# terms

id: PBO:0012826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-removed_during","termid":"PBO:0012826"}


id: PBO:0005797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk34","termid":"PBO:0005797"}


id: GO:0034023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole = 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate.","definition_xrefs":["EC:5.4.99.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"5-(carboxyamino)imidazole ribonucleotide mutase activity","secondary_identifiers":["MetaCyc:RXN0-743","RHEA:13193"],"synonyms":[{"name":"5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole carboxymutase activity","type":"related"},{"name":"N5-CAIR mutase activity","type":"related"},{"name":"N5-carboxyaminoimidazole ribonucleotide mutase activity","type":"related"},{"name":"PurE","type":"related"},{"name":"class I PurE","type":"related"}],"termid":"GO:0034023"}


id: GO:0052757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of hexosaminic linkages in chondroitin, a linear polymer structure composed of the repeating disaccharide unit [->4)-D-glucuronic acid-(1->3)-N-acetyl-D-galactosamine-(1-], also written as [->4GlcUA1->3GalNAc1-].","definition_xrefs":["PMID:18390555","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endogalactosaminidase activity","termid":"GO:0033931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"chondroitin hydrolase activity","synonyms":[{"name":"chondroitin endo-beta-galactosaminidase activity","type":"exact"}],"termid":"GO:0052757"}


id: GO:0009669
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sucrose(out) + monovalent cation(out) = sucrose(in) + monovalent cation(in).","definition_xrefs":["TC:2.A.2.-.-","GOC:jy","TC:2.A.2.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"sucrose transmembrane transporter activity","termid":"GO:0008515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sucrose:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sucrose permease activity","type":"related"},{"name":"sucrose:cation symporter activity","type":"broad"},{"name":"sucrose:monovalent cation symporter activity","type":"exact"}],"termid":"GO:0009669","terms_by_termid":{"GO:0008506":null}}


id: PBO:0046609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 11","termid":"PBO:0046609"}


id: GO:0140949
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106586],"is_not":false,"summary":null,"term":"GO:0140949"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl9-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl9-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of three methyl groups to the unmethylated lysine residue at position 9 of histone H3, producing histone H3K9me3.","definition_xrefs":["RHEA:60276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K9 methyltransferase activity","termid":"GO:0046974"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0140096","GO:0003824","GO:0008276"],"is_obsolete":false,"name":"histone H3K9 trimethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.355"],"synonyms":[{"name":"histone H3-K9 trimethylation","type":"broad"},{"name":"histone H3K9 mono/di/trimethylase activity","type":"exact"},{"name":"histone H3K9 trimethylase activity","type":"exact"},{"name":"histone H3K9 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0140949","terms_by_termid":{"GO:0140949":null}}


id: GO:1904096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of protein tyrosine phosphatase activity.","definition_xrefs":["GO_REF:0000088","GOC:bhm","GOC:TermGenie","PMID:22389722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase complex","termid":"GO:1903293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein tyrosine phosphatase complex","termid":"GO:1904096"}


id: GO:0050589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leucocyanidin + 2-oxoglutarate + O2 = cis- or trans-dihydroquercetin + succinate + CO2 + 2 H2O.","definition_xrefs":["MetaCyc:1.14.11.19-RXN","EC:1.14.20.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"leucocyanidin oxygenase activity","secondary_identifiers":["MetaCyc:RXN-602","GO:0045432"],"synonyms":[{"name":"anthocyanidin synthase activity","type":"related"},{"name":"leucoanthocyanidin dioxygenase activity","type":"related"},{"name":"leucoanthocyanidin hydroxylase","type":"related"},{"name":"leucocyanidin,2-oxoglutarate:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0050589"}


id: PBO:0081023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 4","termid":"PBO:0081023"}


id: PBO:0027057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_beta-glucan_level","termid":"PBO:0027057"}


id: PBO:0056629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 9","termid":"PBO:0056629"}


id: GO:0034206
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex formed by the association of a distinct set of general and specific transcription factors with a region of enhancer DNA. The cooperative assembly of an enhanceosome confers specificity of transcriptional regulation.","definition_xrefs":["PMID:11250145","PMID:17574024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"enhanceosome","secondary_identifiers":["Wikipedia:Enhanceosome"],"termid":"GO:0034206"}


id: PBO:0038875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 2","termid":"PBO:0038875"}


id: GO:0043082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of a plant egg cell. This nucleus is found at the micropylar end of the embryo.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megasporocyte nucleus","termid":"GO:0043076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"megagametophyte egg cell nucleus","termid":"GO:0043082"}


id: PBO:0030769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K14_acetylation_at_centromere_outer_repeat","termid":"PBO:0030769"}


id: GO:2000957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cyclodextrin metabolic process","termid":"GO:2000954"},{"relation_name":"regulates","term_name":"cyclodextrin catabolic process","termid":"GO:2000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cyclodextrin catabolic process","synonyms":[{"name":"regulation of cyclodextrin catabolism","type":"exact"}],"termid":"GO:2000957"}


id: PBO:0052110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A regulatory beta subunit 3","termid":"PBO:0052110"}


id: FYPO:0004207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature siRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased siRNA level","synonyms":[{"name":"increased mature siRNA level","type":"exact"},{"name":"increased siRNA accumulation","type":"related"},{"name":"increased siRNA level during mitotic cell cycle","type":"related"},{"name":"increased siRNA level during vegetative growth","type":"exact"},{"name":"increased siRNA transcript level","type":"exact"},{"name":"increased small interfering RNA level","type":"exact"}],"termid":"FYPO:0004207"}


id: PBO:0030226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tacrolimus_during_osmotic_stress","termid":"PBO:0030226"}


id: PBO:0109295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MX1 antisense RNA 1","termid":"PBO:0109295"}


id: GO:2001084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-arabinofuranose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"L-arabinofuranose binding","termid":"GO:2001084"}


id: FYPO:0008013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of inositol hexakisphosphate kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mlr","PMID:35536002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal inositol hexakisphosphate kinase activity","termid":"FYPO:0008013"}


id: PBO:0088224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family fusion GTPase (mitofusin) Fzo1","termid":"PBO:0088224"}


id: PBO:0077923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 14","termid":"PBO:0077923"}


id: PR:Q9US45
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of RNA polymerase II transcription subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13104:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.15c","secondary_identifiers":["UniProtKB:Q9US45"],"synonyms":[{"name":"RNA polymerase II mediator complex protein pmc5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC1002.15c","type":"related"},{"name":"Spom972h-MED6","type":"exact"},{"name":"mediator complex subunit 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pmc5","type":"related"}],"termid":"PR:Q9US45"}


id: GO:1905917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell differentiation involved in phenotypic switching.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:25089138","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905915"},{"relation_name":"positively_regulates","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell differentiation involved in phenotypic switching","synonyms":[{"name":"activation of cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"up regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905917"}


id: PBO:0058863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9718","termid":"PBO:0058863"}


id: PBO:0089013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L14","termid":"PBO:0089013"}


id: GO:0021718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior olivary nucleus over time, from its formation to the mature structure. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus development","synonyms":[{"name":"superior olive development","type":"related"}],"termid":"GO:0021718"}


id: PBO:0084173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High osmolarity-regulated gene of unknown function","termid":"PBO:0084173"}


id: PBO:0026696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_melibiose_carbon_source","termid":"PBO:0026696"}


id: GO:0061386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The closure of the temporary ventral gap in the optic cup that contributes to its shaping.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial sheet","termid":"GO:0002011"},{"relation_name":"part_of","term_name":"optic cup morphogenesis involved in camera-type eye development","termid":"GO:0002072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"closure of optic fissure","synonyms":[{"name":"closure or choriod fissure","type":"related"}],"termid":"GO:0061386"}


id: GO:0052358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont glucan (obsolete GO:0052358)","termid":"GO:0052358"}


id: GO:0018336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-tyrosine to form peptidyl-dihydroxyphenylalanine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine hydroxylation","termid":"GO:0018336"}


id: PBO:0069220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 475, pseudogene","termid":"PBO:0069220"}


id: PBO:0079153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 13","termid":"PBO:0079153"}


id: PBO:0018065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thiamine pyrophosphate transmembrane transporter (predicted)","termid":"PBO:0018065"}


id: PR:O42939
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SUMO-activating enzyme subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10953:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-activating enzyme E1-like (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.03c","secondary_identifiers":["UniProtKB:O42939"],"synonyms":[{"name":"SPBC16H5.03c","type":"related"},{"name":"Spom972h-UBA2","type":"exact"},{"name":"pmt3-activating enzyme subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42939"}


id: GO:2000349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of signaling via the CD40 signaling pathway.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of CD40 signaling pathway","termid":"GO:2000348"},{"relation_name":"negatively_regulates","term_name":"CD40 signaling pathway","termid":"GO:0023035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD40 signaling pathway","synonyms":[{"name":"negative regulation of CD40 signalling pathway","type":"exact"}],"termid":"GO:2000349"}


id: PBO:0030465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_gross_chromosomal_rearrangement","termid":"PBO:0030465"}


id: GO:0062010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the primitive palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"roof of mouth development","termid":"GO:0060021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primitive palate development","termid":"GO:0062010"}


id: PBO:0062341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily J member 1","termid":"PBO:0062341"}


id: PBO:0058231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4520-2","termid":"PBO:0058231"}


id: GO:0050619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3Z)-phytochromobilin + oxidized ferredoxin = biliverdin IXa + reduced ferredoxin.","definition_xrefs":["EC:1.3.7.4","MetaCyc:1.3.7.4-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","termid":"GO:0016636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phytochromobilin:ferredoxin oxidoreductase activity","secondary_identifiers":["RHEA:16377"],"synonyms":[{"name":"(3Z)-phytochromobilin:ferredoxin oxidoreductase activity","type":"related"},{"name":"HY2","type":"related"},{"name":"P-Phi-B synthase activity","type":"related"},{"name":"PFB synthase activity","type":"related"},{"name":"PPhiB synthase activity","type":"related"},{"name":"phytochromobilin synthase activity","type":"related"}],"termid":"GO:0050619"}


id: GO:0006059
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving hexitols, any alditol with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"hexitol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hexitol metabolism","type":"exact"},{"name":"sugar alcohol (hexitol) metabolic process","type":"exact"},{"name":"sugar alcohol (hexitol) metabolism","type":"exact"}],"termid":"GO:0006059","terms_by_termid":{"GO:0006062":null}}


id: PBO:0057587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 891b","termid":"PBO:0057587"}


id: FYPO:0007235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at early replication origins (i.e. origins that normally fire early in S phase) is decreased.","definition_xrefs":["PMID:22279046","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at replication origin","termid":"FYPO:0003950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to chromatin at early replication origin","synonyms":[{"name":"decreased protein localisation to chromatin at early replication origin","type":"exact"},{"name":"decreased protein localization to chromatin at early origin","type":"exact"},{"name":"decreased protein localization to chromatin at early replication origin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to early replication origin during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at early replication origin","type":"exact"}],"termid":"FYPO:0007235"}


id: PBO:0088426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface adhesion molecule with predicted signal peptide (predicted)","termid":"PBO:0088426"}


id: GO:0060727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate or frequency of coreceptor activity involved in epidermal growth factor receptor signaling pathway.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of coreceptor activity involved in epidermal growth factor receptor signaling pathway (obsolete GO:0060727)","synonyms":[{"name":"positive regulation of Neu/ErbB-2 receptor activity","type":"narrow"},{"name":"positive regulation of coreceptor activity involved in epidermal growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060727"}


id: PBO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Berardinelli-Seip congenital lipodystrophy type 2, Silver spastic paraplegia syndrome, distal hereditary motor neuropathy type V","termid":"PBO:0002067"}


id: PBO:0074091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 6","termid":"PBO:0074091"}


id: SO:0001163
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter motif with consensus sequence TCATTCG.","definition_xrefs":["PMID:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INR1_motif","synonyms":[{"name":"DMp3","type":"exact"},{"name":"INR1 motif","type":"exact"},{"name":"directional motif p3","type":"exact"},{"name":"directional promoter motif 3","type":"exact"}],"termid":"SO:0001163"}


id: FYPO:0006295
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["GO:0016236","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished macroautophagy","termid":"FYPO:0000380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished macroautophagy during nitrogen starvation","synonyms":[{"name":"abolished macroautophagy during cellular response to nitrogen starvation","type":"exact"},{"name":"abolished macroautophagy during nitrogen depletion","type":"exact"},{"name":"abolished macroautophagy during nitrogen deprivation","type":"exact"},{"name":"macroautophagy abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006295"}


id: GO:0050857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B- or T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"is_a","term_name":"regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050854"},{"relation_name":"positively_regulates","term_name":"antigen receptor-mediated signaling pathway","termid":"GO:0050851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of antigen receptor-mediated signaling pathway","synonyms":[{"name":"activation of antigen receptor-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of antigen receptor mediated signalling pathway","type":"exact"},{"name":"stimulation of antigen receptor-mediated signaling pathway","type":"narrow"},{"name":"up regulation of antigen receptor-mediated signaling pathway","type":"exact"},{"name":"up-regulation of antigen receptor-mediated signaling pathway","type":"exact"},{"name":"upregulation of antigen receptor-mediated signaling pathway","type":"exact"}],"termid":"GO:0050857"}


id: PBO:0075625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRING1 pseudogene 2","termid":"PBO:0075625"}


id: GO:0061275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mesonephric proximal tubule over time, from its formation to the mature structure. The mesonephric proximal tubule extends from the capsule to the distal tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"},{"relation_name":"is_a","term_name":"proximal tubule development","termid":"GO:0072014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric proximal tubule development","termid":"GO:0061275"}


id: GO:1903171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of carbon dioxide within an organism or cell.","definition_xrefs":["GOC:TermGenie","PMID:16571594","GO_REF:0000072","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete carbon dioxide homeostasis (obsolete GO:1903171)","termid":"GO:1903171"}


id: GO:0030493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a bacteriochlorophyll, any of the chlorophylls of photosynthetic bacteria. They differ structurally from the chlorophylls of higher plants.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll metabolic process","termid":"GO:0015994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"bacteriochlorophyll metabolic process","synonyms":[{"name":"bacteriochlorophyll metabolism","type":"exact"}],"termid":"GO:0030493"}


id: GO:0008909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chorismate = isochorismate.","definition_xrefs":["RHEA:18985","EC:5.4.4.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isochorismate synthase activity","secondary_identifiers":["KEGG_REACTION:R01717","MetaCyc:ISOCHORSYN-RXN"],"synonyms":[{"name":"isochorismate hydroxymutase activity","type":"related"},{"name":"isochorismate mutase activity","type":"exact"},{"name":"isochorismate synthetase activity","type":"related"}],"termid":"GO:0008909"}


id: PBO:0070926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 34","termid":"PBO:0070926"}


id: GO:0102374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ursolic aldehyde + NADPH + O2 + H+ = ursolic acid + NADP + H2O.","definition_xrefs":["GOC:pz","PMID:22039103"],"gene_count":0,"genotype_count":0,"name":"obsolete ursolic aldehyde 28-monooxygenase activity (obsolete GO:0102374)","termid":"GO:0102374"}


id: PBO:0003343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator Bag102 (predicted)","termid":"PBO:0003343"}


id: PBO:0080776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 7","termid":"PBO:0080776"}


id: GO:0015864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a pyrimidine nucleoside, a pyrimidine base covalently bonded to a ribose or deoxyribose sugar, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pyrimidine nucleoside transport","termid":"GO:0015864"}


id: PBO:0085612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA repair; related to the human CSA protein that is involved in transcription-coupled repair nucleotide excision repair","termid":"PBO:0085612"}


id: PBO:0066721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 18","termid":"PBO:0066721"}


id: PBO:0054233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1615","termid":"PBO:0054233"}


id: GO:0050262
data:
  {"annotated_genes":["SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109192],"is_not":false,"summary":null,"term":"GO:0050262"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-ribosylnicotinamide + ATP = ADP + 2 H+ + nicotinamide mononucleotide.","definition_xrefs":["EC:2.7.1.22","RHEA:14017","PMID:17914902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ribosylnicotinamide kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02324","MetaCyc:RIBOSYLNICOTINAMIDE-KINASE-RXN","Reactome:R-HSA-8869633","Reactome:R-HSA-8869627","GO:0000816"],"synonyms":[{"name":"ATP:N-ribosylnicotinamide 5'-phosphotransferase activity","type":"related"},{"name":"nicotinamide riboside kinase activity","type":"exact"},{"name":"ribosylnicotinamide kinase (phosphorylating)","type":"related"}],"termid":"GO:0050262","terms_by_termid":{"GO:0050262":null}}


id: PBO:0089567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GEF Sec2","termid":"PBO:0089567"}


id: PBO:0063756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 21","termid":"PBO:0063756"}


id: PBO:0088422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv25","termid":"PBO:0088422"}


id: PBO:0050549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparanase","termid":"PBO:0050549"}


id: PBO:0051669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted formin 2","termid":"PBO:0051669"}


id: PBO:0060002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 22","termid":"PBO:0060002"}


id: PBO:0086999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhodanese domain sulfur transferase; accepts persulfite from Nfs1p and transfers it to Uba4p in the pathway for 2-thiolation of the wobble uridine base of tRNAs; also stimulates sulfur transfer by Nfs1p; involved in metabolism of sterol esters; may be mitochondrially localized","termid":"PBO:0086999"}


id: PR:Q10055
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic initiation factor 4A-III that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00098","PANTHER:PTHR24031:SF143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase fal1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.10","secondary_identifiers":["UniProtKB:Q10055"],"synonyms":[{"name":"Spom972h-EIF4A3","type":"exact"}],"termid":"PR:Q10055"}


id: PBO:0068817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 55, pseudogene","termid":"PBO:0068817"}


id: PBO:0002494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sec7 domain protein, ARF GEF Sec72","termid":"PBO:0002494"}


id: GO:0090606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which microorganisms produce an extracellular matrix and form multicellular aggregates at an air-liquid interface.","definition_xrefs":["GOC:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-species biofilm formation","termid":"GO:0044010"},{"relation_name":"is_a","term_name":"surface biofilm formation","termid":"GO:0090604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species surface biofilm formation","secondary_identifiers":["GO:0032022"],"synonyms":[{"name":"multicellular pellicle formation","type":"related"}],"termid":"GO:0090606"}


id: GO:0009727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an ethylene (ethene) stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to ethylene","termid":"GO:0009723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of ethylene stimulus","synonyms":[{"name":"detection of ethene stimulus","type":"exact"},{"name":"perception of ethene stimulus","type":"related"},{"name":"perception of ethylene stimulus","type":"related"}],"termid":"GO:0009727"}


id: PBO:0051211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-61","termid":"PBO:0051211"}


id: GO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an elaioplast, a leucoplast in which oil is stored.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucoplast organization","termid":"GO:0009659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"elaioplast organization","synonyms":[{"name":"elaioplast organisation","type":"exact"},{"name":"elaioplast organization and biogenesis","type":"related"}],"termid":"GO:0043579"}


id: PBO:0076775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor and KH domain containing","termid":"PBO:0076775"}


id: FYPO:0001294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal actin cortical patch localization","synonyms":[{"name":"normal F-actin patch localization","type":"exact"},{"name":"normal actin cortical patch localisation","type":"exact"},{"name":"normal actin cortical patch localization during mitotic cell cycle","type":"related"},{"name":"normal actin cortical patch localization during vegetative growth","type":"exact"},{"name":"normal actin cortical patch location","type":"related"},{"name":"normal actin patch localization","type":"exact"}],"termid":"FYPO:0001294"}


id: PBO:0071826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 21","termid":"PBO:0071826"}


id: PBO:0047023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A26","termid":"PBO:0047023"}


id: PBO:0058086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4303","termid":"PBO:0058086"}


id: FYPO:0004592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell becomes cut after it has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal mitosis following normal mitosis","termid":"FYPO:0004588"},{"relation_name":"is_a","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype following normal mitosis","termid":"FYPO:0004593"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000032","FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000337","FYPO:0000004"],"is_obsolete":false,"name":"cut following normal mitosis","synonyms":[{"name":"cut following normal mitosis and interphase","type":"exact"},{"name":"cut following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"cut following normal mitosis during vegetative growth","type":"exact"},{"name":"cut following normal mitotic nuclear division","type":"exact"},{"name":"cut following normal nuclear division during mitotic cell cycle","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation with normal mitosis","type":"exact"}],"termid":"FYPO:0004592"}


id: PBO:0005541
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of lithium","termid":"PBO:0005541"}


id: GO:1904417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xenophagy.","definition_xrefs":["GOC:pad","PMID:21617041","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of xenophagy","termid":"GO:1904415"},{"relation_name":"positively_regulates","term_name":"xenophagy","termid":"GO:0098792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044248","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of xenophagy","synonyms":[{"name":"activation of xenophagy","type":"narrow"},{"name":"up regulation of xenophagy","type":"exact"},{"name":"up-regulation of xenophagy","type":"exact"},{"name":"upregulation of xenophagy","type":"exact"}],"termid":"GO:1904417"}


id: PBO:0081807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736","termid":"PBO:0081807"}


id: PBO:0031434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_1-NA-PP1","termid":"PBO:0031434"}


id: GO:0015415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + phosphate(out) = ADP + phosphate + phosphate(in).","definition_xrefs":["EC:7.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled phosphate ion transmembrane transporter activity","secondary_identifiers":["RHEA:24440","MetaCyc:ABC-27-RXN"],"synonyms":[{"name":"ABC phosphate transporter activity","type":"narrow"},{"name":"ATP phosphohydrolase (phosphate-importing)","type":"related"},{"name":"phosphate ABC transporter","type":"narrow"},{"name":"phosphate ion transmembrane-transporting ATPase activity","type":"related"},{"name":"phosphate porter activity","type":"exact"},{"name":"phosphate transporting ATPase activity","type":"exact"},{"name":"phosphate-transporting ATPase activity","type":"related"}],"termid":"GO:0015415"}


id: PBO:0027499
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_oligomycin","termid":"PBO:0027499"}


id: GO:2000007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of metanephric comma-shaped body morphogenesis.","definition_xrefs":["GOC:obol","GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of metanephric comma-shaped body morphogenesis","termid":"GO:2000006"},{"relation_name":"negatively_regulates","term_name":"metanephric comma-shaped body morphogenesis","termid":"GO:0072278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric comma-shaped body morphogenesis","termid":"GO:2000007"}


id: PBO:0041888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated auxiliary subunit delta","termid":"PBO:0041888"}


id: PBO:0040654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal body orientation factor 1","termid":"PBO:0040654"}


id: PR:O74454
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sts5 gene.","definition_xrefs":["UniProtKB:O74454","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sts5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.09","synonyms":[{"name":"Spom972h-sts5","type":"exact"}],"termid":"PR:O74454"}


id: PBO:0001353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase activator (predicted)","termid":"PBO:0001353"}


id: PBO:0083569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF KCC4","termid":"PBO:0083569"}


id: PBO:0028460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_galactose-specific_flocculation","termid":"PBO:0028460"}


id: GO:0009556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the microsporocyte undergoes meiosis, giving rise to four haploid microspores.","definition_xrefs":["GOC:tb","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type sporogenesis","termid":"GO:0048236"},{"relation_name":"part_of","term_name":"pollen development","termid":"GO:0009555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"microsporogenesis","synonyms":[{"name":"microspore development","type":"exact"}],"termid":"GO:0009556"}


id: PBO:0079899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UQCR10 pseudogene 1","termid":"PBO:0079899"}


id: GO:0043103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates hypoxanthine, 6-hydroxy purine, from derivatives of it without de novo synthesis.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase salvage","termid":"GO:0043096"},{"relation_name":"is_a","term_name":"hypoxanthine biosynthetic process","termid":"GO:0046101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"hypoxanthine salvage","synonyms":[{"name":"adenine, hypoxanthine and their nucleoside salvage","type":"narrow"},{"name":"guanine, xanthine and their nucleoside salvage","type":"narrow"}],"termid":"GO:0043103"}


id: PBO:0050882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI2 antisense RNA 1","termid":"PBO:0050882"}


id: GO:0008230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex containing the products of the insect genes Ecdysone receptor (EcR) and ultraspiracle (usp). Binding of ecdysone promotes association between the two subunits, and the receptor complex then initiates molting and metamorphosis by binding DNA and regulating the transcription of target genes.","definition_xrefs":["GOC:bf","PMID:14592980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ecdysone receptor holocomplex","termid":"GO:0008230"}


id: GO:0021811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling between growth factors and their receptors that results in the start of cell movement, where this process is involved in glial-mediated radial migration in the cerebral cortex.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:cls","GOC:jid","PMID:12626695","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motogenic signaling initiating cell movement in cerebral cortex","termid":"GO:0021807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"growth factor signaling initiating cell movement involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"growth factor signaling initiating cell movement involved in cerebral cortex glial-mediated radial migration","type":"exact"},{"name":"growth factor signalling initiating cell movement involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021811"}


id: PBO:0015652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occupancy","termid":"PBO:0015652"}


id: PBO:0050997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 140","termid":"PBO:0050997"}


id: PBO:0040319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit gamma pseudogene 1","termid":"PBO:0040319"}


id: PBO:0035984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_cellular_response_to_hydroxyurea","termid":"PBO:0035984"}


id: GO:0036016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-3 stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-3","termid":"GO:0036015"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-3","synonyms":[{"name":"cellular response to IL-3","type":"exact"}],"termid":"GO:0036016"}


id: PBO:0085102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein putative transcription factor; required for growth of superficial pseudohyphae (which do not invade the agar substrate) but not for invasive pseudohyphal growth; may act together with Phd1p; potential Cdc28p substrate","termid":"PBO:0085102"}


id: PBO:0060529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 2","termid":"PBO:0060529"}


id: PBO:0087350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spindle pole body (SPB) component; required for the insertion of the duplication plaque into the nuclear membrane during SPB duplication; essential for bipolar spindle formation; component of the Mps2p-Bbp1p complex; NBP1 has a paralog, YPR174C, that arose from the whole genome duplication","termid":"PBO:0087350"}


id: PBO:0061909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily AA member 1 pseudogene","termid":"PBO:0061909"}


id: PBO:0053477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 448","termid":"PBO:0053477"}


id: GO:1902084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fumagillin.","definition_xrefs":["PMID:23488861","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fumagillin metabolic process","synonyms":[{"name":"fumagillin metabolism","type":"exact"}],"termid":"GO:1902084"}


id: GO:0052005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of the ethylene-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"modulation by symbiont of host ethylene-mediated defense response","termid":"GO:0052084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host ethylene-mediated defense response","secondary_identifiers":["GO:0052254","GO:0052268","GO:0052070"],"synonyms":[{"name":"down regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"down-regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"downregulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"inhibition by symbiont of host ethylene-mediated defense response","type":"narrow"},{"name":"negative regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway","type":"broad"},{"name":"negative regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"suppression by organism of host ethylene-mediated defense response","type":"exact"},{"name":"suppression by symbiont of host ethylene-mediated defense response","type":"exact"}],"termid":"GO:0052005"}


id: PBO:0048926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin B1","termid":"PBO:0048926"}


id: PBO:0090195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi zinc importer, CDF family, Zrg17","termid":"PBO:0090195"}


id: PBO:0015654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, predicted cell surface protein","termid":"PBO:0015654"}


id: FYPO:0001264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the establishment or maintenance of cell polarity is abnormal during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell polarity","termid":"FYPO:0000026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005568"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0005568"],"is_obsolete":false,"name":"abnormal cell polarity during cellular hyperosmotic response","synonyms":[{"name":"abnormal cell polarity during cellular hyperosmotic response during mitotic cell cycle","type":"related"},{"name":"abnormal cell polarity during cellular hyperosmotic response during vegetative growth","type":"exact"},{"name":"abnormal establishment or maintenance of cell polarity during cellular hyperosmotic response","type":"exact"},{"name":"cell polarity defects during cellular hyperosmotic response","type":"exact"}],"termid":"FYPO:0001264"}


id: MOD:01156
data:
  {"annotated_genes":["SJAG_02763","SJAG_02592","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115572,115573,115309,115311,115312,115310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[115443,115300,115442,115441,115406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00696"}]},"cv_name":"PSI-MOD","definition":"Modified amino acid residue derived from a natural amino acid by a real or hypothetical chemical process.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification","termid":"MOD:00000"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_04551":null},"genotype_count":0,"is_obsolete":false,"name":"protein modification categorized by chemical process","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null},"termid":"MOD:01156","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0036460":null,"GO:0042149":null,"GO:0071475":null,"GO:0120306":null,"GO:1904547":null,"MOD:00046":null,"MOD:00696":null}}


id: PBO:0066084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginyl-tRNA synthetase 1","termid":"PBO:0066084"}


id: PBO:0003666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L36, Rtc6 (predicted)","termid":"PBO:0003666"}


id: PBO:0024819
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains PCB","termid":"PBO:0024819"}


id: SO:0002109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A processed_pseudogene overlapped by locus-specific evidence of transcription.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"processed_pseudogene","termid":"SO:0000043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_processed_pseudogene","synonyms":[{"name":"transcribed processed pseudogene","type":"exact"}],"termid":"SO:0002109"}


id: PBO:0081602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 526","termid":"PBO:0081602"}


id: PBO:0080169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 4","termid":"PBO:0080169"}


id: PBO:0029932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_non-ionic_osmotic_stress","termid":"PBO:0029932"}


id: PBO:0075471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 21","termid":"PBO:0075471"}


id: PBO:0036055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_anaphase_B","termid":"PBO:0036055"}


id: GO:0045721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gluconeogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gluconeogenesis","termid":"GO:0006111"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"gluconeogenesis","termid":"GO:0006094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"negative regulation of gluconeogenesis","synonyms":[{"name":"down regulation of gluconeogenesis","type":"exact"},{"name":"down-regulation of gluconeogenesis","type":"exact"},{"name":"downregulation of gluconeogenesis","type":"exact"},{"name":"inhibition of gluconeogenesis","type":"narrow"}],"termid":"GO:0045721"}


id: PBO:0028348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_CENP-A_containing_chromatin","termid":"PBO:0028348"}


id: GO:0062144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-amino-4-chloropent-4-enoate = chloride + H+ + L-propargylglycine.","definition_xrefs":["RHEA:59892","PMID:30867596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-propargylglycine synthase activity","termid":"GO:0062144"}


id: GO:0045248
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cytosolic complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) (E1), dihydrolipoamide S-succinyltransferase (E2) and dihydrolipoamide dehydrogenase (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2).","definition_xrefs":["PMID:10848975","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic oxoglutarate dehydrogenase complex (obsolete GO:0045248)","termid":"GO:0045248"}


id: PBO:0028337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_CENP-A_containing_nucleosome_assembly","termid":"PBO:0028337"}


id: PBO:0080986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 2","termid":"PBO:0080986"}


id: FYPO:0000300
data:
  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id: PBO:0044978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExH-box helicase 30","termid":"PBO:0044978"}


id: PBO:0056392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase binding protein 1","termid":"PBO:0056392"}


id: PBO:0089741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage ubiquitin-protein ligase E3 Mpe1","termid":"PBO:0089741"}


id: GO:0140486
data:
  {"annotated_genes":["SJAG_01078","SJAG_01803"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89874,89875],"is_not":false,"summary":null,"term":"GO:0140486"}]},"cv_name":"molecular_function","definition":"Binding to a zinc ion to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:12050156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sequestering activity","termid":"GO:0140487"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140313","GO:0003674"],"is_obsolete":false,"name":"zinc ion sequestering activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140486","terms_by_termid":{"GO:0140486":null}}


id: FYPO:0004468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is decreased during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cell tip during cellular response to salt stress","synonyms":[{"name":"decreased protein localisation to cell tip during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to cell end during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to cell tip during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell tip during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced protein localization to cell tip during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0004468"}


id: GO:0120109
data:
  {"annotated_genes":["SJAG_03092","SJAG_01263","SJAG_01777","SJAG_01837","SJAG_01067","SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112761],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120110"},{"annotations":[95228,85887,101182,102033,112956],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044820"}]},"cv_name":"biological_process","definition":"The process in which the telomeres are gathered together to a small number of foci per chromosome (usually one per chromosome or fewer), and moved to and tethered at the nuclear periphery, as part of a mitotic cell cycle.","definition_xrefs":["PMID:25778919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere localization","termid":"GO:0034397"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01067":null,"SJAG_01263":null,"SJAG_01601":null,"SJAG_01777":null,"SJAG_01837":null,"SJAG_03092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitotic telomere clustering and tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120109","terms_by_termid":{"GO:0044820":null,"GO:0120110":null}}


id: PBO:0004988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalase","termid":"PBO:0004988"}


id: PBO:0062538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 3 pseudogene","termid":"PBO:0062538"}


id: GO:0000178
data:
  {"annotated_genes":["SJAG_04006","SJAG_02991","SJAG_04321","SJAG_04818","SJAG_03745","SJAG_01191","SJAG_04084","SJAG_04153","SJAG_01818","SJAG_03179","SJAG_04824","SJAG_01431","SJAG_01521","SJAG_00854"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88330,89158,92013,93351,98172,100487,101331,102538,103536,111518,111965,114354],"is_not":false,"summary":null,"term":"GO:0000178"},{"annotations":[111963,102536,92011,103535,114352,101329,98170,93349,100485,89157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000177"},{"annotations":[95049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045025"},{"annotations":[101332,103537,97132,93352,89159,92014,111966,102539,88332,98173,100488,111519,114355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000176"}]},"cv_name":"cellular_component","definition":"A ribonuclease complex that has 3-prime to 5-prime exoribonuclease activity and possibly endoribonuclease activity, producing 5-prime-phosphomonoesters. Participates in a multitude of cellular RNA processing and degradation events preventing nuclear export and/or translation of aberrant RNAs. Restricted to processing linear and circular single-stranded RNAs (ssRNA) only. RNAs with complex secondary structures may have to be unwound or pre-processed by co-factors prior to entering the complex, esp if the 3-prime end is structured.","definition_xrefs":["PMID:17174896","PMID:20531386","PMID:26726035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exoribonuclease complex","termid":"GO:1905354"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_02991":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"exosome (RNase complex)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"exosome (ribonucleasease complex)","type":"exact"},{"name":"exosome multienzyme ribonuclease complex","type":"exact"}],"termid":"GO:0000178","terms_by_termid":{"GO:0000176":null,"GO:0000177":null,"GO:0000178":null,"GO:0045025":null}}


id: PBO:0090833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S25","termid":"PBO:0090833"}


id: FYPO:0002383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 9 and 14 of histone H3 in regions of the genome that are actively transcribed occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:23851719"],"gene_count":0,"genotype_count":0,"name":"obsolete increased histone H3-K9 and H3-K14 acetylation at centromere outer repeat during vegetative growth (obsolete FYPO:0002383)","synonyms":[{"name":"increased histone H3 acetylation (K9 and K14) at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 and H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 and H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 and H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 and H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H3-K9 and H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3K9 and H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002383"}


id: PBO:0043847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase X, M14 family member 2","termid":"PBO:0043847"}


id: GO:0001315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["PMID:12044938","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to reactive oxygen species (obsolete GO:0001315)","synonyms":[{"name":"age-dependent response to AOS","type":"exact"},{"name":"age-dependent response to ROI","type":"exact"},{"name":"age-dependent response to ROS","type":"exact"},{"name":"age-dependent response to active oxygen species","type":"exact"},{"name":"age-dependent response to reactive oxidative species","type":"exact"},{"name":"age-dependent response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:0001315"}


id: GO:0072281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal stem cell that contributes to the shaping of a nephronin the metanephros. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation involved in nephron morphogenesis","termid":"GO:0072037"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell differentiation involved in metanephric nephron morphogenesis","termid":"GO:0072281"}


id: PBO:0031587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_phenotype","termid":"PBO:0031587"}


id: PBO:0073539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing ring finger 1","termid":"PBO:0073539"}


id: PBO:0069810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1096, pseudogene","termid":"PBO:0069810"}


id: PBO:0055030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2445","termid":"PBO:0055030"}


id: PBO:0040366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 3","termid":"PBO:0040366"}


id: GO:0004875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with any component or product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:11884446","GOC:add","GOC:signaling","GOC:ai","ISBN:0781735149","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"complement receptor activity","secondary_identifiers":["GO:0004942"],"synonyms":[{"name":"anaphylatoxin receptor activity","type":"related"}],"termid":"GO:0004875"}


id: PBO:0029191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-excess_intracellular_endomembrane_system_present","termid":"PBO:0029191"}


id: GO:0010801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of peptidyl-threonine phosphorylation. Peptidyl-threonine phosphorylation is the phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of peptidyl-threonine phosphorylation","termid":"GO:0010799"},{"relation_name":"negatively_regulates","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-threonine phosphorylation","termid":"GO:0010801"}


id: GO:1902870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amacrine cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:16872597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of amacrine cell differentiation","termid":"GO:1902869"},{"relation_name":"negatively_regulates","term_name":"amacrine cell differentiation","termid":"GO:0035881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amacrine cell differentiation","synonyms":[{"name":"down regulation of amacrine cell differentiation","type":"exact"},{"name":"down regulation of amacrine neuron differentiation","type":"exact"},{"name":"down-regulation of amacrine cell differentiation","type":"exact"},{"name":"down-regulation of amacrine neuron differentiation","type":"exact"},{"name":"downregulation of amacrine cell differentiation","type":"exact"},{"name":"downregulation of amacrine neuron differentiation","type":"exact"},{"name":"inhibition of amacrine cell differentiation","type":"narrow"},{"name":"inhibition of amacrine neuron differentiation","type":"narrow"},{"name":"negative regulation of amacrine neuron differentiation","type":"exact"}],"termid":"GO:1902870"}


id: PBO:0070669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 40","termid":"PBO:0070669"}


id: PBO:0035696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of,_positive_effect","termid":"PBO:0035696"}


id: PBO:0003030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human COMT ortholog 2","termid":"PBO:0003030"}


id: PBO:0078134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 13-2","termid":"PBO:0078134"}


id: PBO:0050235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 13","termid":"PBO:0050235"}


id: PBO:0069535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 805, pseudogene","termid":"PBO:0069535"}


id: PBO:0048095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 16","termid":"PBO:0048095"}


id: PBO:0079172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 1","termid":"PBO:0079172"}


id: SO:0000963
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, linear RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"linear","termid":"SO:0000987"},{"relation_name":"is_a","term_name":"single_stranded_RNA_chromosome","termid":"SO:0000962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_single_stranded_RNA_chromosome","synonyms":[{"name":"linear single stranded RNA chromosome","type":"exact"}],"termid":"SO:0000963"}


id: GO:0050942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pigment cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"positively_regulates","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pigment cell differentiation","synonyms":[{"name":"activation of pigment cell differentiation","type":"narrow"},{"name":"stimulation of pigment cell differentiation","type":"narrow"},{"name":"up regulation of pigment cell differentiation","type":"exact"},{"name":"up-regulation of pigment cell differentiation","type":"exact"},{"name":"upregulation of pigment cell differentiation","type":"exact"}],"termid":"GO:0050942"}


id: GO:0008296
data:
  {"annotated_genes":["SJAG_01163","SJAG_02298","SJAG_05373","SJAG_02818","SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101310,105205],"is_not":false,"summary":null,"term":"GO:0008296"},{"annotations":[84686,106047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[103449,84689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of a DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5' exonuclease activity","termid":"GO:0008408"},{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01163":null,"SJAG_02298":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0016788","GO:0003824","GO:0016787","GO:0003674","GO:0004527"],"is_obsolete":false,"name":"3'-5'-DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9023943"],"synonyms":[{"name":"3'-5' exodeoxyribonuclease activity","type":"exact"},{"name":"3'-5'-exodeoxyribonuclease activity","type":"exact"}],"termid":"GO:0008296","terms_by_termid":{"GO:0008296":null,"GO:0008310":null,"GO:0008311":null}}


id: GO:0052643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chlorophyllides, any chlorophyll lacking the terpenoid side chain such as phytyl or farnesyl.","definition_xrefs":["PMID:7724548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll metabolic process","termid":"GO:0015994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"chlorophyllide metabolic process","synonyms":[{"name":"chlorophyllide metabolism","type":"exact"}],"termid":"GO:0052643"}


id: GO:0036408
data:
  {"annotated_genes":["SJAG_02773","SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86870,87517],"is_not":false,"summary":null,"term":"GO:0036408"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 14) = CoA + histone H3 N6-acetyl-L-lysine (position 14).","definition_xrefs":["GOC:vw","PMID:18552846","PMID:19056256","PMID:21289066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02165":null,"SJAG_02773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016746","GO:0034212","GO:0016740"],"is_obsolete":false,"name":"histone H3K14 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K14 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K14 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K14 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K14 specific)","type":"exact"}],"termid":"GO:0036408","terms_by_termid":{"GO:0036408":null}}


id: GO:0051482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the concentration of calcium ions in the cytosol that occurs as part of a PLC-activating G protein-coupled receptor signaling pathway. G-protein-activated PLC hydrolyses phosphatidylinositol-bisphosphate (PIP2) to release diacylglycerol (DAG) and inositol trisphosphate (IP3). IP3 then binds to calcium release channels in the endoplasmic reticulum (ER) to trigger calcium ion release into the cytosol.","definition_xrefs":["GOC:signaling","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway (obsolete GO:0051482)","synonyms":[{"name":"elevation of calcium ion concentration in cytoplasm during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of calcium ion concentration in cytosol during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"related"},{"name":"elevation of cytoplasmic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of cytoplasmic calcium ion concentration during G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of cytosolic calcium ion concentration during G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"related"},{"name":"elevation of cytosolic calcium ion concentration involved in G-protein signaling coupled to IP3 second messenger","type":"exact"},{"name":"elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway","type":"exact"},{"name":"positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway","type":"exact"}],"termid":"GO:0051482"}


id: PBO:0087680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mitochondrial (mt) i-AAA protease supercomplex; i-AAA degrades misfolded mitochondrial proteins; forms a subcomplex with Mgr1p that binds to substrates to facilitate proteolysis; required for growth of cells lacking mtDNA","termid":"PBO:0087680"}


id: GO:0032435
data:
  {"annotated_genes":["SJAG_03048","SJAG_00052","SJAG_00475"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86517,103038],"is_not":false,"summary":null,"term":"GO:0032435"},{"annotations":[98464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032434"},{"relation_name":"is_a","term_name":"negative regulation of proteasomal protein catabolic process","termid":"GO:1901799"},{"relation_name":"is_a","term_name":"negative regulation of ubiquitin-dependent protein catabolic process","termid":"GO:2000059"},{"relation_name":"negatively_regulates","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteasomal ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"down-regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"downregulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"inhibition of proteasomal ubiquitin-dependent protein catabolic process","type":"narrow"}],"termid":"GO:0032435","terms_by_termid":{"GO:0032435":null,"GO:1905785":null}}


id: PBO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR48 family Bun107","termid":"PBO:0000346"}


id: GO:0015216
data:
  {"annotated_genes":["SJAG_00612","SJAG_02050","SJAG_03452","SJAG_00760","SJAG_04325","SJAG_04328","SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[97456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[102790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[106988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[86940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"},{"annotations":[111237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001409"},{"annotations":[88995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051724"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a purine nucleotide, any compound consisting of a purine nucleoside esterified with (ortho)phosphate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_04325":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"purine nucleotide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015216","terms_by_termid":{"GO:0001409":null,"GO:0005471":null,"GO:0008521":null,"GO:0015228":null,"GO:0046964":null,"GO:0051724":null,"GO:0140987":null,"GO:1902557":null}}


id: GO:0018269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-serine ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a seryl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GPI anchor biosynthetic process","termid":"GO:0006506"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0042158"],"is_obsolete":false,"name":"GPI anchor biosynthetic process via N-seryl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPI anchor anabolism via N-seryl-glycosylphosphatidylinositolethanolamine","type":"exact"},{"name":"GPI anchor formation via N-seryl-glycosylphosphatidylinositolethanolamine","type":"exact"},{"name":"GPI anchor synthesis via N-seryl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"GO:0018269"}


id: SO:0000739
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a plastid such as a chloroplast. The nucleomorph is the nuclei of the plastic.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleomorphic_sequence","synonyms":[{"name":"nucleomorphic sequence","type":"exact"}],"termid":"SO:0000739"}


id: GO:0062195
data:
  {"annotated_genes":["SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93398],"is_not":false,"summary":null,"term":"GO:0062195"}]},"cv_name":"biological_process","definition":"The organization process that preserves a microtubule bundle in a stable functional or structural state.","definition_xrefs":["PMID:18061564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule bundle maintenance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062195","terms_by_termid":{"GO:0062195":null}}


id: GO:0015100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of vanadium (V) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"vanadium ion transmembrane transporter activity","termid":"GO:0015100"}


id: PBO:0075649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain containing 4","termid":"PBO:0075649"}


id: GO:0038040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Activation of one protomer of a consequence of a G protein-coupled (GPCR) heterodimer by the associated subunit. For example, agonist occupancy in one protomer of a GPCR dimer may activate the associated promoter.","definition_xrefs":["GOC:al","GOC:bf","PMID:21063387"],"gene_count":0,"genotype_count":0,"name":"obsolete cross-receptor activation within G-protein coupled receptor heterodimer (obsolete GO:0038040)","termid":"GO:0038040"}


id: PBO:0070302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 8","termid":"PBO:0070302"}


id: PBO:0029556
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_polynucleotide_3'-phosphatase_activity","termid":"PBO:0029556"}


id: PBO:0005904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamic acid, mitochondrial","termid":"PBO:0005904"}


id: FYPO:0002515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated, branched germ tube, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"},{"relation_name":"is_a","term_name":"inviable branched, elongated vegetative cell","termid":"FYPO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with branched, elongated germ tube","synonyms":[{"name":"inviable after spore germination, without cell division, branched, elongated cell","type":"exact"},{"name":"inviable following spore germination with elongated, branched germ tube","type":"exact"},{"name":"inviable germinated spore, without cell division, with elongated, branched germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with branched, elongated germ tube","type":"exact"}],"termid":"FYPO:0002515"}


id: PBO:0070199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 124 pseudogene","termid":"PBO:0070199"}


id: GO:0008564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + protein+(in) -> ADP + phosphate + protein+(out); drives the concomitant secretion of proteins.","definition_xrefs":["PMID:30346996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-transporting ATPase activity","termid":"GO:0015450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674","GO:0140318"],"is_obsolete":false,"name":"protein-exporting ATPase activity","secondary_identifiers":["EC:7.4.2.8","MetaCyc:3.6.3.50-RXN"],"synonyms":[{"name":"ATPase-coupled protein transporter activity","type":"exact"}],"termid":"GO:0008564"}


id: PBO:0091740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA nam1","termid":"PBO:0091740"}


id: PBO:0027995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_mitotic_G1_phase","termid":"PBO:0027995"}


id: PATO:0000519
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000519 humidity sensitivity value (obsolete PATO:0000519)","termid":"PATO:0000519"}


id: PBO:0017559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSIF transcription elongation factor complex subunit Spt5","termid":"PBO:0017559"}


id: PBO:0070783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 13","termid":"PBO:0070783"}


id: PBO:0049686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine ammonia-lyase","termid":"PBO:0049686"}


id: FYPO:0003826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is elongated, has two nuclei but no septum, and the mitotic cell cycle is arrested with nuclei at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable binucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition before cell separation","termid":"FYPO:0003825"},{"relation_name":"is_a","term_name":"inviable elongated binucleate aseptate cell","termid":"FYPO:0004684"},{"relation_name":"is_a","term_name":"inviable elongated cell with cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0007702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000032","FYPO:0000004","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated binucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition before cell separation","synonyms":[{"name":"inviable cell with nuclear division arrest at G2/M without septation (elongated cell)","type":"exact"},{"name":"inviable elongated binucleate aseptate cell with mitotic G2/M phase transition arrest before cell separation","type":"exact"},{"name":"inviable elongated binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cell separation","type":"related"},{"name":"inviable elongated binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cell separation during mitotic cell cycle","type":"related"},{"name":"inviable elongated binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cytokinesis","type":"exact"},{"name":"inviable elongated binucleate aseptate cell with mitotic cell cycle arrest at mitotic G2/M phase transition before cell separation during vegetative growth","type":"exact"},{"name":"inviable elongated binucleate cell with mitotic cell cycle arrest at G2/M before division septum assembly","type":"exact"},{"name":"inviable elongated binucleate cell with mitotic cell cycle arrest before septation","type":"exact"},{"name":"lethal; elongated binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cell separation","type":"exact"},{"name":"mitotic G2/M arrest after failed cytokinesis, with inviable elongated cell","type":"related"},{"name":"mitotic cell cycle arrest at G2/M before cell separation with inviable elongated binucleate aseptate cell","type":"exact"}],"termid":"FYPO:0003826"}


id: GO:2000314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040037"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:2000313"},{"relation_name":"negatively_regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"negative regulation of fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:2000314"}


id: PBO:0044433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily A member 27, pseudogene","termid":"PBO:0044433"}


id: GO:0048516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Processes causing the differentiation of an epidermal cell into a trichome cell; as in, but not restricted to, the flowering plants (Magnoliophyta, ncbi_taxonomy_id:3398).","definition_xrefs":["GOC:lr"],"gene_count":0,"genotype_count":0,"name":"obsolete trichome initiation (sensu Magnoliophyta) (obsolete GO:0048516)","synonyms":[{"name":"trichome initiation (sensu Magnoliophyta)","type":"exact"}],"termid":"GO:0048516"}


id: PBO:0004294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase regulator Est1","termid":"PBO:0004294"}


id: GO:0002804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antifungal peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide production","termid":"GO:0002225"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide production","termid":"GO:0002788"},{"relation_name":"positively_regulates","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of antifungal peptide production","synonyms":[{"name":"activation of antifungal peptide production","type":"narrow"},{"name":"stimulation of antifungal peptide production","type":"narrow"},{"name":"up regulation of antifungal peptide production","type":"exact"},{"name":"up-regulation of antifungal peptide production","type":"exact"},{"name":"upregulation of antifungal peptide production","type":"exact"}],"termid":"GO:0002804"}


id: PBO:0068468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 45, pseudogene","termid":"PBO:0068468"}


id: PBO:0052964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L1 cell adhesion molecule","termid":"PBO:0052964"}


id: FYPO:0005316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 in subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PMID:22771823","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K12 acetylation during vegetative growth","termid":"FYPO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at subtelomere during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K12 acetylation at subtelomeric region during vegetative growth","type":"exact"},{"name":"increased histone H4K12 acetylation at subtelomere during vegetative growth","type":"exact"},{"name":"increased subtelomeric histone H4K12 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005316"}


id: GO:0009936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A group of proteins located within the cell walls of plants, both dicots and grasses, that play an essential role in loosening cell walls during cell growth. They are hydrophobic, non glycosylated proteins of about 30kDa.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete expansin (obsolete GO:0009936)","synonyms":[{"name":"expansin","type":"exact"}],"termid":"GO:0009936"}


id: GO:0050407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [glycogen-synthase D] + H2O = [glycogen-synthase I] + phosphate.","definition_xrefs":["EC:3.1.3.42","MetaCyc:GLYCOGEN-SYNTHASE-D-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016787","GO:0016788","GO:0004721"],"is_obsolete":false,"name":"[glycogen-synthase-D] phosphatase activity","synonyms":[{"name":"Mg2+ dependent glycogen synthase phosphatase activity","type":"related"},{"name":"UDP-glucose:glycogen 4-alpha-D-glucosyltransferase-D phosphohydrolase activity","type":"related"},{"name":"UDP-glycogen glucosyltransferase phosphatase activity","type":"related"},{"name":"UDPglucose-glycogen glucosyltransferase phosphatase activity","type":"related"},{"name":"UDPglucose:glycogen 4-alpha-D-glucosyltransferase-D phosphohydrolase activity","type":"related"},{"name":"glycogen glucosyltransferase phosphatase activity","type":"related"},{"name":"glycogen synthase D phosphatase activity","type":"related"},{"name":"glycogen synthase phosphatase activity","type":"related"},{"name":"glycogen synthetase phosphatase activity","type":"related"},{"name":"glycogen-synthase-D phosphatase activity","type":"related"},{"name":"phosphatase type 2oC","type":"related"},{"name":"uridine diphosphoglucose-glycogen glucosyltransferase phosphatase activity","type":"related"}],"termid":"GO:0050407"}


id: GO:0019099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in a female organism's germ line.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary sex determination, germ-line","termid":"GO:0007542"},{"relation_name":"is_a","term_name":"germ-line sex determination","termid":"GO:0018992"},{"relation_name":"is_a","term_name":"female sex determination","termid":"GO:0030237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line sex determination","secondary_identifiers":["GO:0007544"],"synonyms":[{"name":"sex determination, female germ-line determination","type":"exact"}],"termid":"GO:0019099"}


id: FYPO:0005747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype","termid":"FYPO:0000149"},{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein transport","termid":"FYPO:0005747"}


id: PBO:0043842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase vitellogenic like","termid":"PBO:0043842"}


id: GO:0099501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an exocytic vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"part_of","term_name":"exocytic vesicle","termid":"GO:0070382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"exocytic vesicle membrane","synonyms":[{"name":"secretory vesicle membrane","type":"broad"}],"termid":"GO:0099501"}


id: PBO:0089097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF13 family homolog, unknown biological role","termid":"PBO:0089097"}


id: FYPO:0000917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of citrate (Si)-synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal citrate (Si)-synthase activity","synonyms":[{"name":"abnormal citrate synthase activity","type":"broad"}],"termid":"FYPO:0000917"}


id: GO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell gliding that results from the actions of cell surface adhesin proteins that are propelled by membrane motor proteins.","definition_xrefs":["PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell gliding","termid":"GO:0071976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell surface adhesin-mediated gliding motility","termid":"GO:0071980"}


id: PBO:0047699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLYWCH family member 2","termid":"PBO:0047699"}


id: GO:0052816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acyl-CoA + H2O = a long-chain fatty acid + CoA + H+. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["RHEA:67680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"long-chain fatty acyl-CoA hydrolase activity","synonyms":[{"name":"long-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"long-chain acyl-thioester hydrolase activity","type":"related"},{"name":"long-chain hydrolase activity","type":"related"},{"name":"long-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0052816"}


id: PATO:0001546
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity characterized by particles arranged such that their shape and volume are relatively stable.","definition_xrefs":["Chemistry:http://chemistry.about.com/od/chemistryglossary/a/soliddefinition.htm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a substance","termid":"PATO:0002198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality of a solid","synonyms":[{"name":"solidity","type":"exact"}],"termid":"PATO:0001546"}


id: PBO:0054203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1583","termid":"PBO:0054203"}


id: PBO:0031350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_at_low_temperature","termid":"PBO:0031350"}


id: PBO:0069720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1000, pseudogene","termid":"PBO:0069720"}


id: FYPO:0001319
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115426,115427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[115419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"},{"annotations":[115302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[115247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"},{"annotations":[115417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000596"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific cellular process is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"},{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"},{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null,"SJAG_04883":null},"genotype_count":5,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03118"],"name":"normal cellular process during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:35226668":null,"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_04883","SJAG_03689"],"single_locus_genotype_uniquenames":["ptp4delta","mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","dcr1delta"],"synonyms":[{"name":"normal cellular process during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001319","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000596":null,"FYPO:0000644":null,"FYPO:0001007":null,"FYPO:0006989":null,"FYPO_EXT:0000001":null}}


id: PBO:0080269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 32 pseudogene","termid":"PBO:0080269"}


id: GO:0007439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ectodermal digestive tract over time, from its formation to the mature structure. The ectodermal digestive tract includes those portions that are derived from ectoderm.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal digestive tract development","synonyms":[{"name":"ectodermal gut development","type":"related"}],"termid":"GO:0007439"}


id: PBO:0038459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptotic BCL2L1-antisense long non-coding RNA","termid":"PBO:0038459"}


id: PR:O14362
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- smi1 gene.","definition_xrefs":["UniProtKB:O14362","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall biosynthesis/cell cycle regulator smi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.17c","synonyms":[{"name":"Spom972h-smi1","type":"exact"}],"termid":"PR:O14362"}


id: PBO:0052877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 8-2, pseudogene","termid":"PBO:0052877"}


id: PATO:0000617
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having one or more angle(s) in its length.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bent","termid":"PATO:0000617"}


id: PBO:0076815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM2 antisense RNA 2","termid":"PBO:0076815"}


id: GO:0097475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a motor neuron from one site to another. A motor neuron is an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.","definition_xrefs":["PMID:20711475","CL:0000100","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"motor neuron migration","termid":"GO:0097475"}


id: FYPO:0002130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to heat","synonyms":[{"name":"abolished protein phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to heat shock","type":"narrow"},{"name":"protein phosphorylation abolished during cellular response to heat","type":"exact"}],"termid":"FYPO:0002130"}


id: PBO:0078466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-4","termid":"PBO:0078466"}


id: PBO:0041173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B and T lymphocyte associated","termid":"PBO:0041173"}


id: PBO:0054220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1601","termid":"PBO:0054220"}


id: GO:1990374
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A inward rectifier potassium channel complex. Homo- or heterotetramer composed of subunits of the eukaryotic Kir2 protein family. Plays a key role in maintaining the correct resting potential in eukaryotic cells.","definition_xrefs":["PMID:16834334","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inward rectifier potassium channel complex","termid":"GO:1902937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"Kir2 inward rectifier potassium channel complex","synonyms":[{"name":"Kir2.1 complex","type":"narrow"}],"termid":"GO:1990374"}


id: PBO:0053591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 618","termid":"PBO:0053591"}


id: GO:0015159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of polysaccharides from one side of a membrane to the other. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"polysaccharide transmembrane transporter activity","termid":"GO:0015159"}


id: PBO:0044215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTTN divergent transcript","termid":"PBO:0044215"}


id: PBO:0074841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 34","termid":"PBO:0074841"}


id: GO:0010320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide linkages in oligopeptides or polypeptides by a reaction mechanism in which arginine or lysine residues act as nucleophiles.","definition_xrefs":["GOC:tair_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete arginine/lysine endopeptidase activity (obsolete GO:0010320)","synonyms":[{"name":"arginine/lysine endopeptidase activity","type":"exact"}],"termid":"GO:0010320"}


id: GO:0003720
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104030,104031],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0003721"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes extension of the 3'- end of a DNA strand by one deoxynucleotide at a time using an internal RNA template that encodes the telomeric repeat sequence.","definition_xrefs":["GOC:krc","PMID:28732250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed DNA polymerase activity","termid":"GO:0003964"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"telomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-164617","Reactome:R-HSA-163090"],"termid":"GO:0003720","terms_by_termid":{"GO:0003721":null}}


id: PBO:0076409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 5 like","termid":"PBO:0076409"}


id: GO:0014835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized satellite cell acquires specialized features of a myoblast. This occurs as part of skeletal muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","PMID:16607119","CL:0000056","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast differentiation","termid":"GO:0045445"},{"relation_name":"part_of","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast differentiation involved in skeletal muscle regeneration","termid":"GO:0014835"}


id: PBO:0047059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120A","termid":"PBO:0047059"}


id: GO:1903060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein lipidation.","definition_xrefs":["PMID:21909394","GO_REF:0000058","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"negative regulation of lipoprotein metabolic process","termid":"GO:0050748"},{"relation_name":"is_a","term_name":"regulation of protein lipidation","termid":"GO:1903059"},{"relation_name":"negatively_regulates","term_name":"protein lipidation","termid":"GO:0006497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein lipidation","synonyms":[{"name":"down regulation of lipid:protein modification","type":"exact"},{"name":"down regulation of protein amino acid lipidation","type":"exact"},{"name":"down regulation of protein lipidation","type":"exact"},{"name":"down-regulation of lipid:protein modification","type":"exact"},{"name":"down-regulation of protein amino acid lipidation","type":"exact"},{"name":"down-regulation of protein lipidation","type":"exact"},{"name":"downregulation of lipid:protein modification","type":"exact"},{"name":"downregulation of protein amino acid lipidation","type":"exact"},{"name":"downregulation of protein lipidation","type":"exact"},{"name":"inhibition of lipid:protein modification","type":"narrow"},{"name":"inhibition of protein amino acid lipidation","type":"narrow"},{"name":"inhibition of protein lipidation","type":"narrow"},{"name":"negative regulation of lipid:protein modification","type":"exact"},{"name":"negative regulation of protein amino acid lipidation","type":"exact"}],"termid":"GO:1903060"}


id: PBO:0082715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the NuA3b histone acetyltransferase complex; regulates interaction between NuA3b and H3K36me3 at the transcribed regions of genes; contains PWWP domain; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO); protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082715"}


id: GO:0018166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The ATP-dependent addition of a tyrosine residue to the C-terminus of a protein; typically the addition of tyrosine to the C-terminus of detyrosinated alpha-tubulin by the enzyme tubulin-tyrosine ligase.","definition_xrefs":["RESID:AA0257"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal protein-tyrosinylation (obsolete GO:0018166)","termid":"GO:0018166"}


id: GO:0030616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A TGF-beta cytoplasmic mediator that forms a complex with a phosphorylated pathway-specific mediator. The heterocomplex translocates to the nucleus to regulate transcription.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor, common-partner cytoplasmic mediator activity (obsolete GO:0030616)","synonyms":[{"name":"TGF-beta receptor, common-partner cytoplasmic mediator activity","type":"exact"},{"name":"TGFbeta receptor, common-partner cytoplasmic mediator activity","type":"exact"},{"name":"co-SMAD protein","type":"related"},{"name":"common mediator SMAD protein","type":"related"},{"name":"common partner SMAD protein","type":"related"},{"name":"common-mediator SMAD protein","type":"related"},{"name":"common-partner SMAD protein","type":"related"}],"termid":"GO:0030616"}


id: GO:0046775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any viral process that results in the inhibition of host cell cytokine production.","definition_xrefs":["PMID:10859382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"modulation by virus of host cytokine production","termid":"GO:0044831"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host cytokine production","termid":"GO:0140133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"suppression by virus of host cytokine production","synonyms":[{"name":"negative regulation by virus of host cytokine production","type":"exact"}],"termid":"GO:0046775"}


id: PBO:0059035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 24","termid":"PBO:0059035"}


id: PBO:0065244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 15 like","termid":"PBO:0065244"}


id: PBO:0011462
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.958","termid":"PBO:0011462"}


id: GO:2001088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a trisaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"trisaccharide transport","termid":"GO:2001088"}


id: PBO:0055779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LON peptidase N-terminal domain and ring finger 1","termid":"PBO:0055779"}


id: PR:Q9P7Y0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssr4 gene.","definition_xrefs":["UniProtKB:Q9P7Y0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit ssr4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.05","synonyms":[{"name":"Spom972h-ssr4","type":"exact"}],"termid":"PR:Q9P7Y0"}


id: PBO:0063606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet factor 4","termid":"PBO:0063606"}


id: GO:2000973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pro-B cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphoid progenitor cell differentiation","termid":"GO:1905456"},{"relation_name":"regulates","term_name":"pro-B cell differentiation","termid":"GO:0002328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pro-B cell differentiation","synonyms":[{"name":"regulation of pro-B cell development","type":"related"},{"name":"regulation of pro-B lymphocyte differentiation","type":"exact"}],"termid":"GO:2000973"}


id: PATO:0000231
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000231 reflex (obsolete PATO:0000231)","termid":"PATO:0000231"}


id: PBO:0005162
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING finger protein","termid":"PBO:0005162"}


id: GO:0014814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of axons following their loss or damage at the neuromuscular junction. Motor axons regenerate after injury and they form neuro-muscular junctions with skeletal myofibers similar to normal ones.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon regeneration at neuromuscular junction","termid":"GO:0014814"}


id: PATO:0001311
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration of temperature which is lesser relative to the normal or average enduring or continuing in time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased duration","termid":"PATO:0000499"},{"relation_name":"is_a","term_name":"duration of temperature","termid":"PATO:0001310"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased duration of temperature","termid":"PATO:0001311"}


id: GO:0102809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + delphinidin 3-O-beta-D-glucoside = H+ + delphinidin 3-O-sophoroside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete delphinidin 3-O-glucoside 2''-O-glucosyltransferase activity (obsolete GO:0102809)","termid":"GO:0102809"}


id: PBO:0075752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP receptor subunit alpha","termid":"PBO:0075752"}


id: PBO:0001682
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly at damage sites is facilitated by Swi5 independently of Rhp57","termid":"PBO:0001682"}


id: GO:0036064
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-tethered, short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum) that is similar in structure to a centriole and derives from it. The cilium basal body is the site of assembly and remodeling of the cilium and serves as a nucleation site for axoneme growth. As well as anchoring the cilium, it is thought to provide a selective gateway regulating the entry of ciliary proteins and vesicles by intraflagellar transport.","definition_xrefs":["PMID:21750193","GOC:clt","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"ciliary basal body","secondary_identifiers":["NIF_Subcellular:sao11978067","GO:0005932"],"synonyms":[{"name":"basal body","type":"broad"},{"name":"cilial basal body","type":"exact"},{"name":"cilium basal body","type":"exact"},{"name":"kinetosome","type":"exact"},{"name":"microtubule basal body","type":"exact"}],"termid":"GO:0036064"}


id: GO:0047591
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxypentanoate + acetyl-CoA = 5-hydroxy-pentanoyl-CoA + acetate.","definition_xrefs":["RHEA:23496","EC:2.8.3.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"5-hydroxypentanoate CoA-transferase activity","secondary_identifiers":["KEGG_REACTION:R04057","MetaCyc:5-HYDROXYPENTANOATE-COA-TRANSFERASE-RXN"],"synonyms":[{"name":"5-hydroxyvalerate CoA-transferase activity","type":"related"},{"name":"5-hydroxyvalerate coenzyme A transferase activity","type":"related"},{"name":"acetyl-CoA:5-hydroxypentanoate CoA-transferase activity","type":"related"}],"termid":"GO:0047591"}


id: PBO:0039224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 7 member A3","termid":"PBO:0039224"}


id: PBO:0078433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-3","termid":"PBO:0078433"}


id: PBO:0046691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETHE1 persulfide dioxygenase","termid":"PBO:0046691"}


id: GO:0140883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus activates or increases the frequency, rate or extent of reticulophagy in the host.","definition_xrefs":["PMID:35239449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction by virus of host autophagy","termid":"GO:0039520"},{"relation_name":"is_a","term_name":"positive regulation of reticulophagy","termid":"GO:0140501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044248","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"induction by virus of host reticulophagy","synonyms":[{"name":"activation of host reticulophagy by virus","type":"exact"},{"name":"positive regulation by virus of host reticulophagy","type":"broad"}],"termid":"GO:0140883"}


id: FYPO:0001379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tacrolimus than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to tacrolimus","synonyms":[{"name":"resistance to FK506","type":"exact"},{"name":"resistance to tacrolimus during mitotic cell cycle","type":"related"},{"name":"resistance to tacrolimus during vegetative growth","type":"exact"},{"name":"resistant to tacrolimus","type":"exact"}],"termid":"FYPO:0001379"}


id: PBO:0051703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INPP5B antisense RNA 1","termid":"PBO:0051703"}


id: GO:0071990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location at the spindle pole body, and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"maintenance of protein localization in organelle","termid":"GO:0072595"},{"relation_name":"part_of","term_name":"spindle pole body organization","termid":"GO:0051300"},{"relation_name":"part_of","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0007049","GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location to spindle pole body","synonyms":[{"name":"maintenance of protein location at spindle pole body","type":"exact"},{"name":"maintenance of protein location in spindle pole body","type":"exact"}],"termid":"GO:0071990"}


id: GO:0070949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a symbiont cell, the directed killing of a symbiont target cell by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"regulation of killing of cells of another organism","termid":"GO:0051709"},{"relation_name":"is_a","term_name":"regulation of neutrophil mediated cytotoxicity","termid":"GO:0070948"},{"relation_name":"regulates","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070949"}


id: MOD:01292
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00075. Map to MOD:00075.","definition_xrefs":["Unimod:529"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01292 dimethylation of proline residue (obsolete MOD:01292)","synonyms":[{"name":"Delta:H(5)C(2)","type":"related"},{"name":"Dimethylation of proline residue","type":"related"}],"termid":"MOD:01292"}


id: GO:0036414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolysis of peptidyl-arginine to form peptidyl-citrulline on a histone protein.","definition_xrefs":["PMID:23175390","PMID:22853951","GOC:als"],"gene_count":0,"genotype_count":0,"name":"obsolete histone citrullination (obsolete GO:0036414)","synonyms":[{"name":"histone deimination","type":"exact"}],"termid":"GO:0036414"}


id: GO:0031624
data:
  {"annotated_genes":["SJAG_01533","SJAG_00033","SJAG_00435"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73228,73394,76444],"is_not":false,"summary":null,"term":"GO:0031624"}]},"cv_name":"molecular_function","definition":"Binding to a ubiquitin conjugating enzyme, any of the E2 proteins.","definition_xrefs":["GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme binding","termid":"GO:0044390"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00435":null,"SJAG_01533":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"ubiquitin conjugating enzyme binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031624","terms_by_termid":{"GO:0031624":null}}


id: PBO:0063024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 4","termid":"PBO:0063024"}


id: PBO:0063741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 6","termid":"PBO:0063741"}


id: PBO:0017693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic septin Spn5","termid":"PBO:0017693"}


id: GO:0021580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the medulla oblongata. This process pertains to the initial formation of a structure from unspecified parts. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GOC:jid","ISBN:0838580343","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"hindbrain formation","termid":"GO:0021576"},{"relation_name":"part_of","term_name":"medulla oblongata morphogenesis","termid":"GO:0021579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata formation","synonyms":[{"name":"medulla biosynthesis","type":"related"},{"name":"medulla formation","type":"related"},{"name":"myelencephalon biosynthesis","type":"related"},{"name":"myelencephalon formation","type":"related"}],"termid":"GO:0021580"}


id: GO:0019303
data:
  {"annotated_genes":["SJAG_03174"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100449],"is_not":false,"summary":null,"term":"GO:0019303"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-ribose (ribo-pentose).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-ribose metabolic process","termid":"GO:0006014"},{"relation_name":"is_a","term_name":"pentose catabolic process","termid":"GO:0019323"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-ribose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RIBOKIN-PWY"],"synonyms":[{"name":"D-ribose breakdown","type":"exact"},{"name":"D-ribose catabolism","type":"exact"},{"name":"D-ribose degradation","type":"exact"}],"termid":"GO:0019303","terms_by_termid":{"GO:0019303":null}}


id: PBO:0034640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_chromosome_condensation_during_telophase","termid":"PBO:0034640"}


id: FYPO:0002500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein palmitoylation is normal (i.e. indistinguishable from wild type). Protein palmitoylation is the addition of a palmitoyl group to a protein amino acid.","definition_xrefs":["GO:0018345","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein palmitoylation","synonyms":[{"name":"normal protein/peptide palmitoylation","type":"exact"}],"termid":"FYPO:0002500"}


id: PBO:0040377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit F6","termid":"PBO:0040377"}


id: CHEBI:26948
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine","termid":"CHEBI:26948"}


id: GO:0034573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: didemethylisoproturon + H2O = carbamic acid + 4-isopropylaniline.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete didemethylisoproturon amidohydrolase activity (obsolete GO:0034573)","termid":"GO:0034573"}


id: GO:0051124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a synapse at a neuromuscular junction.","definition_xrefs":["PMID:20215342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse assembly","termid":"GO:0007416"},{"relation_name":"is_a","term_name":"neuromuscular junction development","termid":"GO:0007528"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"synaptic assembly at neuromuscular junction","synonyms":[{"name":"cholinergic synaptogenesis","type":"related"},{"name":"synaptic growth at neuromuscular junction","type":"related"}],"termid":"GO:0051124"}


id: PBO:0044513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYYR1 antisense RNA 1","termid":"PBO:0044513"}


id: GO:2001076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metanephric ureteric bud development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of metanephric ureteric bud development","termid":"GO:2001074"},{"relation_name":"positively_regulates","term_name":"metanephric part of ureteric bud development","termid":"GO:0035502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric ureteric bud development","termid":"GO:2001076"}


id: PBO:0108561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mmi1 and Mei2-associated RNA","termid":"PBO:0108561"}


id: PBO:0057521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 639","termid":"PBO:0057521"}


id: FYPO:0006045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid biorientation begins later than normal.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid biorientation","termid":"FYPO:0000326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0000631","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of mitotic sister chromatid biorientation","synonyms":[{"name":"delayed mitotic sister chromatid biorientation","type":"exact"},{"name":"delayed onset of mitotic sister chromatid biorientation during vegetative growth","type":"exact"},{"name":"delayed onset of sister chromatid biorientation during mitotic cell cycle","type":"related"},{"name":"mitotic sister chromatid biorientation delayed","type":"exact"}],"termid":"FYPO:0006045"}


id: MOD:00508
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:140","PubMed:14588022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISD a-series (C-Term)","synonyms":[{"name":"ISD a-series (C-Term)","type":"related"},{"name":"a-type-ion","type":"related"}],"termid":"MOD:00508"}


id: GO:1904995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte adhesion to vascular endothelial cell.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GO_REF:0000058","PMID:23897866","GOC:bc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte cell-cell adhesion","termid":"GO:1903038"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"negatively_regulates","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of leukocyte adhesion to vascular endothelial cell","synonyms":[{"name":"down regulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"down-regulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"downregulation of leukocyte adhesion to vascular endothelial cell","type":"exact"},{"name":"inhibition of leukocyte adhesion to vascular endothelial cell","type":"narrow"}],"termid":"GO:1904995"}


id: SO:0000975
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene found within a minicircle.","direct_ancestors":[{"relation_name":"is_a","term_name":"kinetoplast_gene","termid":"SO:0000089"},{"relation_name":"part_of","term_name":"minicircle","termid":"SO:0000980"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minicircle_gene","synonyms":[{"name":"minicircle gene","type":"exact"}],"termid":"SO:0000975"}


id: PBO:0084777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein required to initiate mitophagy; recruits the autophagy adaptor protein Atg11p and the ubiquitin-like protein Atg8p to the mitochondrial surface to initiate mitophagy, the selective vacuolar degradation of mitochondria in response to starvation; can promote pexophagy when placed ectopically in the peroxisomal membrane; regulates mitophagy and ethanol production during alcoholic fermentation","termid":"PBO:0084777"}


id: GO:0045785
data:
  {"annotated_genes":["SJAG_01253","SJAG_02380","SJAG_00910","SJAG_03484","SJAG_04191","SJAG_03802"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104723],"is_not":false,"summary":null,"term":"GO:0045785"},{"annotations":[101976,104724,112235,107462,104847,110177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell adhesion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cell adhesion","termid":"GO:0007155"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00910":null,"SJAG_01253":null,"SJAG_02380":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell adhesion","type":"narrow"},{"name":"stimulation of cell adhesion","type":"narrow"},{"name":"up regulation of cell adhesion","type":"exact"},{"name":"up-regulation of cell adhesion","type":"exact"},{"name":"upregulation of cell adhesion","type":"exact"}],"termid":"GO:0045785","terms_by_termid":{"GO:0045785":null,"GO:1900735":null}}


id: PBO:0031355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_lovastatin","termid":"PBO:0031355"}


id: GO:0018478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxopropanoate + CoA + NAD(P)+ = acetyl-CoA + CO2 + NAD(P)H.","definition_xrefs":["EC:1.2.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"malonate-semialdehyde dehydrogenase (acetylating) activity","secondary_identifiers":["MetaCyc:RXN-9958"],"synonyms":[{"name":"3-oxopropanoate:NAD(P)+ oxidoreductase (decarboxylating, CoA-acetylating)","type":"related"},{"name":"malonic semialdehyde oxidative decarboxylase activity","type":"exact"}],"termid":"GO:0018478"}


id: PBO:0034448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0034448"}


id: GO:0045454
data:
  {"annotated_genes":["SJAG_04399","SJAG_03166","SJAG_00614","SJAG_04953","SJAG_00668","SJAG_04632","SJAG_02515","SJAG_01216","SJAG_01162","SJAG_03653","SJAG_01199","SJAG_03623"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78224,85522,96096,96253,98963,101118,101299,102456,104921,106182,112818,113443],"is_not":false,"summary":null,"term":"GO:0045454"}]},"cv_name":"biological_process","definition":"Any process that maintains the redox environment of a cell or compartment within a cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00614":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_03166":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04632":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell redox homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030503","GO:0045867","GO:0045868","Wikipedia:Redox"],"synonyms":[{"name":"regulation of cell redox homeostasis","type":"related"},{"name":"regulation of redox homeostasis","type":"broad"}],"termid":"GO:0045454","terms_by_termid":{"GO:0045454":null}}


id: PBO:0079096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 9-1","termid":"PBO:0079096"}


id: GO:0098563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic vesicle membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of synaptic vesicle membrane (obsolete GO:0098563)","termid":"GO:0098563"}


id: GO:0006767
data:
  {"annotated_genes":["SJAG_05200","SJAG_00815","SJAG_03275","SJAG_00707","SJAG_02421","SJAG_02225","SJAG_00491","SJAG_04845","SJAG_00827","SJAG_04711","SJAG_01970","SJAG_01543","SJAG_02360","SJAG_00381","SJAG_03632","SJAG_02491","SJAG_03679","SJAG_00106","SJAG_04866","SJAG_02408","SJAG_01198","SJAG_00691","SJAG_04481","SJAG_04067","SJAG_00252","SJAG_03362","SJAG_01126","SJAG_01139","SJAG_00480","SJAG_01935","SJAG_01425","SJAG_02406","SJAG_03538","SJAG_00283","SJAG_02047","SJAG_00043","SJAG_01383","SJAG_01054","SJAG_02420","SJAG_05230","SJAG_00673","SJAG_01881","SJAG_04282","SJAG_04156","SJAG_00376","SJAG_01742"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[113132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[75135,110192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[100871,101019,109774,86417,108507,104438,102162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[110150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046655"},{"annotations":[96710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006769"},{"annotations":[94839,94835,98852,109467,85020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[109779,85162],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[95786,111777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[96971,110483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[63430,91601,83859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[83860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042818"},{"annotations":[83861,91602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[88914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008614"},{"annotations":[103067,110864,102871,97245,83606,106466,111811,113248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"},{"annotations":[109685,103470,110103,95620,112109,109691,90395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[109686,112110,90396,95621,110104,109692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[65402,58762,95622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[106540,95623,106539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"},{"annotations":[96972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"},{"annotations":[95121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042816"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of a diverse group of vitamins that are soluble in water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin metabolic 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vitamin metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"water-soluble vitamin metabolism","type":"exact"}],"termid":"GO:0006767","terms_by_termid":{"GO:0006769":null,"GO:0006772":null,"GO:0008614":null,"GO:0008615":null,"GO:0009102":null,"GO:0009228":null,"GO:0009229":null,"GO:0009231":null,"GO:0009443":null,"GO:0010144":null,"GO:0015940":null,"GO:0036001":null,"GO:0036172":null,"GO:0042816":null,"GO:0042818":null,"GO:0042820":null,"GO:0042821":null,"GO:0042823":null,"GO:0046655":null,"GO:0046656":null,"GO:0090180":null,"GO:1990181":null}}


id: PBO:0058606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6738","termid":"PBO:0058606"}


id: GO:1901467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ferulate catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of ferulate catabolic process","termid":"GO:1901466"},{"relation_name":"negatively_regulates","term_name":"ferulate catabolic process","termid":"GO:1901067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ferulate catabolic process","synonyms":[{"name":"down regulation of ferulate breakdown","type":"exact"},{"name":"down regulation of ferulate catabolic process","type":"exact"},{"name":"down regulation of ferulate catabolism","type":"exact"},{"name":"down regulation of ferulate degradation","type":"exact"},{"name":"down-regulation of ferulate breakdown","type":"exact"},{"name":"down-regulation of ferulate catabolic process","type":"exact"},{"name":"down-regulation of ferulate catabolism","type":"exact"},{"name":"down-regulation of ferulate degradation","type":"exact"},{"name":"downregulation of ferulate breakdown","type":"exact"},{"name":"downregulation of ferulate catabolic process","type":"exact"},{"name":"downregulation of ferulate catabolism","type":"exact"},{"name":"downregulation of ferulate degradation","type":"exact"},{"name":"inhibition of ferulate breakdown","type":"exact"},{"name":"inhibition of ferulate catabolic process","type":"narrow"},{"name":"inhibition of ferulate catabolism","type":"exact"},{"name":"inhibition of ferulate degradation","type":"exact"},{"name":"negative regulation of ferulate breakdown","type":"exact"},{"name":"negative regulation of ferulate catabolism","type":"exact"},{"name":"negative regulation of ferulate degradation","type":"exact"}],"termid":"GO:1901467"}


id: GO:0140908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 122) = CoA + histone H3 N6-acetyl-L-lysine (position 122).","definition_xrefs":["PMID:23415232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0140096","GO:0034212","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"histone H3K122 acetyltransferase activity","synonyms":[{"name":"histone H3-K122 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K122 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K122 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K122 specific)","type":"exact"}],"termid":"GO:0140908"}


id: PBO:0039171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 3","termid":"PBO:0039171"}


id: GO:0036048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a succinyl group (CO-CH2-CH2-CO) from a residue in a peptide or protein.","definition_xrefs":["GOC:sp","PMID:22076378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein desuccinylation","termid":"GO:0036048"}


id: GO:0099541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from post to pre-synapse, across the synaptic cleft, mediated by a lipid.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by lipid","termid":"GO:0099541"}


id: GO:0032482
data:
  {"annotated_genes":["SJAG_03488","SJAG_04329"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112592,68966],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032483"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Rab subfamily relays a signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03488":null,"SJAG_04329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Rab protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032482","terms_by_termid":{"GO:0032483":null}}


id: PBO:0070980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 4","termid":"PBO:0070980"}


id: _global:increased_in_presence_of
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a substance, where the modification is present to a greater extent in the presence than in the absence of the substance.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_in_presence_of","termid":"_global:increased_in_presence_of"}


id: GO:0102677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + campesterol + O2 + NADPH = (22S)-22-hydroxycampesterol + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete campesterol,NADPH:oxygen oxidoreductase activity (obsolete GO:0102677)","termid":"GO:0102677"}


id: PBO:0087341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specific translational activator for the mitochondrial COX1 mRNA; loosely associated with the matrix face of the mitochondrial inner membrane; localizes to vacuole membrane in response to H2O2; influences both COX1 mRNA translation and Cox1p assembly into cytochrome c oxidase; binds to heme B, which may be a mechanism for sensing oxygen levels in order to regulate cytochrome c oxidase biogenesis","termid":"PBO:0087341"}


id: PBO:0036236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberin, GTPase activator Tsc2","termid":"PBO:0036236"}


id: GO:0016453
data:
  {"annotated_genes":["SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003985"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acetyl group to a carbon atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"},{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"C-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016453","terms_by_termid":{"GO:0003985":null}}


id: FYPO:0006013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the ascus is larger than normal.","definition_xrefs":["PomBase:mah","PMID:28410370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascus morphology","termid":"FYPO:0005156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005156"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005156"],"is_obsolete":false,"name":"large ascus","synonyms":[{"name":"enlarged ascus","type":"exact"},{"name":"increased ascus size","type":"exact"},{"name":"large asci","type":"exact"}],"termid":"FYPO:0006013"}


id: PBO:0057023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 124-1","termid":"PBO:0057023"}


id: PBO:0049247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRPEL2 pseudogene 1","termid":"PBO:0049247"}


id: PBO:0047912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(9)(q22.1)","termid":"PBO:0047912"}


id: GO:0036223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of adenine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to adenine starvation","synonyms":[{"name":"cellular response to adenine deprivation","type":"exact"}],"termid":"GO:0036223"}


id: PBO:0078729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 4-1","termid":"PBO:0078729"}


id: GO:0021654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a rhombomere boundary. This process pertains to the initial formation of a boundary delimiting a rhombomere. Rhombomeres are transverse segments of the developing rhombencephalon that are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"rhombomere formation","termid":"GO:0021594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere boundary formation","termid":"GO:0021654"}


id: GO:0061347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the outflow tract.","definition_xrefs":["GOC:dph","GOC:mtg_heart","PMID:19056682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"planar cell polarity pathway involved in heart morphogenesis","termid":"GO:0061346"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"planar cell polarity pathway involved in outflow tract morphogenesis","termid":"GO:0061347"}


id: GO:0001907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a symbiont that results in the death of a cell in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:11123917","PMID:26633512","GOC:add","PMID:22992735","PMID:23230295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"killing of cells of another organism","termid":"GO:0031640"},{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated killing of host cell","synonyms":[{"name":"killing by symbiont of host cells","type":"exact"},{"name":"pathogenesis","type":"related"}],"termid":"GO:0001907"}


id: PBO:0077940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 1-1","termid":"PBO:0077940"}


id: PBO:0078641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase RNA component interacting RNase","termid":"PBO:0078641"}


id: GO:0016176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of the enzyme superoxide-generating NADPH oxidase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"superoxide-generating NADPH oxidase activator activity","synonyms":[{"name":"neutrophil cytosol factor 2","type":"narrow"}],"termid":"GO:0016176"}


id: PBO:0046964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member B","termid":"PBO:0046964"}


id: PBO:0085785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unassigned function; involved in activation of the Pma1p plasma membrane H+-ATPase by glucose; contains peptide signal for membrane localization","termid":"PBO:0085785"}


id: MOD:00889
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-prolinium (charged L-proline) residue to N,N-dimethyl-L-proline.","definition_xrefs":["Unimod:36#P"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-proline (L-prolinium) residue","termid":"MOD:00888"},{"relation_name":"is_a","term_name":"N,N-dimethyl-L-proline","termid":"MOD:00075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-proline (from L-prolinium)","termid":"MOD:00889"}


id: PBO:0042012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 69","termid":"PBO:0042012"}


id: PBO:0044641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping enzyme, scavenger","termid":"PBO:0044641"}


id: GO:0033158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the vectorial transfer of a protein from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein import into nucleus, translocation (obsolete GO:0033158)","synonyms":[{"name":"regulation of protein import into cell nucleus, translocation","type":"exact"}],"termid":"GO:0033158"}


id: PBO:0086830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YPL039W is not an essential gene","termid":"PBO:0086830"}


id: PBO:0111931
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP3/PP2B/calcineurin subfamily","termid":"PBO:0111931"}


id: PBO:0076985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 3","termid":"PBO:0076985"}


id: PBO:0068613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 64, pseudogene","termid":"PBO:0068613"}


id: GO:1990638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte colony-stimulating factor stimulus.","definition_xrefs":["PMID:9488469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to granulocyte colony-stimulating factor","synonyms":[{"name":"response to G-CSF","type":"exact"}],"termid":"GO:1990638"}


id: PBO:0071284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 7","termid":"PBO:0071284"}


id: PBO:0074815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 15B","termid":"PBO:0074815"}


id: GO:1900906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hexadecanal metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of hexadecanal metabolic process","termid":"GO:1900905"},{"relation_name":"negatively_regulates","term_name":"hexadecanal metabolic process","termid":"GO:0046458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hexadecanal metabolic process","synonyms":[{"name":"down regulation of hexadecanal metabolic process","type":"exact"},{"name":"down regulation of hexadecanal metabolism","type":"related"},{"name":"down-regulation of hexadecanal metabolic process","type":"exact"},{"name":"down-regulation of hexadecanal metabolism","type":"related"},{"name":"downregulation of hexadecanal metabolic process","type":"exact"},{"name":"downregulation of hexadecanal metabolism","type":"related"},{"name":"inhibition of hexadecanal metabolic process","type":"narrow"},{"name":"inhibition of hexadecanal metabolism","type":"related"},{"name":"negative regulation of hexadecanal metabolism","type":"related"}],"termid":"GO:1900906"}


id: FYPO:0006890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of heme export from the vacuole to the cytoplasm is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vacuolar transport","termid":"FYPO:0000598"},{"relation_name":"is_a","term_name":"abnormal nuclear import","termid":"FYPO:0001217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased heme export from vacuole","synonyms":[{"name":"decreased heme export from vacuole during mitotic cell cycle","type":"related"},{"name":"decreased heme export from vacuole during vegetative growth","type":"exact"},{"name":"heme export from vacuole to cytoplasm","type":"exact"},{"name":"reduced heme export from vacuole","type":"exact"}],"termid":"FYPO:0006890"}


id: FYPO:0006599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during vegetative growth","termid":"FYPO:0000450"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to centromeric chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to centromeric chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006599"}


id: PBO:0061809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 1 candidate 1 (pseudogene)","termid":"PBO:0061809"}


id: GO:0007480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a leg derived from an imaginal disc are generated and organized. A leg is a limb on which an animal walks and stands. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"},{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"part_of","term_name":"leg disc morphogenesis","termid":"GO:0007478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived leg morphogenesis","termid":"GO:0007480"}


id: PBO:0045841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 31","termid":"PBO:0045841"}


id: PBO:0029843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_acetylation","termid":"PBO:0029843"}


id: FYPO:0001488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to protamine sulfate. A protamine is any of a group of simple proteins that yield basic amino acids on hydrolysis, and forms a complex with heparin. Cells stop growing (and may die) at a concentration of protamine sulfate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to protamine sulfate","synonyms":[{"name":"hypersensitive to protamine sulfate","type":"exact"},{"name":"sensitive to protamine sulfate during mitotic cell cycle","type":"related"},{"name":"sensitive to protamine sulfate during vegetative growth","type":"exact"},{"name":"sensitive to protamine sulphate","type":"exact"}],"termid":"FYPO:0001488"}


id: PR:Q10192
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L18-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.07","secondary_identifiers":["UniProtKB:Q10192"],"synonyms":[{"name":"Spom972h-RPL18","type":"exact"}],"termid":"PR:Q10192"}


id: GO:0071039
data:
  {"annotated_genes":["SJAG_01830","SJAG_03745","SJAG_04360","SJAG_03939","SJAG_01064","SJAG_00701","SJAG_03984","SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88342,95870,99087,107950,108847,109360,111456,114175],"is_not":false,"summary":null,"term":"GO:0071039"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a cryptic unstable transcript (CUT), initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target CUT.","definition_xrefs":["PMID:16973436","GOC:dgf","PMID:15935759","PMID:18007593","PMID:18591258","GOC:krc","PMID:16973437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"},{"relation_name":"is_a","term_name":"CUT catabolic process","termid":"GO:0071034"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00701":null,"SJAG_01064":null,"SJAG_01830":null,"SJAG_02622":null,"SJAG_03745":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent CUT catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent CUT catabolic process","type":"related"}],"termid":"GO:0071039","terms_by_termid":{"GO:0071039":null}}


id: PBO:0014292
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Casein KInase","termid":"PBO:0014292"}


id: GO:0008103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment and maintenance of a specific axis of polarity of the oocyte microtubule network. The axis is set so that the minus and plus ends of the microtubules of the mid stage oocyte are positioned along the anterior cortex and at the posterior pole, respectively. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11807042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"part_of","term_name":"oocyte axis specification","termid":"GO:0007309"},{"relation_name":"part_of","term_name":"oocyte microtubule cytoskeleton organization","termid":"GO:0016325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007163","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"oocyte microtubule cytoskeleton polarization","secondary_identifiers":["GO:0048129"],"termid":"GO:0008103"}


id: PBO:0075153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 9","termid":"PBO:0075153"}


id: PBO:0041332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3","termid":"PBO:0041332"}


id: PBO:0039030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 6","termid":"PBO:0039030"}


id: MOD:01787
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-tyrosine residues through their 5' positions by amine nitrogen to form 5'-(L-tyros-5'-yl)amino-L-tyrosine.","definition_xrefs":["RESID:AA0459","PubMed:18781570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-(L-tyros-5'-yl)amino-L-tyrosine","synonyms":[{"name":"(2S,2'S)-3,3'-[iminobis(4-hydroxybenzene-3,1-diyl)]bis(2-aminopropanoic acid)","type":"exact"},{"name":"5'-(L-tyros-5'-yl)amino-L-tyrosine","type":"exact"},{"name":"5'-[(tyros-5'-yl)amino]tyrosine","type":"exact"},{"name":"5'-tyrosyl-5'-aminotyrosine","type":"exact"},{"name":"CROSSLNK 5'-tyrosyl-5'-aminotyrosine (Tyr-Tyr) (interchain)","type":"exact"},{"name":"bis(LTQ) linkage","type":"exact"}],"termid":"MOD:01787"}


id: GO:0016694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial catalase-peroxidase activity (obsolete GO:0016694)","synonyms":[{"name":"bacterial catalase-peroxidase activity","type":"exact"}],"termid":"GO:0016694"}


id: PBO:0004325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA hairpin binding protein (predicted)","termid":"PBO:0004325"}


id: GO:0035433
data:
  {"annotated_genes":["SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66911],"is_not":false,"summary":null,"term":"GO:0035433"},{"annotations":[94801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006847"}]},"cv_name":"biological_process","definition":"The process in which acetate is transported across a membrane. Acetate is the 2-carbon carboxylic acid ethanoic acid.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate transport","termid":"GO:0006846"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"acetate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"acetate membrane transport","type":"exact"}],"termid":"GO:0035433","terms_by_termid":{"GO:0006847":null,"GO:0035433":null}}


id: PBO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L24 (predicted)","termid":"PBO:0001973"}


id: PBO:0014241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter regulator (predicted)","termid":"PBO:0014241"}


id: PBO:0081218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MIZ-type containing 2","termid":"PBO:0081218"}


id: PBO:0083332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF YER152C","termid":"PBO:0083332"}


id: PBO:0091060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA(Ile)-lysidine synthetase Til1","termid":"PBO:0091060"}


id: PATO:0001260
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light purple","termid":"PATO:0001260"}


id: PBO:0003744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VII Cox7 (predicted)","termid":"PBO:0003744"}


id: GO:0018924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"mandelate metabolic process","secondary_identifiers":["UM-BBD_pathwayID:mca"],"synonyms":[{"name":"mandelate metabolism","type":"exact"},{"name":"mandelic acid metabolic process","type":"exact"},{"name":"mandelic acid metabolism","type":"exact"}],"termid":"GO:0018924"}


id: PBO:0090125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase (predicted)","termid":"PBO:0090125"}


id: PR:Q10082
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.03c","synonyms":[{"name":"Spom972h-SPAC11D3.03c","type":"exact"}],"termid":"PR:Q10082"}


id: SO:0000541
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one VDJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"VDJ_gene_segment","termid":"SO:0000574"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDJ_C_cluster","synonyms":[{"name":"(VDJ)-C-CLUSTER","type":"exact"},{"name":"VDJ C cluster","type":"exact"}],"termid":"SO:0000541"}


id: PBO:0067628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 800, pseudogene","termid":"PBO:0067628"}


id: GO:0015952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine deoxyribonucleotide is synthesized from another purine deoxyribonucleotide.","definition_xrefs":["ISBN:0306444747","ISBN:0471394831","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine nucleotide interconversion","termid":"GO:0015950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleotide interconversion","termid":"GO:0015952"}


id: PR:Q9UUI1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01629","PANTHER:PTHR11021:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.17c","secondary_identifiers":["UniProtKB:Q9UUI1"],"synonyms":[{"name":"Spom972h-LSM6","type":"exact"}],"termid":"PR:Q9UUI1"}


id: PBO:0047572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 23","termid":"PBO:0047572"}


id: GO:0035042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Replacement of sperm-specific chromosomal proteins with somatic histones, to allow the paternal genome to acquire a nucleosomal chromatin organization compatible with nuclear activity.","definition_xrefs":["GOC:bf","PMID:11735001"],"gene_count":0,"genotype_count":0,"name":"obsolete fertilization, exchange of chromosomal proteins (obsolete GO:0035042)","synonyms":[{"name":"sperm-specific histone exchange","type":"exact"},{"name":"sperm-specific histone replacement","type":"exact"}],"termid":"GO:0035042"}


id: GO:0097329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antimetabolite stimulus. An antimetabolite is a substance which is structurally similar to a metabolite but which competes with it or replaces it, and so prevents or reduces its normal utilization.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to antimetabolite","termid":"GO:0097329"}


id: PBO:0056668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 6","termid":"PBO:0056668"}


id: GO:1902026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cartilage condensation.","definition_xrefs":["PMID:17202865","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cartilage condensation","termid":"GO:0001502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cartilage condensation","termid":"GO:1902026"}


id: PBO:0017768
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cruciform Cutting Endonuclease","termid":"PBO:0017768"}


id: GO:0039526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a viral gene product affects host apoptosis, leading to a change in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf","PMID:12867651","PMID:15225638","PMID:16037790","UniProtKB-KW:KW-1119","GOC:sp","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation by virus of host apoptosis (obsolete GO:0039526)","synonyms":[{"name":"modulation by virus of host apoptosis","type":"exact"},{"name":"modulation by virus of host apoptotic process","type":"exact"},{"name":"modulation of host cell apoptosis by virus","type":"exact"},{"name":"perturbation by virus of host apoptotic process","type":"exact"},{"name":"regulation by virus of host apoptosis","type":"exact"}],"termid":"GO:0039526"}


id: PBO:0113088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic RNA-binding protein; shuttles between nucleus and cytoplasm and is exported from the nucleus in an mRNA export-dependent manner; associates with translating ribosomes; involved in heme regulation of Hap1p as a component of the HMC complex, also involved in the organization of actin filaments; contains a La motif; role in preventing L-A mycovirus pathogenesis; SRO9 has a paralog, SLF1, that arose from the whole genome duplication","termid":"PBO:0113088"}


id: PBO:0085001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of actin nucleation-promoting factor activity; interacts with Las17p, a homolog of human Wiskott-Aldrich Syndrome protein (WASP), via an N-terminal SH3 domain, and along with LSB1 cooperatively inhibits the nucleation of actin filaments; short-lived protein whose levels increase in response to thermal stress; induces the formation of the [PIN+] and [RNQ+] prions when overproduced; PIN3 has a paralog, LSB1, that arose from the whole genome duplication","termid":"PBO:0085001"}


id: FYPO:0002531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to nucleoplasm","synonyms":[{"name":"abolished protein localisation to nucleoplasm","type":"exact"},{"name":"abolished protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleoplasm during vegetative growth","type":"exact"},{"name":"protein localization to nucleoplasm abolished","type":"exact"}],"termid":"FYPO:0002531"}


id: PBO:0040225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 1 pseudogene 1","termid":"PBO:0040225"}


id: GO:1902117
data:
  {"annotated_genes":["SJAG_01837","SJAG_03048","SJAG_03851","SJAG_02332","SJAG_00718","SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104654,104743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[98478,112768,85771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[107523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of organelle assembly.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"positively_regulates","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_02332":null,"SJAG_03048":null,"SJAG_03851":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of organelle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of organelle assembly","type":"narrow"},{"name":"up regulation of organelle assembly","type":"exact"},{"name":"up-regulation of organelle assembly","type":"exact"},{"name":"upregulation of organelle assembly","type":"exact"}],"termid":"GO:1902117","terms_by_termid":{"GO:0110161":null,"GO:1905561":null,"GO:2000786":null}}


id: PBO:0056842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056842"}


id: PBO:0059176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 2 receptor accessory protein 2","termid":"PBO:0059176"}


id: PBO:0000793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein Mud1","termid":"PBO:0000793"}


id: PBO:0047241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 236 member A","termid":"PBO:0047241"}


id: PBO:0043612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 4","termid":"PBO:0043612"}


id: FYPO:0000404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the duration of progression through the G2/M transition of the mitotic cell cycle is shorter than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased duration of mitotic G2/M phase transition (obsolete FYPO:0000404)","synonyms":[{"name":"cell cycle progression through the G2/M phase transition: increased rate","type":"related"},{"name":"decreased duration of cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"decreased duration of cell cycle progression through mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"increased rate of mitotic G2/M phase transition","type":"related"},{"name":"reduced duration of mitotic G2/M phase transition","type":"exact"}],"termid":"FYPO:0000404"}


id: PBO:0109626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTLV-1 related endogenous sequence (pseudogene)","termid":"PBO:0109626"}


id: FYPO:0007104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome segregation is abnormal along the chromosome arms.","definition_xrefs":["PomBase:mah","PMID:22292001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal homologous chromosome arm segregation","synonyms":[{"name":"abnormal homologous chromosome arm segregation during first meiotic nuclear division","type":"exact"},{"name":"abnormal homologous chromosome arm segregation during meiosis I","type":"exact"},{"name":"abnormal homologous chromosome arm separation","type":"related"}],"termid":"FYPO:0007104"}


id: GO:0098715
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97753],"is_not":false,"summary":null,"term":"GO:0098715"}]},"cv_name":"biological_process","definition":"The directed movement of malonic acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"malonic acid transmembrane transport","termid":"GO:1901553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"malonic acid import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097406"],"synonyms":[{"name":"malonate import into cell","type":"exact"},{"name":"malonic acid import into cell","type":"exact"}],"termid":"GO:0098715","terms_by_termid":{"GO:0098715":null}}


id: GO:2000467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycogen (starch) synthase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of glycogen (starch) synthase activity","termid":"GO:2000465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycogen (starch) synthase activity","synonyms":[{"name":"positive regulation of UDP-glucose-glycogen glucosyltransferase activity","type":"exact"},{"name":"positive regulation of UDP-glucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"positive regulation of UDP-glycogen synthase activity","type":"exact"},{"name":"positive regulation of UDPG-glycogen synthetase activity","type":"exact"},{"name":"positive regulation of UDPG-glycogen transglucosylase activity","type":"exact"},{"name":"positive regulation of UDPglucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"positive regulation of glycogen (starch) synthetase activity","type":"exact"},{"name":"positive regulation of uridine diphosphoglucose-glycogen glucosyltransferase activity","type":"exact"}],"termid":"GO:2000467"}


id: FYPO:0007583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased during telophase of mitosis.","definition_xrefs":["PMID:19736319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cytoplasm","termid":"FYPO:0006099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm during mitotic telophase","synonyms":[{"name":"decreased protein localisation to cytoplasm during mitotic telophase","type":"exact"},{"name":"decreased protein localization to cytoplasm during telophase during vegetative growth","type":"exact"},{"name":"decreased protein localization to cytoplasm during telophase of mitotic cell cycle","type":"exact"},{"name":"reduced protein localization to cytoplasm during mitotic telophase","type":"exact"}],"termid":"FYPO:0007583"}


id: FYPO:0002390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid cohesion is normal (i.e. indistinguishable from wild type). Mitotic sister chromatid cohesion is the process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0007064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic sister chromatid cohesion","synonyms":[{"name":"normal mitotic chromosome cohesion","type":"exact"},{"name":"normal mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"normal sister chromatid cohesion during mitosis","type":"exact"},{"name":"normal sister chromatid cohesion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002390"}


id: FYPO:0008249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more protein-coding genes is decreased.","definition_xrefs":["PMID:25356590","PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at protein coding gene","termid":"FYPO:0008249"}


id: GO:0009176
data:
  {"annotated_genes":["SJAG_04627","SJAG_04487","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104469,85498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[104470,95087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine deoxynucleoside monophosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate metabolic process","termid":"GO:0009129"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009162"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009176","terms_by_termid":{"GO:0006226":null,"GO:0006231":null}}


id: SO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme recognition site that, when cleaved, results in 3 prime overhangs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_sticky_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"three prime sticky end restriction enzyme cleavage site","type":"exact"}],"termid":"SO:0001976"}


id: PBO:0057720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-5","termid":"PBO:0057720"}


id: FYPO:0006951
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of N(alpha),N(alpha)-dimethyl-L-histidines measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular N(alpha),N(alpha)-dimethyl-L-histidine level","synonyms":[{"name":"increased N(alpha),N(alpha)-dimethyl-L-histidine accumulation","type":"related"},{"name":"increased cellular N(alpha),N(alpha)-dimethyl-L-histidine level during mitotic cell cycle","type":"related"},{"name":"increased cellular N(alpha),N(alpha)-dimethyl-L-histidine level during vegetative growth","type":"exact"},{"name":"increased cellular dimethyl-histidine level","type":"exact"},{"name":"increased cellular dimethylhistidine level","type":"exact"}],"termid":"FYPO:0006951"}


id: PBO:0073910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC16A1 pseudogene 1","termid":"PBO:0073910"}


id: PATO:0001093
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001093 relative flux value (obsolete PATO:0001093)","termid":"PATO:0001093"}


id: FYPO:0002468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable, have a larger volume and are longer than normal in the vegetative growth phase of the life cycle. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable swollen elongated vegetative cell population (obsolete FYPO:0002468)","synonyms":[{"name":"inviable elongated cell population with increased cell volume","type":"exact"},{"name":"inviable elongated swollen population","type":"exact"},{"name":"inviable enlarged elongated cell population","type":"related"},{"name":"inviable large elongated cell population","type":"related"},{"name":"inviable swollen long vegetative cell population","type":"exact"}],"termid":"FYPO:0002468"}


id: FYPO:0002196
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115346,115303,115315],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001122"},{"annotations":[115245],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"},{"annotations":[115363,115352,115357,115389],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0002380"},{"annotations":[115196,115189,115190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001877"},{"annotations":[115194,115195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cell shape is altered in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell morphology","termid":"FYPO:0001118"},{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00266":null,"SJAG_00514":null,"SJAG_01794":null,"SJAG_02592":null,"SJAG_02819":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04280":null,"SJAG_04312":null,"SJAG_04332":null,"SJAG_04522":null},"genotype_count":13,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"abnormal vegetative cell shape","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_04332","SJAG_03453","SJAG_02819","SJAG_03581","SJAG_04280","SJAG_03048","SJAG_01794","SJAG_04312","SJAG_00028","SJAG_04522","SJAG_00514","SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","scd1delta","scd2delta","pka1delta","rga4delta","sty1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","atf1delta","rga6delta","ras1delta","efc25delta","gef1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell shape during vegetative growth","type":"exact"},{"name":"abnormal vegetative cell shape during mitotic cell cycle","type":"related"},{"name":"misshapen vegetative cell","type":"related"}],"termid":"FYPO:0002196","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001122":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0049053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 52","termid":"PBO:0049053"}


id: PBO:0054950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2364","termid":"PBO:0054950"}


id: GO:0098017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the viral capsid that comprises the most common capsomere type. For example, in a T=3 icosahedral capsid, which is composed of 12 pentameric and 20 hexameric capsomeres, the hexameric capsomeres are major subunits.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capsomere","termid":"GO:0046727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, major subunit","synonyms":[{"name":"major capsomere","type":"exact"},{"name":"major head protein","type":"related"}],"termid":"GO:0098017"}


id: PBO:0045253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal light intermediate chain 1","termid":"PBO:0045253"}


id: GO:0033131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"regulation of hexokinase activity","termid":"GO:1903299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"regulation of glucokinase activity","synonyms":[{"name":"glucokinase regulator","type":"narrow"}],"termid":"GO:0033131"}


id: GO:0060312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of blood vessel remodeling, the reorganization or renovation of existing blood vessels.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"blood vessel remodeling","termid":"GO:0001974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood vessel remodeling","synonyms":[{"name":"regulation of blood vessel remodelling","type":"exact"}],"termid":"GO:0060312"}


id: PBO:0043976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSAG family member 2","termid":"PBO:0043976"}


id: FYPO:0005414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the second meiotic nuclear division is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during meiosis","termid":"FYPO:0003611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during meiosis II","synonyms":[{"name":"increased protein accumulation during meiosis II","type":"related"},{"name":"increased protein level during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005414"}


id: GO:0060332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a response to type II interferon (interferon-gamma). Response to interferon gamma is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of response to type II interferon","termid":"GO:0060330"},{"relation_name":"is_a","term_name":"positive regulation of response to cytokine stimulus","termid":"GO:0060760"},{"relation_name":"positively_regulates","term_name":"response to type II interferon","termid":"GO:0034341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to type II interferon","synonyms":[{"name":"positive regulation of response to gamma-interferon","type":"related"},{"name":"positive regulation of response to immune interferon","type":"exact"},{"name":"positive regulation of response to interferon-gamma","type":"exact"},{"name":"positive regulation of response to type II IFN","type":"broad"}],"termid":"GO:0060332"}


id: PBO:0089755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase","termid":"PBO:0089755"}


id: GO:0032958
data:
  {"annotated_genes":["SJAG_03409","SJAG_01148","SJAG_02321","SJAG_00244","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89475,94896,111130,113089,114877],"is_not":false,"summary":null,"term":"GO:0032958"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00321":null,"SJAG_01148":null,"SJAG_02321":null,"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"inositol phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inositol phosphate anabolism","type":"exact"},{"name":"inositol phosphate biosynthesis","type":"exact"},{"name":"inositol phosphate formation","type":"exact"},{"name":"inositol phosphate synthesis","type":"exact"},{"name":"myo-inositol phosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032958","terms_by_termid":{"GO:0032958":null}}


id: FYPO:0004163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable when cells the population are subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"increased viability upon glucose starvation","synonyms":[{"name":"increased cell population viability upon glucose starvation","type":"exact"},{"name":"increased viability during glucose starvation","type":"exact"},{"name":"increased viability upon glucose depletion","type":"exact"},{"name":"increased viability upon glucose deprivation","type":"exact"},{"name":"increased viability upon glucose limitation","type":"related"}],"termid":"FYPO:0004163"}


id: PBO:0071828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 23","termid":"PBO:0071828"}


id: GO:0072421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about damage to DNA is received and converted into a molecular signal, contributing to a DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of DNA damage stimulus involved in DNA damage checkpoint (obsolete GO:0072421)","synonyms":[{"name":"DNA damage checkpoint sensor mechanism","type":"related"},{"name":"DNA damage checkpoint sensor process","type":"related"},{"name":"sensing involved in DNA damage checkpoint","type":"related"}],"termid":"GO:0072421"}


id: GO:0044067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or temporarily subverts the host intercellular junction. Intercellular junction include tight junctions and adherens junctions.","definition_xrefs":["PMID:16102958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell-cell junction","synonyms":[{"name":"disruption of host cell-cell junction","type":"broad"},{"name":"modification by symbiont of host cell-cell junction","type":"exact"},{"name":"modification by symbiont of host intercellular junctions","type":"exact"},{"name":"modification of host cell-cell junction","type":"related"},{"name":"modification of host intercellular junctions by symbiont","type":"exact"},{"name":"symbiont-mediated disruption of host cell-cell junction","type":"related"}],"termid":"GO:0044067"}


id: PBO:0042393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member g","termid":"PBO:0042393"}


id: GO:0010620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA-dependent transcription using a mechanism that involves the catabolism of a sequence-specific DNA-binding transcription factor by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["GOC:bf","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0030163","GO:0006355"],"is_obsolete":false,"name":"negative regulation of transcription by transcription factor catabolism","termid":"GO:0010620"}


id: GO:0008127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + O2 + quercetin = 2-(3,4-dihydroxybenzoyloxy)-4,6-dihydroxybenzoate + CO.","definition_xrefs":["EC:1.13.11.24","RHEA:15381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"quercetin 2,3-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0891","Reactome:R-HSA-8953398","MetaCyc:QUERCETIN-23-DIOXYGENASE-RXN","KEGG_REACTION:R02156"],"synonyms":[{"name":"flavonol 2,4-oxygenase activity","type":"related"},{"name":"quercetin:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"quercetinase activity","type":"related"}],"termid":"GO:0008127"}


id: PBO:0088859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3-containing 90S preribosome complex subunit Cms1","termid":"PBO:0088859"}


id: GO:0045194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of oxidized low-density lipoproteins.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidized low-density lipoprotein catabolic process (obsolete GO:0045194)","synonyms":[{"name":"Ox-LDL catabolic process","type":"exact"},{"name":"Ox-LDL catabolism","type":"exact"},{"name":"oxidized low-density lipoprotein breakdown","type":"exact"},{"name":"oxidized low-density lipoprotein catabolic process","type":"exact"},{"name":"oxidized low-density lipoprotein catabolism","type":"exact"},{"name":"oxidized low-density lipoprotein degradation","type":"exact"}],"termid":"GO:0045194"}


id: GO:0008068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a channel that opens when glutamate is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellularly glutamate-gated ion channel activity","termid":"GO:0005234"},{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"extracellularly glutamate-gated chloride channel activity","synonyms":[{"name":"extracellular-glutamate-gated chloride channel activity","type":"exact"}],"termid":"GO:0008068"}


id: PBO:0081039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 15","termid":"PBO:0081039"}


id: PBO:0041515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15 open reading frame 40","termid":"PBO:0041515"}


id: PATO:0000236
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000236 odor type (obsolete PATO:0000236)","termid":"PATO:0000236"}


id: PBO:0017689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase Aco1 (predicted)","termid":"PBO:0017689"}


id: PBO:0044388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily AC member 1, pseudogene","termid":"PBO:0044388"}


id: GO:0050269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coniferyl aldehyde + H2O + NAD(P)+ = ferulate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"coniferyl-aldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-1241"],"synonyms":[{"name":"coniferyl aldehyde:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0050269"}


id: PBO:0073634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 20, pseudogene","termid":"PBO:0073634"}


id: PATO:0001165
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001165 urine enzyme composition value (obsolete PATO:0001165)","termid":"PATO:0001165"}


id: FYPO:0007413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the telomere is abnormal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology","termid":"FYPO:0006508"},{"relation_name":"output_of","term_name":"abnormal telomere maintenance during G0","termid":"FYPO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0000293"],"is_obsolete":false,"name":"abnormal telomere morphology during G0","synonyms":[{"name":"abnormal chromosome morphology at telomere during G0","type":"exact"},{"name":"abnormal chromosome morphology at telomeric region during G0","type":"exact"},{"name":"abnormal telomere morphology during cell quiescence","type":"exact"},{"name":"abnormal telomere morphology during quiescence","type":"exact"},{"name":"abnormal telomeric region morphology during G0","type":"exact"}],"termid":"FYPO:0007413"}


id: FYPO:0004173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to heat","synonyms":[{"name":"decreased protein phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to heat stress","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0004173"}


id: GO:1905120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a haloperidol stimulus.","definition_xrefs":["GOC:TermGenie","GOC:dw","GO_REF:0000071","PMID:24751813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to haloperidol","termid":"GO:1905119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to haloperidol","termid":"GO:1905120"}


id: PBO:0084683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial cardiolipin-specific phospholipase; functions upstream of Taz1p to generate monolyso-cardiolipin; transcription increases upon genotoxic stress; involved in restricting Ty1 transposition; has homology to mammalian CGI-58","termid":"PBO:0084683"}


id: PBO:0054719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2128","termid":"PBO:0054719"}


id: PBO:0070249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 192 pseudogene","termid":"PBO:0070249"}


id: PBO:0029087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_(guanine(9)-N(1))-methyltransferase_activity","termid":"PBO:0029087"}


id: PBO:0050811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUS1 checkpoint clamp component B","termid":"PBO:0050811"}


id: GO:0002570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of variable numbers of random nucleotides by terminal deoxytransferase in the N regions of heavy chain immunoglobulin genes. N regions are found at the V-D and D-J recombinational junctions.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors by N region addition","termid":"GO:0002569"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"},{"relation_name":"part_of","term_name":"somatic recombination of immunoglobulin gene segments","termid":"GO:0016447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"somatic diversification of immunoglobulin genes by N region addition","synonyms":[{"name":"somatic diversification of antibody genes by N region addition","type":"exact"}],"termid":"GO:0002570"}


id: GO:0070061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the D- or L-enantiomer of fructose, the ketohexose arabino-hex-2-ulose.","definition_xrefs":["GOC:mah","CHEBI:28757","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"fructose binding","termid":"GO:0070061"}


id: GO:0001060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of RNA from a DNA template by RNA polymerase V, originating at a Pol V-specific promoter.","definition_xrefs":["PMID:19110459","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"transcription by RNA polymerase V","synonyms":[{"name":"transcription from RNA pol V promoter","type":"exact"},{"name":"transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:0001060"}


id: PBO:0046367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTPD3 antisense RNA 1","termid":"PBO:0046367"}


id: _global:indirectly_causally_upstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is indirectly causally upstream of q iff p is causally upstream of q and there exists some process r such that p is causally upstream of r and r is causally upstream of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"_global:causally_upstream_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indirectly_causally_upstream_of","secondary_identifiers":["RO:0012011"],"termid":"_global:indirectly_causally_upstream_of"}


id: PR:000050538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe) that has been phosphorylated on a residue equivalent to Ser-527 of the amino acid sequence represented by UniProtKB:Q9P7J8. Example: UniProtKB:Q9P7J8, Ser-527, MOD:00046.","definition_xrefs":["PRO:DAN","PMID:12805221","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe)","termid":"PR:000036914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gad8/Phos(S527)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein kinase gad8 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-gad8/Phos:2","type":"exact"},{"name":"UniProtKB:Q9P7J8, Ser-527, MOD:00046","type":"narrow"},{"name":"gad8/Phos(S527)","type":"exact"}],"termid":"PR:000050538"}


id: PBO:0075976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 2","termid":"PBO:0075976"}


id: PBO:0057970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689c","termid":"PBO:0057970"}


id: GO:0044837
data:
  {"annotated_genes":["SJAG_00279","SJAG_00082","SJAG_04982","SJAG_02592","SJAG_04887","SJAG_02431","SJAG_01805","SJAG_03703","SJAG_02831","SJAG_01732","SJAG_02700","SJAG_01665","SJAG_03379","SJAG_00268","SJAG_04703","SJAG_00228","SJAG_00938","SJAG_00700","SJAG_04597","SJAG_01143","SJAG_04621","SJAG_03596","SJAG_02864","SJAG_04498","SJAG_01894","SJAG_04077","SJAG_03088","SJAG_03025","SJAG_03045","SJAG_03048","SJAG_04930"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101225,106892],"is_not":false,"summary":null,"term":"GO:0044837"},{"annotations":[106891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000915"},{"annotations":[85448,94140,104228,94394],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[94031,114702,91390,93757,98662,94998,113117,115516,88421,97362,88679,84394,88633,93833,107962,108399,114526,113946,98525,94141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[94142],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[94999,98526,108400,93758,94143,96799,91391,84395,113947,97032],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[98470],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[86116,90515],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[115301,89911,90481],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of an actomyosin contractile ring.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"cortical actin cytoskeleton organization","termid":"GO:0030866"},{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02831":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03088":null,"SJAG_03379":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"actomyosin contractile ring organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"cytokinesis, actomyosin contractile ring organization","type":"exact"}],"termid":"GO:0044837","terms_by_termid":{"GO:0000915":null,"GO:0044837":null,"GO:0071520":null,"GO:0120306":null,"GO:1902404":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: GO:0070356
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptotagmin, synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, syntaxin1b, and Rab3a (or orthologs thereof).","definition_xrefs":["PMID:7654227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"synaptotagmin-synaptobrevin 2-SNAP-25-syntaxin-1a-syntaxin-1b-Rab3a complex","synonyms":[{"name":"SNARE complex (STX1a, STX1b, SNAP25, RAB3a, SYT1, VAMP2)","type":"narrow"},{"name":"STX1a-STX1b-SNAP25-RAB3a-SYT1-VAMP2 complex","type":"narrow"}],"termid":"GO:0070356"}


id: PBO:0071124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 126","termid":"PBO:0071124"}


id: GO:0021825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where neuronal precursors migrate tangentially in the cerebral cortex, primarily guided through physical cell-cell interactions.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cell migration","termid":"GO:0006929"},{"relation_name":"is_a","term_name":"cerebral cortex tangential migration","termid":"GO:0021800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cerebral cortex tangential migration","termid":"GO:0021825"}


id: PBO:0086736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; open reading frame overlaps LSM8/YJR022W encoding an essential snRNP protein required for RNA processing and splicing","termid":"PBO:0086736"}


id: GO:1905170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to phagocytic vesicle.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to phagocytic vesicle","termid":"GO:1905169"},{"relation_name":"negatively_regulates","term_name":"protein localization to phagocytic vesicle","termid":"GO:1905161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to phagocytic vesicle","synonyms":[{"name":"down regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"down regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"down regulation of protein localisation to phagosome","type":"exact"},{"name":"down regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"down regulation of protein localization to phagocytic vesicle","type":"exact"},{"name":"down regulation of protein recruitment to phagosome","type":"exact"},{"name":"down-regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein localisation to phagosome","type":"exact"},{"name":"down-regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein localization to phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein recruitment to phagosome","type":"exact"},{"name":"downregulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"downregulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"downregulation of protein localisation to phagosome","type":"exact"},{"name":"downregulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"downregulation of protein localization to phagocytic vesicle","type":"exact"},{"name":"downregulation of protein recruitment to phagosome","type":"exact"},{"name":"inhibition of protein localisation in phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein localisation to phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein localisation to phagosome","type":"narrow"},{"name":"inhibition of protein localization in phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein localization to phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein recruitment to phagosome","type":"narrow"},{"name":"negative regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein localisation to phagosome","type":"exact"},{"name":"negative regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein recruitment to phagosome","type":"exact"}],"termid":"GO:1905170"}


id: FYPO:0000532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic cell cycle arrest in response to pheromone is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest in response to pheromone","termid":"FYPO:0000530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic cell cycle arrest in response to pheromone","synonyms":[{"name":"decreased pheromone-induced mitotic cell cycle arrest","type":"exact"},{"name":"pheromone-induced cell cycle arrest: decreased","type":"related"},{"name":"reduced mitotic cell cycle arrest in response to pheromone","type":"exact"}],"termid":"FYPO:0000532"}


id: GO:0006379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cleavage (obsolete GO:0006379)","synonyms":[{"name":"cleavage stimulation factor activity","type":"related"}],"termid":"GO:0006379"}


id: GO:0070342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of brown fat cells by cell division, resulting in the expansion of their population. A brown fat cell is a fat cell found the thermogenic form of adipose tissue found in newborns of many species.","definition_xrefs":["CL:0000449","GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat cell proliferation","termid":"GO:0070341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brown fat cell proliferation","synonyms":[{"name":"brown adipocyte proliferation","type":"exact"},{"name":"brown adipose cell proliferation","type":"exact"}],"termid":"GO:0070342"}


id: PBO:0050339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 41","termid":"PBO:0050339"}


id: GO:0055080
data:
  {"annotated_genes":["SJAG_03793","SJAG_01400","SJAG_04867","SJAG_01803","SJAG_03516","SJAG_05294","SJAG_04028","SJAG_04955","SJAG_00668","SJAG_03631","SJAG_04111","SJAG_01913","SJAG_02023","SJAG_00301","SJAG_02019","SJAG_00532","SJAG_02399","SJAG_03528","SJAG_01669","SJAG_01353","SJAG_04167","SJAG_04607","SJAG_02080","SJAG_04258","SJAG_03850","SJAG_04032","SJAG_04616","SJAG_04677","SJAG_01004","SJAG_03862","SJAG_04757","SJAG_03866","SJAG_02474","SJAG_00212","SJAG_02847","SJAG_02470","SJAG_03879","SJAG_02578","SJAG_02716","SJAG_02735","SJAG_00822","SJAG_01990","SJAG_04743","SJAG_01817","SJAG_01435","SJAG_04096","SJAG_00802","SJAG_00222","SJAG_04403","SJAG_00792","SJAG_00136","SJAG_02834","SJAG_04760","SJAG_03401","SJAG_04698","SJAG_00923","SJAG_01078","SJAG_04584","SJAG_04031","SJAG_01541","SJAG_04675","SJAG_01694","SJAG_04892","SJAG_01129","SJAG_02457","SJAG_01007","SJAG_02532","SJAG_02883","SJAG_00328","SJAG_00516","SJAG_01397"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90214,99890,88547,90206],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[92385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055070"},{"annotations":[87300,86811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[104754,110022,108437,114636,94433,97114,91792,109455,92912,91561,97727,111172,94221,111643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[92386,96254,73809,103946,89224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[92387,100356,109975,90162,85391,73810,88401,89049,103506,96581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[103679,86336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[91430,99898,113057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[93104,92844,91543,85630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[99899],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006880"},{"annotations":[89871,90825,99677,110430,98872,100409,86561,97325,92294,96255,89870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[113058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010960"},{"annotations":[101781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055075"},{"annotations":[108888,99892,88544,88548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[96606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030641"},{"annotations":[109870,83834,94922,83833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[61324,106876,61607,106875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[85967,96113,114786,86278,100012,84172,91763,95015,97735,98083,85438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of monoatomic cations within an organism or cell. 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id: PBO:0069739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1020, pseudogene","termid":"PBO:0069739"}


id: PBO:0066562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 1","termid":"PBO:0066562"}


id: GO:0003337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the metanephros.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition","termid":"GO:0060231"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric renal vesicle morphogenesis","termid":"GO:0072283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in metanephros morphogenesis","synonyms":[{"name":"metanephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:0003337"}


id: GO:0034711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an inhibin monomer, any of the polypeptides that combine to form activin and inhibin dimers.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"inhibin binding","secondary_identifiers":["GO:0048186","GO:0034712","GO:0048187"],"synonyms":[{"name":"inhibin alpha binding","type":"narrow"},{"name":"inhibin beta-A binding","type":"narrow"},{"name":"inhibin beta-B binding","type":"narrow"},{"name":"inhibin monomer binding","type":"exact"}],"termid":"GO:0034711"}


id: PBO:0065810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3D, member RAS oncogene family","termid":"PBO:0065810"}


id: GO:0061111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell and contributes to the progression of the lung over time from its initial formation to the mature organ.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"},{"relation_name":"is_a","term_name":"epithelial-mesenchymal cell signaling","termid":"GO:0060684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"epithelial-mesenchymal cell signaling involved in lung development","synonyms":[{"name":"epithelial-mesenchymal cell signalling involved in lung development","type":"exact"}],"termid":"GO:0061111"}


id: GO:0033299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of lysosomal enzymes by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"secretion of lysosomal enzymes","termid":"GO:0033299"}


id: PBO:0067844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 146","termid":"PBO:0067844"}


id: PBO:0058557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6499","termid":"PBO:0058557"}


id: PBO:0090759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A chaperone, NASP family, Sim3","termid":"PBO:0090759"}


id: PBO:0064617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 7","termid":"PBO:0064617"}


id: PBO:0027711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_multiseptate_cell_during_stationary_phase","termid":"PBO:0027711"}


id: GO:0097265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-HETE + NADP+ = 5-oxo-ETE + NADPH + H+.","definition_xrefs":["GOC:mw","PMID:1326548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"5(S)-hydroxyeicosatetraenoic acid dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-2161776"],"synonyms":[{"name":"5(S)-HETE dehydrogenase activity","type":"exact"},{"name":"5-HETE dehydrogenase activity","type":"exact"},{"name":"5-hydroxy-eicosatetraenoic acid dehydrogenase activity","type":"exact"}],"termid":"GO:0097265"}


id: PBO:0083544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps TRP1/YDR007W on opposite strand","termid":"PBO:0083544"}


id: PBO:0059162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin phosphatase Rho interacting protein pseudogene 1","termid":"PBO:0059162"}


id: PBO:0065830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6D, member RAS oncogene family","termid":"PBO:0065830"}


id: PBO:0076308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 4","termid":"PBO:0076308"}


id: PBO:0067383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 487, pseudogene","termid":"PBO:0067383"}


id: PBO:0002238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-S (predicted)","termid":"PBO:0002238"}


id: GO:1900599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of demethylkotanin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"demethylkotanin metabolic process","termid":"GO:1900597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"demethylkotanin biosynthetic process","synonyms":[{"name":"demethylkotanin anabolism","type":"exact"},{"name":"demethylkotanin biosynthesis","type":"exact"},{"name":"demethylkotanin formation","type":"exact"},{"name":"demethylkotanin synthesis","type":"exact"}],"termid":"GO:1900599"}


id: PBO:0088533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7a/L8","termid":"PBO:0088533"}


id: PBO:0062822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSER1 divergent transcript","termid":"PBO:0062822"}


id: GO:0036293
data:
  {"annotated_genes":["SJAG_00221","SJAG_00642","SJAG_04018","SJAG_03345","SJAG_01585","SJAG_01150"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107801,97318,105941,113069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[85381,112486],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen levels","termid":"GO:0070482"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_01585":null,"SJAG_03345":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to decreased oxygen levels","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to lowered oxygen levels","type":"exact"}],"termid":"GO:0036293","terms_by_termid":{"GO:0071456":null,"GO:1900039":null}}


id: GO:0047129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-2-[(R)-1-carboxyethylamino]pentanoate + H2O + NAD+ = L-2-aminopentanoate + H+ + NADH + pyruvate.","definition_xrefs":["EC:1.5.1.28","RHEA:21592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"opine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03732","MetaCyc:1.5.1.28-RXN"],"synonyms":[{"name":"(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate dehydrogenase (NAD, L-aminopentanoate-forming)","type":"related"},{"name":"(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate:NAD+ oxidoreductase (L-aminopentanoate-forming)","type":"related"}],"termid":"GO:0047129"}


id: FYPO:0004594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is branched, septated and elongated.","definition_xrefs":["PomBase:vw","PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched, elongated cell","termid":"FYPO:0001512"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"branched, elongated, septated cell","synonyms":[{"name":"branched, elongated, septated cell during mitotic cell cycle","type":"related"},{"name":"branched, elongated, septated cell during vegetative growth","type":"exact"},{"name":"branched, elongated, septated vegetative cell","type":"exact"},{"name":"branched, long, septated cell","type":"exact"}],"termid":"FYPO:0004594"}


id: GO:0045689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of antipodal cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of antipodal cell differentiation","termid":"GO:0045688"},{"relation_name":"negatively_regulates","term_name":"antipodal cell differentiation","termid":"GO:0009557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antipodal cell differentiation","synonyms":[{"name":"down regulation of antipodal cell differentiation","type":"exact"},{"name":"down-regulation of antipodal cell differentiation","type":"exact"},{"name":"downregulation of antipodal cell differentiation","type":"exact"},{"name":"inhibition of antipodal cell differentiation","type":"narrow"}],"termid":"GO:0045689"}


id: GO:0019139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N6-dimethylallyladenine + acceptor + H2O = adenine + 3-methylbut-2-enal + reduced electron acceptor.","definition_xrefs":["EC:1.5.99.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cytokinin dehydrogenase activity","secondary_identifiers":["RHEA:13625","GO:0046420","MetaCyc:1.5.99.12-RXN","MetaCyc:PWY-2841"],"synonyms":[{"name":"6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"related"},{"name":"N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"related"},{"name":"N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"related"},{"name":"cytokinin oxidase activity","type":"related"}],"termid":"GO:0019139"}


id: PBO:0054410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1806","termid":"PBO:0054410"}


id: PBO:0079844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-13 homolog C","termid":"PBO:0079844"}


id: PBO:0113267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B; hydrolyses phosphatidylserine; minor activity against cardiolipin and PtdEtn; required for lysis of autophagic and CVT bodies; targeted to the vacuole via the Pep1p-dependent endosomal VPS pathway; targeted to intravacuolar vesicles during autophagy by the MVB pathway; maintains lipid droplet quantity after the diauxic shift; regulates lipolysis; single membrane spanning protein with cytosolic N-term and the rest in the ER lumen; expression regulated by Yap1p during autophagy","termid":"PBO:0113267"}


