO:0033079"},{"relation_name":"part_of","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immature T cell proliferation in thymus","synonyms":[{"name":"thymic T cell proliferation","type":"exact"},{"name":"thymocyte cell proliferation","type":"exact"},{"name":"thymocyte proliferation","type":"exact"}],"termid":"GO:0033080"}


id: GO:2001136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endocytic recycling.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of endocytic recycling","termid":"GO:2001135"},{"relation_name":"negatively_regulates","term_name":"endocytic recycling","termid":"GO:0032456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"negative regulation of endocytic recycling","synonyms":[{"name":"negative regulation of retrograde transport of endocytic vesicles","type":"related"}],"termid":"GO:2001136"}


id: PBO:0030174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spheroid_vegetative_cell","termid":"PBO:0030174"}


id: SO:0001378
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_taurinomethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_taurinomethyluridine","secondary_identifiers":["RNAMOD:098"],"synonyms":[{"name":"5-taurinomethyluridine","type":"exact"},{"name":"five taurinomethyluridine","type":"exact"},{"name":"tm5U","type":"exact"}],"termid":"SO:0001378"}


id: GO:0052223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of a specific chemical on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative chemotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052223)","synonyms":[{"name":"negative chemotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative chemotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052223"}


id: SO:0001374
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carboxymethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carboxymethyluridine","secondary_identifiers":["RNAMOD:087"],"synonyms":[{"name":"5-carboxymethyluridine","type":"exact"},{"name":"cm5U","type":"exact"},{"name":"five carboxymethyluridine","type":"exact"}],"termid":"SO:0001374"}


id: PBO:0087314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small subunit of the clathrin-associated adaptor complex AP-2; AP-2 is involved in protein sorting at the plasma membrane; related to the sigma subunit of the mammalian plasma membrane clathrin-associated protein (AP-2) complex","termid":"PBO:0087314"}


id: PBO:0013446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase complex subunit Erf4","termid":"PBO:0013446"}


id: PR:O59719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrn6 gene.","definition_xrefs":["UniProtKB:O59719","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3B8.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.11","synonyms":[{"name":"Spom972h-rrn6","type":"exact"}],"termid":"PR:O59719"}


id: PBO:0069485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 752, pseudogene","termid":"PBO:0069485"}


id: PBO:0069936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1229, pseudogene","termid":"PBO:0069936"}


id: PBO:0072519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 48","termid":"PBO:0072519"}


id: PBO:0003333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component beta 7 (predicted)","termid":"PBO:0003333"}


id: PBO:0061193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronatin","termid":"PBO:0061193"}


id: GO:0030125
data:
  {"annotated_genes":["SJAG_04565","SJAG_04609","SJAG_01167","SJAG_00800","SJAG_04517","SJAG_02805","SJAG_02282","SJAG_04644","SJAG_00379","SJAG_00104","SJAG_01809","SJAG_02177"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110966,114555],"is_not":false,"summary":null,"term":"GO:0030125"},{"annotations":[97225,108874,109092,114935],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[107680,92369,104423,107739],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[108996,90993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030130"}]},"cv_name":"cellular_component","definition":"A clathrin coat found on a vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coat","termid":"GO:0030118"},{"relation_name":"is_a","term_name":"vesicle coat","termid":"GO:0030120"},{"relation_name":"part_of","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02805":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04644":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"clathrin vesicle coat","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030125","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030130":null}}


id: PBO:0003640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic forkhead transcription factor Mei4","termid":"PBO:0003640"}


id: FYPO:0003009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere outer repeat regions of a chromosome is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"increased protein localization to chromosome during vegetative growth","termid":"FYPO:0002840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to centromere outer repeat","synonyms":[{"name":"increased protein localisation to centromere outer repeat","type":"exact"},{"name":"increased protein localisation to centromeric outer repeat region","type":"exact"},{"name":"increased protein localization to centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased protein localization to centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased protein localization to chromosome, centric outer repeat region","type":"exact"},{"name":"increased protein localization to chromosome, centromeric outer repeat region","type":"exact"},{"name":"increased protein localization to pericentric region","type":"related"},{"name":"increased protein localization to pericentromeric region","type":"related"}],"termid":"FYPO:0003009"}


id: PBO:0032694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_sister_chromatid_separation_during_interphase","termid":"PBO:0032694"}


id: PBO:0062997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 3","termid":"PBO:0062997"}


id: GO:0140944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl20-[histone H4] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl20-[histone H4] + S-adenosyl-L-homocysteine. This reaction is the addition of a methyl group to the unmethylated lysine residue at position 20 of histone H4, producing histone H4K20me.","definition_xrefs":["RHEA:60344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K20 methyltransferase activity","termid":"GO:0042799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016741","GO:0003824","GO:0008276","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"histone H4K20 monomethyltransferase activity","secondary_identifiers":["EC:2.1.1.361"],"synonyms":[{"name":"histone H4-K20 methylation","type":"broad"},{"name":"histone H4K20 methylase activity","type":"broad"},{"name":"histone H4K20 methylation","type":"broad"},{"name":"histone H4K20 monomethylation","type":"exact"},{"name":"histone lysine N-monomethyltransferase activity (H4-K20 specific)","type":"exact"}],"termid":"GO:0140944"}


id: PBO:0029238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitosis_with_unreplicated_DNA","termid":"PBO:0029238"}


id: PBO:0000652
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.22.-","termid":"PBO:0000652"}


id: RO:0002559
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_material_entities","termid":"RO:0002506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_influenced_by","termid":"RO:0002559"}


id: PBO:0042103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 175","termid":"PBO:0042103"}


id: GO:0061585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of orexin from a cell in which orexin acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion, neurotransmission","termid":"GO:0061544"},{"relation_name":"is_a","term_name":"orexin secretion","termid":"GO:0061584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"orexin secretion, neurotransmission","synonyms":[{"name":"hypocretin secretion, neurotransmission","type":"exact"}],"termid":"GO:0061585"}


id: PR:O43007
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade9 gene.","definition_xrefs":["UniProtKB:O43007","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.08","synonyms":[{"name":"C1-THF synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade9","type":"exact"}],"termid":"PR:O43007"}


id: GO:0035674
data:
  {"annotated_genes":["SJAG_01872","SJAG_00275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87879,108359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006843"}]},"cv_name":"biological_process","definition":"The process in which a tricarboxylic acid is transported across a membrane.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"tricarboxylic acid transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tricarboxylic acid membrane transport","type":"exact"}],"termid":"GO:0035674","terms_by_termid":{"GO:0006843":null}}


id: GO:0018321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein by amino acid glucuronylation, the addition of a glucuronate group, the uronic acid derived from glucose.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein glucuronylation","synonyms":[{"name":"protein amino acid glucuronylation","type":"exact"}],"termid":"GO:0018321"}


id: PBO:0078065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 55 (pseudogene)","termid":"PBO:0078065"}


id: GO:0046241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of m-xylene, 1,3-dimethylbenzene, a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete m-xylene biosynthetic process (obsolete GO:0046241)","synonyms":[{"name":"m-xylene anabolism","type":"exact"},{"name":"m-xylene biosynthesis","type":"exact"},{"name":"m-xylene biosynthetic process","type":"exact"},{"name":"m-xylene formation","type":"exact"},{"name":"m-xylene synthesis","type":"exact"},{"name":"meta-xylene biosynthesis","type":"exact"},{"name":"meta-xylene biosynthetic process","type":"exact"}],"termid":"GO:0046241"}


id: PBO:0070828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 7","termid":"PBO:0070828"}


id: PBO:0081766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 697","termid":"PBO:0081766"}


id: GO:0045738
data:
  {"annotated_genes":["SJAG_03048","SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[107851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA repair.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA repair","termid":"GO:0006282"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"negatively_regulates","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA repair","type":"exact"},{"name":"down-regulation of DNA repair","type":"exact"},{"name":"downregulation of DNA repair","type":"exact"},{"name":"inhibition of DNA repair","type":"narrow"}],"termid":"GO:0045738","terms_by_termid":{"GO:1904332":null,"GO:2001033":null}}


id: GO:1901462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to formic acid.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to formic acid","termid":"GO:1901460"},{"relation_name":"positively_regulates","term_name":"response to formic acid","termid":"GO:1901425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to formic acid","synonyms":[{"name":"activation of response to formic acid","type":"narrow"},{"name":"up regulation of response to formic acid","type":"exact"},{"name":"up-regulation of response to formic acid","type":"exact"},{"name":"upregulation of response to formic acid","type":"exact"}],"termid":"GO:1901462"}


id: PBO:0001425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp11 (predicted)","termid":"PBO:0001425"}


id: PBO:0052950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase suppressor of ras 1 pseudogene 1","termid":"PBO:0052950"}


id: GO:0046297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2,4-dichlorobenzoate, a chlorinated aromatic compound which is a key intermediate in the aerobic degradation of polychlorinated biphenyls (PCBs).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4-dichlorobenzoate biosynthetic process (obsolete GO:0046297)","synonyms":[{"name":"2,4-dichlorobenzoate anabolism","type":"exact"},{"name":"2,4-dichlorobenzoate biosynthesis","type":"exact"},{"name":"2,4-dichlorobenzoate biosynthetic process","type":"exact"},{"name":"2,4-dichlorobenzoate formation","type":"exact"},{"name":"2,4-dichlorobenzoate synthesis","type":"exact"}],"termid":"GO:0046297"}


id: PBO:0088883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [4Fe-4S] cluster transfer protein Fra3","termid":"PBO:0088883"}


id: PBO:0055807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylcholine acyltransferase 2b, pseudogene","termid":"PBO:0055807"}


id: PBO:0075187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide F pseudogene 4","termid":"PBO:0075187"}


id: FYPO:0004583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic chromosome condensation is abnormal.","definition_xrefs":["PomBase:mah","PMID:23263988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome condensation","termid":"FYPO:0000159"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic chromosome condensation","synonyms":[{"name":"abnormal chromosome condensation during meiosis I","type":"exact"},{"name":"abnormal chromosome condensation during meiotic cell cycle","type":"related"}],"termid":"FYPO:0004583"}


id: PBO:0035888
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-Mei2_nuclear_dot_present_in_cell_during_vegetative_growth","termid":"PBO:0035888"}


id: GO:0062158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(out) + proton(in) = chloride(in) + proton(out).","definition_xrefs":["PMID:14985752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"chloride:proton antiporter activity","termid":"GO:0062158"}


id: PBO:0084928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein expressed during iron starvation; binds to a sequence element in the 3'-untranslated regions of specific mRNAs to mediate their degradation; involved in iron homeostasis; protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress; TIS11 has a paralog, CTH1, that arose from the whole genome duplication","termid":"PBO:0084928"}


id: PBO:0089674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein","termid":"PBO:0089674"}


id: PBO:0045041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 1","termid":"PBO:0045041"}


id: PBO:0062748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily J member 3","termid":"PBO:0062748"}


id: PBO:0078055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 45","termid":"PBO:0078055"}


id: PBO:0076541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription activation suppressor","termid":"PBO:0076541"}


id: SO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that increases the rate of transcription with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rate_of_transcription_variant","termid":"SO:0001550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_transcription_rate_variant","synonyms":[{"name":"increased transcription rate variant","type":"exact"}],"termid":"SO:0001551"}


id: PBO:0068831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 69, pseudogene","termid":"PBO:0068831"}


id: GO:0019265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycine by the transamination of glyoxylate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine biosynthetic process","termid":"GO:0006545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycine biosynthetic process, by transamination of glyoxylate","synonyms":[{"name":"glycine anabolism, by transamination of glyoxylate","type":"exact"},{"name":"glycine formation, by transamination of glyoxylate","type":"exact"},{"name":"glycine synthesis, by transamination of glyoxylate","type":"exact"}],"termid":"GO:0019265"}


id: PBO:0048107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"far upstream element binding protein 3","termid":"PBO:0048107"}


id: PBO:0059255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L21","termid":"PBO:0059255"}


id: PBO:0051996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junction adhesion molecule like","termid":"PBO:0051996"}


id: PBO:0062971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 3","termid":"PBO:0062971"}


id: PBO:0062558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 5","termid":"PBO:0062558"}


id: PBO:0030528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0030528"}


id: GO:0015687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which ferric-hydroxamate, the iron-bound form of the iron chelator hydroxamate, is transported into the cell by specific cell surface receptors.","definition_xrefs":["GOC:pg","PMID:23192658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore-dependent iron import into cell","termid":"GO:0033214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0098771"],"is_obsolete":false,"name":"ferric-hydroxamate import into cell","synonyms":[{"name":"ferric-hydroxamate transport","type":"broad"}],"termid":"GO:0015687"}


id: PBO:0078460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable A (pseudogene)","termid":"PBO:0078460"}


id: GO:0042412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats.","definition_xrefs":["ISBN:0198600461","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taurine metabolic process","termid":"GO:0019530"},{"relation_name":"is_a","term_name":"alkanesulfonate biosynthetic process","termid":"GO:0046305"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"taurine biosynthetic process","synonyms":[{"name":"taurine anabolism","type":"exact"},{"name":"taurine biosynthesis","type":"exact"},{"name":"taurine formation","type":"exact"},{"name":"taurine synthesis","type":"exact"}],"termid":"GO:0042412"}


id: GO:1903549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of growth hormone activity.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:3068266","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of receptor binding","termid":"GO:1900122"},{"relation_name":"is_a","term_name":"regulation of growth hormone activity","termid":"GO:1903547"},{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of growth hormone activity","synonyms":[{"name":"activation of GH activity","type":"narrow"},{"name":"activation of growth hormone activity","type":"narrow"},{"name":"activation of pituitary growth hormone activity","type":"narrow"},{"name":"activation of placental growth hormone activity","type":"narrow"},{"name":"positive regulation of GH activity","type":"exact"},{"name":"positive regulation of pituitary growth hormone activity","type":"narrow"},{"name":"positive regulation of placental growth hormone activity","type":"narrow"},{"name":"up regulation of GH activity","type":"exact"},{"name":"up regulation of growth hormone activity","type":"exact"},{"name":"up regulation of pituitary growth hormone activity","type":"narrow"},{"name":"up regulation of placental growth hormone activity","type":"narrow"},{"name":"up-regulation of GH activity","type":"exact"},{"name":"up-regulation of growth hormone activity","type":"exact"},{"name":"up-regulation of pituitary growth hormone activity","type":"narrow"},{"name":"up-regulation of placental growth hormone activity","type":"narrow"},{"name":"upregulation of GH activity","type":"exact"},{"name":"upregulation of growth hormone activity","type":"exact"},{"name":"upregulation of pituitary growth hormone activity","type":"narrow"},{"name":"upregulation of placental growth hormone activity","type":"narrow"}],"termid":"GO:1903549"}


id: FYPO:0005990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is localized to the cell cortex of the cell tip during karyogamy involved in conjugation with cellular fusion, but does not remain there continuously.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during mating","termid":"FYPO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal maintenance of protein location in cell cortex of cell tip during karyogamy","synonyms":[{"name":"abnormal maintenance of protein localization in cell cortex of cell tip during karyogamy","type":"exact"},{"name":"abnormal maintenance of protein location in cell cortex of cell tip during karyogamy involved in conjugation with cellular fusion","type":"exact"},{"name":"abnormal maintenance of protein location in cell cortex of cell tip during nuclear fusion during mating","type":"exact"},{"name":"unstable protein localisation to cell cortex of cell tip during karyogamy","type":"exact"},{"name":"unstable protein localization to cell cortex of cell tip during karyogamy","type":"exact"}],"termid":"FYPO:0005990"}


id: PATO:0000404
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being curled or wound (especially in concentric rings or spirals).","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coiling","termid":"PATO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled","secondary_identifiers":["PATO:0001363"],"synonyms":[{"name":"helical","type":"related"},{"name":"helicoid","type":"related"},{"name":"helicoidal","type":"related"},{"name":"helix-shaped","type":"related"},{"name":"spiral","type":"exact"}],"termid":"PATO:0000404"}


id: MOD:01866
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6-amino hydrogen atom of a lysine residue with the Applied Biosystems mTRAQ light reporter+balance group.","definition_xrefs":["OMSSA:209","Unimod:888#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mTRAQ light reporter+balance reagent acylated residue","termid":"MOD:01864"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"mTRAQ light reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"mTRAQ light","type":"related"},{"name":"mTRAQ light on K","type":"exact"}],"termid":"MOD:01866"}


id: GO:1901763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of oxytetracycline.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00926","PMID:8163168","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"oxytetracycline metabolic process","termid":"GO:1901761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"oxytetracycline biosynthetic process","synonyms":[{"name":"oxytetracycline formation","type":"exact"},{"name":"oxytetracycline synthesis","type":"exact"},{"name":"oxytetracycline anabolism","type":"exact"},{"name":"oxytetracycline biosynthesis","type":"exact"}],"termid":"GO:1901763"}


id: PBO:0040993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2 pseudogene 3","termid":"PBO:0040993"}


id: PATO:0000177
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000177 physiological function (obsolete PATO:0000177)","termid":"PATO:0000177"}


id: PBO:0028163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATP_binding","termid":"PBO:0028163"}


id: GO:0010072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the meristem which will give rise to all post-embryonic above-ground structures of the plant as well as the non-root below-ground structures, such as rhizomes and tubers.","definition_xrefs":["GOC:tair_curators","GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"embryonic meristem initiation","termid":"GO:0090421"},{"relation_name":"part_of","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"part_of","term_name":"embryonic meristem development","termid":"GO:0048508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary shoot apical meristem specification","synonyms":[{"name":"embryo shoot apical meristem specification","type":"exact"}],"termid":"GO:0010072"}


id: PBO:0077710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin T3, fast skeletal type","termid":"PBO:0077710"}


id: GO:0102013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + L-glutamate(out) -> ADP + phosphate + L-glutamate(in).","definition_xrefs":["RHEA:29035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled polar amino acid-transporter activity","termid":"GO:0015426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled L-glutamate tranmembrane transporter activity","secondary_identifiers":["MetaCyc:ABC-13-RXN"],"synonyms":[{"name":"L-glutamate-importing ATPase activity","type":"related"}],"termid":"GO:0102013"}


id: PBO:0087128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein; involved in the cleavage step of mRNA 3'-end formation prior to polyadenylation, and in snoRNA maturation; part of holo-CPF subcomplex APT, which associates with 3'-ends of snoRNA- and mRNA-encoding genes; putative regulatory subunit of type 1 protein phosphatase Glc7p, required for actomyosin ring formation, and for timely dephosphorylation and release of Bnr1p from the division site; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087128"}


id: PBO:0082370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) iron-sensing transcription factor; senses high-iron conditions via two Fe/S clusters bound to its activator domain; involved in diauxic shift; YAP5 has a paralog, YAP7, that arose from the whole genome duplication","termid":"PBO:0082370"}


id: PBO:0088263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIF complex alpha subunit Tfg1","termid":"PBO:0088263"}


id: PBO:0071527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 30","termid":"PBO:0071527"}


id: GO:0160056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a macropinosome.","definition_xrefs":["PMID:19690049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"macropinosome","termid":"GO:0044354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005768","GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"macropinosome membrane","termid":"GO:0160056"}


id: GO:1902599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sulfathiazole across a membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000069","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"azole transmembrane transport","termid":"GO:0045117"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sulfathiazole transmembrane transport","secondary_identifiers":["GO:0015906"],"synonyms":[{"name":"sulfathiazole transport","type":"broad"},{"name":"sulphathiazole transport","type":"broad"}],"termid":"GO:1902599"}


id: GO:1905191
data:
  {"annotated_genes":["SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91262],"is_not":false,"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metaphase/anaphase transition of meiosis II.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21389117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902104"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiosis II","termid":"GO:1905189"},{"relation_name":"positively_regulates","term_name":"metaphase/anaphase transition of meiosis II","termid":"GO:1990950"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of metaphase/anaphase transition of meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of meiosis II metaphase/anaphase transition","type":"exact"}],"termid":"GO:1905191","terms_by_termid":{"GO:1905191":null}}


id: GO:0047269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: poly(ribitol phosphate) + UDP-N-acetyl-D-glucosamine = N-acetyl-D-glucosaminyl-poly(ribitol phosphate) + UDP.","definition_xrefs":["MetaCyc:2.4.1.70-RXN","EC:2.4.1.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"poly(ribitol-phosphate) N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.53-RXN","RHEA:21012"],"synonyms":[{"name":"UDP acetylglucosamine-poly(ribitol phosphate) acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:poly(ribitol-phosphate) N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-poly(ribitol phosphate) acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0047269"}


id: GO:0034253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of amides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"regulation of amide catabolic process","termid":"GO:0034251"},{"relation_name":"positively_regulates","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amide catabolic process","synonyms":[{"name":"positive regulation of amide breakdown","type":"exact"},{"name":"positive regulation of amide catabolism","type":"exact"},{"name":"positive regulation of amide degradation","type":"related"},{"name":"positive regulation of cellular amide catabolic process","type":"exact"}],"termid":"GO:0034253"}


id: PBO:0003759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z15","termid":"PBO:0003759"}


id: PBO:0090741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protoporphyrinogen IX importer","termid":"PBO:0090741"}


id: PBO:0066172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 5","termid":"PBO:0066172"}


id: PBO:0058502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5692c-2","termid":"PBO:0058502"}


id: GO:0075066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont, or the progression of the symbiont from an initial condition to a later condition, occurring in its host's organelle. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont in host organelle (obsolete GO:0075066)","synonyms":[{"name":"growth or development of symbiont in host organelle","type":"exact"}],"termid":"GO:0075066"}


id: PBO:0065880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB30 divergent transcript","termid":"PBO:0065880"}


id: PBO:0058600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6732","termid":"PBO:0058600"}


id: GO:0062070
data:
  {"annotated_genes":["SJAG_01728"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104327],"is_not":false,"summary":null,"term":"GO:0062070"}]},"cv_name":"molecular_function","definition":"Binding to a SAGA complex.","definition_xrefs":["PMID:27185460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"SAGA complex binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062070","terms_by_termid":{"GO:0062070":null}}


id: GO:2000988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemicellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall polysaccharide catabolic process","termid":"GO:2000966"},{"relation_name":"regulates","term_name":"hemicellulose catabolic process","termid":"GO:2000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of hemicellulose catabolic process","synonyms":[{"name":"regulation of hemicellulose catabolism","type":"exact"}],"termid":"GO:2000988"}


id: GO:0099643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any signal release from a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"part_of","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"signal release from synapse","termid":"GO:0099643"}


id: PATO:0002005
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Surface shape that refers to the inward or outward curvature of the surface.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concavity","termid":"PATO:0002005"}


id: GO:0120293
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An aggregation of axonemal dyneins, their specific assembly factors, and broadly-acting chaperones that is located in the cytoplasm.","definition_xrefs":["PMID:30561330","GOC:krc","PMID:32898505","PMID:33263282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"dynein axonemal particle","synonyms":[{"name":"DynAP","type":"related"}],"termid":"GO:0120293"}


id: SO:1000017
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a pyrimidine nucleotide, C or T, into a purine nucleotide, A or G, or vice versa.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNV","termid":"SO:0001483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transversion","secondary_identifiers":["http://en.wikipedia.org/wiki/Transversion"],"termid":"SO:1000017"}


id: FYPO:0003494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to L-azetidine-2-carboxylic acid. Cells stop growing (and may die) at a concentration of L-azetidine-2-carboxylic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to L-azetidine-2-carboxylic acid","synonyms":[{"name":"hypersensitive to L-azetidine-2-carboxylic acid","type":"exact"},{"name":"sensitive to (S)-azetidine-2-carboxylic acid","type":"exact"},{"name":"sensitive to AZC","type":"broad"},{"name":"sensitive to L-azetidine-2-carboxylic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to L-azetidine-2-carboxylic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0003494"}


id: PBO:0070224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 157 pseudogene","termid":"PBO:0070224"}


id: PBO:0073684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 6","termid":"PBO:0073684"}


id: GO:0004510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + tetrahydrobiopterin + O2 = 5-hydroxy-L-tryptophan + 4-alpha-hydroxytetrahydrobiopterin + H2O.","definition_xrefs":["EC:1.14.16.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","termid":"GO:0016714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tryptophan 5-monooxygenase activity","secondary_identifiers":["RHEA:16709","MetaCyc:TRYPTOPHAN-5-MONOOXYGENASE-RXN","Reactome:R-HSA-209828"],"synonyms":[{"name":"L-tryptophan hydroxylase activity","type":"exact"},{"name":"L-tryptophan,tetrahydrobiopterin:oxygen oxidoreductase (5-hydroxylating)","type":"related"},{"name":"indoleacetic acid-5-hydroxylase activity","type":"related"},{"name":"tryptophan 5-hydroxylase activity","type":"related"},{"name":"tryptophan hydroxylase activity","type":"related"}],"termid":"GO:0004510"}


id: PBO:0028883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K36_methylation","termid":"PBO:0028883"}


id: PBO:0056129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYST antisense RNA 1","termid":"PBO:0056129"}


id: PBO:0003451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit Cdc27","termid":"PBO:0003451"}


id: PBO:0061528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutral sphingomyelinase activation associated factor","termid":"PBO:0061528"}


id: PBO:0077536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 248 pseudogene 1","termid":"PBO:0077536"}


id: GO:0032718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-9 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-9 production","termid":"GO:0032678"},{"relation_name":"negatively_regulates","term_name":"interleukin-9 production","termid":"GO:0032638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-9 production","secondary_identifiers":["GO:0045418"],"synonyms":[{"name":"down regulation of interleukin-9 production","type":"exact"},{"name":"down-regulation of interleukin-9 production","type":"exact"},{"name":"downregulation of interleukin-9 production","type":"exact"},{"name":"inhibition of interleukin-9 production","type":"narrow"},{"name":"negative regulation of IL-9 production","type":"exact"},{"name":"negative regulation of interleukin-9 biosynthetic process","type":"narrow"}],"termid":"GO:0032718"}


id: MOD:00841
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with an isothiocyanate compound.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isothiocyanate reagent derivatized residue","termid":"MOD:00841"}


id: PBO:0049417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2G, pseudogene","termid":"PBO:0049417"}


id: FYPO:0003427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which one or more transfer RNA (tRNA) molecules contains fewer queuosine residues than normal.","definition_xrefs":["PomBase:mah","PMID:24911101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"decreased queuosine level in tRNA","synonyms":[{"name":"reduced queuosine content of tRNA","type":"exact"},{"name":"reduced queuosine level in tRNA","type":"exact"}],"termid":"FYPO:0003427"}


id: PBO:0087093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L8A; required for processing of 27SA3 pre-rRNA to 27SB during assembly of large subunit; binds Domain I of 25S, 5.8 S rRNAs; mutation results in decreased amounts of free 60S subunits; RPL8B has paralog RPL8A from whole genome duplication; RPL8A or RPL8B ribosomes not functionally interchangeable; proportions of Rpl8ap, Rpl8bp in 80S ribosome differ in glucose and glycerol; homologous to mammalian ribosomal protein L7A, no bacterial homolog","termid":"PBO:0087093"}


id: PBO:0054170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1543","termid":"PBO:0054170"}


id: PBO:0038991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate lyase","termid":"PBO:0038991"}


id: PBO:0035758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K4_trimethylation_during_vegetative_growth","termid":"PBO:0035758"}


id: PBO:0003600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Msl1 (predicted)","termid":"PBO:0003600"}


id: PBO:0052790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 31","termid":"PBO:0052790"}


id: PBO:0013753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciclin domain protein Fsc1","termid":"PBO:0013753"}


id: PBO:0053185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor cluster member 9","termid":"PBO:0053185"}


id: GO:1904412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac ventricle development.","definition_xrefs":["GO_REF:0000058","PMID:19590510","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"cardiac ventricle development","termid":"GO:0003231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac ventricle development","termid":"GO:1904412"}


id: PBO:0004689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp10 (predicted)","termid":"PBO:0004689"}


id: PBO:0057750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1909","termid":"PBO:0057750"}


id: GO:0043498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell surface binding (obsolete GO:0043498)","synonyms":[{"name":"cell surface binding","type":"exact"}],"termid":"GO:0043498"}


id: PBO:0029358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_dGTP_level","termid":"PBO:0029358"}


id: PBO:0060874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural EGFL like 2","termid":"PBO:0060874"}


id: GO:0070308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a lens fiber cell. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["PMID:7693735","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell fate commitment","synonyms":[{"name":"lens fibre cell fate commitment","type":"exact"}],"termid":"GO:0070308"}


id: GO:0039567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT1 (signal transducer and activator of transcription-1) activity by retaining STAT1 in the cytoplasm, so STAT1 is unable to translocate to the nucleus to activate transcription of its target genes.","definition_xrefs":["PMID:16254375","PMID:14557668","PMID:17287281"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host STAT1 activity by negative regulation of STAT protein import into nucleus (obsolete GO:0039567)","synonyms":[{"name":"cytoplasmic sequestration of STAT1","type":"broad"},{"name":"suppression by virus of host STAT1 activity by cytoplasmic sequestering of STAT1","type":"exact"}],"termid":"GO:0039567"}


id: PBO:0030331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phospholipid_level","termid":"PBO:0030331"}


id: GO:0035787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the progression of the kidney over time, from its formation to the mature organ.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in kidney development","termid":"GO:0035787"}


id: PBO:0077846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin polyglutamylase complex subunit 2","termid":"PBO:0077846"}


id: PBO:0072402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 7","termid":"PBO:0072402"}


id: PBO:0029808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_abnormal_cell_shape,_normal_cell_size","termid":"PBO:0029808"}


id: PBO:0081019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C2HC-type containing 1A","termid":"PBO:0081019"}


id: PBO:0087226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Second-largest subunit of RNA polymerase III; RNA polymerase III is responsible for the transcription of tRNA and 5S RNA genes, and other low molecular weight RNAs","termid":"PBO:0087226"}


id: PBO:0018050
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pcn1 does not bind directly to Cdc6","termid":"PBO:0018050"}


id: PR:Q9P3E7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC750.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3E7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C750.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC750.03c","synonyms":[{"name":"Spom972h-SPAC750.03c","type":"exact"}],"termid":"PR:Q9P3E7"}


id: PBO:0071730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 28","termid":"PBO:0071730"}


id: GO:0060191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipase activity, the hydrolysis of a lipid or phospholipid.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipase activity","termid":"GO:0060191"}


id: GO:0043827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine57/adenosine58 in tRNA + 2 S-adenosyl-L-methionine = 2 H+ + N1-methyladenosine57/N1-methyladenosine58 in tRNA + 2 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:14739239","PMID:20483913","RHEA:41740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0140098","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"tRNA (adenine(57)-N1)/(adenine(58)-N1)-methyltransferase activity","secondary_identifiers":["EC:2.1.1.219"],"synonyms":[{"name":"tRNA (adenine(57)-N(1))/(adenine(58)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine(57)-N1-)/(adenine(58)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine(57)-N1-/adenine(58)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58 N1-) methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58-N(1)-) methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58-N1-) methyltransferase activity","type":"exact"}],"termid":"GO:0043827"}


id: GO:0031494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mating type switching, the conversion of a single-cell organism from one mating type to another by the precise replacement of a DNA sequence at the expressed mating type locus with a copy of a sequence from a donor locus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mating type switching","termid":"GO:0031494"}


id: PBO:0066235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 43","termid":"PBO:0066235"}


id: GO:0045624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043372"},{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"T-helper cell differentiation","termid":"GO:0042093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper cell differentiation","synonyms":[{"name":"activation of T-helper cell differentiation","type":"narrow"},{"name":"positive regulation of T-helper cell development","type":"related"},{"name":"stimulation of T-helper cell differentiation","type":"narrow"},{"name":"up regulation of T-helper cell differentiation","type":"exact"},{"name":"up-regulation of T-helper cell differentiation","type":"exact"},{"name":"upregulation of T-helper cell differentiation","type":"exact"}],"termid":"GO:0045624"}


id: PBO:0018066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine ammonia-lyase Tda1","termid":"PBO:0018066"}


id: PATO:0001069
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001069 relative density (obsolete PATO:0001069)","termid":"PATO:0001069"}


id: PBO:0080409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS37C subunit of ESCRT-I","termid":"PBO:0080409"}


id: PBO:0072952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase cancer associated transcript 8","termid":"PBO:0072952"}


id: PR:O42657
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27D7.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP and coiled-coil domain-containing protein C27D7.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.02c","synonyms":[{"name":"Spom972h-SPAC27D7.02c","type":"exact"}],"termid":"PR:O42657"}


id: GO:0032896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-CoA + AH2 + O2 = palmitoleic acid (16:1delta9) + A + 2 H2O.","definition_xrefs":["PMID:16443825","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"palmitoyl-CoA 9-desaturase activity","synonyms":[{"name":"palmitoyl-CoA delta9-desaturase activity","type":"exact"}],"termid":"GO:0032896"}


id: PBO:0085581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 60S assembly and pre-40S AFs recycling; has sequence similarity to human MybBP1A and weak sequence similarity to B-type DNA polymerases; not required for chromosomal DNA replication","termid":"PBO:0085581"}


id: PBO:0086904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative type-1 protein phosphatase targeting subunit; tethers Glc7p type-1 protein phosphatase to Gsy2p glycogen synthase; PIG2 has a paralog, GIP2, that arose from the whole genome duplication","termid":"PBO:0086904"}


id: GO:0030245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose metabolic process","termid":"GO:0030243"},{"relation_name":"is_a","term_name":"beta-glucan catabolic process","termid":"GO:0051275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cellulose catabolic process","secondary_identifiers":["GO:0016179"],"synonyms":[{"name":"cellulose breakdown","type":"exact"},{"name":"cellulose catabolism","type":"exact"},{"name":"cellulose degradation","type":"exact"}],"termid":"GO:0030245"}


id: FYPO:0003358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to miconazole. Cells stop growing (and may die) at a concentration of miconazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to miconazole","synonyms":[{"name":"hypersensitive to miconazole","type":"exact"},{"name":"sensitive to miconazole during mitotic cell cycle","type":"related"},{"name":"sensitive to miconazole during vegetative growth","type":"exact"},{"name":"sensitivity to chemicals interfering with lipids","type":"broad"}],"termid":"FYPO:0003358"}


id: PBO:0062153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 3 pseudogene","termid":"PBO:0062153"}


id: PBO:0063300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PC-esterase domain containing 1A","termid":"PBO:0063300"}


id: PBO:0073940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC18A2 antisense RNA 1","termid":"PBO:0073940"}


id: MOD:00444
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-palmitoyl-S-(sn-1-2,3-dipalmitoyl-glycerol)cysteine.","definition_xrefs":["Unimod:51","OMSSA:118","PubMed:10356335"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"S-(sn-1-2,3-dipalmitoylglycerol)-L-cysteine","termid":"MOD:01144"},{"relation_name":"is_a","term_name":"N-palmitoyl-S-diacylglycerol-L-cysteine","termid":"MOD:00899"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-palmitoyl-S-(sn-1-2,3-dipalmitoyl-glycerol)cysteine","synonyms":[{"name":"N-acyl diglyceride cysteine","type":"related"},{"name":"Tripalmitate","type":"related"},{"name":"ntermpeptripalmitatec","type":"exact"}],"termid":"MOD:00444"}


id: PBO:0080531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH complex subunit 3","termid":"PBO:0080531"}


id: GO:1904585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a putrescine stimulus.","definition_xrefs":["PMID:20805360","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to putrescine","synonyms":[{"name":"response to 1,4-Butanediamine","type":"exact"},{"name":"response to 1,4-Diaminobutane","type":"exact"},{"name":"response to tetramethylenediamine","type":"exact"}],"termid":"GO:1904585"}


id: PBO:0048685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 4","termid":"PBO:0048685"}


id: PBO:0090051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S12","termid":"PBO:0090051"}


id: PBO:0029964
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_glycerol_carbon_source","termid":"PBO:0029964"}


id: GO:0032293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a non-myelinating glial cell membrane encircles an axon in the central nervous system.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-myelinated axon ensheathment","termid":"GO:0032285"},{"relation_name":"is_a","term_name":"axon ensheathment in central nervous system","termid":"GO:0032291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"non-myelinated axon ensheathment in central nervous system","synonyms":[{"name":"ensheathment of non-myelinated axons in central nervous system","type":"exact"}],"termid":"GO:0032293"}


id: PBO:0073454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFT2 domain containing 3","termid":"PBO:0073454"}


id: PBO:0057628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1203","termid":"PBO:0057628"}


id: GO:0036237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an acyl-glucuronoside + H2O = an alcohol + D-glucuronate.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:22294686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"acyl-glucuronidase activity","synonyms":[{"name":"acyl-glucuronide deglucuronidation activity","type":"narrow"}],"termid":"GO:0036237"}


id: PR:000050523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the dam1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dam1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC589.08c","termid":"PR:000050523"}


id: PBO:0077717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transportin 1 pseudogene 3","termid":"PBO:0077717"}


id: PBO:0057855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3166","termid":"PBO:0057855"}


id: FYPO:0002238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cerulenin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on cerulenin","synonyms":[{"name":"normal cell population growth in presence of cerulenin","type":"exact"},{"name":"normal cell population growth on cerulenin","type":"exact"},{"name":"normal cellular response to cerulenin","type":"related"},{"name":"normal vegetative cell population growth on cerulenin","type":"exact"}],"termid":"FYPO:0002238"}


id: PBO:0042422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 6","termid":"PBO:0042422"}


id: PBO:0045707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysferlin","termid":"PBO:0045707"}


id: GO:0033946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xyloglucan + H2O = xyloglucan oligosaccharides. This reaction is the endohydrolysis of (1->4)-beta-D-glucosidic linkages in xyloglucan.","definition_xrefs":["EC:3.2.1.151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucanase activity","termid":"GO:0052736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"xyloglucan-specific endo-beta-1,4-glucanase activity","secondary_identifiers":["MetaCyc:3.2.1.151-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan glucanohydrolase activity","type":"broad"},{"name":"XEG","type":"related"},{"name":"XH","type":"related"},{"name":"[(1->6)-beta-D-xylo]-(1->4)-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"xyloglucan endo-beta-1,4-glucanase activity","type":"related"},{"name":"xyloglucanase activity","type":"related"},{"name":"xyloglucanendohydrolase activity","type":"related"}],"termid":"GO:0033946"}


id: PBO:0071144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 7","termid":"PBO:0071144"}


id: FYPO:0007860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the spindle pole body (SPB) duplicates normally, and the SPBs separate, in a cell that does not form a mitotic spindle or undergo cytokinesis. The DNA and nucleus may go on to divide in the absence of a spindle, with each DNA mass associated with an SPB.","definition_xrefs":["PomBase:jh","PomBase:mah","PMID:20967237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"},{"relation_name":"part_of","term_name":"nuclear division in absence of mitotic spindle","termid":"FYPO:0007859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000337","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"spindle pole body separation in absence of mitotic spindle","synonyms":[{"name":"SPB separation in absence of mitotic spindle","type":"exact"},{"name":"spindle pole body separation in absence of mitotic spindle during mitotic cell cycle","type":"related"},{"name":"spindle pole body separation in absence of mitotic spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0007860"}


id: FYPO:0000334
data:
  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assayed or wild type"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_04280","SJAG_03596","SJAG_04522","SJAG_01143"],"name":"cellular component organization 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id: PBO:0053449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 397","termid":"PBO:0053449"}


id: PBO:0052959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynurenine aminotransferase 3","termid":"PBO:0052959"}


id: FYPO:0006926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the ratio of the nuclear volume to the total cell volume is greater than normal (the ration observed in wild type is approximately 0.076-0.089).","definition_xrefs":["PomBase:mah","PMID:31015410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased nucleus:cytoplasm ratio","synonyms":[{"name":"increased nuclear:cytoplasmic ratio","type":"exact"},{"name":"increased nuclear:cytoplasmic volume ratio","type":"exact"},{"name":"increased nucleus:cell volume ratio","type":"exact"},{"name":"increased nucleus:cytoplasm ratio during mitotic cell cycle","type":"related"},{"name":"increased nucleus:cytoplasm ratio during vegetative growth","type":"exact"},{"name":"increased nucleus:cytoplasm volume ratio","type":"exact"}],"termid":"FYPO:0006926"}


id: PBO:0028697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_degradation_of_middle_meiotic_gene_mRNA_during_late_meiosis","termid":"PBO:0028697"}


id: PBO:0059498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"msh homeobox 1","termid":"PBO:0059498"}


id: PBO:0028394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_cellular_response_to_osmotic_stress","termid":"PBO:0028394"}


id: PBO:0027074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_vegetative_cell_with_binucleate_and_anucleate_compartments","termid":"PBO:0027074"}


id: GO:0042012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-16 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-16 receptor activity","synonyms":[{"name":"IL-16 receptor activity","type":"exact"},{"name":"IL-16R","type":"exact"}],"termid":"GO:0042012"}


id: PR:O14230
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A farnesyl pyrophosphate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11525:SF0","OMA:SCHPO00542","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl pyrophosphate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.13c","secondary_identifiers":["UniProtKB:O14230"],"synonyms":[{"name":"(2E,6E)-farnesyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Dimethylallyltranstransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FPP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FPS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Geranyltranstransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FDPS","type":"exact"},{"name":"farnesyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14230"}


id: PBO:0074917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 88A","termid":"PBO:0074917"}


id: GO:0010280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucose + NADPH + H+ = UDP-L-rhamnose + NADP+ + H2O.","definition_xrefs":["PMID:14701918","MetaCyc:RXN-5482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"UDP-L-rhamnose synthase activity","synonyms":[{"name":"UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase-4-reductase activity","type":"narrow"}],"termid":"GO:0010280"}


id: GO:0071037
data:
  {"annotated_genes":["SJAG_03984","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88346,109363],"is_not":false,"summary":null,"term":"GO:0071037"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a small nuclear RNA (snRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target snRNA.","definition_xrefs":["GOC:dgf","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA catabolic process","termid":"GO:0016076"},{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03745":null,"SJAG_03984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016073"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent snRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent snRNA catabolic process","type":"related"}],"termid":"GO:0071037","terms_by_termid":{"GO:0071037":null}}


id: GO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of lipid antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002592"},{"relation_name":"regulates","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"regulation of lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002598"}


id: RO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"inheres_in","termid":"RO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"role_of","termid":"RO:0000081"}


id: GO:0019153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 glutathione + protein-disulfide = glutathione disulfide+ protein-dithiol.","definition_xrefs":["RHEA:21064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-disulfide reductase activity","termid":"GO:0015035"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0015036","GO:0140096","GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"protein-disulfide reductase (glutathione) activity","secondary_identifiers":["MetaCyc:PRODISULFREDUCT-RXN","EC:1.8.4.2"],"synonyms":[{"name":"glutaredoxin reductase","type":"related"},{"name":"glutathione-insulin transhydrogenase activity","type":"narrow"},{"name":"insulin reductase activity","type":"narrow"},{"name":"protein disulfide reductase (glutathione)","type":"related"},{"name":"protein disulfide transhydrogenase activity","type":"related"},{"name":"protein-disulphide reductase (glutathione) activity","type":"exact"}],"termid":"GO:0019153"}


id: GO:0007010
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id: GO:0004029
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  {"annotated_genes":["SJAG_02961","SJAG_03786","SJAG_00482"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75137,96968,102906],"is_not":false,"summary":null,"term":"GO:0004029"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + H2O + NAD+ = a carboxylate + 2 H+ + NADH.","definition_xrefs":["RHEA:16185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00482":null,"SJAG_02961":null,"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aldehyde dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.2.1.3","Reactome:R-HSA-5696091","UM-BBD_reactionID:r0023","Reactome:R-HSA-6808487","Reactome:R-HSA-5692261","Reactome:R-HSA-71723","Reactome:R-HSA-71691","UM-BBD_reactionID:r0003","Reactome:R-HSA-6813749","Wikipedia:Aldehyde_dehydrogenase_(NAD+)","MetaCyc:ALDHDEHYDROG-RXN","Reactome:R-HSA-380608","Reactome:R-HSA-6808496","Reactome:R-HSA-389609","UM-BBD_reactionID:r0605"],"synonyms":[{"name":"CoA-independent aldehyde dehydrogenase activity","type":"related"},{"name":"NAD-aldehyde dehydrogenase activity","type":"related"},{"name":"NAD-dependent 4-hydroxynonenal dehydrogenase activity","type":"related"},{"name":"NAD-dependent aldehyde dehydrogenase activity","type":"related"},{"name":"NAD-linked aldehyde dehydrogenase activity","type":"related"},{"name":"aldehyde dehydrogenase (NAD+)","type":"related"},{"name":"aldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"m-methylbenzaldehyde dehydrogenase activity","type":"related"},{"name":"propionaldehyde dehydrogenase activity","type":"related"}],"termid":"GO:0004029","terms_by_termid":{"GO:0004029":null}}


id: GO:2001170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"},{"relation_name":"is_a","term_name":"negative regulation of ATP metabolic process","termid":"GO:1903579"},{"relation_name":"is_a","term_name":"regulation of ATP biosynthetic process","termid":"GO:2001169"},{"relation_name":"negatively_regulates","term_name":"ATP biosynthetic process","termid":"GO:0006754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ATP biosynthetic process","synonyms":[{"name":"negative regulation of ATP anabolism","type":"exact"},{"name":"negative regulation of ATP biosynthesis","type":"exact"},{"name":"negative regulation of ATP formation","type":"exact"},{"name":"negative regulation of ATP regeneration","type":"related"},{"name":"negative regulation of ATP synthesis","type":"exact"}],"termid":"GO:2001170"}


id: PBO:0084658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mismatch repair protein; forms dimers with Msh2p that mediate repair of insertion or deletion mutations and removal of nonhomologous DNA ends, contains a PCNA (Pol30p) binding motif required for genome stability","termid":"PBO:0084658"}


id: MOD:01769
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-palmitoleyl-L-threonine.","definition_xrefs":["PubMed:6642431","OMSSA:188","Unimod:431#T","PubMed:8413602","RESID:AA0079#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoleylated residue","termid":"MOD:01768"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-palmitoleyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-((Z)-9-hexadecenoyloxy)butanoic acid","type":"exact"},{"name":"L-threonine cis-9-hexadecenoate ester","type":"exact"},{"name":"O-palmitoleylated L-threonine","type":"exact"},{"name":"O3-palmitoleyl-threonine","type":"exact"},{"name":"Palmitoleyl","type":"related"},{"name":"mod188","type":"exact"},{"name":"palmitoleyl","type":"related"}],"termid":"MOD:01769"}


id: PBO:0073514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 7","termid":"PBO:0073514"}


id: PBO:0029303
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_wall_morphology","termid":"PBO:0029303"}


id: PBO:0060753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B3 pseudogene 3","termid":"PBO:0060753"}


id: GO:0017020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates of the activity of myosin phosphatase.","definition_xrefs":["PMID:10491107","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase regulator activity","termid":"GO:0019888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"myosin phosphatase regulator activity","synonyms":[{"name":"myosin phosphatase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0017020"}


id: PBO:0048895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 16, pseudogene","termid":"PBO:0048895"}


id: PBO:0063147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAT1 homolog 1, processing body mRNA decay factor","termid":"PBO:0063147"}


id: GO:0080041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-ribose + H2O = AMP + ribose-1-phosphate.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-sugar diphosphatase activity","termid":"GO:0019144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ADP-ribose pyrophosphohydrolase activity","termid":"GO:0080041"}


id: GO:0044759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont organism decreases the frequency, rate or extent of synaptic transmission, communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse, in its host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of host synaptic transmission","termid":"GO:0044758"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation by symbiont of host synaptic transmission","termid":"GO:0044759"}


id: GO:1902441
data:
  {"annotated_genes":["SJAG_02529","SJAG_04901","SJAG_03915"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87398,92980,110033],"is_not":false,"summary":null,"term":"GO:1902441"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a meiotic spindle pole body.","definition_xrefs":["PMID:20833892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle pole body","termid":"GO:0071988"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic spindle pole body organization","termid":"GO:1990395"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02529":null,"SJAG_03915":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0007049","GO:0007010","GO:0051179","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"protein localization to meiotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990954","GO:1990945"],"synonyms":[{"name":"establishment of protein localization to meiotic spindle pole body","type":"narrow"},{"name":"protein localisation in meiotic spindle pole body","type":"exact"},{"name":"protein localisation to meiotic spindle pole body","type":"exact"},{"name":"protein localization in meiotic spindle pole body","type":"exact"},{"name":"protein location to meiotic spindle pole body","type":"exact"}],"termid":"GO:1902441","terms_by_termid":{"GO:1902441":null}}


id: GO:0102144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carboxyspermidine + H2O + NADP = L-aspartic acid 4-semialdehyde betaine + 1,4-butanediammonium + NADPH + H+.","definition_xrefs":["GOC:pz","EC:1.5.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carboxyspermidine dehydrogenase II activity","secondary_identifiers":["RHEA:34111","MetaCyc:RXN-11566"],"termid":"GO:0102144"}


id: PBO:0043722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 1","termid":"PBO:0043722"}


id: GO:0047925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + bicarbonate + geranoyl-CoA = 3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:17701","EC:6.4.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA carboxylase activity","termid":"GO:0016421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"geranoyl-CoA carboxylase activity","secondary_identifiers":["UM-BBD_reactionID:r1166","MetaCyc:GERANOYL-COA-CARBOXYLASE-RXN","KEGG_REACTION:R03494"],"synonyms":[{"name":"geranoyl coenzyme A carboxylase activity","type":"related"},{"name":"geranoyl-CoA:carbon-dioxide ligase (ADP-forming)","type":"related"},{"name":"geranyl-CoA carboxylase activity","type":"related"}],"termid":"GO:0047925"}


id: GO:2001220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of G2 phase of mitotic cell cycle.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G2 phase of mitotic cell cycle (obsolete GO:2001220)","synonyms":[{"name":"negative regulation of G2 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:2001220"}


id: GO:0048555
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of the generative cell, a cell contained within the pollen grain that will divide to produce two haploid sperm cells.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"generative cell nucleus","synonyms":[{"name":"male germ cell nucleus","type":"broad"},{"name":"sperm cell nucleus","type":"broad"}],"termid":"GO:0048555"}


id: PBO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repressor of RNA polymerase III Maf1","termid":"PBO:0001836"}


id: PBO:0091200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala","termid":"PBO:0091200"}


id: FYPO:0003475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arsenate reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abnormal arsenate reductase activity","termid":"FYPO:0003475"}


id: PBO:0084001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerol dehydrogenase; involved in an alternative pathway for glycerol catabolism used under microaerobic conditions; also has mRNA binding activity; member of the aldo-keto reductase (AKR) family; human homolog AKR1B1 can complement yeast null mutant; protein abundance increases in response to DNA replication stress; GCY1 has a paralog, YPR1, that arose from the whole genome duplication","termid":"PBO:0084001"}


id: PBO:0111878
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octicosapeptide repeat","termid":"PBO:0111878"}


id: PBO:0066474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase pseudogene 1","termid":"PBO:0066474"}


id: PBO:0108838
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. japonicus mid1","termid":"PBO:0108838"}


id: PBO:0074891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 66","termid":"PBO:0074891"}


id: MOD:00294
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, an L-histidine residues, an L-serine residue and a four-iron four-sulfur cluster to bis-L-cysteinyl L-N3'-histidino L-serinyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis-L-cysteinyl L-N3'-histidino L-serinyl tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"METAL Iron-sulfur (4Fe-4S); via pros nitrogen","type":"exact"},{"name":"bis-L-cysteinyl L-N3'-histidino L-serinyl tetrairon tetrasulfide","type":"exact"},{"name":"tetra-mu3-sulfidobis(S-cysteinyliron)(N3'-histidinoiron)(O3-serinyliron)","type":"exact"}],"termid":"MOD:00294"}


id: PBO:0046803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor VIII associated 1","termid":"PBO:0046803"}


id: MOD:00911
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-leucine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-leucine residue","synonyms":[{"name":"ModLeu","type":"exact"}],"termid":"MOD:00911"}


id: GO:0051783
data:
  {"annotated_genes":["SJAG_02451","SJAG_04573","SJAG_00266","SJAG_04968","SJAG_01680","SJAG_04126","SJAG_03681","SJAG_00666","SJAG_02380","SJAG_03048","SJAG_03438","SJAG_03327","SJAG_04287","SJAG_02058","SJAG_04699","SJAG_01837","SJAG_03529","SJAG_01330","SJAG_00364","SJAG_02712","SJAG_04999","SJAG_04884","SJAG_03353","SJAG_04259","SJAG_00883","SJAG_01805","SJAG_01679","SJAG_02498","SJAG_01297","SJAG_02169","SJAG_01082","SJAG_02336","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[86834,104345,110359,95685,103323,109879,108051,111987,99995],"is_not":false,"rel_names":["is_a","negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[102396,110585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[110349,85184,76901,112151,102701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[111636,112765,95533,86836,109883,110588,102398,97895,106000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[111637,102399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[90303],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[104062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[109884],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[112769],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[96237,110857,93806,110360,89906,98483,107463,98208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[85186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[97432],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[93047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0040020"},{"annotations":[90304],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:0090266"},{"annotations":[107015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007088"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"nuclear division","termid":"GO:0000280"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02058":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02712":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03438":null,"SJAG_03529":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04287":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nuclear division","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0051783","terms_by_termid":{"GO:0007088":null,"GO:0007094":null,"GO:0010845":null,"GO:0010846":null,"GO:0040020":null,"GO:0045128":null,"GO:0045841":null,"GO:0045842":null,"GO:0051598":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PATO:0001354
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A optical quality inhering in a bearer by virtue of the bearer's exhibiting low opacity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opacity","termid":"PATO:0000957"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translucent","termid":"PATO:0001354"}


id: PBO:0027218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cytosolic_half-mer_polysome_level","termid":"PBO:0027218"}


id: GO:0033481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galacturonate, the anion of galacturonic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonate metabolic process","termid":"GO:0019586"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galacturonate biosynthetic process","synonyms":[{"name":"galacturonate anabolism","type":"exact"},{"name":"galacturonate biosynthesis","type":"exact"},{"name":"galacturonate formation","type":"exact"},{"name":"galacturonate synthesis","type":"exact"}],"termid":"GO:0033481"}


id: PBO:0055417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2847","termid":"PBO:0055417"}


id: PBO:0090216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Sec31","termid":"PBO:0090216"}


id: GO:0106355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ + NADH + O2 = 3,4-dihydroxybenzoate + H2O + NAD+.","definition_xrefs":["RHEA:19473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity","termid":"GO:0018671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase (NADH) activity","termid":"GO:0106355"}


id: FYPO:0004182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing papuamide B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0000257"],"is_obsolete":false,"name":"normal vegetative growth on papuamide B","synonyms":[{"name":"normal cellular response to papuamide B during vegetative growth","type":"related"},{"name":"normal vegetative cell population growth in presence of papuamide B","type":"exact"},{"name":"normal vegetative cell population growth on papuamide B","type":"exact"},{"name":"normal vegetative growth on papuamide B during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004182"}


id: GO:0032166
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Arrays of septin filaments, or bars, found in a series of filamentous structures. Observed in the chlamydospore membrane during chlamydospore formation.","definition_xrefs":["PMID:16151244","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin filament array","termid":"GO:0032160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"chlamydospore septin filament array","termid":"GO:0032166"}


id: PBO:0044050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSRP2 pseudogene 1","termid":"PBO:0044050"}


id: GO:0006728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pteridine, pyrazino(2,3-dipyrimidine), the parent structure of pterins and the pteroyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine metabolic process","termid":"GO:0019889"},{"relation_name":"is_a","term_name":"pteridine-containing compound biosynthetic process","termid":"GO:0042559"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0042559","GO:0008150"],"is_obsolete":false,"name":"pteridine biosynthetic process","synonyms":[{"name":"pteridine anabolism","type":"exact"},{"name":"pteridine biosynthesis","type":"exact"},{"name":"pteridine formation","type":"exact"},{"name":"pteridine synthesis","type":"exact"},{"name":"pterin biosynthesis","type":"narrow"},{"name":"pterin biosynthetic process","type":"narrow"}],"termid":"GO:0006728"}


id: PBO:0030592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_ornithine_level","termid":"PBO:0030592"}


id: PBO:0027231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA_during_stationary_phase","termid":"PBO:0027231"}


id: GO:0044133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of a symbiont within the cells or tissues of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth of symbiont on or near host (obsolete GO:0044133)","termid":"GO:0044133"}


id: PBO:0076305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 2 pseudogene 1","termid":"PBO:0076305"}


id: GO:0031977
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by a thylakoid membrane.","definition_xrefs":["GOC:mah","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"thylakoid","termid":"GO:0009579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"thylakoid lumen","termid":"GO:0031977"}


id: PBO:0028869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_snoRNA_level","termid":"PBO:0028869"}


id: PBO:0070599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 66","termid":"PBO:0070599"}


id: PBO:0027243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polyadenylated_5S_rRNA_level","termid":"PBO:0027243"}


id: PBO:0113017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor (ATF/CREB1 homolog); regulates unfolded protein response via UPRE binding and membrane biogenesis; translation initiation repressed under non-stress conditions by un-spliced intron that interacts with 5'-UTR; under ER stress Ire1p nuclease cleaves out inhibitory intron and triggers efficient Hac1p translation; two functional forms of Hac1p are produced; protein abundance increases in response to DNA replication stress","termid":"PBO:0113017"}


id: FYPO:0003020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the autophosphorylation of one or more specific proteins, or of specific protein sites, does not occur. Protein autophosphorylation is the phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["GO:0031952","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"},{"relation_name":"is_a","term_name":"abnormal protein autophosphorylation during vegetative growth","termid":"FYPO:0003019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein autophosphorylation during vegetative growth","synonyms":[{"name":"abolished protein autophosphorylation during mitotic cell cycle","type":"related"},{"name":"protein autophosphorylation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003020"}


id: PBO:0047634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLT3 interacting zinc finger 1","termid":"PBO:0047634"}


id: PBO:0087337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specificity factor required for Rsp5p-dependent ubiquitination; also required for sorting of cargo proteins at the multivesicular body; identified as a high-copy suppressor of a SHR3 deletion, increasing steady-state levels of amino acid permeases","termid":"PBO:0087337"}


id: PBO:0083709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-membrane protein; subunit of evolutionarily conserved EMC (Endoplasmic Reticulum Membrane Complex) implicated in ERAD (ER-associated degradation) and proper assembly of multi-pass transmembrane (TM) proteins; EMC acts in yeast as an ER-mitochondria tether that interacts with outer membrane protein Tom5 of TOM (Translocase of the Mitochondrial Outer Membrane) complex; suppressor of pma1-7, deletion of SOP4 slows down export of wild-type Pma1p and Pma1-7 from the ER","termid":"PBO:0083709"}


id: GO:0003928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete RAB small monomeric GTPase activity (obsolete GO:0003928)","synonyms":[{"name":"RAB small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003928"}


id: FYPO:0007617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium azide (NaN3). Cells stop growing (and may die) at a concentration of sodium azide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to sodium azide","synonyms":[{"name":"sensitive to NaN3","type":"exact"},{"name":"sensitive to sodium azide during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium azide during vegetative growth","type":"exact"}],"termid":"FYPO:0007617"}


id: GO:1905070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an anterior visceral endoderm cell from one site to another.","definition_xrefs":["PMID:17078044","GOC:TermGenie","GO_REF:0000091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior visceral endoderm cell migration","termid":"GO:1905070"}


id: FYPO:0004610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of prophase of the first meiotic nuclear division is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"},{"relation_name":"is_a","term_name":"increased duration of meiotic cell cycle phase","termid":"FYPO:0002220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of meiotic prophase I","synonyms":[{"name":"long meiotic prophase I","type":"exact"},{"name":"prolonged meiotic prophase I","type":"exact"}],"termid":"FYPO:0004610"}


id: PBO:0056795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"milk fat globule EGF and factor V/VIII domain containing","termid":"PBO:0056795"}


id: PBO:0073150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24B antisense RNA 1","termid":"PBO:0073150"}


id: PBO:0081832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 766","termid":"PBO:0081832"}


id: PBO:0043100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 12","termid":"PBO:0043100"}


id: PBO:0051435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-17 (pseudogene)","termid":"PBO:0051435"}


id: PATO:0002346
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having two connected parts, roughly spherical, of different sizes.","definition_xrefs":["PATOC:MH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snowman-shaped","termid":"PATO:0002346"}


id: GO:1902101
data:
  {"annotated_genes":["SJAG_02451","SJAG_02169","SJAG_01805","SJAG_02498","SJAG_04573","SJAG_00145","SJAG_02380","SJAG_04968","SJAG_03048","SJAG_01297","SJAG_04259","SJAG_02336","SJAG_03353","SJAG_00883","SJAG_00666","SJAG_03681","SJAG_01679","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111987,86834,108051,109879,104345,110359,99995,95685,103323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[90303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[91262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[89906,110857,110360,107463,98208,93806,96237,98483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metaphase/anaphase transition of cell cycle.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902099"},{"relation_name":"positively_regulates","term_name":"metaphase/anaphase transition of cell cycle","termid":"GO:0044784"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of metaphase/anaphase transition of cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of metaphase/anaphase transition of cell cycle","type":"narrow"},{"name":"up regulation of metaphase/anaphase transition of cell cycle","type":"exact"},{"name":"up-regulation of metaphase/anaphase transition of cell cycle","type":"exact"},{"name":"upregulation of metaphase/anaphase transition of cell cycle","type":"exact"}],"termid":"GO:1902101","terms_by_termid":{"GO:0045842":null,"GO:0140499":null,"GO:1902426":null,"GO:1905191":null}}


id: GO:0106286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-caffeate + ATP + CoA = (E)-caffeoyl-CoA + AMP + diphosphate.","definition_xrefs":["PMID:22649270","RHEA:36299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"(E)-caffeate-CoA ligase activity","termid":"GO:0106286"}


id: GO:0062082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class Ib molecule of the HLA-A subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["DOI:10.1002/9780470015902.a0024246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class Ib receptor activity","termid":"GO:0062080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"HLA-E specific inhibitory MHC class Ib receptor activity","termid":"GO:0062082"}


id: GO:1904967
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112775],"is_not":false,"summary":null,"term":"GO:1904967"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw","PMID:21920317","PMID:23770679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051988"},{"relation_name":"is_a","term_name":"repair of kinetochore microtubule attachment defect","termid":"GO:0140274"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"part_of","term_name":"meiotic metaphase I homologous chromosome alignment","termid":"GO:0043060"},{"relation_name":"regulates","term_name":"spindle attachment to meiosis I kinetochore","termid":"GO:0051455"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of spindle attachment to meiosis I kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090699"],"synonyms":[{"name":"correction of merotelic kinetochore attachment, meiosis I","type":"related"},{"name":"regulation of attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"regulation of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"regulation of attachment of spindle microtubules to kinetochore involved in meiosis I","type":"exact"},{"name":"regulation of monopolar attachment","type":"exact"},{"name":"regulation of sister kinetochore mono-orientation","type":"exact"},{"name":"repair of merotelic kinetochore attachment defect, meiosis I","type":"related"}],"termid":"GO:1904967","terms_by_termid":{"GO:1904967":null}}


id: FYPO:0007993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during the first meiotic nuclear division in which the localization of a protein to chromatin at the pericentromeric regions is decreased.","definition_xrefs":["PMID:18716626","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to pericentromeric region during meiosis I","termid":"FYPO:0007993"}


id: PBO:0051164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-47 (pseudogene)","termid":"PBO:0051164"}


id: PBO:0061811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 1 Y-linked","termid":"PBO:0061811"}


id: PBO:0074315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 5","termid":"PBO:0074315"}


id: PBO:0028336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K5,_H4-K8,_H4-K12_and_H4-K16_acetylation_at_centromere_central_core","termid":"PBO:0028336"}


id: GO:0010277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: chlorophyllide a + 2 H+ + 2 NADPH + 2 O2 = chlorophyllide b + 3 H2O + 2 NADP+.","definition_xrefs":["RHEA:30359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"chlorophyllide a oxygenase activity","secondary_identifiers":["GO:0046407","EC:1.14.13.122"],"synonyms":[{"name":"CAO activity","type":"broad"},{"name":"chlorophyll a oxygenation activity","type":"exact"},{"name":"chlorophyll b synthesis activity","type":"exact"},{"name":"chlorophyll-b synthesis activity","type":"related"},{"name":"chlorophyllide a:oxygen 7-oxidoreduction activity","type":"related"},{"name":"chlorophyllide-a oxygenation activity","type":"related"}],"termid":"GO:0010277"}


id: GO:0052872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tocotrienol + O2 + NADPH + H+ = 13'-hydroxy-tocotrienol + NADP+ + H2O .","definition_xrefs":["MetaCyc:RXN-11003"],"gene_count":0,"genotype_count":0,"name":"obsolete tocotrienol omega-hydroxylase activity (obsolete GO:0052872)","synonyms":[{"name":"tocotrienol 13-hydroxylase activity","type":"exact"}],"termid":"GO:0052872"}


id: GO:0007118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth at the tip of a bud, in a cell that reproduces by budding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"budding cell bud growth","termid":"GO:0007117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"budding cell apical bud growth","synonyms":[{"name":"apical bud growth","type":"broad"}],"termid":"GO:0007118"}


id: GO:0019816
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete B cell receptor accessory molecule complex (obsolete GO:0019816)","synonyms":[{"name":"B cell receptor accessory molecule complex","type":"exact"}],"termid":"GO:0019816"}


id: PBO:0086675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RDN5-2; YLR154C-H has a paralog, YLR157C-C, that arose from a segmental duplication","termid":"PBO:0086675"}


id: GO:0018392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP-L-fucose = N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-[alpha-L-fucosyl-(1->3)]-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP + H+.","definition_xrefs":["RHEA:24444","EC:2.4.1.214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-(1->3)-fucosyltransferase activity","termid":"GO:0046920"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016757","GO:0140096","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycoprotein 3-alpha-L-fucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06015","MetaCyc:2.4.1.214-RXN"],"synonyms":[{"name":"GDP-L-Fuc:Asn-linked GlcNAc alpha-1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:Asn-linked GlcNAc alpha1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha-1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-fucose:asparagine-linked N-acetylglucosamine alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"GDP-L-fucose:glycoprotein (L-fucose to asparagine-linked N-acetylglucosamine of 4-N-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}asparagine) 3-alpha-L-fucosyl-transferase activity","type":"related"},{"name":"GDP-L-fucose:glycoprotein (L-fucose to asparagine-linked N-acetylglucosamine of N4-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}asparagine) 3-alpha-L-fucosyl-transferase activity","type":"related"},{"name":"GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fuc-alpha-1->6-GlcNAc)-Asn-peptide) alpha-1->3-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fucalpha1->6-GlcNAc)-Asn-peptide) alpha1->3-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fucalpha1->6GlcNAc)-Asn-peptide) alpha1->3-fucosyltransferase activity","type":"related"}],"termid":"GO:0018392"}


id: FYPO:0006194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is spherical, and undergoes one or two rounds of cell division before all cells die, and some cells lyse.","definition_xrefs":["PMID:12456722","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, abnormal cell shape","termid":"FYPO:0002421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, spherical cell with cell lysis","synonyms":[{"name":"inviable following spore germination, single or double cell division, spherical cell with cell lysis","type":"exact"},{"name":"inviable germinated spore, single or double cell division, spherical cell with cell lysis","type":"exact"},{"name":"lethal after spore germination, single or double cell division, spherical cell with cell lysis","type":"exact"}],"termid":"FYPO:0006194"}


id: SO:0000190
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron that is the most 5-prime in a given transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_intron","synonyms":[{"name":"5' intron","type":"exact"},{"name":"5' intron sequence","type":"exact"},{"name":"five prime intron","type":"exact"}],"termid":"SO:0000190"}


id: PBO:0076624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor E like","termid":"PBO:0076624"}


id: FYPO:0002113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable curved vegetative cell","synonyms":[{"name":"curved inviable cell","type":"exact"},{"name":"inviable curved cell","type":"exact"},{"name":"inviable curved cell during vegetative growth","type":"exact"},{"name":"inviable curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; curved vegetative cell","type":"exact"}],"termid":"FYPO:0002113"}


id: GO:1904241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904239"},{"relation_name":"positively_regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"activation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"activation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"activation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"narrow"},{"name":"activation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"narrow"},{"name":"activation of p97-Ufd1-Npl4 complex assembly","type":"narrow"},{"name":"activation of p97-Ufd1-Npl4 complex formation","type":"narrow"},{"name":"positive regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"positive regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"positive regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"positive regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"positive regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"up regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"up regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"up regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"up regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"up regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"up regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"up-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"up-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"up-regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"up-regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"up-regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"up-regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"upregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"upregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"upregulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"upregulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"upregulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"upregulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904241"}


id: GO:0061804
data:
  {"annotated_genes":["SJAG_02332","SJAG_01224","SJAG_02336","SJAG_03073","SJAG_02246","SJAG_02761","SJAG_01297","SJAG_00773","SJAG_04841","SJAG_04745","SJAG_00794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90875,93400,94728,95952,96488,97534,100002,104354],"is_not":false,"summary":null,"term":"GO:0061804"},{"annotations":[91412,90871,74623],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[107523],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic prophase.","definition_xrefs":["GOC:dph","PMID:21920317","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle organization","termid":"GO:0007052"},{"relation_name":"part_of","term_name":"mitotic spindle elongation","termid":"GO:0000022"},{"relation_name":"part_of","term_name":"mitotic spindle assembly","termid":"GO:0090307"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00794":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_02246":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0000070","GO:0007010","GO:0008150","GO:0000226","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"mitotic spindle formation (spindle phase one)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitotic spindle elongation during mitotic prophase","type":"exact"},{"name":"mitotic spindle elongation during prophase","type":"exact"},{"name":"mitotic spindle elongation during prophase and prometaphase","type":"exact"}],"termid":"GO:0061804","terms_by_termid":{"GO:0000073":null,"GO:0061804":null,"GO:0110161":null}}


id: SO:0000743
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of an apicoplast, a non-photosynthetic plastid.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apicoplast_sequence","synonyms":[{"name":"apicoplast sequence","type":"exact"}],"termid":"SO:0000743"}


id: PBO:0088396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase family Adi1","termid":"PBO:0088396"}


id: PATO:0001092
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001092 flux value (obsolete PATO:0001092)","termid":"PATO:0001092"}


id: FYPO:0003776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of pseudohyphal growth is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pseudohyphal growth","termid":"FYPO:0000550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased pseudohyphal growth","synonyms":[{"name":"increased filamentous growth","type":"broad"}],"termid":"FYPO:0003776"}


id: PBO:0063291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 5","termid":"PBO:0063291"}


id: MOD:00646
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to either N-acetyl-L-cysteine or S-acetyl-L-cysteine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated residue","termid":"MOD:00394"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"acetylated L-cysteine","synonyms":[{"name":"AcCys","type":"exact"}],"termid":"MOD:00646"}


id: PR:O59787
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A signal recognition particle subunit SRP72 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04206","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit srp72 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.10","secondary_identifiers":["UniProtKB:O59787"],"synonyms":[{"name":"Spom972h-SRP72","type":"exact"},{"name":"signal recognition particle 72 kDa protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59787"}


id: PBO:0064429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 6","termid":"PBO:0064429"}


id: GO:0110078
data:
  {"annotated_genes":["SJAG_05206","SJAG_04784","SJAG_03267","SJAG_00112"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83617,93671,99821,113806],"is_not":false,"summary":null,"term":"GO:0110078"}]},"cv_name":"cellular_component","definition":"A Hsp90 cochaperone complex acting as an adapter between Hps90 and its substrates, members of the PIKK kinase family.","definition_xrefs":["PMID:34233195","PMID:28827813","PMID:20810650","PMID:22505622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_03267":null,"SJAG_04784":null,"SJAG_05206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TTT Hsp90 cochaperone complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TELO2-TTI1-TTI2","type":"exact"},{"name":"TTT complex","type":"exact"},{"name":"Tel2-Tti1-Tti2","type":"exact"},{"name":"Triple T complex","type":"exact"}],"termid":"GO:0110078","terms_by_termid":{"GO:0110078":null}}


id: FYPO:0002810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is normal (i.e. indistinguishable from wild type) in a population in stationary phase. The septation index is the proportion of the population undergoing septation at any given time.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal septation index","termid":"FYPO:0001903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal septation index in stationary phase","synonyms":[{"name":"normal septation in stationary phase","type":"related"},{"name":"normal septation index during stationary phase","type":"exact"}],"termid":"FYPO:0002810"}


id: PR:Q9Y820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pci2 gene.","definition_xrefs":["UniProtKB:Q9Y820","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCI domain-containing protein C1105.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.07c","synonyms":[{"name":"Spom972h-pci2","type":"exact"}],"termid":"PR:Q9Y820"}


id: PBO:0026646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_8-oxo-7,8-dihydroguanine_DNA_N-glycosylase_activity","termid":"PBO:0026646"}


id: PBO:0090221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/snRNA/rRNA pseudouridine synthase Pus7","termid":"PBO:0090221"}


id: PBO:0087771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing 90S preribosome and SSU processome complexes; involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma; Small Subunit processome is also known as SSU processome","termid":"PBO:0087771"}


id: GO:0102210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a rhamnogalacturonan type I = [rhamnogalacturonan I oligosaccharide]-alpha-L-rhamnose + 4-deoxy-4,5-unsaturated D-galactopyranosyluronate-[rhamnogalacturonan I oligosaccharide].","definition_xrefs":["EC:4.2.2.23","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"rhamnogalacturonan endolyase activity","secondary_identifiers":["MetaCyc:RXN-12173"],"termid":"GO:0102210"}


id: PBO:0081264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF32 antisense RNA 2","termid":"PBO:0081264"}


id: PBO:0059778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 4","termid":"PBO:0059778"}


id: PBO:0044351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 38","termid":"PBO:0044351"}


id: GO:0035544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of assembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of SNARE complex assembly","termid":"GO:0035542"},{"relation_name":"negatively_regulates","term_name":"SNARE complex assembly","termid":"GO:0035493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0044085","GO:0016192","GO:0061024","GO:0008150","GO:0006810","GO:0065003"],"is_obsolete":false,"name":"negative regulation of SNARE complex assembly","termid":"GO:0035544"}


id: PBO:0061154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide nucleotide adenylyltransferase 2","termid":"PBO:0061154"}


id: FYPO:0003558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from repeat elements, such as LTRs, retrotransposons, or wtf elements, measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:24957674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased repeat element RNA level","synonyms":[{"name":"increased repeat element RNA accumulation","type":"related"},{"name":"increased repeat element RNA level during mitotic cell cycle","type":"related"},{"name":"increased repeat element RNA level during vegetative growth","type":"exact"},{"name":"increased repeat element transcript level","type":"exact"}],"termid":"FYPO:0003558"}


id: PBO:0040843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLM RecQ like helicase","termid":"PBO:0040843"}


id: GO:2000160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in heart morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Wnt signaling pathway involved in heart development","termid":"GO:0003308"},{"relation_name":"is_a","term_name":"negative regulation of Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0141113"},{"relation_name":"is_a","term_name":"regulation of planar cell polarity pathway involved in heart morphogenesis","termid":"GO:2000159"},{"relation_name":"negatively_regulates","term_name":"planar cell polarity pathway involved in heart morphogenesis","termid":"GO:0061346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of planar cell polarity pathway involved in heart morphogenesis","termid":"GO:2000160"}


id: PBO:0015230
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heteromeric(3)","termid":"PBO:0015230"}


id: PBO:0075856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 4B","termid":"PBO:0075856"}


id: GO:0009532
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proteinaceous ground substance of plastids.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid stroma","termid":"GO:0009532"}


id: PR:Q09677
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A modulator of drug activity B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C5H10.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.05c","secondary_identifiers":["UniProtKB:Q09677"],"synonyms":[{"name":"Spom972h-mdaB","type":"exact"}],"termid":"PR:Q09677"}


id: GO:1904811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dense core granule transport.","definition_xrefs":["GO_REF:0000058","PMID:22699897","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of dense core granule transport","termid":"GO:1904809"},{"relation_name":"positively_regulates","term_name":"dense core granule transport","termid":"GO:1901950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of dense core granule transport","synonyms":[{"name":"activation of dense core granule transport","type":"narrow"},{"name":"activation of dense core vesicle transport","type":"narrow"},{"name":"positive regulation of dense core vesicle transport","type":"exact"},{"name":"up regulation of dense core granule transport","type":"exact"},{"name":"up regulation of dense core vesicle transport","type":"exact"},{"name":"up-regulation of dense core granule transport","type":"exact"},{"name":"up-regulation of dense core vesicle transport","type":"exact"},{"name":"upregulation of dense core granule transport","type":"exact"},{"name":"upregulation of dense core vesicle transport","type":"exact"}],"termid":"GO:1904811"}


id: GO:0005456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a CMP-N-acetylneuraminate from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-727807","Reactome:R-HSA-5651942"],"synonyms":[{"name":"CMP-sialic acid transmembrane transporter activity","type":"broad"}],"termid":"GO:0005456"}


id: GO:0042137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining a neurotransmitter such that it is separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location","termid":"GO:0051235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sequestering of neurotransmitter","synonyms":[{"name":"neurotransmitter biosynthesis and storage","type":"related"},{"name":"neurotransmitter biosynthetic process and storage","type":"related"},{"name":"neurotransmitter retention","type":"exact"},{"name":"neurotransmitter sequestration","type":"exact"},{"name":"neurotransmitter storage","type":"exact"},{"name":"retention of neurotransmitter","type":"exact"},{"name":"sequestration of neurotransmitter","type":"exact"},{"name":"storage of neurotransmitter","type":"exact"}],"termid":"GO:0042137"}


id: GO:0048638
data:
  {"annotated_genes":["SJAG_00514","SJAG_03581","SJAG_02392","SJAG_02169","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85985,90681,91951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[86837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[111135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of developmental growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of developmental growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048638","terms_by_termid":{"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: SO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region immediately adjacent to a promoter which may or may not contain transcription factor binding sites.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter_flanking_region","synonyms":[{"name":"promoter flanking region","type":"exact"}],"termid":"SO:0001952"}


id: PBO:0049115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 179","termid":"PBO:0049115"}


id: GO:0050750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a low-density lipoprotein receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle receptor binding","termid":"GO:0070325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"low-density lipoprotein particle receptor binding","synonyms":[{"name":"LDL receptor binding","type":"exact"},{"name":"low-density lipoprotein receptor binding","type":"exact"}],"termid":"GO:0050750"}


id: PBO:0063239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 4","termid":"PBO:0063239"}


id: PBO:0041560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 67","termid":"PBO:0041560"}


id: PBO:0082438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in cell cycle progression; activates Cdc28p to promote the G2/M transition; may be involved in DNA replication and spindle assembly; accumulates during S phase and G2, then targeted for ubiquitin-mediated degradation; CLB4 has a paralog, CLB3, that arose from the whole genome duplication","termid":"PBO:0082438"}


id: FYECO:0000147
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing sucrose, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sucrose MM","synonyms":[{"name":"sucrose minimal medium","type":"exact"}],"termid":"FYECO:0000147"}


id: GO:0036342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a post-anal tail is generated and organized. A post-anal tail is a muscular region of the body that extends posterior to the anus. The post-anal tail may aid locomotion and balance.","definition_xrefs":["GOC:kmv","Wikipedia:Chordate","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-anal tail morphogenesis","termid":"GO:0036342"}


id: PBO:0055267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2694","termid":"PBO:0055267"}


id: GO:0004574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6)-alpha-D-glucosidic linkages in some oligosaccharides produced from starch and glycogen by alpha-amylase, and in isomaltose. Releases a free alpha-D-glucose.","definition_xrefs":["EC:3.2.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"oligo-1,6-glucosidase activity","synonyms":[{"name":"alpha-limit dextrinase activity","type":"related"},{"name":"alpha-methylglucosidase activity","type":"related"},{"name":"dextrin 6-glucanohydrolase activity","type":"related"},{"name":"dextrin 6alpha-glucanohydrolase activity","type":"related"},{"name":"exo-oligo-1,6-glucosidase activity","type":"related"},{"name":"isomaltase activity","type":"related"},{"name":"limit dextrinase","type":"related"},{"name":"oligosaccharide alpha-1,6-glucohydrolase activity","type":"related"},{"name":"oligosaccharide alpha-1,6-glucosidase activity","type":"related"},{"name":"sucrase-isomaltase activity","type":"related"}],"termid":"GO:0004574"}


id: PBO:0113238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-histone component of centromeric chromatin; acts as a Cse4p specific chaperone that recognizes the centromere-targeting domain in the HFD of histone H3 variant, Cse4p, and recruits it to centromeres; involved in the assembly and maintenance of Cse4-H4 at centromeres; required for kinetochore assembly and G2/M progression; may protect Cse4p from ubiquitination; homolog of mammalian HJURP","termid":"PBO:0113238"}


id: MOD:01058
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dichlorobenzyl","synonyms":[{"name":"Dcb","type":"exact"}],"termid":"MOD:01058"}


id: PBO:0036229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl6","termid":"PBO:0036229"}


id: PBO:0076661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 23, pseudogene","termid":"PBO:0076661"}


id: PBO:0040432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase copper transporting beta pseudogene 1","termid":"PBO:0040432"}


id: GO:0050869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of B cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell activation","termid":"GO:0050864"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte activation","termid":"GO:0051250"},{"relation_name":"negatively_regulates","term_name":"B cell activation","termid":"GO:0042113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell activation","synonyms":[{"name":"down regulation of B cell activation","type":"exact"},{"name":"down-regulation of B cell activation","type":"exact"},{"name":"downregulation of B cell activation","type":"exact"},{"name":"inhibition of B cell activation","type":"narrow"},{"name":"negative regulation of B lymphocyte activation","type":"exact"},{"name":"negative regulation of B-cell activation","type":"exact"},{"name":"negative regulation of B-lymphocyte activation","type":"exact"}],"termid":"GO:0050869"}


id: PBO:0082923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c oxidase subunit; has a role in assembly of respiratory supercomplexes; similar to Rcf1p, and either Rcf1p or Rcf2p is required for late-stage assembly of the Cox12p and Cox13p subunits and for cytochrome c oxidase activity; associates with the cytochrome c oxidase - cytochrome bc1 supercomplex; null mutant accumulates reactive oxygen species; member of the conserved hypoxia induced gene family; C. elegans homolog is functional in yeast","termid":"PBO:0082923"}


id: PBO:0039096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase like 2","termid":"PBO:0039096"}


id: GO:1990736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the depolarizing direction away from the resting potential in a vascular smooth muscle cell.","definition_xrefs":["PMID:20826763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell membrane depolarization","synonyms":[{"name":"regulation of vascular smooth muscle cell membrane depolarization","type":"exact"}],"termid":"GO:1990736"}


id: GO:0034188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an apolipoprotein A-I receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:bf","GOC:BHF","PMID:16443932","GOC:signaling","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"apolipoprotein receptor activity","termid":"GO:0030226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674","GO:0038024"],"is_obsolete":false,"name":"apolipoprotein A-I receptor activity","termid":"GO:0034188"}


id: _global:has_component
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"_global:has_part"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component","secondary_identifiers":["RO:0002180"],"termid":"_global:has_component"}


id: SO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet consisting of two H-bonds in which: the main-chain NH of residue(i) is H-bonded to the main-chain CO of residue(i+5), the main-chain CO of residue i is H-bonded to the main-chain NH of residue(i+4), these loops have an RL nest at residues i+3 and i+4.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_bulge_loop","termid":"SO:0001108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge_loop_six","secondary_identifiers":["BS:00211"],"synonyms":[{"name":"beta bulge loop six","type":"exact"}],"termid":"SO:0001110"}


id: PBO:0053862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1135","termid":"PBO:0053862"}


id: PR:Q9HDX8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An L-gulonolactone oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.12c","secondary_identifiers":["UniProtKB:Q9HDX8"],"synonyms":[{"name":"ALO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"L-galactono-gamma-lactone oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAPB1A10.12c","type":"related"},{"name":"Spom972h-Gulo","type":"exact"}],"termid":"PR:Q9HDX8"}


id: PBO:0044350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 35","termid":"PBO:0044350"}


id: PBO:0034081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-child_nucleus_of_in_hermaphrodite","termid":"PBO:0034081"}


id: PBO:0070491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 26","termid":"PBO:0070491"}


id: PBO:0049193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor AMPA type subunit 4","termid":"PBO:0049193"}


id: GO:0098791
data:
  {"annotated_genes":["SJAG_00669","SJAG_03663","SJAG_04112","SJAG_01516","SJAG_01276","SJAG_04358","SJAG_02177","SJAG_04548","SJAG_01448","SJAG_00567","SJAG_00330","SJAG_03634","SJAG_04770","SJAG_04819","SJAG_02240","SJAG_01571","SJAG_00296","SJAG_01945","SJAG_02902","SJAG_01633","SJAG_03953","SJAG_04739","SJAG_00816","SJAG_03670","SJAG_05209","SJAG_01409","SJAG_01025","SJAG_03756","SJAG_04095","SJAG_02912","SJAG_04398","SJAG_03555","SJAG_03347","SJAG_02525","SJAG_04338","SJAG_02168","SJAG_01488","SJAG_05330","SJAG_03278"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92156,113049],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000137"},{"annotations":[94810],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031985"},{"annotations":[97255,86445,94203,109161],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0005797"},{"annotations":[92518,87266,91659,106937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005795"},{"annotations":[109162,97256,95603,92157,86446],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000138"},{"annotations":[108791],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[101026,114107,93994,83636],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"},{"annotations":[94812,95146,89271,95568,88380,108585,114559,99476,96286,95607,100163,95858,98757,100483,113692,92803,84794,96006,97660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005802"},{"annotations":[86846,103459,89309,91838,87317],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032588"}]},"cv_name":"cellular_component","definition":"A compartment that consists of a lumen and an enclosing membrane, and is part of the Golgi apparatus.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle subcompartment","termid":"GO:0031984"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00330":null,"SJAG_00567":null,"SJAG_00669":null,"SJAG_00816":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_01409":null,"SJAG_01448":null,"SJAG_01488":null,"SJAG_01516":null,"SJAG_01571":null,"SJAG_01633":null,"SJAG_01945":null,"SJAG_02168":null,"SJAG_02177":null,"SJAG_02240":null,"SJAG_02525":null,"SJAG_02902":null,"SJAG_02912":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03555":null,"SJAG_03634":null,"SJAG_03663":null,"SJAG_03670":null,"SJAG_03756":null,"SJAG_03953":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04338":null,"SJAG_04358":null,"SJAG_04398":null,"SJAG_04548":null,"SJAG_04739":null,"SJAG_04770":null,"SJAG_04819":null,"SJAG_05209":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005794","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Golgi apparatus subcompartment","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi subcompartment","type":"exact"}],"termid":"GO:0098791","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0005795":null,"GO:0005797":null,"GO:0005802":null,"GO:0031985":null,"GO:0032588":null,"GO:0140497":null}}


id: GO:0062022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ATP-dependent protein localization to chromatin by which a cohesin ring complex is topologically linked to ssDNA (lagging strand) which is already linked to a dsDNA (leading strand) molecule as part of the mitotic cell cycle.","definition_xrefs":["GOC:vw","PMID:29358048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cohesin loading","termid":"GO:0061780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0051179"],"is_obsolete":false,"name":"mitotic cohesin ssDNA (lagging strand) loading","synonyms":[{"name":"second-DNA capture","type":"exact"}],"termid":"GO:0062022"}


id: PBO:0029935
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_spheroid_cell","termid":"PBO:0029935"}


id: PBO:0069321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 579, pseudogene","termid":"PBO:0069321"}


id: PBO:0064239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCXD2 antisense RNA 1","termid":"PBO:0064239"}


id: GO:0043434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals.","definition_xrefs":["Wikipedia:Peptide_hormone","PMID:11027914","PMID:15134857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to peptide hormone","synonyms":[{"name":"response to peptide hormone stimulus","type":"exact"},{"name":"response to polypeptide hormone stimulus","type":"exact"}],"termid":"GO:0043434"}


id: PBO:0075233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 6","termid":"PBO:0075233"}


id: RO:0002006
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_synaptic_terminal_of","termid":"RO:0002006"}


id: GO:0010746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of plasma membrane long-chain fatty acid transport. Plasma membrane long-chain fatty acid transport is the directed movement of long-chain fatty acids across the plasma membrane. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of long-chain fatty acid import into cell","termid":"GO:0140212"},{"relation_name":"regulates","term_name":"long-chain fatty acid import across plasma membrane","termid":"GO:0015911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of long-chain fatty acid import across plasma membrane","synonyms":[{"name":"regulation of plasma membrane long-chain fatty acid transport","type":"exact"}],"termid":"GO:0010746"}


id: PBO:0000535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Rok1 (predicted)","termid":"PBO:0000535"}


id: FYPO:0003456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize methionine or purines, and therefore requires methionine and at least one purine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for methionine","termid":"FYPO:0000040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for methionine and purine","synonyms":[{"name":"growth auxotrophic for methionine and purine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for methionine and purine during vegetative growth","type":"exact"},{"name":"methionine and purine auxotrophy","type":"exact"}],"termid":"FYPO:0003456"}


id: PBO:0005579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone Cia1","termid":"PBO:0005579"}


id: PR:O14174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit spt20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.10c","synonyms":[{"name":"Spom972h-spt20","type":"exact"}],"termid":"PR:O14174"}


id: PBO:0028511
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_island","termid":"PBO:0028511"}


id: PBO:0043426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic nucleotide gated channel subunit alpha 4","termid":"PBO:0043426"}


id: GO:0045894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mating-type specific process that stops, prevents or reduces the rate of cellular DNA-templated transcription.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating-type specific transcription, DNA-templated","termid":"GO:0007532"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of mating-type specific transcription, DNA-templated","synonyms":[{"name":"down regulation of transcription, mating-type specific","type":"exact"},{"name":"down-regulation of transcription, mating-type specific","type":"exact"},{"name":"downregulation of transcription, mating-type specific","type":"exact"},{"name":"inhibition of transcription, mating-type specific","type":"narrow"},{"name":"negative regulation of mating-type specific transcription, DNA-dependent","type":"exact"}],"termid":"GO:0045894"}


id: PBO:0060475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NANOG neighbor homeobox","termid":"PBO:0060475"}


id: PBO:0031665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_modification","termid":"PBO:0031665"}


id: PBO:0058983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT1 super elongation complex subunit","termid":"PBO:0058983"}


id: PBO:0000623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCHC type (zinc knuckle)","termid":"PBO:0000623"}


id: FYPO:0007991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize valine, and therefore requires leucine in the medium for vegetative cell growth.","definition_xrefs":["PMID:35325114","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for valine","synonyms":[{"name":"growth auxotrophic for valine during mitotic cell cycle","type":"exact"},{"name":"growth auxotrophic for valine during vegetative growth","type":"exact"},{"name":"valine auxotrophy","type":"exact"}],"termid":"FYPO:0007991"}


id: PBO:0112840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERAD pathway protein","termid":"PBO:0112840"}


id: PBO:0088154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Very long chain fatty acyl-CoA synthetase and fatty acid transporter; activates imported fatty acids with a preference for very long lengths (C20-C26); has a separate function in the transport of long chain fatty acids","termid":"PBO:0088154"}


id: PBO:0075341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbitol dehydrogenase 2, pseudogene","termid":"PBO:0075341"}


id: PBO:0057724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-9","termid":"PBO:0057724"}


id: GO:0060368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the Fc receptor mediated stimulatory signaling pathway..","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"Fc receptor mediated stimulatory signaling pathway","termid":"GO:0002431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Fc receptor mediated stimulatory signaling pathway","synonyms":[{"name":"regulation of Fc receptor mediated stimulatory signalling pathway","type":"exact"}],"termid":"GO:0060368"}


id: GO:0044861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein into a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport into membrane raft","termid":"GO:0032596"},{"relation_name":"is_a","term_name":"protein localization to plasma membrane raft","termid":"GO:0044860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"protein transport into plasma membrane raft","termid":"GO:0044861"}


id: GO:0009694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving jasmonic acid, a fatty acid derivative with the formula (1R-(1 alpha, 2 beta(Z)))-3-oxo-2-(2-pentenyl)cyclopentaneacetic acid.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"jasmonic acid metabolic process","synonyms":[{"name":"jasmonic acid metabolism","type":"exact"}],"termid":"GO:0009694"}


id: PBO:0034563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_iron-sulfur_cluster_binding","termid":"PBO:0034563"}


id: GO:1901007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving (S)-scoulerine.","definition_xrefs":["GOC:yaf","UniPathway:UPA00319","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-scoulerine metabolic process (obsolete GO:1901007)","synonyms":[{"name":"(S)-scoulerine metabolism","type":"exact"}],"termid":"GO:1901007"}


id: PBO:0086188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to bacterial secreted DfsB proteins; null mutant displays increased levels of spontaneous Rad52p foci; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0086188"}


id: GO:0008546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Physical interaction between microtubules and chromatin via DNA binding proteins.","definition_xrefs":["PMID:10322137"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule/chromatin interaction (obsolete GO:0008546)","synonyms":[{"name":"microtubule/chromatin interaction","type":"exact"}],"termid":"GO:0008546"}


id: PR:Q9UT42
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsb6 gene.","definition_xrefs":["UniProtKB:Q9UT42","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase lsb6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.19","synonyms":[{"name":"PI4-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-4-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsb6","type":"exact"}],"termid":"PR:Q9UT42"}


id: PBO:0071027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 29","termid":"PBO:0071027"}


id: FYPO:0001304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of myristoyl-CoA ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal myristoyl-CoA ligase activity","termid":"FYPO:0001303"},{"relation_name":"is_a","term_name":"decreased long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000002","FYPO:0000654","FYPO:0005447"],"is_obsolete":false,"name":"decreased myristoyl-CoA ligase activity","synonyms":[{"name":"decreased myristoyl-CoA synthetase activity","type":"related"},{"name":"reduced myristoyl-CoA ligase activity","type":"exact"}],"termid":"FYPO:0001304"}


id: GO:1904175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone demethylase activity (H3-K4 specific).","definition_xrefs":["GOC:TermGenie","GOC:dph","GO_REF:0000059","PMID:24843136"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone demethylase activity (H3-K4 specific) (obsolete GO:1904175)","synonyms":[{"name":"activation of histone demethylase activity (H3-K4 specific)","type":"narrow"},{"name":"up regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"up-regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"upregulation of histone demethylase activity (H3-K4 specific)","type":"exact"}],"termid":"GO:1904175"}


id: PBO:0073967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 16","termid":"PBO:0073967"}


id: PBO:0082597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class II abasic (AP) endonuclease involved in repair of DNA damage; resolves blocked 3' ends that result from removal of misincorporated nucleotides; homolog of human HAP1 and E. coli exoIII","termid":"PBO:0082597"}


id: FYPO:0005540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of telomerase RNA reverse transcriptase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal telomerase RNA reverse transcriptase activity","termid":"FYPO:0005539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000002","FYPO:0005447","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased telomerase RNA reverse transcriptase activity","synonyms":[{"name":"decreased telomerase activity","type":"broad"},{"name":"reduced telomerase RNA reverse transcriptase activity","type":"exact"}],"termid":"FYPO:0005540"}


id: GO:0050682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an AF-2 protein domain, a highly conserved ligand-dependent transactivation domain which is essential for receptor-mediated transcriptional activation.","definition_xrefs":["PMID:9682036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"AF-2 domain binding","termid":"GO:0050682"}


id: GO:0052334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of the cytoskeleton of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of cytoskeleton of other organism involved in symbiotic interaction (obsolete GO:0052334)","synonyms":[{"name":"modification by organism of cytoskeleton of other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052334"}


id: PBO:0072746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A7 pseudogene 2","termid":"PBO:0072746"}


id: RO:0002254
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has developmental contribution from y iff x has some part z such that z develops from y","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_preceded_by","termid":"RO:0002258"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_developmental_contribution_from","termid":"RO:0002254"}


id: PBO:0064652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA2 antisense RNA 1","termid":"PBO:0064652"}


id: PBO:0053658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 824","termid":"PBO:0053658"}


id: PBO:0090757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide synthetase Dph6","termid":"PBO:0090757"}


id: PBO:0062765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily S member 1 pseudogene","termid":"PBO:0062765"}


id: GO:2000086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal to epithelial transition involved in mesonephros morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:2000084"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"},{"relation_name":"positively_regulates","term_name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:0061261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","synonyms":[{"name":"positive regulation of mesonephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:2000086"}


id: PBO:0058860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8089","termid":"PBO:0058860"}


id: PBO:0042243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR5 antisense RNA","termid":"PBO:0042243"}


id: PBO:0061060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium/potassium transporting ATPase interacting 1","termid":"PBO:0061060"}


id: PBO:0003811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc7/UbcP3","termid":"PBO:0003811"}


id: MOD:00900
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-palmitoyl-S-(sn-1-2-oleoyl-3-palmitoyl-glycerol)cysteine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"N-palmitoyl-L-cysteine","termid":"MOD:00069"},{"relation_name":"has_functional_parent","term_name":"S-(sn-1-2-oleoyl-3-palmitoyl-glycerol)cysteine","termid":"MOD:00898"},{"relation_name":"is_a","term_name":"N-palmitoyl-S-diacylglycerol-L-cysteine","termid":"MOD:00899"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-palmitoyl-S-(sn-1-2-oleoyl-3-palmitoyl-glycerol)cysteine","synonyms":[{"name":"(R)-2-hexadecanoylamino-3-[(S)-2-((Z)-9-octadecenoyloxy)-3-(hexadecanoyloxy)propyl]sulfanylpropanoic acid","type":"exact"},{"name":"2-hexadecanoylamino-3-[(S)-2-((Z)-9-octadecenoyloxy)-3-(hexadecanoyloxy)propyl]thiopropanoic acid","type":"exact"}],"termid":"MOD:00900"}


id: GO:0004638
data:
  {"annotated_genes":["SJAG_01081"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110597],"is_not":false,"summary":null,"term":"GO:0004638"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + 2 H+ = 5-amino-1-(5-phospho-D-ribosyl)imidazole + CO2.","definition_xrefs":["EC:4.1.1.21","RHEA:10792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R04209","MetaCyc:AIRCARBOXY-RXN","Reactome:R-HSA-73806"],"synonyms":[{"name":"1-(5-phosphoribosyl)-5-amino-4-imidazolecarboxylate carboxy-lyase activity","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase [5-amino-1-(5-phospho-D-ribosyl)imidazole-forming]","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase activity","type":"related"},{"name":"5-amino-1-ribosylimidazole 5-phosphate carboxylase activity","type":"related"},{"name":"5-phosphoribosyl-5-aminoimidazole carboxylase activity","type":"related"},{"name":"ADE2","type":"related"},{"name":"AIR carboxylase activity","type":"related"},{"name":"class II PurE","type":"related"}],"termid":"GO:0004638","terms_by_termid":{"GO:0004638":null}}


id: FYPO:0007484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype in which nucleation of microtubules from one or more microtubule organizing centers (MTOCs) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"monopolar spindle during meiosis II","termid":"FYPO:0007486"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule nucleation","synonyms":[{"name":"microtubule nucleation defects","type":"exact"}],"termid":"FYPO:0007484"}


id: GO:0022023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a radial glial cell in the forebrain.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell fate commitment","termid":"GO:0021781"},{"relation_name":"is_a","term_name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"},{"relation_name":"part_of","term_name":"forebrain radial glial cell differentiation","termid":"GO:0021861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glial cell fate commitment in forebrain","termid":"GO:0022023"}


id: PBO:0003554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint protein Mad1","termid":"PBO:0003554"}


id: PBO:0004050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Sgf29","termid":"PBO:0004050"}


id: SO:1000110
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation that reverts the sequence of a previous frameshift mutation back to the initial frame.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000110 frame_restoring_sequence_variant (obsolete SO:1000110)","synonyms":[{"name":"frame restoring mutation","type":"exact"},{"name":"frame restoring sequence variant","type":"exact"}],"termid":"SO:1000110"}


id: GO:0016656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + H+ + 2 monodehydroascorbate = NAD+ + 2 ascorbate.","definition_xrefs":["EC:1.6.5.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","termid":"GO:0016655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"monodehydroascorbate reductase (NADH) activity","secondary_identifiers":["MetaCyc:1.6.5.4-RXN","RHEA:14581"],"synonyms":[{"name":"AFR","type":"related"},{"name":"AFR-reductase activity","type":"related"},{"name":"MDAsA reductase (NADPH)","type":"related"},{"name":"MDHA","type":"related"},{"name":"NADH-semidehydroascorbate oxidoreductase activity","type":"related"},{"name":"NADH:AFR oxidoreductase activity","type":"related"},{"name":"NADH:ascorbate radical oxidoreductase activity","type":"related"},{"name":"NADH:monodehydroascorbate oxidoreductase activity","type":"related"},{"name":"NADH:semidehydroascorbic acid oxidoreductase activity","type":"related"},{"name":"SDA reductase activity","type":"related"},{"name":"ascorbate free radical reductase activity","type":"related"},{"name":"ascorbate free-radical reductase activity","type":"related"},{"name":"ascorbic free radical reductase activity","type":"related"},{"name":"monodehydroascorbate reductase activity","type":"exact"},{"name":"semidehydroascorbate reductase activity","type":"related"}],"termid":"GO:0016656"}


id: PATO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000907 f2 fertile (obsolete PATO:0000907)","termid":"PATO:0000907"}


id: PBO:0031574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vegetative_cell","termid":"PBO:0031574"}


id: PBO:0029198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation","termid":"PBO:0029198"}


id: PBO:0075132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRNP40 pseudogene 1","termid":"PBO:0075132"}


id: PBO:0045429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like C-mannosyltransferase 1","termid":"PBO:0045429"}


id: GO:0090014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a leaflet from unspecified parts. A leaflet is one of the ultimate segments of a compound leaf.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaflet formation","termid":"GO:0090014"}


id: PBO:0076227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT16 homolog, facilitates chromatin remodeling subunit","termid":"PBO:0076227"}


id: PBO:0067882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 184","termid":"PBO:0067882"}


id: PBO:0080605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 41","termid":"PBO:0080605"}


id: PBO:0087967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter of thiamine or related compound; contributes to uptake of 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranoside (acadesine); shares sequence similarity with Thi7p","termid":"PBO:0087967"}


id: PBO:0073189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein T","termid":"PBO:0073189"}


id: PATO:0000517
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000517 abiotic stress sensitivity value (obsolete PATO:0000517)","termid":"PATO:0000517"}


id: PBO:0031170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_arginine_import","termid":"PBO:0031170"}


id: GO:0043885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CO + H2O + oxidized ferredoxin = CO2 + reduced ferredoxin.","definition_xrefs":["RHEA:21040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"anaerobic carbon-monoxide dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0652","MetaCyc:1.2.7.4-RXN","EC:1.2.7.4"],"synonyms":[{"name":"CO dehydrogenase activity","type":"exact"},{"name":"CO-dehydrogenase (ferredoxin) activity","type":"exact"},{"name":"CO-dehydrogenase activity","type":"exact"},{"name":"CODH","type":"related"},{"name":"carbon monoxide dehydrogenase (ferredoxin) activity","type":"exact"},{"name":"carbon monoxide dehydrogenase activity","type":"broad"},{"name":"carbon-monoxide dehydrogenase (ferredoxin) activity","type":"exact"},{"name":"carbon-monoxide dehydrogenase activity","type":"broad"},{"name":"carbon-monoxide,water:ferredoxin oxidoreductase activity","type":"exact"},{"name":"carbon-monoxide:(acceptor) oxidoreductase activity","type":"exact"}],"termid":"GO:0043885"}


id: GO:0035772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-13 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-13","termid":"GO:0035963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-13-mediated signaling pathway","synonyms":[{"name":"IL-13-mediated signaling pathway","type":"exact"},{"name":"interleukin-13-mediated signalling pathway","type":"exact"}],"termid":"GO:0035772"}


id: GO:0010793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of mRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA export from nucleus","termid":"GO:0046831"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"regulates","term_name":"mRNA export from nucleus","termid":"GO:0006406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA export from nucleus","termid":"GO:0010793"}


id: PBO:0015684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name derivation, Eighteen Interacting Centromere protein","termid":"PBO:0015684"}


id: PBO:0004211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK inhibitor Rum1","termid":"PBO:0004211"}


id: PBO:0001007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoprotein 3 family (predicted)","termid":"PBO:0001007"}


id: GO:0015624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + ferric-enterobactin(out) = ADP + phosphate + ferric-enterobactin(in).","definition_xrefs":["RHEA:58492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type ferric-enterobactin transporter activity","secondary_identifiers":["MetaCyc:ABC-10-RXN","EC:7.2.2.17"],"synonyms":[{"name":"ATP-dependent ferric-enterobactin transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled ferric-enterobactin transmembrane transporter activity","type":"related"},{"name":"ferric-enterobactin ABC transporter","type":"exact"},{"name":"ferric-enterobactin porter activity","type":"broad"},{"name":"ferric-enterobactin-transporting ATPase activity","type":"related"}],"termid":"GO:0015624"}


id: GO:0071533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by an ankyrin repeat interaction.","definition_xrefs":["InterPro:IPR002110","GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete ankyrin repeat-mediated complex assembly (obsolete GO:0071533)","synonyms":[{"name":"ANK repeat-mediated complex assembly","type":"exact"}],"termid":"GO:0071533"}


id: PBO:0084628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methylglyoxalase that converts methylglyoxal to D-lactate; involved in oxidative stress resistance, diauxic shift, and stationary phase survival; has similarity to E. coli Hsp31 and C. albicans Glx3p; member of the DJ-1/ThiJ/PfpI superfamily, which includes human DJ-1 involved in Parkinson's disease and cancer; exists as a dimer and contains a putative metal-binding site; protein abundance increases in response to DNA replication stress","termid":"PBO:0084628"}


id: PBO:0043679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 6","termid":"PBO:0043679"}


id: PBO:0035695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in_or_involved_in_regulation_of","termid":"PBO:0035695"}


id: PBO:0045538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual oxidase 2","termid":"PBO:0045538"}


id: PBO:0042949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 3","termid":"PBO:0042949"}


id: GO:0033702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1R,5S)-carveol + NAD+ = (S)-carvone + H+ + NADH.","definition_xrefs":["RHEA:14825","EC:1.1.1.275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(+)-trans-carveol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R06117","MetaCyc:RXN-9397"],"synonyms":[{"name":"(+)-trans-carveol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0033702"}


id: PBO:0042799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 295","termid":"PBO:0042799"}


id: PBO:0078507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLR4 interactor with leucine rich repeats","termid":"PBO:0078507"}


id: PBO:0011131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic dynein intermediate chain Dic1","termid":"PBO:0011131"}


id: MOD:01287
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["Unimod:364#K","PubMed:11857757","PubMed:15602776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","termid":"MOD:00789"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form - site K","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","type":"related"},{"name":"ICPL:13C(6)","type":"related"}],"termid":"MOD:01287"}


id: GO:0044190
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the host cell mitochondrion and separating its contents from the host cell cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell mitochondrion","termid":"GO:0033650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell mitochondrial envelope","termid":"GO:0044190"}


id: GO:0072094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range between cells of the ureteric bud terminus and the kidney mesenchyme that positively regulates the formation of the metanephric renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle induction","termid":"GO:0072034"},{"relation_name":"is_a","term_name":"positive regulation of metanephros development","termid":"GO:0072216"},{"relation_name":"positively_regulates","term_name":"metanephric renal vesicle formation","termid":"GO:0072093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric renal vesicle induction","synonyms":[{"name":"positive regulation of metanephros formation","type":"broad"}],"termid":"GO:0072094"}


id: GO:0010130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ethylbenzene, a benzene derivative with an ethyl group attached to the ring, which occurs in the absence of oxygen.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylbenzene catabolic process","termid":"GO:0018915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic ethylbenzene catabolic process","secondary_identifiers":["MetaCyc:PWY-481","UM-BBD_pathwayID:ethb"],"synonyms":[{"name":"anaerobic ethylbenzene breakdown","type":"exact"},{"name":"anaerobic ethylbenzene catabolism","type":"exact"},{"name":"anaerobic ethylbenzene degradation","type":"exact"}],"termid":"GO:0010130"}


id: PBO:0028265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_binding_during_cellular_response_to_rapamycin","termid":"PBO:0028265"}


id: GO:0031289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of one or more phosphate groups to an actin molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"actin modification","termid":"GO:0030047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"actin phosphorylation","termid":"GO:0031289"}


id: GO:0008805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CO + H2O + ferrocytochrome b-561 = CO2 + 2 H+ + 2 ferricytochrome b-561.","definition_xrefs":["GOC:curators","RHEA:48880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","termid":"GO:0016622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"carbon-monoxide oxygenase activity","secondary_identifiers":["GO:0018999","Wikipedia:Carbon-monoxide_dehydrogenase_(cytochrome_b-561)","EC:1.2.5.3","MetaCyc:RXN-21452","GO:0047767","UM-BBD_reactionID:r0650"],"synonyms":[{"name":"carbon monoxide oxidase activity","type":"related"},{"name":"carbon monoxide oxygenase (cytochrome b-561) activity","type":"narrow"},{"name":"carbon monoxide oxygenase activity","type":"exact"},{"name":"carbon monoxide,water:cytochrome b-561 oxidoreductase activity","type":"related"},{"name":"carbon monoxide:methylene blue oxidoreductase activity","type":"narrow"},{"name":"carbon-monoxide dehydrogenase (cytochrome b-561)","type":"related"},{"name":"cytochrome b561","type":"narrow"}],"termid":"GO:0008805"}


id: SO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, located immediately upstream of some TATA box elements with respect to the TSS (+1). Consensus sequence is YGGTCACACTR. Marked spatial preference within core promoter; tend to occur near the TSS, although not as tightly as INR (SO:0000014).","definition_xrefs":["PMID:16827941:12537576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMv4_motif","synonyms":[{"name":"DMv4","type":"exact"},{"name":"DMv4 motif","type":"exact"},{"name":"YGGTCACATR","type":"narrow"},{"name":"directional motif v4","type":"exact"},{"name":"motif 1 element","type":"exact"},{"name":"promoter motif 1","type":"exact"}],"termid":"SO:0001157"}


id: PBO:0071544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 9","termid":"PBO:0071544"}


id: PBO:0086063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that contains 2 PY motifs; ubiquinated by Rsp5p; overexpression confers resistance to arsenite; green fluorescent protein (GFP)-fusion protein localizes it to the cytoplasm; non-essential gene","termid":"PBO:0086063"}


id: PBO:0085275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal integral membrane protein; involved in negative regulation of peroxisome size; partially functionally redundant with Pex31p; genetic interactions suggest action at a step downstream of steps mediated by Pex28p and Pex29p","termid":"PBO:0085275"}


id: MOD:01383
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues and oxidizes a sulfur to form L-cystine S-oxide.","definition_xrefs":["RESID:AA0457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide crosslinked residues","termid":"MOD:00689"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cystine S-oxide","synonyms":[{"name":"(2R)-2-amino-3-[([(2R)-2-amino-2-carboxyethyl]sulfanyl)sulfinyl]propanoic acid","type":"exact"},{"name":"CROSSLNK S-cysteinyl 3-(oxidosulfanyl)alanine (Cys-Cys)","type":"exact"},{"name":"L-cystine S-oxide","type":"exact"},{"name":"S-[(2R)-2-amino-3-oxopropyl] (2R)-2-amino-3-oxopropane-1-sulfinothioate","type":"exact"},{"name":"S-cysteinyl 3-(oxidosulfanyl)alanine","type":"exact"},{"name":"cystine sulfoxide","type":"exact"}],"termid":"MOD:01383"}


id: PBO:0057950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3672","termid":"PBO:0057950"}


id: PBO:0085011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of WASP-Arp23 complex; involved in endocytic site formation; directly inhibits Las17p stimulation of Arp23 complex-mediated actin assembly in vitro; may regulate assembly and disassembly of the septin ring; colocalizes and interacts with septin subunits; potential role in actin cytoskeletal organization","termid":"PBO:0085011"}


id: PR:O13681
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ima1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral inner nuclear membrane protein ima1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.03c","synonyms":[{"name":"Spom972h-ima1","type":"exact"}],"termid":"PR:O13681"}


id: PATO:0000663
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000663 occurrent (obsolete PATO:0000663)","termid":"PATO:0000663"}


id: GO:0003877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + ATP = phosphate + P(1),P(4)-bis(5'-adenosyl)tetraphosphate.","definition_xrefs":["EC:2.7.7.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"ATP:ADP adenylyltransferase activity","secondary_identifiers":["RHEA:16577","MetaCyc:ATP-ADENYLYLTRANSFERASE-RXN"],"synonyms":[{"name":"AP-4-A phosphorylase activity","type":"related"},{"name":"ATP adenylyltransferase activity","type":"broad"},{"name":"adenine triphosphate adenylyltransferase activity","type":"related"},{"name":"bis(5'-nucleosyl)-tetraphosphate phosphorylase (NDP-forming) activity","type":"related"},{"name":"diadenosine 5',5'''-P(1),P(4)-tetraphosphate phosphorylase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate alphabeta-phosphorylase (ADP-forming)","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase activity","type":"related"},{"name":"diadenosinetetraphosphate alpha-beta-phosphorylase activity","type":"related"},{"name":"diadenosinetetraphosphate alphabeta-phosphorylase activity","type":"related"},{"name":"dinucleoside oligophosphate alphabeta-phosphorylase activity","type":"related"}],"termid":"GO:0003877"}


id: PBO:0080416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 subunit of GARP complex","termid":"PBO:0080416"}


id: GO:0044379
data:
  {"annotated_genes":["SJAG_02228"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103253],"is_not":false,"summary":null,"term":"GO:0044379"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, an actin cortical patch.","definition_xrefs":["PMID:21620704","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to actin cytoskeleton","termid":"GO:1903119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to actin cortical patch","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actin cortical patch","type":"exact"}],"termid":"GO:0044379","terms_by_termid":{"GO:0044379":null}}


id: GO:0102388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N,N'-diacetylbacillosamine + H2O = 2,4-diacetamido-2,4,6-trideoxy-alpha-D-mannopyranose + UDP + H+.","definition_xrefs":["EC:3.2.1.184","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"UDP-N,N'-diacetylbacillosamine 2-epimerase activity","secondary_identifiers":["MetaCyc:RXN-13574","RHEA:34491"],"termid":"GO:0102388"}


id: PBO:0057390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548d-1","termid":"PBO:0057390"}


id: PBO:0056436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 9","termid":"PBO:0056436"}


id: PR:000050453
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein rnc1 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Thr-50 of the amino acid sequence represented by UniProtKB:O74919. Example: UniProtKB:O74919, Thr-50, MOD:00047.","definition_xrefs":["PomBase:VW","PMID:12931193","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-binding protein rnc1 (Schizosaccharomyces pombe)","termid":"PR:000050452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnc1/Phos(T50)","pombase_gene_id":"SPCC757.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: RNA-binding protein rnc1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rnc1/Phos:1","type":"exact"},{"name":"UniProtKB:O74919, Thr-50, MOD:00047","type":"narrow"},{"name":"rnc1/Phos(T50)","type":"exact"}],"termid":"PR:000050453"}


id: FYPO:0004690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 at the silent mating-type cassettes occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 acetylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 acetylation at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0004690"}


