# terms

id: GO:0070638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any pyridine nucleoside, a nucleoside in which a pyridine base covalently bonded to a sugar, usually ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside catabolic process","termid":"GO:0009164"},{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyridine nucleoside catabolic process","synonyms":[{"name":"pyridine nucleoside breakdown","type":"exact"},{"name":"pyridine nucleoside catabolism","type":"exact"},{"name":"pyridine nucleoside degradation","type":"exact"}],"termid":"GO:0070638"}


id: PBO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.5","termid":"PBO:0002224"}


id: PBO:0076246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUV39H1 histone lysine methyltransferase","termid":"PBO:0076246"}


id: GO:0043708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a solid substrate, via cell adhesion molecules, contributing to the formation of a biofilm.","definition_xrefs":["GOC:tb","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"},{"relation_name":"part_of","term_name":"submerged biofilm formation","termid":"GO:0090605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in biofilm formation","synonyms":[{"name":"cell adhesion during biofilm formation","type":"related"}],"termid":"GO:0043708"}


id: PBO:0038628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical chemokine receptor 4","termid":"PBO:0038628"}


id: PBO:0077737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tensin 4","termid":"PBO:0077737"}


id: GO:0047157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [myelin proteolipid] + palmityl-CoA = [myelin proteolipid] O-palmitoylprotein + CoA.","definition_xrefs":["PMID:3818589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoyltransferase activity","termid":"GO:0016416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"myelin-proteolipid O-palmitoyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.100-RXN","EC:2.3.1.100"],"synonyms":[{"name":"[myelin-proteolipid] O-palmitoyltransferase activity","type":"related"},{"name":"acyl-protein synthase activity","type":"broad"},{"name":"myelin PLP acyltransferase activity","type":"related"},{"name":"palmitoyl-CoA:[myelin-proteolipid] O-palmitoyltransferase activity","type":"related"}],"termid":"GO:0047157"}


id: PR:O94478
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug137 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 137 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.11","synonyms":[{"name":"Spom972h-mug137","type":"exact"}],"termid":"PR:O94478"}


id: PBO:0030859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization","termid":"PBO:0030859"}


id: GO:0010141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway by which guanine, xanthine and their nucleoside from purine nucleotides breakdown are converted back to purine nucleotides. The pathway is important in cells where there is no de-novo purine nucleotides biosynthesis.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete guanine, xanthine and their nucleoside salvage (obsolete GO:0010141)","synonyms":[{"name":"guanine, xanthine and their nucleoside salvage","type":"exact"}],"termid":"GO:0010141"}


id: PBO:0045749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBP like","termid":"PBO:0045749"}


id: GO:0102370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lupeol + NADPH(4-) + O2 + H+ = betulin + NADP(3-) + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"lupeol 28-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-13497"],"termid":"GO:0102370"}


id: FYPO:0002235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more sterol esters measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular sterol ester level","synonyms":[{"name":"increased cellular sterol ester level during mitotic cell cycle","type":"related"},{"name":"increased cellular sterol ester level during vegetative growth","type":"exact"},{"name":"increased sterol ester accumulation","type":"related"}],"termid":"FYPO:0002235"}


id: GO:0042367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of biotin, cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biotin metabolic process","termid":"GO:0006768"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"biotin catabolic process","synonyms":[{"name":"biotin breakdown","type":"exact"},{"name":"biotin catabolism","type":"exact"},{"name":"biotin degradation","type":"exact"},{"name":"vitamin B7 catabolic process","type":"exact"},{"name":"vitamin B7 catabolism","type":"exact"},{"name":"vitamin H catabolic process","type":"exact"},{"name":"vitamin H catabolism","type":"exact"}],"termid":"GO:0042367"}


id: PBO:0077593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 4","termid":"PBO:0077593"}


id: PBO:0057137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 218-2","termid":"PBO:0057137"}


id: GO:0018410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The alteration of the C-terminal amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein amino acid modification","synonyms":[{"name":"peptide or protein carboxyl-terminal blocking","type":"related"},{"name":"peptide/protein carboxyl-terminal blocking","type":"related"}],"termid":"GO:0018410"}


id: GO:0060071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of non-canonical Wnt signaling pathway in which Wnt binding to its receptor on the surface of a target cell results in the activation small G proteins such as Rho, Rac, and Cdc42 which, in turn activate effectors, including C-Jun N-terminal kinase (JNK) and Rho kinase (Rok). The signaling ends with change in the transcription of target genes and/or reorganisation of the cytoskeleton.","definition_xrefs":["PMID:11532397","PMID:25349257","PMID:28293032","PMID:37804416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Wnt signaling pathway, planar cell polarity pathway","synonyms":[{"name":"PCP pathway","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway","type":"exact"},{"name":"Wnt-JNK signaling pathway","type":"related"},{"name":"Wnt-PCP signaling pathway","type":"related"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"non-canonical Wnt signaling pathway","type":"related"},{"name":"planar cell polarity pathway","type":"exact"}],"termid":"GO:0060071"}


id: FYPO:0000840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level","synonyms":[{"name":"normal cellular RNA level","type":"exact"},{"name":"normal mRNA level","type":"narrow"},{"name":"normal transcript level","type":"exact"},{"name":"RNA accumulation: normal","type":"related"}],"termid":"FYPO:0000840"}


id: PBO:0047395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO34 antisense RNA 1","termid":"PBO:0047395"}


id: PBO:0001521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A (predicted)","termid":"PBO:0001521"}


id: PBO:0049714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1 pseudogene 2","termid":"PBO:0049714"}


id: PBO:0054007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1337","termid":"PBO:0054007"}


id: FYPO:0006240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA strand elongation involved in mitotic nuclear DNA replication is decreased during a cellular response to DNA damage.","definition_xrefs":["PMID:28806726","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of mitotic DNA replication elongation","termid":"FYPO:0003923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0000631"],"is_obsolete":false,"name":"decreased rate of mitotic DNA replication elongation during cellular response to DNA damage","synonyms":[{"name":"decreased rate of DNA replication elongation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased rate of DNA strand elongation involved in mitotic DNA replication during cellular response to DNA damage","type":"exact"},{"name":"decreased rate of DNA strand elongation involved in nuclear cell cycle DNA replication during cellular response to DNA damage","type":"exact"},{"name":"decreased rate of mitotic DNA replication elongation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"reduced rate of mitotic DNA replication elongation during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0006240"}


id: GO:0102894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + leucodopachrome = H+ + cyclo-dopa 5-O-glucoside + UDP.","definition_xrefs":["GOC:pz","PMID:15196939","PMID:15695438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"UDPG:cyclo-DOPA 5-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8481"],"termid":"GO:0102894"}


id: PBO:0045107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA meiotic recombinase 1","termid":"PBO:0045107"}


id: PBO:0027964
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cell_during_nitrogen_starvation","termid":"PBO:0027964"}


id: PBO:0056464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase 2","termid":"PBO:0056464"}


id: GO:0048690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axon extension involved in regeneration.","definition_xrefs":["GOC:dgh","GOC:lm","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon extension","termid":"GO:0030516"},{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"regulates","term_name":"axon extension involved in regeneration","termid":"GO:0048677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axon extension involved in regeneration","termid":"GO:0048690"}


id: GO:0070036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate, to drive the unwinding of a DNA or RNA helix.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete GTP-dependent helicase activity (obsolete GO:0070036)","termid":"GO:0070036"}


id: PBO:0057020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 107","termid":"PBO:0057020"}


id: GO:0075223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium development","termid":"GO:0075310"},{"relation_name":"regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporangium germination","synonyms":[{"name":"modulation of sporangium germination","type":"narrow"},{"name":"modulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075223"}


id: GO:0014917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which pressure natriuresis increases the rate of diuresis.","definition_xrefs":["GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of diuresis by pressure natriuresis (obsolete GO:0014917)","synonyms":[{"name":"positive regulation of diuresis by pressure natriuresis","type":"exact"}],"termid":"GO:0014917"}


id: GO:0140721
data:
  {"annotated_genes":["SJAG_02594"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060698"},{"annotations":[84965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008428"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a nuclease.","definition_xrefs":["PMID:28785032","PMID:29554913","PMID:30046034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02594":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0098772","GO:0004857","GO:0030234","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"nuclease inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140721","terms_by_termid":{"GO:0008428":null,"GO:0060698":null}}


id: GO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an opsonin, such as a complement component or antibody, deposited on the surface of a bacteria, virus, immune complex, or other particulate material.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"opsonin binding","termid":"GO:0001846"}


id: PBO:0076410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 5 like pseudogene 1","termid":"PBO:0076410"}


id: PBO:0056823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 14A","termid":"PBO:0056823"}


id: PBO:0025426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP2A regulatory subunit B-55 Pab1","termid":"PBO:0025426"}


id: PBO:0062649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 12 subfamily D member 3","termid":"PBO:0062649"}


id: PBO:0113485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"This gene is absent from the reference genome, but present in various other strains' genomes; similar to MAL63","termid":"PBO:0113485"}


id: PBO:0038764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3 pseudogene 1","termid":"PBO:0038764"}


id: PBO:0028099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_DNA_binding_specificity","termid":"PBO:0028099"}


id: PBO:0058403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4773-2","termid":"PBO:0058403"}


id: FYPO:0006852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through S phase of the meiotic cell cycle (preceding meiosis I) is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of meiotic cell cycle phase","termid":"FYPO:0006851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of meiotic S phase","synonyms":[{"name":"decreased duration of S phase during meiotic cell cycle","type":"exact"},{"name":"decreased duration of premeiotic DNA replication","type":"related"},{"name":"reduced duration of meiotic S phase","type":"exact"}],"termid":"FYPO:0006852"}


id: GO:0097664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Grr1 in S. cerevisiae (Pof2 in S. pombe).","definition_xrefs":["GOC:jd","GOC:vw","PMID:15147268","PMID:10213692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Grr1/Pof2 ubiquitin ligase complex","termid":"GO:0097664"}


id: GO:0120257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-threonine.","definition_xrefs":["GOC:krc","PMID:22802624","PMID:16728640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine acetylation","termid":"GO:0120257"}


id: GO:0021572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 6 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:curators","GO_REF:0000021","GOC:dph","GOC:dgh","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 development","termid":"GO:0021572"}


id: GO:0072260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric interstitial fibroblast.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal interstitial fibroblast fate commitment","termid":"GO:0072153"},{"relation_name":"part_of","term_name":"metanephric interstitial fibroblast differentiation","termid":"GO:0072258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric interstitial fibroblast fate commitment","synonyms":[{"name":"metanephros interstitial cell fate commitment","type":"exact"}],"termid":"GO:0072260"}


id: PBO:0067146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 196, pseudogene","termid":"PBO:0067146"}


id: PBO:0075493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily F member 3","termid":"PBO:0075493"}


id: PBO:0086361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ABC transporter","termid":"PBO:0086361"}


id: PBO:0029450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_galactomannan_level","termid":"PBO:0029450"}


id: PBO:0056732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript pseudogene 1","termid":"PBO:0056732"}


id: PBO:0050475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A3","termid":"PBO:0050475"}


id: PBO:0024806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enabled_by","termid":"PBO:0024806"}


id: PBO:0073200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 3A","termid":"PBO:0073200"}


id: PBO:0028583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_vegetative_growth","termid":"PBO:0028583"}


id: PR:O14197
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5D6.04 gene.","definition_xrefs":["UniProtKB:O14197","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C5D6.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.04","synonyms":[{"name":"Spom972h-SPAC5D6.04","type":"exact"}],"termid":"PR:O14197"}


id: GO:0003340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the metanephros.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003339"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000697"},{"relation_name":"negatively_regulates","term_name":"mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003340"}


id: GO:0102458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-vanilloyl-beta-D-glucose = cyanin betaine + vanillate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside 5-O glucosyltransferase (vanilloyl-glucose dependent) activity (obsolete GO:0102458)","termid":"GO:0102458"}


id: GO:0010792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang that results in the repair of a double strand break via single-strand annealing.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA double-strand break processing","termid":"GO:0000729"},{"relation_name":"part_of","term_name":"double-strand break repair via single-strand annealing","termid":"GO:0045002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"DNA double-strand break processing involved in repair via single-strand annealing","termid":"GO:0010792"}


id: GO:0060719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the chorionic trophoblast over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:16983341","CL:0011101","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"chorionic trophoblast cell differentiation","termid":"GO:0060718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorionic trophoblast cell development","termid":"GO:0060719"}


id: PBO:0029751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_modification","termid":"PBO:0029751"}


id: MOD:01990
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to a glycinium (protonated glycine).","definition_xrefs":["PubMed:18688235","ChEBI:64723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated glycine (glycinium) residue","termid":"MOD:01990"}


id: PBO:0027668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_cytoplasmic_microtubules_present_in_increased_numbers","termid":"PBO:0027668"}


id: PBO:0076901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 55","termid":"PBO:0076901"}


id: GO:0106327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-O-[N-acetyl-alpha-D-galactosaminyl]-L-threonyl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-N-acetyl-alpha-D-galactosaminyl]-L-threonyl-[protein] + H+ + UDP.","definition_xrefs":["RHEA:46880"],"gene_count":0,"genotype_count":0,"name":"obsolete acetylgalactosaminyl-O-glycosyl-threonyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity (obsolete GO:0106327)","termid":"GO:0106327"}


id: PBO:0003394
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human INT6","termid":"PBO:0003394"}


id: FYPO:0000903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, occurs at a lower rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0007019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0007954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of microtubule depolymerization during vegetative growth","synonyms":[{"name":"decreased microtubule depolymerization rate during vegetative growth","type":"exact"},{"name":"decreased rate of microtubule catastrophe during vegetative growth","type":"related"},{"name":"decreased rate of microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"decreased rate of microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased rate of microtubule shrinkage during vegetative growth","type":"related"},{"name":"increased microtubule stability during vegetative growth","type":"related"},{"name":"reduced rate of microtubule depolymerization during vegetative growth","type":"exact"}],"termid":"FYPO:0000903"}


id: FYPO:0004069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II does not occur.","definition_xrefs":["GO:0071619","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished phosphorylation of RNA polymerase II C-terminal domain serine 2 residues","synonyms":[{"name":"abolished phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during mitotic cell cycle","type":"related"},{"name":"abolished phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","type":"exact"},{"name":"abolished phosphorylation of RNA polymerase II CTD serine 2 residues","type":"exact"},{"name":"phosphorylation of RNA polymerase II C-terminal domain serine 2 residues abolished","type":"exact"}],"termid":"FYPO:0004069"}


id: GO:0141042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production by a symbiont of high levels of cyclic AMP in a host cell, impairing host cellular functions in multiple ways, including ATP depletion, interference with host intracellular signaling, cytoskeletal defects and apoptosis-related cell death. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:27731909","PMID:33013916","PMID:19516256","PMID:16390441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated cAMP intoxication of host cell","synonyms":[{"name":"cAMP intoxication in host","type":"exact"}],"termid":"GO:0141042"}


id: FYPO:0007298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein aggregate center formation is abnormal. Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein aggregate center formation","synonyms":[{"name":"abnormal PAC formation","type":"exact"},{"name":"abnormal protein aggregate center formation during mitotic cell cycle","type":"related"},{"name":"abnormal protein aggregate center formation during vegetative growth","type":"exact"},{"name":"abnormal protein aggregate centre formation","type":"exact"}],"termid":"FYPO:0007298"}


id: PBO:0086681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; YLR157W-D has a paralog, YLR161W, that arose from a segmental duplication","termid":"PBO:0086681"}


id: PBO:0070674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 45","termid":"PBO:0070674"}


id: FYECO:0000402
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which xylose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylose added","termid":"FYECO:0000402"}


id: FYPO:0003906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0002060","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on bleomycin","synonyms":[{"name":"normal cell population growth in presence of bleomycin","type":"exact"},{"name":"normal cell population growth on bleomycin","type":"exact"},{"name":"normal cellular response to bleomycin","type":"related"},{"name":"normal vegetative cell population growth on bleomycin","type":"exact"}],"termid":"FYPO:0003906"}


id: PBO:0111764
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rrm RNA recognition motif","termid":"PBO:0111764"}


id: PBO:0067149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 199, pseudogene","termid":"PBO:0067149"}


id: FYPO:0004806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the cell wall is broken down to a lesser extent than in wild type at the site of cell-cell fusion during mating.","definition_xrefs":["PomBase:mah","PMID:25825517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall disassembly at cell fusion site","termid":"FYPO:0006499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0004805"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004805","FYPO:0000301","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"incomplete cell wall disassembly at cell fusion site","synonyms":[{"name":"incomplete cell wall disassembly at cell fusion site during conjugation with cellular fusion","type":"exact"},{"name":"incomplete cell wall disassembly at cell fusion site during mating","type":"exact"},{"name":"incomplete cell wall disassembly at cell-cell fusion focus","type":"exact"},{"name":"incomplete cell wall disassembly at cell-cell fusion site","type":"exact"},{"name":"incomplete fungal-type cell wall disassembly at cell fusion site","type":"exact"},{"name":"incomplete fungal-type cell wall disassembly involved in conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0004806"}


id: GO:0032288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the wraps of cell membrane that constitute myelin are laid down around an axon in the central or peripheral nervous system.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"part_of","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"myelin assembly","synonyms":[{"name":"myelin formation","type":"related"},{"name":"myelin sheath assembly","type":"exact"}],"termid":"GO:0032288"}


id: PBO:0045375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate mannosyltransferase subunit 1, catalytic","termid":"PBO:0045375"}


id: PBO:0083723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 100kDa subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane prior to SNARE-mediated fusion","termid":"PBO:0083723"}


id: PBO:0017467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-functionally_related_to","termid":"PBO:0017467"}


id: GO:0090733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A extracellular matrix complex involved in cell adhesion and cell migration. Typically homotrimeric or homohexameric. In mammals, four complexes exist: Tenascin-C, Tenascin-N (also known as Tenascin-W), Tenascin-X and Tenascin-R.","definition_xrefs":["PMID:17909022","PMID:12845616","PMID:11731446","PMID:23658023","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-matrix adhesion","termid":"GO:0098637"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tenascin complex","synonyms":[{"name":"Tenascin-C","type":"narrow"},{"name":"Tenascin-N","type":"narrow"},{"name":"Tenascin-R","type":"narrow"},{"name":"Tenascin-W","type":"narrow"},{"name":"Tenascin-X","type":"narrow"}],"termid":"GO:0090733"}


id: PBO:0042464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 4 pseudogene 1","termid":"PBO:0042464"}


id: GO:0047551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-oxoaldehyde + NAD+ + H2O = a 2-oxo acid + NADH + H+.","definition_xrefs":["EC:1.2.1.23","MetaCyc:2-OXOALDEHYDE-DEHYDROGENASE-NAD+-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-oxoaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["Wikipedia:2-oxoaldehyde_dehydrogenase_(NAD+)","RHEA:22276"],"synonyms":[{"name":"2-ketoaldehyde dehydrogenase","type":"broad"},{"name":"2-oxoaldehyde dehydrogenase (NAD+)","type":"related"},{"name":"2-oxoaldehyde:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"NAD-dependent alpha-ketoaldehyde dehydrogenase activity","type":"related"},{"name":"NAD-linked alpha-ketoaldehyde dehydrogenase activity","type":"related"},{"name":"alpha-ketoaldehyde dehydrogenase activity","type":"broad"},{"name":"methylglyoxal dehydrogenase activity","type":"broad"}],"termid":"GO:0047551"}


id: PBO:0027495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_etoposide","termid":"PBO:0027495"}


id: PBO:0072395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 like","termid":"PBO:0072395"}


id: GO:0042818
data:
  {"annotated_genes":["SJAG_01881","SJAG_00707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83860],"is_not":false,"summary":null,"term":"GO:0042818"},{"annotations":[107919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol, one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00707":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"pyridoxamine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxamine metabolism","type":"exact"}],"termid":"GO:0042818","terms_by_termid":{"GO:0010144":null,"GO:0042818":null}}


id: GO:0090136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an epithelial cell to another epithelial cell via adhesion molecules.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"epithelial cell-cell adhesion","termid":"GO:0090136"}


id: PBO:0085246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (PPIase); nuclear proline isomerase; affects expression of multiple genes via its role in nucleosome assembly; catalyzes isomerization of proline residues in histones H3 and H4, which affects lysine methylation of those histones; PPIase domain acts as a transcriptional repressor when tethered to DNA by lexA, and repressor activity is dependent on PPIase activity; contains a nucleoplasmin-like fold and can form pentamers","termid":"PBO:0085246"}


id: GO:0070734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 27 of the histone.","definition_xrefs":["GOC:pr","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 methylation (obsolete GO:0070734)","synonyms":[{"name":"histone H3 K27 methylation","type":"exact"},{"name":"histone H3K27me","type":"exact"},{"name":"histone lysine H3 K27 methylation","type":"exact"}],"termid":"GO:0070734"}


id: PBO:0088857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type transcription factor (Pc-like)","termid":"PBO:0088857"}


id: PR:Q10432
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ccq1 gene.","definition_xrefs":["UniProtKB:Q10432","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil quantitatively-enriched protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.07","synonyms":[{"name":"SMC protein ccq1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ccq1","type":"exact"},{"name":"structural maintenance of chromosomes protein ccq1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10432"}


id: CHEBI:30746
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzoic acid","termid":"CHEBI:30746"}


id: MOD:00085
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-methyl-L-lysine.","definition_xrefs":["DeltaMass:165","PubMed:3926756","ChEBI:17604","Unimod:34#K","PubMed:11875433","RESID:AA0076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"monomethylated L-lysine","termid":"MOD:01683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N6-methyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-methylaminohexanoic acid","type":"exact"},{"name":"MOD_RES N6-methyllysine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N(zeta)-methyllysine","type":"exact"},{"name":"N-methyl Lysyl","type":"exact"},{"name":"N6-methyl-L-lysine","type":"exact"},{"name":"N6-methylated L-lysine","type":"exact"},{"name":"N6Me1Lys","type":"exact"},{"name":"epsilon-methyllysine","type":"exact"}],"termid":"MOD:00085"}


id: GO:0097107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a postsynaptic density, a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse.","definition_xrefs":["GOC:BHF","GOC:sjp","PMID:21525273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic density organization","termid":"GO:0097106"},{"relation_name":"is_a","term_name":"postsynaptic specialization assembly","termid":"GO:0098698"},{"relation_name":"part_of","term_name":"excitatory synapse assembly","termid":"GO:1904861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"postsynaptic density assembly","synonyms":[{"name":"PSD assembly","type":"exact"},{"name":"post synaptic density assembly","type":"exact"},{"name":"post-synaptic density assembly","type":"exact"}],"termid":"GO:0097107"}


id: GO:1903239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of positive regulation of the force of heart contraction by chemical signal.","definition_xrefs":["GO_REF:0000058","GOC:rl","PMID:17242280","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of positive regulation of the force of heart contraction by chemical signal (obsolete GO:1903239)","synonyms":[{"name":"regulation of positive regulation of the force of heart contraction by chemical signal","type":"exact"},{"name":"regulation of positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"}],"termid":"GO:1903239"}


id: PR:000027619
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 phosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:Q10424-1, MOD:00696.","definition_xrefs":["PMID:15660136","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zip1/PhosRes+","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"PomBase_original_PRO_term_name: transcription factor zip1 phosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-zip1/PhosRes+","type":"exact"},{"name":"zip1/PhosRes+","type":"exact"}],"termid":"PR:000027619"}


id: PBO:0040022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 10","termid":"PBO:0040022"}


id: PBO:0085403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein of the Major Facilitator Superfamily (MFS); involved in amino acid uptake and drug sensitivity; VBA5 has a paralog, VBA3, that arose from a segmental duplication","termid":"PBO:0085403"}


id: PBO:0003546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex large subunit Rpc1 (predicted)","termid":"PBO:0003546"}


id: PBO:0071610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 28","termid":"PBO:0071610"}


id: PBO:0056822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 13B (pseudogene)","termid":"PBO:0056822"}


id: PBO:0052953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinectin 1","termid":"PBO:0052953"}


id: PR:O74809
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2D10.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.19c","synonyms":[{"name":"Spom972h-alb1","type":"exact"}],"termid":"PR:O74809"}


id: FYPO:0002892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of heterochromatin organization is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle. Heterochromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic heterochromatin, a compact and highly condensed form of chromatin.","definition_xrefs":["GO:0070828","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization during vegetative growth","termid":"FYPO:0002891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal heterochromatin organization during vegetative growth","synonyms":[{"name":"normal heterochromatin organisation during vegetative growth","type":"exact"},{"name":"normal heterochromatin organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002892"}


id: PBO:0055132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2551","termid":"PBO:0055132"}


id: PBO:0002370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD phosphatase Rtr1 (predicted)","termid":"PBO:0002370"}


id: GO:0050927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"positively_regulates","term_name":"positive chemotaxis","termid":"GO:0050918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of positive chemotaxis","synonyms":[{"name":"activation of positive chemotaxis","type":"narrow"},{"name":"stimulation of positive chemotaxis","type":"narrow"},{"name":"up regulation of positive chemotaxis","type":"exact"},{"name":"up-regulation of positive chemotaxis","type":"exact"},{"name":"upregulation of positive chemotaxis","type":"exact"}],"termid":"GO:0050927"}


id: PBO:0065481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2","termid":"PBO:0065481"}


id: PBO:0031159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tyrosine_import","termid":"PBO:0031159"}


id: PBO:0058798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7704","termid":"PBO:0058798"}


id: FYPO:0004349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methylglyoxal is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to methylglyoxal","synonyms":[{"name":"decreased RNA accumulation during cellular response to methylglyoxal","type":"related"},{"name":"decreased RNA level during cellular response to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to methylglyoxal during vegetative growth","type":"exact"},{"name":"decreased transcript level during cellular response to methylglyoxal","type":"exact"},{"name":"reduced RNA level during cellular response to methylglyoxal","type":"exact"}],"termid":"FYPO:0004349"}


id: GO:0039014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the pronephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in pronephros development","synonyms":[{"name":"cell differentiation involved in pronephric kidney development","type":"exact"}],"termid":"GO:0039014"}


id: GO:0010452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 36 of the histone.","definition_xrefs":["GOC:tb","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K36 methylation (obsolete GO:0010452)","synonyms":[{"name":"histone H3 K36 methylation","type":"exact"},{"name":"histone H3K36me","type":"exact"},{"name":"histone lysine H3 K36 methylation","type":"exact"}],"termid":"GO:0010452"}


id: PBO:0079817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"up-regulated in colorectal cancer liver metastasis","termid":"PBO:0079817"}


id: PBO:0031216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_Mre11_complex_assembly","termid":"PBO:0031216"}


id: PBO:0003974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp7 (predicted)","termid":"PBO:0003974"}


id: MOD:00269
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(sn-1-glycerophosphoryl)-L-serine.","definition_xrefs":["Unimod:419#S","PubMed:8645220","RESID:AA0264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(sn-1-glycerophosphoryl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[(2Xi)-2,3-dihydroxypropyl]phosphonoxypropanoic acid","type":"exact"},{"name":"Glycerophospho","type":"related"},{"name":"MOD_RES O-(sn-1-glycerophosphoryl)serine","type":"exact"},{"name":"O-(sn-1-glycerophosphoryl)-L-serine","type":"exact"},{"name":"O3-(sn-1-glycerophosphoryl)-L-serine","type":"exact"},{"name":"O3-2,3-dihydroxypropyl hydrogen phosphate-L-serine ester","type":"exact"},{"name":"O3-L-serine glyceryl-1-phosphodiester","type":"exact"},{"name":"alpha-glycerophosphoryl serine","type":"exact"},{"name":"glycerophospho","type":"related"},{"name":"glycerophosphoserine","type":"exact"}],"termid":"MOD:00269"}


id: PBO:0041419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C8 gamma chain","termid":"PBO:0041419"}


id: PBO:0078919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 8-1","termid":"PBO:0078919"}


id: GO:0006074
data:
  {"annotated_genes":["SJAG_04771","SJAG_05285","SJAG_04483","SJAG_04666","SJAG_04462","SJAG_04668","SJAG_02222","SJAG_00876","SJAG_03705","SJAG_01787","SJAG_01288","SJAG_01835","SJAG_03587","SJAG_00610","SJAG_00218","SJAG_01290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[84204,87694,103871,109262,102183,105394,111905,87684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[88512],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[83651,88515],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[113973,88501,88517,101423,86881,98946],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,3-beta-D-glucan metabolic process","type":"broad"},{"name":"1,3-beta-D-glucan metabolism","type":"exact"},{"name":"1,3-beta-glucan metabolic process","type":"broad"},{"name":"beta-1,3 glucan metabolic process","type":"exact"},{"name":"beta-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0006074","terms_by_termid":{"GO:0034413":null,"GO:0060635":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0070620
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the epidermal growth factor receptor (EGFR), Grb2 and the guanine nucleotide exchange factor Sos (or an ortholog thereof, such as mSos1), and is involved in linking EGFR activation to the p21-Ras pathway.","definition_xrefs":["GOC:mah","PMID:7798267","PMID:8940013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"EGFR-Grb2-Sos complex","synonyms":[{"name":"Egfr-Grb2-mSos1 complex, EGF stimulated","type":"narrow"}],"termid":"GO:0070620"}


id: PBO:0048279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 14","termid":"PBO:0048279"}


id: FYPO:0004925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the outer surface of the ascospore wall is rougher and less regular than normal.","definition_xrefs":["PMID:20410137","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore wall morphology","termid":"FYPO:0003138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0002946","FYPO:0000121","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"irregular ascospore wall","synonyms":[{"name":"irregular ascospore wall surface texture","type":"exact"},{"name":"irregular spore wall","type":"exact"},{"name":"rough ascospore wall","type":"exact"}],"termid":"FYPO:0004925"}


id: GO:0060485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesenchymal tissue over time, from its formation to the mature structure. A mesenchymal tissue is made up of loosely packed stellate cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchyme development","synonyms":[{"name":"mesenchymal development","type":"exact"}],"termid":"GO:0060485"}


id: GO:0043172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ferredoxin, any simple, nonenzymatic iron-sulfur protein that is characterized by having equal numbers of atoms of iron and labile sulfur. Iron and sulfur atoms are present in one or two clusters of two or four atoms of each.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ferredoxin biosynthetic process (obsolete GO:0043172)","synonyms":[{"name":"ferredoxin anabolism","type":"exact"},{"name":"ferredoxin biosynthesis","type":"exact"},{"name":"ferredoxin formation","type":"exact"},{"name":"ferredoxin synthesis","type":"exact"}],"termid":"GO:0043172"}


id: FYPO:0007818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:34147496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein ubiquitination","termid":"FYPO:0007946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein ubiquitination during nitrogen starvation","synonyms":[{"name":"decreased protein ubiquitination during nitrogen depletion","type":"exact"},{"name":"decreased protein ubiquitination during nitrogen deprivation","type":"exact"},{"name":"decreased protein ubiquitinylation during nitrogen starvation","type":"exact"},{"name":"decreased protein ubiquitylation during nitrogen starvation","type":"exact"},{"name":"reduced protein ubiquitination during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007818"}


id: FYPO:0002544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) does not occur during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation at RxxS site during cellular response to hydrogen peroxide (obsolete FYPO:0002544)","synonyms":[{"name":"abolished protein serine phosphorylation at Arg-X-X-Ser site during cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein serine phosphorylation at PAS site during cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to H2O2","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at arginine-X-X-serine site during cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein serine phosphorylation at phospho-Akt site during cellular response to hydrogen peroxide","type":"exact"},{"name":"protein serine phosphorylation abolished at RxxS site during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002544"}


id: PBO:0004543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc4","termid":"PBO:0004543"}


id: PBO:0028781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stable_shortened_telomeres","termid":"PBO:0028781"}


id: GO:0006180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates deoxyguanosine from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyguanosine biosynthetic process","termid":"GO:0042452"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside salvage","termid":"GO:0043098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"deoxyguanosine salvage","termid":"GO:0006180"}


id: GO:1902269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of polyamine transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of polyamine transmembrane transport","termid":"GO:1902267"},{"relation_name":"positively_regulates","term_name":"polyamine transmembrane transport","termid":"GO:1902047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of polyamine transmembrane transport","synonyms":[{"name":"activation of polyamine transmembrane transport","type":"narrow"},{"name":"up regulation of polyamine transmembrane transport","type":"exact"},{"name":"up-regulation of polyamine transmembrane transport","type":"exact"},{"name":"upregulation of polyamine transmembrane transport","type":"exact"}],"termid":"GO:1902269"}


id: GO:0071274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isoquinoline alkaloids, alkaloid compounds that contain bicyclic N-containing aromatic rings and are derived from a 3,4-dihydroxytyramine (dopamine) precursor that undergoes a Schiff base addition with aldehydes of different origin.","definition_xrefs":["GOC:mah","PMID:23666088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isoquinoline alkaloid catabolic process","synonyms":[{"name":"ipecac alkaloid catabolism","type":"related"},{"name":"isoquinoline alkaloid breakdown","type":"exact"},{"name":"isoquinoline alkaloid catabolism","type":"exact"},{"name":"isoquinoline alkaloid degradation","type":"exact"}],"termid":"GO:0071274"}


id: PBO:0091564
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 is incorporated as a placeholder in new nucleosomes at centromeres during mitotic S phase, and is replaced by Cnp1 (CENP-A) in G2 phase","termid":"PBO:0091564"}


id: PBO:0059291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42 pseudogene 6","termid":"PBO:0059291"}


id: PBO:0048587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 1","termid":"PBO:0048587"}


id: GO:0047648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methylhexanamide + H2O = hexanoate + methylammonium.","definition_xrefs":["RHEA:20081","EC:3.5.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"alkylamidase activity","secondary_identifiers":["KEGG_REACTION:R03620","MetaCyc:ALKYLAMIDASE-RXN"],"synonyms":[{"name":"N-methylhexanamide amidohydrolase activity","type":"related"}],"termid":"GO:0047648"}


id: PBO:0034625
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomerase_RNA_reverse_transcriptase_activity","termid":"PBO:0034625"}


id: PBO:0067799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 101","termid":"PBO:0067799"}


id: PBO:0030603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mistimed_mitosis","termid":"PBO:0030603"}


id: GO:0047071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione + O2 = 3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1(10),2-dien-4-oate + H+.","definition_xrefs":["RHEA:21352","EC:1.13.11.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r1151","MetaCyc:1.13.11.25-RXN","KEGG_REACTION:R04597"],"synonyms":[{"name":"3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione:oxygen 4,5-oxidoreductase (decyclizing)","type":"related"},{"name":"3-alkylcatechol 2,3-dioxygenase activity","type":"related"},{"name":"steroid 4,5-dioxygenase activity","type":"broad"}],"termid":"GO:0047071"}


id: GO:0070672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-15 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-15","synonyms":[{"name":"response to IL-15","type":"exact"}],"termid":"GO:0070672"}


id: PBO:0005099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP215/Dis1 family","termid":"PBO:0005099"}


id: PBO:0034746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved GTPase Gpn2 (predicted)","termid":"PBO:0034746"}


id: PBO:0036492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl5","termid":"PBO:0036492"}


id: PBO:0005769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L17 (predicted)","termid":"PBO:0005769"}


id: GO:0046899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + AMP = nucleoside diphosphate + ADP.","definition_xrefs":["EC:2.7.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nucleoside triphosphate adenylate kinase activity","secondary_identifiers":["MetaCyc:2.7.4.10-RXN","RHEA:13749","Reactome:R-HSA-1008248"],"synonyms":[{"name":"GTP:AMP phosphotransferase","type":"narrow"},{"name":"guanosine triphosphate-adenylate kinase","type":"narrow"},{"name":"isozyme 3 of adenylate kinase activity","type":"related"},{"name":"nucleoside triphosphate-adenosine monophosphate transphosphorylase activity","type":"exact"},{"name":"nucleoside-triphosphate-adenylate kinase activity","type":"exact"},{"name":"nucleoside-triphosphate:AMP phosphotransferase activity","type":"related"}],"termid":"GO:0046899"}


id: PBO:0085251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripherally bound inner membrane protein of the mitochondrial matrix; involved in membrane insertion of C-terminus of Cox2p, interacts genetically and physically with Cox18p","termid":"PBO:0085251"}


id: PBO:0050215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 32","termid":"PBO:0050215"}


id: FYPO:0005123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA transcribed from late meiotic genes measured in a cell is lower than normal during the meiotic cell cycle. Late meiotic genes are normally transcribed during spore maturation.","definition_xrefs":["PMID:17927811","PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of late meiotic gene mRNA during meiotic cell cycle","synonyms":[{"name":"decreased level of late meiosis gene mRNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of late meiotic gene RNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of late meiotic gene transcripts during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005123"}


id: GO:0035060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SWI/SNF-type complex that contains 8 to 14 proteins, including both conserved (core) and nonconserved components; contains the ATPase product of the Drosophila brm (brahma) or mammalian SMARCA2/BAF190B/BRM gene, or an ortholog thereof.","definition_xrefs":["GOC:bhm","PMID:12482982","PMID:10809665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"brahma complex","synonyms":[{"name":"BRM complex","type":"exact"}],"termid":"GO:0035060"}


id: GO:0002544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Inflammation of prolonged duration (weeks or months) in which active inflammation, tissue destruction, and attempts at repair are proceeding simultaneously. Although it may follow acute inflammation, chronic inflammation frequently begins insidiously, as a low-grade, smoldering, often asymptomatic response.","definition_xrefs":["GO_REF:0000022","ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chronic inflammatory response","termid":"GO:0002544"}


id: FYPO:0008100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated 5S rRNA measured in a cell is higher than normal during phosphate starvation.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased polyadenylated 5S rRNA level during cellular response to phosphate starvation","termid":"FYPO:0008100"}


id: GO:0050976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of touch in which a mechanical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"sensory perception of touch","termid":"GO:0050975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception of touch","synonyms":[{"name":"perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"tactition, sensory detection of mechanical stimulus","type":"exact"}],"termid":"GO:0050976"}


id: GO:0072534
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense extracellular matrix (ECM) that forms around many neuronal cell bodies and dendrites late in development and is responsible for synaptic stabilization in the adult brain.","definition_xrefs":["PMID:18364019","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perisynaptic extracellular matrix","termid":"GO:0098966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"perineuronal net","synonyms":[{"name":"PNN","type":"exact"}],"termid":"GO:0072534"}


id: GO:0032529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microvillus on a follicle cell. A microvillus is a thin cylindrical membrane-covered projection on the surface of an animal cell containing a core bundle of actin filaments.","definition_xrefs":["GOC:sart","PMID:16507588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvillus organization","termid":"GO:0032528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicle cell microvillus organization","synonyms":[{"name":"follicle cell microvillus organisation","type":"exact"},{"name":"follicle cell microvillus organization and biogenesis","type":"related"}],"termid":"GO:0032529"}


id: PR:P87145
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein VAC14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03640","PANTHER:PTHR16023:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein VAC14 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.03","secondary_identifiers":["UniProtKB:P87145"],"synonyms":[{"name":"Spom972h-VAC14","type":"exact"}],"termid":"PR:P87145"}


id: PBO:0041313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 68","termid":"PBO:0041313"}


id: MOD:01658
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 4-(4-dimethylaminophenylazo)benzenesulfonyl chloride, dabsyl chloride, to form an alpha-amino-Dabsyl-derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Dabsyl chloride derivatized residue","termid":"MOD:01656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino-Dabsyl derivatized residue","synonyms":[{"name":"N2DabsylRes","type":"exact"}],"termid":"MOD:01658"}


id: PBO:0000541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor Alp41","termid":"PBO:0000541"}


id: GO:0060755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of mast cell chemotaxis. Mast cell chemotaxis is the movement of a mast cell in response to an external stimulus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte chemotaxis","termid":"GO:0002689"},{"relation_name":"is_a","term_name":"regulation of mast cell chemotaxis","termid":"GO:0060753"},{"relation_name":"negatively_regulates","term_name":"mast cell chemotaxis","termid":"GO:0002551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell chemotaxis","termid":"GO:0060755"}


id: GO:0075203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of symbiont penetration hypha formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of penetration hypha formation","termid":"GO:0075202"},{"relation_name":"is_a","term_name":"positive regulation by symbiont of entry into host","termid":"GO:0075294"},{"relation_name":"positively_regulates","term_name":"penetration hypha formation","termid":"GO:0075201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of penetration hypha formation","synonyms":[{"name":"positive regulation of symbiont penetration hypha formation for entry into host","type":"exact"}],"termid":"GO:0075203"}


id: PBO:0039727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4","termid":"PBO:0039727"}


id: PBO:0056245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage interferon regulatory lncRNA","termid":"PBO:0056245"}


id: GO:0140917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across an organelle membrane, into a mitochondrion.","definition_xrefs":["PMID:21289295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"zinc ion import into mitochondrion","termid":"GO:0140917"}


id: GO:1902516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to sn-glycerol 3-phosphate.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:23013274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"sn-glycerol 3-phosphate binding","termid":"GO:1902516"}


id: PBO:0029705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_elongated_mononucleate_vegetative_cell_with_mislocalized_septum_near_new_end","termid":"PBO:0029705"}


id: PBO:0050296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1","termid":"PBO:0050296"}


id: PBO:0005776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit, SAP128 family (predicted)","termid":"PBO:0005776"}


id: FYPO:0006521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid cohesion is abnormal. Mitotic sister chromatid cohesion is the process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle.","definition_xrefs":["GO:0007064","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid cohesion","synonyms":[{"name":"abnormal mitotic chromosome cohesion","type":"exact"},{"name":"abnormal mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"abnormal sister chromatid cohesion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006521"}


id: PBO:0034506
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_meiotic_crossover_associated_with_gene_conversion","termid":"PBO:0034506"}


id: PBO:0062708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily G member 2","termid":"PBO:0062708"}


id: PBO:0073462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein C","termid":"PBO:0073462"}


id: PBO:0087527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of MRX complex with Mre11p and Xrs2p; complex is involved in processing double-strand DNA breaks in vegetative cells, initiation of meiotic DSBs, telomere maintenance, and nonhomologous end joining; forms nuclear foci upon DNA replication stress","termid":"PBO:0087527"}


id: PBO:0063650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 7","termid":"PBO:0063650"}


id: PBO:0017778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Apc3","termid":"PBO:0017778"}


id: PR:G2TRQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRQ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3E7.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.17","synonyms":[{"name":"Spom972h-SPBC3E7.17","type":"exact"}],"termid":"PR:G2TRQ5"}


id: GO:0005797
data:
  {"annotated_genes":["SJAG_00567","SJAG_04739","SJAG_03278","SJAG_03634"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86445,94203,97255,109161],"is_not":false,"summary":null,"term":"GO:0005797"}]},"cv_name":"cellular_component","definition":"The middle Golgi cisterna (or cisternae).","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi cisterna","termid":"GO:0031985"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00567":null,"SJAG_03278":null,"SJAG_03634":null,"SJAG_04739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005794"],"is_obsolete":false,"name":"Golgi medial cisterna","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi apparatus medial cisterna","type":"exact"}],"termid":"GO:0005797","terms_by_termid":{"GO:0005797":null}}


id: GO:0090192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.","definition_xrefs":["GOC:dph","GOC:yaf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"regulates","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glomerulus development","termid":"GO:0090192"}


id: PBO:0061948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 1","termid":"PBO:0061948"}


id: PBO:0041576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C21orf62 antisense RNA 1","termid":"PBO:0041576"}


id: GO:1903422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle recycling.","definition_xrefs":["GO_REF:0000058","GOC:pad","GOC:PARL","GOC:TermGenie","PMID:22745285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle recycling","termid":"GO:0036465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle recycling","synonyms":[{"name":"down regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"down regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"down regulation of synaptic vesicle recycling","type":"exact"},{"name":"down-regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"down-regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"down-regulation of synaptic vesicle recycling","type":"exact"},{"name":"downregulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"downregulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"downregulation of synaptic vesicle recycling","type":"exact"},{"name":"inhibition of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"inhibition of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"inhibition of synaptic vesicle recycling","type":"narrow"},{"name":"negative regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"negative regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"}],"termid":"GO:1903422"}


id: GO:0006220
data:
  {"annotated_genes":["SJAG_04627","SJAG_02887","SJAG_00444","SJAG_03708","SJAG_04354","SJAG_04657","SJAG_04487","SJAG_00964","SJAG_05024","SJAG_03771","SJAG_00197","SJAG_00533","SJAG_02874","SJAG_04709","SJAG_04713","SJAG_03676","SJAG_03164","SJAG_00779","SJAG_00694","SJAG_00412","SJAG_00885","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[85570,112812,108006,94603,89512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[111657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[88531,103351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[67024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[96170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[110056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[111000,89057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[91594,103352,88532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[114085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[104469,85498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[85499,114086,88533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[114087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[104470,95087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[95088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[111658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[110058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"},{"annotations":[83599,89058,111002,88069,84586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[89515,96172,102602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00412":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00885":null,"SJAG_00964":null,"SJAG_02874":null,"SJAG_02887":null,"SJAG_03164":null,"SJAG_03676":null,"SJAG_03708":null,"SJAG_03771":null,"SJAG_04354":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine metabolic process","type":"broad"},{"name":"pyrimidine metabolism","type":"broad"},{"name":"pyrimidine nucleotide metabolism","type":"exact"}],"termid":"GO:0006220","terms_by_termid":{"GO:0006225":null,"GO:0006226":null,"GO:0006227":null,"GO:0006228":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0006241":null,"GO:0006256":null,"GO:0009224":null,"GO:0044205":null,"GO:0044206":null,"GO:0044210":null,"GO:0044211":null,"GO:0046036":null,"GO:0046081":null,"GO:0046704":null,"GO:0046705":null}}


id: PBO:0040196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 9","termid":"PBO:0040196"}


id: GO:0034173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 11 signaling pathway","termid":"GO:0034171"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"positive regulation of TLR11 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034173"}


id: GO:0047709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bis(2-ethylhexyl)phthalate + H2O = 2-ethylhexan-1-ol + 2-ethylhexyl phthalate + H+.","definition_xrefs":["RHEA:15529","EC:3.1.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"bis(2-ethylhexyl)phthalate esterase activity","secondary_identifiers":["KEGG_REACTION:R04202","MetaCyc:BIS2-ETHYLHEXYLPHTHALATE-ESTERASE-RXN"],"synonyms":[{"name":"DEHP esterase activity","type":"related"},{"name":"bis(2-ethylhexyl)phthalate acylhydrolase activity","type":"related"}],"termid":"GO:0047709"}


id: GO:0098922
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the dense core granule membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"dense core granule membrane","termid":"GO:0032127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of dense core granule membrane","termid":"GO:0098922"}


id: GO:0050348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 alpha,alpha'-trehalose 6-mycolate = alpha,alpha'-trehalose 6,6'-bismycolate + alpha,alpha-trehalose.","definition_xrefs":["EC:2.3.1.122","RHEA:23472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trehalose O-mycolyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07248","MetaCyc:RXN1G-874"],"synonyms":[{"name":"alpha,alpha'-trehalose 6-monomycolate:alpha,alpha'-trehalose mycolyltransferase activity","type":"related"},{"name":"alpha,alpha'-trehalose-6-mycolate:alpha,alpha'-trehalose-6-mycolate 6'-mycolyltransferase activity","type":"related"}],"termid":"GO:0050348"}


id: PBO:0051739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 6 pseudogene 1","termid":"PBO:0051739"}


id: PBO:0048848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonadotropin releasing hormone 1","termid":"PBO:0048848"}


id: GO:0061435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription from a mobile element promoter.","definition_xrefs":["GOC:dph","PMID:12230120","PMID:9271107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transcription from a mobile element promoter","termid":"GO:0061435"}


id: PBO:0069888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1177, pseudogene","termid":"PBO:0069888"}


id: SO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of an exon.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"},{"relation_name":"part_of","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon_region","synonyms":[{"name":"exon region","type":"exact"}],"termid":"SO:0000852"}


id: GO:0008168
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id: PBO:0064982
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id: GO:0050538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoyl-L-2-amino acid + H2O = L-2-amino acid + NH3 + CO2. The N-carbamoyl-L-2-amino acid is a 2-ureido carboxylate.","definition_xrefs":["MetaCyc:3.5.1.87-RXN","EC:3.5.1.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-carbamoyl-L-amino-acid hydrolase activity","secondary_identifiers":["RHEA:17581"],"synonyms":[{"name":"L-carbamoylase activity","type":"related"},{"name":"N-carbamoyl-L-amino acid amidohydrolase activity","type":"related"}],"termid":"GO:0050538"}


id: PBO:0085273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal integral membrane peroxin; involved in the regulation of peroxisomal size, number and distribution; genetic interactions suggest that Pex28p and Pex29p act at steps upstream of those mediated by Pex30p, Pex31p, and Pex32p","termid":"PBO:0085273"}


id: GO:0003114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of norepinephrine into the bloodstream increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart rate by norepinephrine","termid":"GO:0003066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by circulating norepinephrine","synonyms":[{"name":"positive regulation of heart rate by circulating noradrenaline","type":"exact"}],"termid":"GO:0003114"}


id: SO:0001179
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U3 snoRNA is a member of the box C/D class of small nucleolar RNAs. The U3 snoRNA secondary structure is characterised by a small 5' domain (with boxes A and A'), and a larger 3' domain (with boxes B, C, C', and D), the two domains being linked by a single-stranded hinge. Boxes B and C form the B/C motif, which appears to be exclusive to U3 snoRNAs, and boxes C' and D form the C'/D motif. The latter is functionally similar to the C/D motifs found in other snoRNAs. The 5' domain and the hinge region act as a pre-rRNA-binding domain. The 3' domain has conserved protein-binding sites. Both the box B/C and box C'/D motifs are sufficient for nuclear retention of U3 snoRNA. The box C'/D motif is also necessary for nucleolar localization, stability and hypermethylation of U3 snoRNA. Both box B/C and C'/D motifs are involved in specific protein interactions and are necessary for the rRNA processing functions of U3 snoRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"C_D_box_snoRNA","termid":"SO:0000593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3_snoRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Small_nucleolar_RNA_U3"],"synonyms":[{"name":"U3 small nucleolar RNA","type":"exact"},{"name":"U3 snoRNA","type":"exact"},{"name":"small nucleolar RNA U3","type":"exact"},{"name":"snoRNA U3","type":"exact"}],"termid":"SO:0001179"}


id: PBO:0061657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear mitotic apparatus protein 1","termid":"PBO:0061657"}


id: PBO:0002456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Zip1","termid":"PBO:0002456"}


id: GO:0071092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha3-beta1 integrin-tissue transglutaminase complex","synonyms":[{"name":"ITGA3-ITGB1-TGM2 complex","type":"narrow"}],"termid":"GO:0071092"}


id: GO:0050637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + acetyl-CoA + 18 H+ + 8 malonyl-CoA + 11 NADPH = S-adenosyl-L-homocysteine + 8 CO2 + 9 CoA + dihydromonacolin L + 6 H2O + 11 NADP+.","definition_xrefs":["EC:2.3.1.161","RHEA:18565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"lovastatin nonaketide synthase activity","secondary_identifiers":["MetaCyc:2.3.1.161-RXN","KEGG_REACTION:R07251"],"synonyms":[{"name":"acyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl- and enoyl-reducing, thioester-hydrolysing)","type":"related"}],"termid":"GO:0050637"}


id: PBO:0048313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 24","termid":"PBO:0048313"}


id: PR:Q9USS4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC557.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USS4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C557.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC557.02c","synonyms":[{"name":"Spom972h-SPBC557.02c","type":"exact"}],"termid":"PR:Q9USS4"}


id: GO:0034973
data:
  {"annotated_genes":["SJAG_03936","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90511,106614],"is_not":false,"summary":null,"term":"GO:0034973"}]},"cv_name":"cellular_component","definition":"A protein complex that contains a protein kinase (Sid2 in S. pombe) and its regulatory subunit (Mob1). The Sid2p-Mob1p kinase complex is a component of the septation initiation network in fission yeast (called the mitotic exit network in S. cerevisiae) and is required for cytokinesis. The analogous complex in S. cerevisiae is called Dbf2p-Mob1p complex.","definition_xrefs":["PMID:15060149","GOC:vw","PMID:10837231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03936":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Sid2-Mob1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dbf2p-Mob1p complex","type":"exact"},{"name":"Sid2-Mob1 kinase complex","type":"exact"},{"name":"Sid2p-Mob1p complex","type":"exact"}],"termid":"GO:0034973","terms_by_termid":{"GO:0034973":null}}


id: GO:1905747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of saliva secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23419067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of saliva secretion","termid":"GO:0046877"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"negatively_regulates","term_name":"saliva secretion","termid":"GO:0046541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of saliva secretion","synonyms":[{"name":"down regulation of saliva secretion","type":"exact"},{"name":"down regulation of salivation","type":"exact"},{"name":"down-regulation of saliva secretion","type":"exact"},{"name":"down-regulation of salivation","type":"exact"},{"name":"downregulation of saliva secretion","type":"exact"},{"name":"downregulation of salivation","type":"exact"},{"name":"inhibition of saliva secretion","type":"narrow"},{"name":"inhibition of salivation","type":"narrow"},{"name":"negative regulation of salivation","type":"exact"}],"termid":"GO:1905747"}


id: GO:0016111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyterpenoid compounds, terpenoids with more than eight isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"polyterpenoid metabolic process","synonyms":[{"name":"polyterpene metabolic process","type":"narrow"},{"name":"polyterpene metabolism","type":"narrow"},{"name":"polyterpenoid metabolism","type":"exact"}],"termid":"GO:0016111"}


id: PBO:0066457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 10, pseudogene","termid":"PBO:0066457"}


id: GO:0055114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.","definition_xrefs":["GOC:mlg","GOC:dhl","GOC:ecd","GOC:jid","GOC:rph","GOC:jh2"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidation-reduction process (obsolete GO:0055114)","synonyms":[{"name":"oxidation reduction","type":"exact"},{"name":"oxidoreductase process","type":"exact"}],"termid":"GO:0055114"}


id: PBO:0078887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 1-4","termid":"PBO:0078887"}


id: PBO:0077818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible nuclear protein 2","termid":"PBO:0077818"}


id: GO:1904186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly ofa post-anaphase microtubule array.","definition_xrefs":["PMID:15004232","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-anaphase microtubule array organization","synonyms":[{"name":"PAA organization","type":"exact"},{"name":"post-anaphase array organization","type":"exact"},{"name":"post-anaphase microtubule array organisation","type":"exact"}],"termid":"GO:1904186"}


id: PBO:0047668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flagellum associated containing coiled-coil domains 1","termid":"PBO:0047668"}


id: PBO:0067033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 47, pseudogene","termid":"PBO:0067033"}


id: PBO:0045495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSEL antisense RNA 1","termid":"PBO:0045495"}


id: PBO:0051688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indolethylamine N-methyltransferase","termid":"PBO:0051688"}


id: FYECO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which pantothenate was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited pantothenate","termid":"FYECO:0000189"}


id: FYECO:0000043
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which palmitic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ palmitic acid","termid":"FYECO:0000043"}


id: PBO:0076829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEPSIN adaptor related protein complex 4 accessory protein","termid":"PBO:0076829"}


id: PBO:0046165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E74 like ETS transcription factor 3","termid":"PBO:0046165"}


id: PBO:0049170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAPL antisense RNA 1","termid":"PBO:0049170"}


id: PBO:0083375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially/completely overlaps the verified ORF PGD1/YGL025C","termid":"PBO:0083375"}


id: GO:0044455
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a mitochondrial membrane, either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial membrane part (obsolete GO:0044455)","termid":"GO:0044455"}


id: GO:1900772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the indole alkaloid fumitremorgin B.","definition_xrefs":["GOC:di","PMID:18683158","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound biosynthetic process","termid":"GO:1901378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"fumitremorgin B biosynthetic process","secondary_identifiers":["GO:1900770"],"synonyms":[{"name":"Lanosulin anabolism","type":"related"},{"name":"Lanosulin biosynthesis","type":"related"},{"name":"Lanosulin biosynthetic process","type":"related"},{"name":"Lanosulin formation","type":"related"},{"name":"Lanosulin metabolic process","type":"related"},{"name":"Lanosulin metabolism","type":"related"},{"name":"Lanosulin synthesis","type":"related"},{"name":"fumitremorgin B anabolism","type":"exact"},{"name":"fumitremorgin B biosynthesis","type":"exact"},{"name":"fumitremorgin B formation","type":"exact"},{"name":"fumitremorgin B metabolic process","type":"broad"},{"name":"fumitremorgin B metabolism","type":"exact"},{"name":"fumitremorgin B synthesis","type":"exact"}],"termid":"GO:1900772"}


id: PBO:0004945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine diphosphorylase Uap1/Qri1(predicted)","termid":"PBO:0004945"}


id: PBO:0086892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane protein involved in the biotin biosynthesis; responsible for uptake of 7-keto 8-aminopelargonic acid; BIO5 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis","termid":"PBO:0086892"}


id: PBO:0075041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-4","termid":"PBO:0075041"}


id: GO:0034839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (5R)-menth-2-enone + H2O = (5R)-3-hydroxymenthone.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete menth-2-enone hydratase activity (obsolete GO:0034839)","termid":"GO:0034839"}


id: PBO:0063278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 4","termid":"PBO:0063278"}


id: RO:0002471
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_eaten_by","termid":"RO:0002471"}


id: GO:0005816
data:
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functionally homologous to the animal cell centrosome.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":158,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00104":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00142":null,"SJAG_00229":null,"SJAG_00317":null,"SJAG_00333":null,"SJAG_00356":null,"SJAG_00405":null,"SJAG_00430":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00719":null,"SJAG_00724":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00800":null,"SJAG_00807":null,"SJAG_00856":null,"SJAG_00907":null,"SJAG_00910":null,"SJAG_00918":null,"SJAG_00982":null,"SJAG_01050":null,"SJAG_01082":null,"SJAG_01146":null,"SJAG_01188":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01232":null,"SJAG_01242":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01386":null,"SJAG_01401":null,"SJAG_01422":null,"SJAG_01464":null,"SJAG_01483":null,"SJAG_01538":null,"SJAG_01546":null,"SJAG_01563":null,"SJAG_01620":null,"SJAG_01662":null,"SJAG_01745":null,"SJAG_01756":null,"SJAG_01760":null,"SJAG_01775":null,"SJAG_01777":null,"SJAG_01785":null,"SJAG_01790":null,"SJAG_01799":null,"SJAG_01805":null,"SJAG_02045":null,"SJAG_02058":null,"SJAG_02098":null,"SJAG_02104":null,"SJAG_02169":null,"SJAG_02186":null,"SJAG_02232":null,"SJAG_02246":null,"SJAG_02248":null,"SJAG_02266":null,"SJAG_02286":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02368":null,"SJAG_02444":null,"SJAG_02514":null,"SJAG_02529":null,"SJAG_02542":null,"SJAG_02550":null,"SJAG_02556":null,"SJAG_02561":null,"SJAG_02609":null,"SJAG_02616":null,"SJAG_02624":null,"SJAG_02724":null,"SJAG_02736":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02795":null,"SJAG_02886":null,"SJAG_02921":null,"SJAG_02923":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03052":null,"SJAG_03062":null,"SJAG_03092":null,"SJAG_03116":null,"SJAG_03200":null,"SJAG_03216":null,"SJAG_03259":null,"SJAG_03264":null,"SJAG_03287":null,"SJAG_03342":null,"SJAG_03351":null,"SJAG_03376":null,"SJAG_03491":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03540":null,"SJAG_03544":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03612":null,"SJAG_03615":null,"SJAG_03681":null,"SJAG_03695":null,"SJAG_03708":null,"SJAG_03810":null,"SJAG_03835":null,"SJAG_03843":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03915":null,"SJAG_03936":null,"SJAG_04010":null,"SJAG_04140":null,"SJAG_04143":null,"SJAG_04239":null,"SJAG_04280":null,"SJAG_04455":null,"SJAG_04457":null,"SJAG_04461":null,"SJAG_04468":null,"SJAG_04498":null,"SJAG_04551":null,"SJAG_04558":null,"SJAG_04595":null,"SJAG_04597":null,"SJAG_04609":null,"SJAG_04653":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_04901":null,"SJAG_04931":null,"SJAG_04943":null,"SJAG_04980":null,"SJAG_05185":null,"SJAG_05196":null,"SJAG_05205":null,"SJAG_05207":null,"SJAG_05260":null,"SJAG_05264":null,"SJAG_05266":null,"SJAG_05290":null,"SJAG_05309":null,"SJAG_05315":null,"SJAG_05978":null,"SJAG_06270":null,"SJAG_07018":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"spindle pole body","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21733045":null,"PMID:32109380":null,"PMID:32243490":null},"secondary_identifiers":["Wikipedia:Spindle_pole_body"],"synonyms":[{"name":"SPB","type":"exact"}],"termid":"GO:0005816","terms_by_termid":{"GO:0000093":null,"GO:0005816":null,"GO:0035974":null,"GO:0044732":null,"GO:0061493":null,"GO:0061496":null,"GO:0061497":null,"GO:0061499":null,"GO:0071957":null,"GO:0071958":null,"GO:1990334":null}}


id: PBO:0113353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for pheromone-induced projection (shmoo) formation; regulates septin architecture during mating; has an RVXF motif that mediates targeting of Glc7p to mating projections; also detected in peroxisomes; interacts with Cdc12p; AFR1 has a paralog, YER158C, that arose from the whole genome duplication","termid":"PBO:0113353"}


id: FYPO:0005205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the rate or occurrence of DNA polymerase processivity factor activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA polymerase processivity factor activity","termid":"FYPO:0004499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased DNA polymerase processivity factor activity","termid":"FYPO:0005205"}


id: PBO:0043493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 2","termid":"PBO:0043493"}


id: GO:0062046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dehydropipecolic acid + NAD(P)H + H+ = L-pipecolic acid + NAD(P)+.","definition_xrefs":["PMID:28330936","PMID:27758894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dehydropipecolic acid reductase","termid":"GO:0062046"}


id: PBO:0030274
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0030274"}


id: GO:0000993
data:
  {"annotated_genes":["SJAG_00139","SJAG_00448","SJAG_03118","SJAG_01610","SJAG_04353","SJAG_02691","SJAG_01151","SJAG_04933","SJAG_00483","SJAG_01707"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69977,71206,75165,77533,77549],"is_not":false,"summary":null,"term":"GO:0000993"},{"annotations":[64351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[76877,71485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[75439,77268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001139"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase II core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of twelve subunits.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal RNA polymerase II transcription machinery binding","termid":"GO:0001099"},{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01707":null,"SJAG_02691":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II complex binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"RNA polymerase II core binding","type":"exact"},{"name":"RNAP II core binding","type":"exact"}],"termid":"GO:0000993","terms_by_termid":{"GO:0000993":null,"GO:0001139":null,"GO:0099122":null,"GO:1990269":null}}


id: GO:1900610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of F-9775A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"F-9775A metabolic process","termid":"GO:1900609"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound catabolic process","termid":"GO:1901377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"F-9775A catabolic process","synonyms":[{"name":"F-9775A breakdown","type":"exact"},{"name":"F-9775A catabolism","type":"exact"},{"name":"F-9775A degradation","type":"exact"}],"termid":"GO:1900610"}


id: PBO:0040645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAZ1A antisense RNA 1","termid":"PBO:0040645"}


id: PBO:0090231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med9","termid":"PBO:0090231"}


id: PBO:0078320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 2","termid":"PBO:0078320"}


id: GO:0061732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate in the mitochondrion. The process begins with the transport of pyruvate from the cytosol to the mitochondrion where it is subsequently decarboxylated to form acetyl-CoA.","definition_xrefs":["GOC:dph","ISBN:0201090910"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial acetyl-CoA biosynthetic process from pyruvate (obsolete GO:0061732)","termid":"GO:0061732"}


id: PBO:0066391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor accessory protein 1","termid":"PBO:0066391"}


id: PBO:0085618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in early stages of meiotic recombination; possibly involved in the coordination of recombination and meiotic division; mutations lead to premature initiation of the first meiotic division","termid":"PBO:0085618"}


id: FYPO:0003599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an snRNA molecule is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0034472","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA processing","termid":"FYPO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal snRNA 3'-end processing","synonyms":[{"name":"normal snRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"normal snRNA 3'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0003599"}


id: PBO:0050705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 2","termid":"PBO:0050705"}


id: SO:1000105
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000105 sequence_variant_affecting_polypeptide_amino_acid_sequence (obsolete SO:1000105)","synonyms":[{"name":"mutation affecting polypeptide amino acid sequence","type":"related"},{"name":"sequence variant affecting polypeptide amino acid sequence","type":"exact"}],"termid":"SO:1000105"}


id: GO:0002875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chronic inflammatory response","termid":"GO:0002677"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response to antigenic stimulus","termid":"GO:0002862"},{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response to antigenic stimulus","termid":"GO:0002874"},{"relation_name":"negatively_regulates","term_name":"chronic inflammatory response to antigenic stimulus","termid":"GO:0002439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chronic inflammatory response to antigenic stimulus","synonyms":[{"name":"down regulation of chronic inflammatory response to antigenic stimulus","type":"exact"},{"name":"down-regulation of chronic inflammatory response to antigenic stimulus","type":"exact"},{"name":"downregulation of chronic inflammatory response to antigenic stimulus","type":"exact"},{"name":"inhibition of chronic inflammatory response to antigenic stimulus","type":"narrow"}],"termid":"GO:0002875"}


id: PBO:0049579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.3 histone B","termid":"PBO:0049579"}


id: GO:1902072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hypoxia-inducible factor-1alpha signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to hypoxia","termid":"GO:1900038"},{"relation_name":"is_a","term_name":"regulation of hypoxia-inducible factor-1alpha signaling pathway","termid":"GO:1902071"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"hypoxia-inducible factor-1alpha signaling pathway","termid":"GO:0097411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of hypoxia-inducible factor-1alpha signaling pathway","synonyms":[{"name":"down regulation of HIF1alpha pathway","type":"exact"},{"name":"down regulation of hypoxia-inducible factor-1alpha signaling pathway","type":"exact"},{"name":"down regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"down-regulation of HIF1alpha pathway","type":"exact"},{"name":"down-regulation of hypoxia-inducible factor-1alpha signaling pathway","type":"exact"},{"name":"down-regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"downregulation of HIF1alpha pathway","type":"exact"},{"name":"downregulation of hypoxia-inducible factor-1alpha signaling pathway","type":"exact"},{"name":"downregulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"inhibition of HIF1alpha pathway","type":"exact"},{"name":"inhibition of hypoxia-inducible factor-1alpha signaling pathway","type":"narrow"},{"name":"inhibition of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"negative regulation of HIF1alpha pathway","type":"exact"},{"name":"negative regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"}],"termid":"GO:1902072"}


id: GO:0009435
data:
  {"annotated_genes":["SJAG_02618","SJAG_00957","SJAG_01359","SJAG_01500","SJAG_03298","SJAG_04693","SJAG_02889"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96163,113378],"is_not":false,"summary":null,"term":"GO:0009435"},{"annotations":[109189,86764,87174,95441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[85145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["ISBN:0618254153","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide biosynthetic process","termid":"GO:0019359"},{"relation_name":"is_a","term_name":"NAD metabolic process","termid":"GO:0019674"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01500":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"NAD biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006736"],"synonyms":[{"name":"NAD (oxidized) biosynthesis","type":"exact"},{"name":"NAD (oxidized) biosynthetic process","type":"exact"},{"name":"NAD (reduced) biosynthesis","type":"exact"},{"name":"NAD (reduced) biosynthetic process","type":"exact"},{"name":"NAD anabolism","type":"exact"},{"name":"NAD biosynthesis","type":"exact"},{"name":"NAD formation","type":"exact"},{"name":"NAD synthesis","type":"exact"},{"name":"NADH biosynthesis","type":"exact"},{"name":"NADH biosynthetic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"nicotinamide adenine dinucleotide biosynthetic process","type":"exact"},{"name":"oxidized NAD biosynthesis","type":"exact"},{"name":"oxidized NAD biosynthetic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide biosynthetic process","type":"exact"},{"name":"reduced NAD biosynthesis","type":"exact"},{"name":"reduced NAD biosynthetic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide biosynthetic process","type":"exact"}],"termid":"GO:0009435","terms_by_termid":{"GO:0009435":null,"GO:0034355":null,"GO:0034356":null}}


id: PBO:0087331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting nexin family member; required for the cytoplasm-to-vacuole targeting (Cvt) pathway, endosomal sorting and selective autophagy; has a Phox homology domain that binds phosphatidylinositol-3-phosphate; interacts with Snx4p; potential Cdc28p substrate","termid":"PBO:0087331"}


id: PBO:0014249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seh1-associated complex subunity Seh1","termid":"PBO:0014249"}


id: PBO:0071786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribophorin II","termid":"PBO:0071786"}


id: RO:0002001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aligned_with","termid":"RO:0002001"}


id: PBO:0080118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitously expressed prefoldin like chaperone","termid":"PBO:0080118"}


id: GO:0071497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a freezing stimulus, temperatures below 0 degrees Celsius.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to freezing","termid":"GO:0050826"},{"relation_name":"is_a","term_name":"cellular response to cold","termid":"GO:0070417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to freezing","synonyms":[{"name":"antifreeze activity","type":"related"},{"name":"ice nucleation inhibitor activity","type":"related"}],"termid":"GO:0071497"}


id: PBO:0025431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-I ortholog Mis6","termid":"PBO:0025431"}


id: PR:Q9URX6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L31 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10956:SF0","OMA:SCHPO02089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.08","secondary_identifiers":["UniProtKB:Q9URX6"],"synonyms":[{"name":"Spom972h-RPL31","type":"exact"}],"termid":"PR:Q9URX6"}


id: PBO:0082385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 5 subunit of the 20S proteasome; responsible for the chymotryptic activity of the proteasome","termid":"PBO:0082385"}


id: PBO:0068864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 104, pseudogene","termid":"PBO:0068864"}


id: PBO:0067241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 313, pseudogene","termid":"PBO:0067241"}


id: PBO:0084563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-bound peptidyl-prolyl cis-trans isomerase (PPIase); binds to the drugs FK506 and rapamycin; expression pattern suggests possible involvement in ER protein trafficking; relocalizes from nucleus to vacuole upon DNA replication stress; mutation is functionally complemented by human FKBP2","termid":"PBO:0084563"}


id: GO:0032928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of enzymatic generation of superoxide by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide metabolic process","termid":"GO:0090322"},{"relation_name":"regulates","term_name":"superoxide anion generation","termid":"GO:0042554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of superoxide anion generation","synonyms":[{"name":"regulation of superoxide release","type":"exact"}],"termid":"GO:0032928"}


id: PBO:0065065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteoglycan 3, pro eosinophil major basic protein 2","termid":"PBO:0065065"}


id: PBO:0038646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA oxidase 1","termid":"PBO:0038646"}


id: PBO:0081765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 696","termid":"PBO:0081765"}


id: PBO:0034590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_meiosis_II","termid":"PBO:0034590"}


id: PBO:0031129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-genome_stability_defects_(obsolete_FYPO:0000241)","termid":"PBO:0031129"}


id: PATO:0000642
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being merged with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fused with","synonyms":[{"name":"coalesced","type":"related"},{"name":"fused","type":"exact"},{"name":"fused to","type":"exact"},{"name":"joined with","type":"related"},{"name":"merged with","type":"related"}],"termid":"PATO:0000642"}


id: PBO:0002410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zf-C2H2 type (predicted)","termid":"PBO:0002410"}


id: PBO:0034800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress associated Endoplasmic Reticulum protein Tam14","termid":"PBO:0034800"}


id: GO:0000973
data:
  {"annotated_genes":["SJAG_03299","SJAG_04347","SJAG_04148","SJAG_00298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68840,85133,98064,106518],"is_not":false,"summary":null,"term":"GO:0000973"}]},"cv_name":"biological_process","definition":"The chromosome organization process in which the DNA sequence containing a gene transcribed by RNA polymerase II is maintained in a specific location at the nuclear periphery even after transcription has been repressed.","definition_xrefs":["GOC:krc","PMID:17373856","PMID:18614049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery","termid":"GO:0000972"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00298":null,"SJAG_03299":null,"SJAG_04148":null,"SJAG_04347":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery","type":"exact"}],"termid":"GO:0000973","terms_by_termid":{"GO:0000973":null}}


id: PBO:0072377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 3","termid":"PBO:0072377"}


id: PBO:0027090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_cell_death_during_mitosis","termid":"PBO:0027090"}


id: GO:2000325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ligand-dependent nuclear receptor transcription coactivator activity.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nuclear receptor coactivator activity (obsolete GO:2000325)","synonyms":[{"name":"regulation of ligand-dependent nuclear receptor transcription co-activator activity","type":"exact"},{"name":"regulation of ligand-dependent nuclear receptor transcription coactivator activity","type":"exact"},{"name":"regulation of nuclear receptor transcription coactivator activity","type":"exact"}],"termid":"GO:2000325"}


id: PBO:0045100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMAC1 pseudogene 1","termid":"PBO:0045100"}


id: FYPO:0006640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is abnormal during anaphase B of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to mitotic spindle pole body during anaphase B","synonyms":[{"name":"abnormal protein localisation to mitotic spindle pole body during anaphase B","type":"exact"},{"name":"abnormal protein localization to mitotic SPB during anaphase B","type":"exact"},{"name":"abnormal protein localization to spindle pole body during anaphase B during vegetative growth","type":"exact"},{"name":"abnormal protein localization to spindle pole body during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0006640"}


id: PBO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyamine N-acetyltransferase (predicted)","termid":"PBO:0000988"}


id: PBO:0003484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide N-glycanase (predicted)","termid":"PBO:0003484"}


id: GO:0038033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a vascular endothelial growth factor (VEGF) to its receptor on the surface of a cell, which activates or increases the frequency, rate or extent of endothelial cell chemotaxis.","definition_xrefs":["GOC:bf","GOC:BHF","GOC:rl","PMID:21245381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration by vascular endothelial growth factor signaling pathway","termid":"GO:0038089"},{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"},{"relation_name":"is_a","term_name":"positive regulation of endothelial cell chemotaxis","termid":"GO:2001028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway","synonyms":[{"name":"VEGF-VEGFR-induced endothelial cell chemotaxis","type":"exact"},{"name":"VEGF-mediated chemotactic endothelial cell migration","type":"broad"},{"name":"positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signalling pathway","type":"exact"},{"name":"positive regulation of endothelial cell chemotaxis by VEGF/VEGFR signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor receptor signaling pathway involved in endothelial cell chemotaxis","type":"related"}],"termid":"GO:0038033"}


id: GO:0042339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving keratan sulfate, a glycosaminoglycan with repeat units consisting of beta-1,4-linked D-galactopyranosyl-beta-(1,4)-N-acetyl-D-glucosamine 6-sulfate and with variable amounts of fucose, sialic acid and mannose units; keratan sulfate chains are covalently linked by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylose to peptidyl-threonine or serine residues.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"mucopolysaccharide metabolic process","termid":"GO:1903510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"keratan sulfate metabolic process","synonyms":[{"name":"keratan sulfate metabolism","type":"exact"},{"name":"keratan sulphate metabolic process","type":"exact"},{"name":"keratan sulphate metabolism","type":"exact"}],"termid":"GO:0042339"}


id: FYPO:0003758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic spindle elongation begins, but mitotic sister chromatid segregation stops before completing separation of chromosomes.","definition_xrefs":["PMID:8978688","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"is_a","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"is_a","term_name":"incomplete mitotic sister chromatid segregation","termid":"FYPO:0003757"},{"relation_name":"output_of","term_name":"abnormal mitotic cell cycle arrest with replicated DNA","termid":"FYPO:0000444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0000337","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"mitotic spindle elongation without chromosome separation","synonyms":[{"name":"archery-bow phenotype","type":"exact"},{"name":"incomplete mitotic sister chromatid segregation, with elongated mitotic spindle and unseparated DNA","type":"exact"},{"name":"incomplete mitotic sister chromatid segregation, with unseparated DNA","type":"exact"},{"name":"incomplete mitotic sister chromatid separation, with unseparated DNA","type":"related"},{"name":"spindle elongation in absence of chromosome separation","type":"exact"},{"name":"spindle elongation without chromosome separation during mitotic cell cycle","type":"related"},{"name":"spindle elongation without chromosome separation during vegetative growth","type":"exact"}],"termid":"FYPO:0003758"}


id: PBO:0076502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 2, pseudogene","termid":"PBO:0076502"}


id: PBO:0086418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase; member of the Obg family; peripheral protein of the mitochondrial inner membrane that associates with the large ribosomal subunit; required for mitochondrial translation, possibly via a role in ribosome assembly","termid":"PBO:0086418"}


id: PR:P0C5Y7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ten1 gene.","definition_xrefs":["UniProtKB:P0C5Y7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ten1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.14","synonyms":[{"name":"Spom972h-ten1","type":"exact"}],"termid":"PR:P0C5Y7"}


id: PATO:0000317
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color that lacks any hues as parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"black","termid":"PATO:0000317"}


id: PBO:0064185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLA2G10 pseudogene 1","termid":"PBO:0064185"}


id: PBO:0075387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP2 antisense RNA 1","termid":"PBO:0075387"}


id: PBO:0110049
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial MICOS interactor required for Cristae morphology","termid":"PBO:0110049"}


id: GO:0046970
data:
  {"annotated_genes":["SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100300],"is_not":false,"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 16) + H2O = histone H4 L-lysine (position 16) + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from lysine at position 16 of the histone H4 protein.","definition_xrefs":["PMID:28450737","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent histone deacetylase activity","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H4K16 deacetylase activity","termid":"GO:0034739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0033558"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810","GO:0033558","GO:0140096","GO:0019213"],"is_obsolete":false,"name":"NAD-dependent histone H4K16 deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone H4-K16 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H4-K16 specific)","type":"exact"}],"termid":"GO:0046970","terms_by_termid":{"GO:0046970":null}}


id: GO:0045860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein kinase activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"positive regulation of kinase activity","termid":"GO:0033674"},{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein kinase activity","synonyms":[{"name":"stimulation of protein kinase activity","type":"narrow"},{"name":"up regulation of protein kinase activity","type":"exact"},{"name":"up-regulation of protein kinase activity","type":"exact"},{"name":"upregulation of protein kinase activity","type":"exact"}],"termid":"GO:0045860"}


id: GO:0098821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a member of the bone morphogenetic protein (BMP) family, and transmitting a signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:BHF","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase activity","termid":"GO:0004675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0004672","GO:0038023","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"BMP receptor activity","termid":"GO:0098821"}


id: GO:0062146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chloro-L-lysine + AH2 + O2 = A + formaldehyde + H2O + L-2-amino-4-chloropent-4-enoate + NH4(+).","definition_xrefs":["PMID:30867596","RHEA:59888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-chloro-allylglycine synthase activity","termid":"GO:0062146"}


id: PBO:0048593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone 2","termid":"PBO:0048593"}


id: PBO:0034509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exocytic_vesicles_present_in_increased_numbers_at_cell_tip_during_mitotic_interphase","termid":"PBO:0034509"}


id: PBO:0004935
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.48","termid":"PBO:0004935"}


id: GO:0070674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hypoxanthine + NAD+ + H2O = xanthine + NADH + H+.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor","termid":"GO:0016726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hypoxanthine dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-9727347"],"synonyms":[{"name":"NAD-hypoxanthine dehydrogenase activity","type":"related"},{"name":"hypoxanthine oxidoreductase activity","type":"broad"},{"name":"hypoxanthine-NAD oxidoreductase activity","type":"related"},{"name":"hypoxanthine/NAD(+) oxidoreductase activity","type":"related"},{"name":"hypoxanthine/NAD+ oxidoreductase activity","type":"related"},{"name":"hypoxanthine:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0070674"}


id: PBO:0090666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GIDA family tRNA uridine 5-carboxymethylaminomethyl modification enzyme Ips1","termid":"PBO:0090666"}


id: PR:O94424
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIF subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02358","PANTHER:PTHR10445:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIF subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.13c","secondary_identifiers":["UniProtKB:O94424"],"synonyms":[{"name":"ATP-dependent helicase TFG2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GTF2F2","type":"exact"},{"name":"TFIIF medium subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TFIIF-beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94424"}


id: PBO:0085390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane low glucose sensor, regulates glucose transport; high affinity sensor that contains 12 predicted transmembrane segments and a long C-terminal tail required for induction of hexose transporters; also senses fructose and mannose; SNF3 has a paralog, RGT2, that arose from the whole genome duplication","termid":"PBO:0085390"}


id: PATO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being arranged in a systematic fashion.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organization quality","termid":"PATO:0002264"}


id: GO:0106244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8beta-hydroxygermacra-1(10),4,11(13)-trien-12-oate + O2 + reduced [NADPH--hemoprotein reductase] = eupatolide + 2 H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["GOC:eab","RHEA:57972","PMID:29758164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"eupatolide synthase activity","secondary_identifiers":["EC:1.14.14.169"],"termid":"GO:0106244"}


id: PBO:0046136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A2","termid":"PBO:0046136"}


id: PBO:0061219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 10","termid":"PBO:0061219"}


id: FYPO:0000633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to G418. Cells stop growing (and may die) at a concentration of G418 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to G418","synonyms":[{"name":"hypersensitive to G418","type":"exact"},{"name":"sensitive to G418 during mitotic cell cycle","type":"related"},{"name":"sensitive to G418 during vegetative growth","type":"exact"},{"name":"sensitive to Geneticin","type":"exact"}],"termid":"FYPO:0000633"}


id: PBO:0081614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 542, pseudogene","termid":"PBO:0081614"}


id: PBO:0080888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH N6-methyladenosine RNA binding protein C1","termid":"PBO:0080888"}


id: PBO:0050597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta, pseudogene 2","termid":"PBO:0050597"}


id: PBO:0089480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog5","termid":"PBO:0089480"}


id: PBO:0087372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Squalene epoxidase; catalyzes the epoxidation of squalene to 2,3-oxidosqualene; plays an essential role in the ergosterol-biosynthesis pathway and is the specific target of the antifungal drug terbinafine; human SQLE functionally complements the lethality of the erg1 null mutation","termid":"PBO:0087372"}


id: PBO:0059790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 16","termid":"PBO:0059790"}


id: PR:Q9P7X5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk32 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7X5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain-containing protein ppk32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.10","synonyms":[{"name":"Spom972h-ppk32","type":"exact"}],"termid":"PR:Q9P7X5"}


id: PBO:0041232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 54","termid":"PBO:0041232"}


id: PBO:0053668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 847","termid":"PBO:0053668"}


id: PBO:0044352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 39","termid":"PBO:0044352"}


id: GO:0045709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of salivary gland determination in an adult organism.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of salivary gland boundary specification","termid":"GO:0045705"},{"relation_name":"is_a","term_name":"regulation of adult salivary gland boundary specification","termid":"GO:0045707"},{"relation_name":"negatively_regulates","term_name":"adult salivary gland boundary specification","termid":"GO:0007434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adult salivary gland boundary specification","synonyms":[{"name":"down regulation of adult salivary gland determination","type":"exact"},{"name":"down-regulation of adult salivary gland determination","type":"exact"},{"name":"downregulation of adult salivary gland determination","type":"exact"},{"name":"inhibition of adult salivary gland determination","type":"narrow"},{"name":"negative regulation of adult salivary gland determination","type":"exact"}],"termid":"GO:0045709"}


id: PBO:0090798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Yar1","termid":"PBO:0090798"}


id: PBO:0073407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 10","termid":"PBO:0073407"}


id: GO:0043160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the acrosome membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"is_a","term_name":"lysosomal lumen","termid":"GO:0043202"},{"relation_name":"part_of","term_name":"acrosomal vesicle","termid":"GO:0001669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"acrosomal lumen","termid":"GO:0043160"}


id: GO:0031778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 melanin-concentrating hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanin-concentrating hormone receptor binding","termid":"GO:0031776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 2 melanin-concentrating hormone receptor binding","synonyms":[{"name":"type 2 melanin-concentrating hormone receptor ligand","type":"narrow"}],"termid":"GO:0031778"}


id: PBO:0041977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 18","termid":"PBO:0041977"}


id: PBO:0045361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double PHD fingers 1","termid":"PBO:0045361"}


id: PBO:0036300
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital sideroblastic anemia","termid":"PBO:0036300"}


id: PBO:0027639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spindle","termid":"PBO:0027639"}


id: GO:0046056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dADP, deoxyadenosine diphosphate (2'-deoxyadenosine 5'-diphosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dADP metabolic process","synonyms":[{"name":"dADP metabolism","type":"exact"}],"termid":"GO:0046056"}


id: GO:0061537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of glycine by a cell, in which glycine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"glycine secretion","termid":"GO:0061536"},{"relation_name":"part_of","term_name":"synaptic transmission, glycinergic","termid":"GO:0060012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glycine secretion, neurotransmission","termid":"GO:0061537"}


id: GO:1900298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hexasaccharide transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of hexasaccharide transport","termid":"GO:1900297"},{"relation_name":"negatively_regulates","term_name":"hexasaccharide transport","termid":"GO:2001102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hexasaccharide transport","synonyms":[{"name":"down regulation of hexasaccharide transport","type":"exact"},{"name":"down-regulation of hexasaccharide transport","type":"exact"},{"name":"downregulation of hexasaccharide transport","type":"exact"},{"name":"inhibition of hexasaccharide transport","type":"narrow"}],"termid":"GO:1900298"}


id: GO:0002713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte mediated immunity","termid":"GO:0002707"},{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"},{"relation_name":"negatively_regulates","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell mediated immunity","synonyms":[{"name":"down regulation of B cell mediated immunity","type":"exact"},{"name":"down-regulation of B cell mediated immunity","type":"exact"},{"name":"downregulation of B cell mediated immunity","type":"exact"},{"name":"inhibition of B cell mediated immunity","type":"narrow"},{"name":"negative regulation of B lymphocyte mediated immunity","type":"exact"},{"name":"negative regulation of B-cell mediated immunity","type":"exact"},{"name":"negative regulation of B-lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0002713"}


id: GO:0051930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"sensory perception of pain","termid":"GO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception of pain","termid":"GO:0051930"}


id: GO:0008751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)H dehydrogenase (obsolete GO:0008751)","synonyms":[{"name":"NAD(P)H dehydrogenase","type":"exact"}],"termid":"GO:0008751"}


id: PBO:0066989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 292","termid":"PBO:0066989"}


id: PBO:0041470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 24","termid":"PBO:0041470"}


id: PBO:0011434
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae LHP1","termid":"PBO:0011434"}


id: FYPO:0006578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is normal (i.e. indistinguishable from wild type). The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000257","FYPO:0001312","FYPO:0000298","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic G2 DNA damage checkpoint","synonyms":[{"name":"normal G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint activation","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0006578"}


id: PBO:0043772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX20 pseudogene 1","termid":"PBO:0043772"}


id: GO:1990860
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cyclin dependent kinase (CDK) complex that contains a kinase subunit and a regulatory cyclin subunit. An example of this complex in budding yeast S. cerevisiae consists of the Pho85 kinase and the Pho80 cyclin.","definition_xrefs":["GOC:rb","PMID:8108735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Pho85-Pho80 CDK-cyclin complex","termid":"GO:1990860"}


id: PBO:0055447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2878","termid":"PBO:0055447"}


id: GO:0033552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B3 stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B3","synonyms":[{"name":"response to niacin","type":"narrow"},{"name":"response to nicotinamide","type":"narrow"}],"termid":"GO:0033552"}


id: PBO:0082299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aromatic aminotransferase II; catalyzes the first step of tryptophan, phenylalanine, and tyrosine catabolism; involved with Aro8p in production of kynurenic acid to detoxify excess tryptophan","termid":"PBO:0082299"}


id: MOD:00490
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDT-iodo-PEO-biotin","synonyms":[{"name":"EDT-iodo-PEO-biotin","type":"related"},{"name":"EDT-iodoacetyl-PEO-biotin","type":"related"}],"termid":"MOD:00490"}


id: PBO:0005381
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombe glycoprotease","termid":"PBO:0005381"}


id: FYPO:0005105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which Lys63-specific deubiquitinase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished peptidase activity","termid":"FYPO:0000669"},{"relation_name":"is_a","term_name":"abnormal Lys63-specific deubiquitinase activity","termid":"FYPO:0005104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abolished Lys63-specific deubiquitinase activity","synonyms":[{"name":"Lys63-specific deubiquitinase activity abolished","type":"exact"}],"termid":"FYPO:0005105"}


id: PBO:0079824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-51 like kinase 3","termid":"PBO:0079824"}


id: GO:0140543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the synthesis of piRNA.","definition_xrefs":["PMID:28847004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of piRNA transcription","termid":"GO:0140542"},{"relation_name":"positively_regulates","term_name":"piRNA transcription","termid":"GO:0140541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of piRNA transcription","termid":"GO:0140543"}


id: PBO:0044181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin delta 1","termid":"PBO:0044181"}


id: FYPO:0006104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of retrotransposon integration is decreased.","definition_xrefs":["PMID:26358720","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transposition","termid":"FYPO:0000591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased retrotransposon integration","synonyms":[{"name":"decreased retrotransposon integration during mitotic cell cycle","type":"related"},{"name":"decreased retrotransposon integration during vegetative growth","type":"exact"},{"name":"decreased transposon integration involved in RNA-mediated transposition","type":"exact"},{"name":"reduced retrotransposon integration","type":"exact"}],"termid":"FYPO:0006104"}


id: GO:0003232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the bulbus arteriosus over time, from its formation to the mature structure. The bulbus arteriosus is an elastic heart chamber.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bulbus arteriosus development","termid":"GO:0003232"}


id: PBO:0046740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXO5 divergent transcript","termid":"PBO:0046740"}


id: GO:0003343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the septum transversum from its initial formation to the mature structure. The septum transversum is a portion of the trunk mesenchyme.","definition_xrefs":["PMID:18722343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"septum transversum development","termid":"GO:0003343"}


id: GO:0018578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxybenzoate + O2 = 3-carboxy-cis,cis-muconate.","definition_xrefs":["EC:1.13.11.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"protocatechuate 3,4-dioxygenase activity","secondary_identifiers":["RHEA:10084","UM-BBD_reactionID:r0143","MetaCyc:PROTOCATECHUATE-34-DIOXYGENASE-RXN"],"synonyms":[{"name":"protocatechuate oxygenase activity","type":"broad"},{"name":"protocatechuate:oxygen 3,4-oxidoreductase (decyclizing)","type":"related"},{"name":"protocatechuic 3,4-dioxygenase activity","type":"related"},{"name":"protocatechuic 3,4-oxygenase activity","type":"related"},{"name":"protocatechuic acid oxidase activity","type":"related"}],"termid":"GO:0018578"}


id: PBO:0003193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear membrane organization protein Apq12 (predicted)","termid":"PBO:0003193"}


id: PBO:0060960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor zeta","termid":"PBO:0060960"}


id: GO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme MAP kinase (MAPK).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK activity (obsolete GO:0000187)","synonyms":[{"name":"MAPK activation","type":"exact"},{"name":"activation of MAP kinase","type":"exact"},{"name":"activation of MAPK activity during sporulation","type":"narrow"}],"termid":"GO:0000187"}


id: PBO:0064060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 94","termid":"PBO:0064060"}


id: PBO:0045814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 4","termid":"PBO:0045814"}


id: PBO:0072630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and SPRY domain containing 1","termid":"PBO:0072630"}


id: MOD:01705
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrogen with an isotope tagged reagent acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}


id: PBO:0036262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit Rna14","termid":"PBO:0036262"}


id: GO:1990173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the nucleoplasm.","definition_xrefs":["GOC:mah","PMID:22918952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to nucleoplasm","secondary_identifiers":["GO:0032066"],"synonyms":[{"name":"nucleolus to nucleoplasm transport","type":"related"},{"name":"protein localisation to nucleoplasm","type":"exact"}],"termid":"GO:1990173"}


id: PBO:0057931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3658","termid":"PBO:0057931"}


id: PBO:0076797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEF transcription factor, PAR bZIP family member","termid":"PBO:0076797"}


id: PBO:0004189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Spc24","termid":"PBO:0004189"}


id: GO:0036055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N(6)-succinyl-L-lysyl-[protein] + NAD+ = 2''-O-succinyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["PMID:22076378","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"protein-succinyllysine desuccinylase activity","secondary_identifiers":["RHEA:47668"],"synonyms":[{"name":"peptidyl-succinyllysine desuccinylase activity","type":"exact"},{"name":"succinyl lysine desuccinylase activity","type":"broad"},{"name":"succinyllysine desuccinylase activity","type":"broad"}],"termid":"GO:0036055"}


id: PBO:0003047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric-chelate reductase Frp1","termid":"PBO:0003047"}


id: PATO:0000980
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000980 absolute porosity value (obsolete PATO:0000980)","termid":"PATO:0000980"}


id: GO:0006072
data:
  {"annotated_genes":["SJAG_00409","SJAG_01012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102580,90081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046168"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol phosphate metabolic process","termid":"GO:0052646"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycerol-3-phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycerol-3-phosphate metabolism","type":"exact"}],"termid":"GO:0006072","terms_by_termid":{"GO:0046168":null}}


id: FYPO:0004599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA replication is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of DNA replication during vegetative growth","synonyms":[{"name":"increased rate of DNA replication during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004599"}


id: PBO:0042846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP53 pseudogene 1","termid":"PBO:0042846"}


id: GO:0102833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1D-5-O-methyl-myo-inositol + alpha-D-galactosyl-(1->3)-1D-myo-inositol = D-galactosylononitol + myo-inositol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sequoyitol galactinol:D-galactosylononitol galactosyltransferase activity (obsolete GO:0102833)","termid":"GO:0102833"}


id: PBO:0059731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 5","termid":"PBO:0059731"}


id: PBO:0064235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C like 2","termid":"PBO:0064235"}


id: PBO:0041426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 48","termid":"PBO:0041426"}


id: PBO:0110342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 4B (Chido/Rodgers blood group), copy 2","termid":"PBO:0110342"}


id: GO:0015331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the stereospecific transfer of asparagine or glutamine across a biological membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete asparagine/glutamine permease activity (obsolete GO:0015331)","synonyms":[{"name":"asparagine/glutamine permease activity","type":"exact"}],"termid":"GO:0015331"}


id: PBO:0060156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 4 (pseudogene)","termid":"PBO:0060156"}


id: PR:Q9UU87
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase STK11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.01","secondary_identifiers":["UniProtKB:Q9UU87"],"synonyms":[{"name":"SPCC1919.01","type":"related"},{"name":"Spom972h-STK11","type":"exact"}],"termid":"PR:Q9UU87"}


id: GO:1990600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Increases the activity of a single-stranded DNA endodeoxyribonuclease activator activity.","definition_xrefs":["PMID:25203555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease activator activity","termid":"GO:0140656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"single-stranded DNA endodeoxyribonuclease activator activity","termid":"GO:1990600"}


id: GO:0042020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-23 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-23 receptor activity","synonyms":[{"name":"IL-23 receptor activity","type":"exact"},{"name":"IL-23R","type":"exact"}],"termid":"GO:0042020"}


id: PBO:0085463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted tail-anchored plasma membrane protein; contains a conserved CYSTM module; related proteins in other organisms may be involved in response to stress; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery","termid":"PBO:0085463"}


id: PBO:0042130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil glutamate rich protein 1","termid":"PBO:0042130"}


id: PBO:0043607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic oncogenic antisense to MET transcript","termid":"PBO:0043607"}


id: GO:0004210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-7 activity (obsolete GO:0004210)","synonyms":[{"name":"caspase-7 activity","type":"exact"}],"termid":"GO:0004210"}


id: GO:0052125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near its host organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis on or near host (obsolete GO:0052125)","termid":"GO:0052125"}


id: GO:0071302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B2 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin B2","termid":"GO:0033274"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B2","synonyms":[{"name":"cellular response to riboflavin","type":"exact"}],"termid":"GO:0071302"}


id: GO:0075070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a hyphopodium of the symbiont to its host via adhesion molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont infection structure to host","termid":"GO:0075001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont hyphopodium to host","synonyms":[{"name":"adhesion of symbiont hyphopodium to host during symbiotic interaction","type":"exact"}],"termid":"GO:0075070"}


id: GO:0070918
data:
  {"annotated_genes":["SJAG_02621","SJAG_02622","SJAG_01836","SJAG_01867","SJAG_03356","SJAG_02817","SJAG_04942"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114153,103876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990431"},{"annotations":[114179,87964,88921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043628"},{"annotations":[114156,103878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990432"},{"annotations":[95662,105212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030422"}]},"cv_name":"biological_process","definition":"A process leading to the generation of a functional regulatory non-coding RNA.","definition_xrefs":["GOC:mah","PMID:15196465","PMID:19239886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"part_of","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01836":null,"SJAG_01867":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02817":null,"SJAG_03356":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulatory ncRNA processing","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0031051"],"synonyms":[{"name":"gene silencing by RNA, production of guide RNA","type":"narrow"},{"name":"gene silencing by RNA, production of small RNA","type":"narrow"},{"name":"primary sncRNA processing","type":"narrow"},{"name":"production of small RNA involved in gene silencing by RNA","type":"narrow"},{"name":"small regulatory ncRNA maturation","type":"narrow"},{"name":"small regulatory ncRNA processing","type":"narrow"},{"name":"sncRNA processing","type":"narrow"},{"name":"sncRNA production","type":"narrow"}],"termid":"GO:0070918","terms_by_termid":{"GO:0030422":null,"GO:0043628":null,"GO:1990431":null,"GO:1990432":null}}


id: PBO:0062353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily N member 1","termid":"PBO:0062353"}


id: GO:0001882
data:
  {"annotated_genes":["SJAG_04410","SJAG_00637","SJAG_04030","SJAG_03578"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905108"},{"annotations":[90201,109240,94263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032549"}]},"cv_name":"molecular_function","definition":"Binding to a nucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked either to ribose or deoxyribose.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_03578":null,"SJAG_04030":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nucleoside binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001882","terms_by_termid":{"GO:0032549":null,"GO:1905108":null}}


id: GO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A punctate, filamentous structure composed of Bcl10 that appears in the cytoplasm of T-cells shortly after T-cell receptor stimulation. Polkadots stands for Punctate Oligomeric Killing and Activating DOmains Transducing Signals.","definition_xrefs":["PMID:16495340","PMID:14724296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"polkadots","termid":"GO:0002096"}


id: PBO:0067433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 554, pseudogene","termid":"PBO:0067433"}


id: PBO:0005288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain protein, implicated in translation","termid":"PBO:0005288"}


id: GO:0009233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of the menaquinones, quinone-derived compounds synthesized by intestinal bacteria. Structurally, menaquinones consist of a methylated naphthoquinone ring structure and side chains composed of a variable number of unsaturated isoprenoid residues. Menaquinones have vitamin K activity and are known as vitamin K2.","definition_xrefs":["PMID:6127606","GOC:jl","PMID:8642453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"menaquinone metabolic process","synonyms":[{"name":"menaquinone metabolism","type":"exact"},{"name":"menatetrenone metabolic process","type":"exact"},{"name":"menatetrenone metabolism","type":"exact"},{"name":"multiprenylmenaquinone metabolic process","type":"exact"},{"name":"multiprenylmenaquinone metabolism","type":"exact"},{"name":"vitamin K2 metabolic process","type":"exact"},{"name":"vitamin K2 metabolism","type":"exact"}],"termid":"GO:0009233"}


id: FYPO:0004746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly involved in chromatin silencing at the centromere outer repeat region does not occur.","definition_xrefs":["GO:0031507","PMID:24240238","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly at centromere outer repeat during vegetative growth","termid":"FYPO:0003098"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat","synonyms":[{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere otr","type":"exact"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at pericentric region","type":"related"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at pericentromeric region","type":"related"},{"name":"heterochromatin assembly involved in chromatin silencing at centromere outer repeat abolished","type":"exact"}],"termid":"FYPO:0004746"}


id: GO:0052707
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99730],"is_not":false,"summary":null,"term":"GO:0052707"}]},"cv_name":"biological_process","definition":"The pathway resulting in the formation of N-alpha,N-alpha,N-alpha-trimethyl-L-histidine from histidine. Histidine undergoes three methylations by a histidine-alpha-N-methyltransferase (EC:2.1.1.44) to form N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (also known as hercynine or histidine betaine).","definition_xrefs":["EC:2.1.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine metabolic process","termid":"GO:0006547"},{"relation_name":"is_a","term_name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthetic process","termid":"GO:0052709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthesis from histidine","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01169"],"synonyms":[{"name":"hercynine biosynthesis from histidine","type":"exact"},{"name":"histidine betaine biosynthesis from histidine","type":"exact"},{"name":"histidine catabolic process to hercynine","type":"exact"},{"name":"histidine catabolism to N-alpha,N-alpha,N-alpha-trimethyl-L-histidine","type":"exact"},{"name":"histidine catabolism to hercynine","type":"exact"}],"termid":"GO:0052707","terms_by_termid":{"GO:0052707":null}}


id: FYPO:0002462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, septated, and elongated.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"branched, elongated, septated cell","termid":"FYPO:0004594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"inviable branched, elongated vegetative cell","secondary_identifiers":["FYPO:0002461"],"synonyms":[{"name":"inviable branched cell during vegetative growth","type":"exact"},{"name":"inviable branched vegetative cell","type":"exact"},{"name":"inviable branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated cell during vegetative growth","type":"exact"},{"name":"inviable branched, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated, septated cell","type":"exact"},{"name":"inviable branched, long, septated cell","type":"exact"},{"name":"inviable branched, septated cell","type":"exact"},{"name":"inviable elongated branched cell","type":"exact"},{"name":"lethal; branched, elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002462"}


id: PBO:0108706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex WD repeat subunit Ski8","termid":"PBO:0108706"}


id: GO:0061055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the myotome over time, from its formation to the mature structure. The myotome is the portion of the somite that will give rise to muscle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"somite development","termid":"GO:0061053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myotome development","termid":"GO:0061055"}


id: PBO:0052680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 48","termid":"PBO:0052680"}


id: PBO:0058881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10397","termid":"PBO:0058881"}


id: PBO:0049132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPRIN family member 3","termid":"PBO:0049132"}


id: PBO:0040418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c pseudogene 3","termid":"PBO:0040418"}


id: PBO:0054138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1504","termid":"PBO:0054138"}


id: GO:0102433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + O2 + an N10-formyl-tetrahydrofolate = L-tyrosine + a 10-formyltetrahydrofolate-4a-carbinolamine.","definition_xrefs":["GOC:pz","EC:1.14.16.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","termid":"GO:0016714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenylalanine 4-hydroxylase (N10-formyl-tetrahydrofolate dependent) activity","secondary_identifiers":["MetaCyc:RXN-13907"],"termid":"GO:0102433"}


id: SO:0000196
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the five_prime_coding_exon that codes for protein.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_region_of_exon","termid":"SO:0001215"},{"relation_name":"part_of","term_name":"five_prime_coding_exon","termid":"SO:0000200"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_coding_exon_coding_region","synonyms":[{"name":"five prime exon coding region","type":"exact"}],"termid":"SO:0000196"}


id: GO:0048452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the petal. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ structural organization","termid":"GO:0048450"},{"relation_name":"part_of","term_name":"petal morphogenesis","termid":"GO:0048446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal structural organization","secondary_identifiers":["GO:0048420"],"synonyms":[{"name":"petal structural organisation","type":"exact"}],"termid":"GO:0048452"}


id: PBO:0071479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 20","termid":"PBO:0071479"}


id: FYPO:0003137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle pole bodies are normal (i.e. indistinguishable from wild type) with respect to structure, composition, location, and orientation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal spindle pole body","termid":"FYPO:0005379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic spindle pole body","synonyms":[{"name":"normal mitotic SPB","type":"exact"},{"name":"normal mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"normal spindle pole body during mitosis","type":"exact"},{"name":"normal spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0003137"}


id: PBO:0086211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds eIF4G and has a role in repression of translation; has an RGG motif; found in cytoplasmic P bodies; binds to mRNAs under glucose starvation stress, most often in the 5' UTR; found associated with small nucleolar RNAs snR10 and snR11; SBP1 has a paralog, RNP1, that arose from the whole genome duplication","termid":"PBO:0086211"}


id: GO:0052495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within its second organism's vascular system, the vessels and tissue that carry or circulate fluids, such as blood, lymph or sap, through the body of an animal or plant, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by organism of vascular system in other organism involved in symbiotic interaction (obsolete GO:0052495)","synonyms":[{"name":"occlusion by organism of vascular system in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052495"}


id: PATO:0000895
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000895 f1 fertility value (obsolete PATO:0000895)","termid":"PATO:0000895"}


id: PBO:0005206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin (predicted)","termid":"PBO:0005206"}


id: FYPO:0007806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a endodeoxyribonuclease activator is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:33836577","PomBase:mah","GO:0140656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal endodeoxyribonuclease activator activity","termid":"FYPO:0007806"}


id: PATO:0000597
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000597 absolute width value (obsolete PATO:0000597)","termid":"PATO:0000597"}


id: PBO:0088743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L26","termid":"PBO:0088743"}


id: PBO:0050304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 6","termid":"PBO:0050304"}


id: PBO:0072177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 4","termid":"PBO:0072177"}


id: PBO:0086565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR320W is not an essential gene","termid":"PBO:0086565"}


id: PBO:0007962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotyrosyl phosphatase activator Ypa2","termid":"PBO:0007962"}


id: GO:0006881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining iron ions in an extracellular area such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of iron ion","termid":"GO:0097577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"extracellular sequestering of iron ion","synonyms":[{"name":"extracellular iron ion retention","type":"exact"},{"name":"extracellular iron ion sequestering","type":"exact"},{"name":"extracellular iron ion sequestration","type":"exact"},{"name":"extracellular iron ion storage","type":"exact"},{"name":"extracellular retention of iron ion","type":"exact"},{"name":"extracellular sequestration of iron ion","type":"exact"},{"name":"extracellular storage of iron ion","type":"exact"}],"termid":"GO:0006881"}


id: GO:0004504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-glycine + ascorbate + O2 = peptidyl(2-hydroxyglycine) + dehydroascorbate + H2O.","definition_xrefs":["EC:1.14.17.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen","termid":"GO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"peptidylglycine monooxygenase activity","secondary_identifiers":["RHEA:21452","MetaCyc:PEPTIDYLGLYCINE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"PAM activity","type":"related"},{"name":"PAM-A","type":"related"},{"name":"PAM-B","type":"related"},{"name":"peptide alpha-amidating enzyme","type":"related"},{"name":"peptide alpha-amide synthase activity","type":"related"},{"name":"peptide-alpha-amide synthetase activity","type":"related"},{"name":"peptidyl alpha-amidating enzyme activity","type":"related"},{"name":"peptidylglycine 2-hydroxylase activity","type":"exact"},{"name":"peptidylglycine alpha-amidating monooxygenase activity","type":"related"},{"name":"peptidylglycine alpha-hydroxylase activity","type":"related"},{"name":"peptidylglycine,ascorbate:oxygen oxidoreductase (2-hydroxylating)","type":"related"},{"name":"synthase, peptide alpha-amide","type":"related"}],"termid":"GO:0004504"}


id: PBO:0013120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Dbl5","termid":"PBO:0013120"}


id: PBO:0061539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP2/Sun RNA methyltransferase 4","termid":"PBO:0061539"}


id: PBO:0027592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_tyrosine_phosphorylation_during_vegetative_growth","termid":"PBO:0027592"}


id: GO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Lys(or Arg)-Ile bond in complement subcomponent C1s to form the active form of C1s (EC:3.4.21.42).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete complement component C1r activity (obsolete GO:0003815)","synonyms":[{"name":"C1r esterase activity","type":"related"},{"name":"activated complement C1r","type":"related"},{"name":"complement component C1r activity","type":"exact"},{"name":"complement subcomponent C1r","type":"related"}],"termid":"GO:0003815"}


id: PBO:0038705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin epsilon 1, pseudogene","termid":"PBO:0038705"}


id: PBO:0059455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 5","termid":"PBO:0059455"}


id: SO:0000097
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from nucleomorph sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"nucleomorphic_sequence","termid":"SO:0000739"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleomorph_gene","synonyms":[{"name":"nucleomorph gene","type":"exact"}],"termid":"SO:0000097"}


id: PBO:0043562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 1 chain","termid":"PBO:0043562"}


id: PBO:0042835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP20DC antisense RNA 1","termid":"PBO:0042835"}


id: GO:0141077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or disrupts an interferon-mediated signaling in the host organism.","definition_xrefs":["PMID:31266861","PMID:34305858"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression of host interferon-mediated signaling pathway (obsolete GO:0141077)","synonyms":[{"name":"inhibition of host interferon signaling pathway","type":"related"},{"name":"negative regulation of host interferon-mediated signaling pathway","type":"exact"},{"name":"suppression of host IFN-mediated signaling pathway","type":"exact"},{"name":"suppression of host interferon-mediated signaling pathway","type":"narrow"},{"name":"symbiont-mediated of host interferon-mediated signaling pathway","type":"related"}],"termid":"GO:0141077"}


id: SO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short, non coding transcript of loop-derived sequences encoded in precursor miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"},{"relation_name":"part_of","term_name":"pre_miRNA","termid":"SO:0001244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loR","synonyms":[{"name":"loop-origin miRs","type":"exact"}],"termid":"SO:0002033"}


id: PBO:0055767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucyl and cystinyl aminopeptidase","termid":"PBO:0055767"}


id: GO:0070457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose-1-phosphate + H2O = D-galactose + phosphate.","definition_xrefs":["GOC:mah","PMID:9462881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose-1-phosphate phosphatase activity","termid":"GO:0070456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"D-galactose-1-phosphate phosphatase activity","termid":"GO:0070457"}


id: PBO:0058437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5001","termid":"PBO:0058437"}


id: GO:0061110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a dense core granule. Includes biosynthesis of constituent macromolecules, and those macromolecular modifications that are involved in synthesis or assembly of the dense core granule.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"dense core granule biogenesis","termid":"GO:0061110"}


id: GO:0048550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pinocytosis. Pinocytosis is the process in which cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocytosis","termid":"GO:0045806"},{"relation_name":"is_a","term_name":"regulation of pinocytosis","termid":"GO:0048548"},{"relation_name":"negatively_regulates","term_name":"pinocytosis","termid":"GO:0006907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of pinocytosis","synonyms":[{"name":"inhibition of pinocytosis","type":"narrow"},{"name":"down regulation of pinocytosis","type":"exact"},{"name":"down-regulation of pinocytosis","type":"exact"},{"name":"downregulation of pinocytosis","type":"exact"}],"termid":"GO:0048550"}


id: PR:Q09818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mot2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general negative regulator of transcription C16C9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.04c","synonyms":[{"name":"Spom972h-mot2","type":"exact"}],"termid":"PR:Q09818"}


id: PBO:0077909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 antisense RNA 1","termid":"PBO:0077909"}


id: PBO:0060687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-deacetylase and N-sulfotransferase 2","termid":"PBO:0060687"}


id: PBO:0053788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1039","termid":"PBO:0053788"}


id: GO:0031414
data:
  {"annotated_genes":["SJAG_04631","SJAG_03045","SJAG_04179","SJAG_02726","SJAG_03215","SJAG_02920","SJAG_04131","SJAG_01826","SJAG_06449"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114049,112882,85515,106507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031415"},{"annotations":[111425,98661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031416"},{"annotations":[108882,101567,99681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031417"}]},"cv_name":"cellular_component","definition":"A complex that catalyzes the transfer of an acetyl group to the N-terminal residue of a protein acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetyltransferase complex","termid":"GO:0031248"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01826":null,"SJAG_02726":null,"SJAG_02920":null,"SJAG_03045":null,"SJAG_03215":null,"SJAG_04131":null,"SJAG_04179":null,"SJAG_04631":null,"SJAG_06449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"N-terminal protein acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAT complex","type":"exact"}],"termid":"GO:0031414","terms_by_termid":{"GO:0031415":null,"GO:0031416":null,"GO:0031417":null}}


id: SO:0000849
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A component of the three-prime long terminal repeat.","definition_xrefs":["PMID:8649407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_component","termid":"SO:0000848"},{"relation_name":"part_of","term_name":"three_prime_LTR","termid":"SO:0000426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_LTR_component","synonyms":[{"name":"3' long terminal repeat component","type":"exact"},{"name":"three prime LTR component","type":"exact"}],"termid":"SO:0000849"}


id: PBO:0083261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 100% of YLR465C overlaps the uncharacterized ORF YLR464W and 86% of YLR465C overlaps the verified gene YRF1-4","termid":"PBO:0083261"}


id: GO:0090679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell differentiation process that is a part of a reversible switch of a cell from one cell type or form to another, at a frequency above the expected frequency for somatic mutations.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"reversible differentiation","termid":"GO:0090677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}


id: PBO:0087569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH and nucleotide excision repair factor 3 complexes; involved in transcription initiation, required for nucleotide excision repair; ring finger protein similar to mammalian CAK and TFIIH subunit","termid":"PBO:0087569"}


id: FYPO:0003259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of proline into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal proline import","synonyms":[{"name":"normal L-proline import","type":"exact"},{"name":"normal L-proline import across plasma membrane","type":"exact"},{"name":"normal proline import during mitotic cell cycle","type":"related"},{"name":"normal proline import during vegetative growth","type":"exact"},{"name":"normal proline import into cell","type":"exact"},{"name":"normal proline uptake","type":"exact"}],"termid":"FYPO:0003259"}


id: GO:0047298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-amino-2-methylpropanoate + 2-oxoglutarate = 2-methyl-3-oxopropanoate + L-glutamate.","definition_xrefs":["RHEA:13993","EC:2.6.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"(S)-3-amino-2-methylpropionate transaminase activity","secondary_identifiers":["KEGG_REACTION:R04188","MetaCyc:2.6.1.22-RXN"],"synonyms":[{"name":"(S)-3-amino-2-methylpropanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"(S)-3-amino-2-methylpropionate aminotransferase activity","type":"exact"},{"name":"L-3-aminoisobutyrate aminotransferase activity","type":"related"},{"name":"L-3-aminoisobutyrate transaminase activity","type":"related"},{"name":"L-3-aminoisobutyric aminotransferase activity","type":"related"},{"name":"L-AIBAT activity","type":"related"},{"name":"beta-aminobutyric transaminase activity","type":"related"},{"name":"beta-aminoisobutyrate-alpha-ketoglutarate transaminase activity","type":"related"}],"termid":"GO:0047298"}


id: PR:Q09773
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug62 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 62 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.04","synonyms":[{"name":"Spom972h-mug62","type":"exact"}],"termid":"PR:Q09773"}


id: FYPO:0007286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the late endosome membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:12868054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to late endosome","termid":"FYPO:0007725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to late endosome membrane","synonyms":[{"name":"normal protein localisation to late endosome membrane","type":"exact"},{"name":"normal protein localization to late endosome membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to late endosome membrane during vegetative growth","type":"exact"},{"name":"normal protein localization to prevacuolar compartment membrane","type":"exact"}],"termid":"FYPO:0007286"}


id: FYPO:0004175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is lower than normal in cells of the h- mating type.","definition_xrefs":["PomBase:mah","PMID:8668157","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mating efficiency","termid":"FYPO:0000708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased mating efficiency in h- cells","synonyms":[{"name":"reduced mating efficiency in h- cells","type":"exact"}],"termid":"FYPO:0004175"}


id: PBO:0074636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 30","termid":"PBO:0074636"}


id: GO:0038129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the tyrosine kinase receptor ERBB3 on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription. ERBB3 receptors have impaired kinase activity and rely on the kinase activity of the heterodimer partner for activation and signal transmission.","definition_xrefs":["PMID:16460914","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ERBB3 signaling pathway","synonyms":[{"name":"ERBB3 signalling pathway","type":"exact"},{"name":"HER3 signaling pathway","type":"exact"},{"name":"receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"exact"}],"termid":"GO:0038129"}


id: PBO:0028719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_monopolar_index","termid":"PBO:0028719"}


id: PATO:0002454
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A  quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a carpel.","definition_xrefs":["PATO:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carpel-like","termid":"PATO:0002454"}


id: PBO:0029075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_sumoylated_protein_in_cell","termid":"PBO:0029075"}


id: PBO:0054383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1779","termid":"PBO:0054383"}


id: FYPO:0007467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which trimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation","termid":"FYPO:0007466"},{"relation_name":"is_a","term_name":"abnormal histone modification during G0","termid":"FYPO:0007470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 methylation during G0","synonyms":[{"name":"increased histone H3 K9 methylation during G0","type":"exact"},{"name":"increased histone H3-K9 methylation during cell quiescence","type":"exact"},{"name":"increased histone H3-K9 methylation during quiescence","type":"exact"},{"name":"increased histone H3K9me during G0","type":"exact"},{"name":"increased histone lysine H3 K9 methylation during G0","type":"exact"}],"termid":"FYPO:0007467"}


id: GO:0097034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex IV (also known as cytochrome c oxidase complex), a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex IV biogenesis (obsolete GO:0097034)","synonyms":[{"name":"mitochondrial cytochrome c oxidase complex biogenesis","type":"exact"}],"termid":"GO:0097034"}


id: PBO:0044480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 24 subfamily A member 1","termid":"PBO:0044480"}


id: GO:0030993
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A kinesin complex found in eukaryotic axonemes that contains two distinct plus end-directed kinesin motor proteins and at least one accessory subunit, and that functions in the anterograde transport of molecules (cargo) from the basal body to the distal tip of the axoneme.","definition_xrefs":["GOC:kmv","PMID:14570576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal heterotrimeric kinesin-II complex","termid":"GO:0030993"}


id: GO:0099179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adhesion between pre- and post-synaptic membranes.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"synaptic membrane adhesion","termid":"GO:0099560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of synaptic membrane adhesion","synonyms":[{"name":"regulation of synapse adhesion between pre- and post-synapse","type":"exact"}],"termid":"GO:0099179"}


id: PBO:0075119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 168","termid":"PBO:0075119"}


id: GO:0070452
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105942],"is_not":false,"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ergosterol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of ergosterol biosynthetic process","termid":"GO:0032443"},{"relation_name":"is_a","term_name":"positive regulation of sterol biosynthetic process","termid":"GO:0106120"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"ergosterol biosynthetic process","termid":"GO:0006696"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of ergosterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of ergosterol biosynthetic process","type":"narrow"},{"name":"positive regulation of ergosterol anabolism","type":"exact"},{"name":"positive regulation of ergosterol biosynthesis","type":"exact"},{"name":"positive regulation of ergosterol formation","type":"exact"},{"name":"positive regulation of ergosterol synthesis","type":"exact"},{"name":"stimulation of ergosterol biosynthetic process","type":"narrow"},{"name":"up regulation of ergosterol biosynthetic process","type":"exact"},{"name":"up-regulation of ergosterol biosynthetic process","type":"exact"},{"name":"upregulation of ergosterol biosynthetic process","type":"exact"}],"termid":"GO:0070452","terms_by_termid":{"GO:0070452":null}}


id: PBO:0088594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ family ubiquitin-type ligase substrate adaptor Btb2","termid":"PBO:0088594"}


id: FYPO:0005178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the fungal-type vacuole is abnormal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology","termid":"FYPO:0002257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuolar morphology during nitrogen starvation","synonyms":[{"name":"abnormal vacuolar morphology during nitrogen depletion","type":"exact"},{"name":"abnormal vacuolar morphology during nitrogen deprivation","type":"exact"},{"name":"abnormal vacuole morphology during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005178"}


id: PBO:0050458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOMER3 antisense RNA 1","termid":"PBO:0050458"}


id: GO:0015389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: (pyrimidine nucleoside or adenosine)(out) + Na+(out) = (pyrimidine nucleoside or adenosine)(in) + Na+(in).","definition_xrefs":["TC:2.A.41.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transporter activity","termid":"GO:0005345"},{"relation_name":"is_a","term_name":"pyrimidine nucleobase transmembrane transporter activity","termid":"GO:0005350"},{"relation_name":"is_a","term_name":"nucleoside:sodium symporter activity","termid":"GO:0005415"},{"relation_name":"is_a","term_name":"nucleobase:monoatomic cation symporter activity","termid":"GO:0015391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"pyrimidine- and adenosine-specific:sodium symporter activity","synonyms":[{"name":"pyrimidine- and adenine-specific:sodium symporter activity","type":"related"}],"termid":"GO:0015389"}


id: GO:0050628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetate + coenzyme M + NADP+ = 2-oxopropyl-coenzyme M + CO2 + NADPH.","definition_xrefs":["RHEA:16977","EC:1.8.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-oxopropyl-CoM reductase (carboxylating) activity","secondary_identifiers":["MetaCyc:1.8.1.5-RXN","UM-BBD_reactionID:r0854","KEGG_REACTION:R05713"],"synonyms":[{"name":"2-KPCC activity","type":"related"},{"name":"2-mercaptoethanesulfonate,acetoacetate:NADP+ oxidoreductase (decarboxylating)","type":"related"},{"name":"NADPH:2-(2-ketopropylthio)ethanesulfonate oxidoreductase/carboxylase activity","type":"related"},{"name":"NADPH:2-ketopropyl-coenzyme M oxidoreductase/carboxylase activity","type":"related"}],"termid":"GO:0050628"}


id: PBO:0026910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_septated_mononucleate_vegetative_cell","termid":"PBO:0026910"}


id: GO:1900009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of extrachromosomal rDNA circle accumulation involved in replicative cell aging.","definition_xrefs":["GOC:TermGenie","PMID:15020466"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging (obsolete GO:1900009)","synonyms":[{"name":"positive regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"positive regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"positive regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"},{"name":"up regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"up regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"up regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging","type":"related"},{"name":"up regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"}],"termid":"GO:1900009"}


id: PBO:0083511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF DES3/YOR264W","termid":"PBO:0083511"}


id: GO:0009012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + streptomycin = 3''-adenylylstreptomycin + diphosphate + H+.","definition_xrefs":["RHEA:20245","EC:2.7.7.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside nucleotidyltransferase activity","termid":"GO:0034068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"aminoglycoside 3''-adenylyltransferase activity","secondary_identifiers":["MetaCyc:STREPTOMYCIN-3-ADENYLYLTRANSFERASE-RXN","KEGG_REACTION:R02226"],"synonyms":[{"name":"AAD (3'')","type":"related"},{"name":"ATP:streptomycin 3''-adenylyltransferase activity","type":"narrow"},{"name":"streptomycin 3''-adenylyltransferase activity","type":"narrow"}],"termid":"GO:0009012"}


id: FYPO:0004274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore release from an ascus does not occur.","definition_xrefs":["GO:0071998","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abolished ascospore release from ascus","synonyms":[{"name":"absent ascospore release from ascus","type":"exact"},{"name":"ascospore release from ascus abolished","type":"exact"}],"termid":"FYPO:0004274"}


id: SO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A dinucleotide repeat region composed of GT repeating elements.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide_repeat_microsatellite_feature","termid":"SO:0000290"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GT_dinucleotide_repeat","synonyms":[{"name":"d(GT)n","type":"exact"}],"termid":"SO:0001862"}


id: PBO:0041379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C5 3' UTR overlapping transcript 1","termid":"PBO:0041379"}


id: PBO:0080845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 9","termid":"PBO:0080845"}


id: FYPO:0004430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction begins earlier than normal, e.g. before the mitotic spindle has completely disassembled. Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["PomBase:mah","GO:1902404","PMID:19029336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000032","FYPO:0001985","FYPO:0004803","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"premature actomyosin contractile ring contraction","synonyms":[{"name":"advanced actomyosin contractile ring contraction","type":"exact"},{"name":"decreased dwell time before actomyosin contractile ring contraction","type":"exact"},{"name":"premature actomyosin contractile ring constriction","type":"exact"},{"name":"premature actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"premature actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"premature contractile ring contraction","type":"exact"},{"name":"premature cytokinetic contractile ring contraction","type":"exact"},{"name":"premature mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"premature mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0004430"}


id: PBO:0059325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 10","termid":"PBO:0059325"}


id: FYPO:0006422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is higher than normal (i.e. lower than observed in wild-type cells) during S phase of the mitotic cell cycle. Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PMID:27901072","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of histone gene mRNA during vegetative growth","termid":"FYPO:0006413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased level of histone gene mRNA during mitotic S phase","synonyms":[{"name":"increased histone gene mRNA accumulation during mitotic S phase","type":"related"},{"name":"increased level of histone gene RNA during mitotic S phase","type":"exact"},{"name":"increased level of histone gene mRNA during S phase of mitotic cell cycle","type":"exact"},{"name":"increased level of histone gene transcripts during mitotic S phase","type":"exact"}],"termid":"FYPO:0006422"}


id: PBO:0071173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 14","termid":"PBO:0071173"}


id: GO:0060769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of epithelial cell proliferation that contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation involved in prostate gland development","termid":"GO:0060768"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"epithelial cell proliferation involved in prostate gland development","termid":"GO:0060767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell proliferation involved in prostate gland development","termid":"GO:0060769"}


id: PBO:0088349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexitol dehydrogenase","termid":"PBO:0088349"}


id: PBO:0045765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA delta isomerase 1","termid":"PBO:0045765"}


id: GO:0047650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-alkylglycerone + ATP = O-alkylglycerone phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.84","RHEA:23088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"alkylglycerone kinase activity","secondary_identifiers":["KEGG_REACTION:R03944","MetaCyc:ALKYLGLYCERONE-KINASE-RXN"],"synonyms":[{"name":"ATP:O-alkylglycerone phosphotransferase activity","type":"related"},{"name":"alkyldihydroxyacetone kinase (phosphorylating)","type":"related"},{"name":"alkyldihydroxyacetone kinase activity","type":"related"}],"termid":"GO:0047650"}


id: FYPO:0000571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of mating projection assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000301"],"is_obsolete":false,"name":"decreased rate of shmoo formation","synonyms":[{"name":"decreased rate of conjugation tube formation","type":"exact"},{"name":"decreased rate of mating projection assembly","type":"exact"},{"name":"decreased rate of mating projection formation","type":"exact"},{"name":"decreased rate of shmoo assembly","type":"exact"},{"name":"reduced rate of shmoo formation","type":"exact"},{"name":"shmoo formation: decreased rate","type":"related"}],"termid":"FYPO:0000571"}


id: PBO:0110407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 35","termid":"PBO:0110407"}


id: PBO:0055791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LOXL1 antisense RNA 1","termid":"PBO:0055791"}


id: PBO:0039356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidohydrolase domain containing 2","termid":"PBO:0039356"}


id: GO:0141154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the host shutoff of host translation, a host response that prevents mRNA in the cell to be translated, to prevent the symbiont from expressing its genes. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host translation","termid":"GO:0019057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host-directed shutoff of host translation","termid":"GO:0141154"}


id: PBO:0049427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 4","termid":"PBO:0049427"}


id: PBO:0071303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 26","termid":"PBO:0071303"}


id: PBO:0050195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 12","termid":"PBO:0050195"}


id: PBO:0084405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysophosphatidic acid acyltransferase; involved in triacelglyceride homeostasis and lipid droplet formation; localized to lipid droplets and the ER; specificity for oleoyl-CoA","termid":"PBO:0084405"}


id: GO:0002077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proteolytic digestion of components in the acrosomal matrix that occurs as part of the acrosome reaction. The process can occur either in the cumulus oophorous facilitating the penetration of it by the sperm, or at the zona pellucida allowing the sperm to reach the plasma membrane of the egg where the inner acrosomal membrane of the sperm can interact with the egg plasma membrane.","definition_xrefs":["GOC:dph","PMID:3886029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"},{"relation_name":"part_of","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"acrosome matrix dispersal","termid":"GO:0002077"}


id: GO:0086002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a cardiac muscle cell and is involved in its contraction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"},{"relation_name":"part_of","term_name":"cardiac muscle cell contraction","termid":"GO:0086003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell action potential involved in contraction","termid":"GO:0086002"}


id: PBO:0000540
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.21.-","termid":"PBO:0000540"}


id: GO:0072302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of metanephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glomerular mesangial cell proliferation","termid":"GO:0072125"},{"relation_name":"is_a","term_name":"regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072301"},{"relation_name":"negatively_regulates","term_name":"metanephric glomerular mesangial cell proliferation involved in metanephros development","termid":"GO:0072262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072302"}


id: PBO:0039403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 4","termid":"PBO:0039403"}


id: GO:0021704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the locus ceruleus is generated and organized. In mice, the locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic.","definition_xrefs":["ISBN:0838580343","GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"},{"relation_name":"part_of","term_name":"locus ceruleus development","termid":"GO:0021703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locus ceruleus morphogenesis","termid":"GO:0021704"}


id: FYPO:0000467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of invasive growth is increased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased invasive growth (obsolete FYPO:0000467)","synonyms":[{"name":"invasive growth: increased","type":"related"}],"termid":"FYPO:0000467"}


id: PBO:0076470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport and golgi organization 6 homolog","termid":"PBO:0076470"}


id: GO:0016474
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sodium ion-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of sodium ions across a concentration gradient. The complex comprises a membrane sector (V0) that carries out proton transport and a cytoplasmic compartment sector (V1) that catalyzes ATP hydrolysis.","definition_xrefs":["GOC:mah","PMID:15802565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion-transporting two-sector ATPase complex","termid":"GO:0016472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sodium ion-transporting V-type ATPase complex","synonyms":[{"name":"sodium-translocating V-type ATPase complex","type":"exact"}],"termid":"GO:0016474"}


id: PBO:0029151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_paraquat","termid":"PBO:0029151"}


id: GO:0048395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intermediate mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"intermediate mesodermal cell fate determination","termid":"GO:0048394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intermediate mesodermal cell fate determination","termid":"GO:0048395"}


id: GO:0005280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + H+(out) = amino acid(in) + H+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:monoatomic cation symporter activity","termid":"GO:0005416"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"amino acid:proton symporter activity","secondary_identifiers":["Reactome:R-HSA-8875623"],"synonyms":[{"name":"cation/amino acid symporter","type":"broad"},{"name":"hydrogen:amino acid symporter activity","type":"exact"}],"termid":"GO:0005280"}


id: PBO:0079443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB like protein 1","termid":"PBO:0079443"}


id: GO:0046609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + solute(in) = solute(in) + sulfate(out), by a channel in a cell membrane whose opening is governed by the membrane potential.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete voltage-gated sulfate antiporter activity (obsolete GO:0046609)","synonyms":[{"name":"prestin","type":"narrow"},{"name":"voltage gated sulfate antiporter activity","type":"exact"},{"name":"voltage-dependent sulfate antiporter activity","type":"exact"},{"name":"voltage-sensitive sulfate antiporter activity","type":"exact"},{"name":"voltage-sensitive sulphate antiporter activity","type":"exact"}],"termid":"GO:0046609"}


id: PBO:0047595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate hydratase","termid":"PBO:0047595"}


id: PR:P78958
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glyceraldehyde-3-phosphate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.11","secondary_identifiers":["UniProtKB:P78958"],"synonyms":[{"name":"GAPDH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GAPDH","type":"exact"}],"termid":"PR:P78958"}


id: PBO:0078532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 25","termid":"PBO:0078532"}


id: PBO:0058644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6773","termid":"PBO:0058644"}


id: PBO:0067807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 109","termid":"PBO:0067807"}


id: GO:0016402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pristanoyl-CoA + O2 = trans-2,3-dehydropristanoyl-CoA + hydrogen peroxide.","definition_xrefs":["GOC:jsg","RHEA:40459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA oxidase activity","termid":"GO:0003997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pristanoyl-CoA oxidase activity","secondary_identifiers":["Reactome:R-HSA-389891","Reactome:R-HSA-389889"],"termid":"GO:0016402"}


id: PR:O94521
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1281.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal reductase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.04","synonyms":[{"name":"PL reductase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PL-red 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1281.04","type":"exact"}],"termid":"PR:O94521"}


id: GO:0033475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an indole-3-acetic acid amide conjugate, a form of indoleacetic acid covalently bound to an amino acid or polypeptide through an amide bond.","definition_xrefs":["GOC:mah","MetaCyc:PWY-1782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indoleacetic acid conjugate biosynthetic process","termid":"GO:0033474"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"indoleacetic acid amide conjugate biosynthetic process","synonyms":[{"name":"IAA amide conjugate biosynthetic process","type":"exact"},{"name":"indole acetic acid amide conjugate biosynthesis","type":"exact"},{"name":"indole acetic acid amide conjugate biosynthetic process","type":"exact"},{"name":"indoleacetic acid amide conjugate anabolism","type":"exact"},{"name":"indoleacetic acid amide conjugate biosynthesis","type":"exact"},{"name":"indoleacetic acid amide conjugate formation","type":"exact"},{"name":"indoleacetic acid amide conjugate synthesis","type":"exact"}],"termid":"GO:0033475"}


id: GO:0110117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of compound eye photoreceptor cell differentiation.","definition_xrefs":["GOC:ha","PMID:16377567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of photoreceptor cell differentiation","termid":"GO:0046534"},{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"positively_regulates","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110117"}


id: PBO:0027398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-UAA_suppression","termid":"PBO:0027398"}


id: PBO:0090068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase [NAD(P)+]","termid":"PBO:0090068"}


id: CHEBI:47600
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purvalanol A","termid":"CHEBI:47600"}


id: PR:O60180
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arx1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metalloprotease arx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.05","synonyms":[{"name":"Spom972h-arx1","type":"exact"},{"name":"associated with ribosomal export complex protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60180"}


id: MOD:00415
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod - OBSOLETE because Unimod entry 22 is now merged with entry 21 remap to MOD:00696 'phosphorylated residue'.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00415 phosphorylation without neutral loss (obsolete MOD:00415)","termid":"MOD:00415"}


id: PR:O74777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A KRR1 small subunit processome component that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12581:SF0","PRO:DNx","OMA:SCHPO03344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRR1 small subunit processome component homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.05","secondary_identifiers":["UniProtKB:O74777"],"synonyms":[{"name":"KRR-R motif-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-KRR1","type":"exact"},{"name":"ribosomal RNA assembly protein mis3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74777"}


id: PBO:0048738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase","termid":"PBO:0048738"}


id: PBO:0034150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_vector_for","termid":"PBO:0034150"}


id: GO:0080187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The last stage of flower development during which programmed degradation of macromolecules and nutrient recycling take place.","definition_xrefs":["PMID:19380421","PMID:21689171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ senescence","termid":"GO:0090693"},{"relation_name":"part_of","term_name":"floral organ development","termid":"GO:0048437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ senescence","termid":"GO:0080187"}


id: PBO:0031088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_subcellular_component","termid":"PBO:0031088"}


id: FYPO:0004568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the mitotic or meiotic spindle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal spindle","termid":"FYPO:0004568"}


id: PBO:0054745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2154","termid":"PBO:0054745"}


id: GO:1990258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by addition of a methyl group to an glutamine residue.","definition_xrefs":["PMID:24352239"],"gene_count":0,"genotype_count":0,"name":"obsolete histone glutamine methylation (obsolete GO:1990258)","termid":"GO:1990258"}


id: PBO:0051609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 33","termid":"PBO:0051609"}


id: PBO:0056017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM12 pseudogene 1","termid":"PBO:0056017"}


id: PBO:0082838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; required for ribosomal large subunit maturation; functionally redundant with Ssf2p; member of the Brix family; SSF1 has a paralog, SSF2, that arose from the whole genome duplication","termid":"PBO:0082838"}


id: FYPO:0007420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal in telomeric regions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abnormal transcription at telomere","synonyms":[{"name":"abnormal telomeric transcription","type":"exact"},{"name":"abnormal transcription from telomere","type":"exact"}],"termid":"FYPO:0007420"}


id: PBO:0090781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor zf-C2H2 type","termid":"PBO:0090781"}


id: PBO:0028231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_level_during_cellular_response_to_salt_stress","termid":"PBO:0028231"}


id: GO:0061867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The mitotic spindle organization process by which a mitotic spindle becomes asymmetric either in position or structure.","definition_xrefs":["PMID:26659188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle organization","termid":"GO:0007052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"establishment of mitotic spindle asymmetry","termid":"GO:0061867"}


id: FYPO:0005273
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115628,115599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[115220,115222,115221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a cell cycle phase transition normally.","definition_xrefs":["PomBase:mah","GO:0044770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01330":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle phase transition","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330","SJAG_01956","SJAG_03351","SJAG_03575"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","mad2delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0005273","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000324":null,"FYPO:0004318":null}}


id: FYPO:0006242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication forks stall at a lower frequency in mutant cells than in wild type during a cellular response to DNA damage.","definition_xrefs":["PMID:28806726","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"decreased replication fork stalling during cellular response to DNA damage","synonyms":[{"name":"decreased frequency of replication fork stalling during cellular response to DNA damage","type":"exact"},{"name":"decreased replication fork stalling during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased replication fork stalling during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"reduced replication fork stalling during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0006242"}


id: GO:0002058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to uracil.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase binding","termid":"GO:0002061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"uracil binding","termid":"GO:0002058"}


id: GO:1901205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of a cardiac adrenergic receptor signaling pathway.","definition_xrefs":["GOC:rl","GOC:mtg_cardiac_conduct_nov11","GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of adrenergic receptor signaling pathway involved in heart process (obsolete GO:1901205)","synonyms":[{"name":"downregulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"downregulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"down regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"down regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"down-regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"down-regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"downregulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"inhibition of adrenergic receptor signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"inhibition of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"negative regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"negative regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:1901205"}


id: PBO:0089930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA/Swr1/Ino80 complex AAA family ATPase Rvb2","termid":"PBO:0089930"}


id: PR:P23880
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sds21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P23880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase PP1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC31H12.05c","synonyms":[{"name":"Spom972h-sds21","type":"exact"},{"name":"suppressor protein SDS21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P23880"}


id: GO:0097665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Mdm30 in S. cerevisiae.","definition_xrefs":["GOC:jd","PMID:14747994","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Mdm30 ubiquitin ligase complex","termid":"GO:0097665"}


id: GO:0015834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peptidoglycan peptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Peptidoglycan peptides are the oligopeptides found in peptidoglycan networks which cross-link the polysaccharide chains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"peptidoglycan-associated peptide transport","synonyms":[{"name":"murein peptide transport","type":"exact"},{"name":"muropeptide transport","type":"exact"},{"name":"peptidoglycan peptide transport","type":"exact"}],"termid":"GO:0015834"}


id: GO:1990155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Dsc E3 ubiquitin ligase complex, an E3 ubiquitin ligase complex localized to the ER and Golgi membrane.","definition_xrefs":["PMID:23760507","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"Dsc E3 ubiquitin ligase complex assembly","synonyms":[{"name":"Dsc complex assembly","type":"exact"}],"termid":"GO:1990155"}


id: GO:0033678
data:
  {"annotated_genes":["SJAG_03780","SJAG_02242"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95982,108619],"is_not":false,"summary":null,"term":"GO:0033678"}]},"cv_name":"molecular_function","definition":"Unwinding of a DNA/RNA duplex in the 5' to 3' direction, driven by ATP hydrolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA/RNA helicase activity","termid":"GO:0033677"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02242":null,"SJAG_03780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"5'-3' DNA/RNA helicase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0033682","Reactome:R-HSA-163120"],"synonyms":[{"name":"5' to 3' DNA/RNA helicase activity","type":"exact"},{"name":"ATP-dependent 5' to 3' DNA/RNA helicase activity","type":"exact"},{"name":"ATP-dependent 5'-3' DNA/RNA helicase activity","type":"exact"}],"termid":"GO:0033678","terms_by_termid":{"GO:0033678":null}}


id: PBO:0086879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor; contains a Zn(II)2Cys6 zinc finger domain characteristic of DNA-binding proteins; computational analysis suggests a role in regulation of expression of genes encoding transporters; binds Sin3p in a two-hybrid assay;","termid":"PBO:0086879"}


id: PBO:0069013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 257, pseudogene","termid":"PBO:0069013"}


id: GO:0048270
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of methionine adenosyltransferase.","definition_xrefs":["PMID:10644686","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"methionine adenosyltransferase regulator activity","synonyms":[{"name":"MAT regulator activity","type":"exact"}],"termid":"GO:0048270"}


id: GO:0050923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a motile cell or organism towards a lower concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"negative chemotaxis","termid":"GO:0050919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of negative chemotaxis","termid":"GO:0050923"}


id: PBO:0059903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 26","termid":"PBO:0059903"}


id: GO:0060172
data:
  {"annotated_genes":["SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93396],"is_not":false,"summary":null,"term":"GO:0060172"}]},"cv_name":"biological_process","definition":"The removal of tubulin heterodimers from one or both ends of an astral microtubule. An astral microtubule is any of the spindle microtubules that radiate in all directions from the spindle poles and are thought to contribute to the forces that separate the poles and position them in relation to the rest of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule depolymerization","termid":"GO:0007019"},{"relation_name":"is_a","term_name":"astral microtubule organization","termid":"GO:0030953"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"astral microtubule depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060172","terms_by_termid":{"GO:0060172":null}}


id: PBO:0089175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23","termid":"PBO:0089175"}


id: PBO:0091687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element (with segmental deletion) Wtf2","termid":"PBO:0091687"}


id: GO:0052636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an arabinosyl group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arabinosyltransferase activity","synonyms":[{"name":"arabinosyl transferase activity","type":"exact"}],"termid":"GO:0052636"}


id: PBO:0027001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_prospore_membrane","termid":"PBO:0027001"}


id: PBO:0111829
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ domain","termid":"PBO:0111829"}


id: PR:Q09686
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13C5.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine amidotransferase-like protein C13C5.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.04","synonyms":[{"name":"Spom972h-SPAC13C5.04","type":"exact"}],"termid":"PR:Q09686"}


id: PBO:0004308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine--dolichyl-phosphateN-acetylglucosaminephosphotransferase","termid":"PBO:0004308"}


id: PBO:0046660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"espin","termid":"PBO:0046660"}


id: PBO:0078790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 13-1","termid":"PBO:0078790"}


id: GO:2001060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a D-glycero-D-manno-heptose 7-phosphate.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-glycero-D-manno-heptose 7-phosphate metabolic process","synonyms":[{"name":"D-glycero-D-manno-heptose 7-phosphate metabolism","type":"exact"}],"termid":"GO:2001060"}


id: PBO:0042286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD2 molecule","termid":"PBO:0042286"}


id: PBO:0040454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 11B (putative)","termid":"PBO:0040454"}


id: PBO:0052429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kizuna centrosomal protein","termid":"PBO:0052429"}


id: FYPO:0005048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at RNA polymerase II promoters is increased.","definition_xrefs":["PomBase:mah","PMID:20605454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin at RNA polymerase II promoter during vegetative growth","synonyms":[{"name":"increased protein localisation to chromatin at RNA polymerase II promoter during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at RNA pol II promoter during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at RNA polymerase II promoter during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005048"}


id: GO:0052098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly by an organism of a cellular component or anatomical structure for the purpose of obtaining nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"},{"relation_name":"part_of","term_name":"acquisition of nutrients from symbiont","termid":"GO:0051850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation by host of specialized structure for nutrient acquisition from symbiont","termid":"GO:0052098"}


id: GO:0045024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of bonds after acidic amino acids and after branched chain amino acids.","definition_xrefs":["PMID:11735414"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glutamyl peptide hydrolyzing enzyme activity (obsolete GO:0045024)","synonyms":[{"name":"peptidyl-glutamyl peptide hydrolyzing enzyme activity","type":"exact"}],"termid":"GO:0045024"}


id: PBO:0047160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 186 member B","termid":"PBO:0047160"}


id: GO:0021614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the glossopharyngeal nerve to attain its fully functional state. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.","definition_xrefs":["ISBN:0838580343","GOC:dgh","GOC:cls","GO_REF:0000021","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"glossopharyngeal nerve development","termid":"GO:0021563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glossopharyngeal nerve maturation","synonyms":[{"name":"CN IX maturation","type":"related"}],"termid":"GO:0021614"}


id: PBO:0091563
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Rad Wee1","termid":"PBO:0091563"}


id: FYPO:0001859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at a higher frequency than normal. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased minichromosome loss","synonyms":[{"name":"minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0001859"}


id: GO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. MAPKKK cascade involved in transduction of signal promoting sporulation. As in, but not restricted to, the taxon Saccharomyces (Saccharomyces, ncbi_taxonomy_id:4930).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade during sporulation (sensu Saccharomyces) (obsolete GO:0000202)","synonyms":[{"name":"MAPKKK cascade during sporulation (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000202"}


id: GO:0075339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth or development of symbiont during interaction with host (obsolete GO:0075339)","synonyms":[{"name":"positive regulation of growth or development of symbiont during interaction with host","type":"exact"}],"termid":"GO:0075339"}


id: PBO:0086637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YMR196W is not an essential gene","termid":"PBO:0086637"}


id: PBO:0017044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug110","termid":"PBO:0017044"}


id: PBO:0003354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsk1 associated cyclin","termid":"PBO:0003354"}


id: GO:0140404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the modulation (either activation or suppression) of a host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21467214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"},{"relation_name":"is_a","term_name":"effector-mediated modulation of host defenses by symbiont","termid":"GO:0140415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated perturbation of host innate immune response by symbiont","synonyms":[{"name":"effector mediated modulation of host immune response by symbiont","type":"exact"},{"name":"effector triggered modulation of host immune response by symbiont","type":"exact"},{"name":"effector-dependent modulation of host immune response by symbiont","type":"exact"},{"name":"effector-mediated modulation of host immunity","type":"exact"},{"name":"effector-mediated modulation of host innate immune response by symbiont","type":"exact"},{"name":"effector-triggered modulation of host immune response by symbiont","type":"exact"}],"termid":"GO:0140404"}


id: GO:0052215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in the environment of a second organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052215)","synonyms":[{"name":"energy taxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"energy taxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052215"}


id: GO:0072185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the metanephric cap from an initial condition to its mature state. The metanephric cap is formed by the condensation of metanephric mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metanephric mesenchyme development","termid":"GO:0072075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap development","termid":"GO:0072185"}


id: GO:0015428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type I protein secretor activity (obsolete GO:0015428)","synonyms":[{"name":"type I protein secretor activity","type":"exact"}],"termid":"GO:0015428"}


id: PBO:0072393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 19","termid":"PBO:0072393"}


id: PBO:0041926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 1 pseudogene 1","termid":"PBO:0041926"}


id: FYPO:0003598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an snRNA molecule is decreased.","definition_xrefs":["PomBase:mah","GO:0034472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal snRNA 3'-end processing","termid":"FYPO:0003596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"decreased snRNA 3'-end processing","synonyms":[{"name":"decreased snRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"decreased snRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"reduced snRNA 3'-end processing","type":"exact"}],"termid":"FYPO:0003598"}


id: PBO:0063407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 3","termid":"PBO:0063407"}


id: MOD:01940
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an asparagine and the following glutamic acid residue with the formation of (2-aminosuccinimidyl)pentanedioic acid and the release of ammonia.","definition_xrefs":["RESID:AA0593#ASN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-(2-aminosuccinimidyl)pentanedioic acid","termid":"MOD:01946"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(2-aminosuccinimidyl)pentanedioic acid (Asn)","synonyms":[{"name":"(4S)-4-[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]-5-oxopentanoic acid","type":"exact"},{"name":"2-(2-aminosuccinimidyl)pentanedioic acid","type":"exact"},{"name":"aspartimide glutamic acid","type":"exact"}],"termid":"MOD:01940"}


id: GO:0150141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD86 biosynthetic process.","definition_xrefs":["GOC:aruk","PMID:26936882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"regulation of CD86 production","termid":"GO:0150140"},{"relation_name":"negatively_regulates","term_name":"CD86 biosynthetic process","termid":"GO:0035781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD86 production","synonyms":[{"name":"negative regulation of CD86 biosynthetic process","type":"exact"}],"termid":"GO:0150141"}


id: PBO:0067496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 632, pseudogene","termid":"PBO:0067496"}


id: PBO:0088272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic peptidase domain superfamily","termid":"PBO:0088272"}


id: internal:label
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"label","termid":"internal:label"}


id: SO:0001484
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An X element combinatorial repeat is a repeat region located between the X element and the telomere or adjacent Y' element.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"part_of","term_name":"telomere","termid":"SO:0000624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X_element_combinatorial_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:x_element_combinatorial_repeat","type":"exact"},{"name":"X element combinatorial repeat","type":"exact"}],"termid":"SO:0001484"}


id: GO:0090326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement.","definition_xrefs":["GOC:tb","GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of locomotion","termid":"GO:0040017"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"regulation of locomotion involved in locomotory behavior","termid":"GO:0090325"},{"relation_name":"positively_regulates","term_name":"locomotion involved in locomotory behavior","termid":"GO:0031987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of locomotion involved in locomotory behavior","termid":"GO:0090326"}


id: GO:0030770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + demethylmacrocin = S-adenosyl-L-homocysteine + H+ + macrocin.","definition_xrefs":["EC:2.1.1.102","RHEA:17573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"demethylmacrocin O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02859","MetaCyc:DEMETHYLMACROCIN-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:demethylmacrocin 2'''-O-methyltransferase activity","type":"related"},{"name":"demethylmacrocin methyltransferase activity","type":"related"}],"termid":"GO:0030770"}


id: PATO:0001766
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a cell by virtue of its anisotropic intracellular organization.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001766 cellular polarity (obsolete PATO:0001766)","termid":"PATO:0001766"}


id: PBO:0071582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a","termid":"PBO:0071582"}


id: FYPO:0000844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mercaptoethanol. Cells stop growing (and may die) at a concentration of mercaptoethanol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to mercaptoethanol","synonyms":[{"name":"hypersensitive to mercaptoethanol","type":"exact"},{"name":"sensitive to 2-sulfanylethanol","type":"exact"},{"name":"sensitive to mercaptoethanol during mitotic cell cycle","type":"related"},{"name":"sensitive to mercaptoethanol during vegetative growth","type":"exact"}],"termid":"FYPO:0000844"}


id: GO:0022407
data:
  {"annotated_genes":["SJAG_03802","SJAG_01253","SJAG_04191","SJAG_00156","SJAG_00910","SJAG_03484","SJAG_03473","SJAG_01778","SJAG_00926","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94679,95393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022408"},{"annotations":[99658,102333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060257"},{"annotations":[101976,104724,104847,110177,112235,107462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of a cell to another cell.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"regulates","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01778":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell-cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0022407","terms_by_termid":{"GO:0022408":null,"GO:0060257":null,"GO:1900735":null}}


id: GO:0006559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-phenylalanine metabolic process","termid":"GO:0006558"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process","termid":"GO:1902222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-phenylalanine catabolic process","synonyms":[{"name":"L-phenylalanine breakdown","type":"exact"},{"name":"L-phenylalanine catabolism","type":"exact"},{"name":"L-phenylalanine degradation","type":"exact"},{"name":"phenylalanine catabolic process","type":"broad"},{"name":"phenylalanine catabolism","type":"broad"}],"termid":"GO:0006559"}


