# terms

id: PBO:0088098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Upstream serine/threonine kinase for the SNF1 complex; plays a role in pseudohyphal groth; partially redundant with Elm1p and Tos3p; members of this family have functional orthology with LKB1, a mammalian kinase associated with Peutz-Jeghers cancer-susceptibility syndrome; SAK1 has a paralog, TOS3, that arose from the whole genome duplication","termid":"PBO:0088098"}


id: PBO:0052364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 13A","termid":"PBO:0052364"}


id: GO:0062193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: beta-D-ribopyranose = beta-D-ribofuranose, and beta-allofuranose = beta-allopyranose.","definition_xrefs":["EC:5.4.99.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"D-ribose pyranase activity","termid":"GO:0062193"}


id: GO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a pro-T cell becomes committed to becoming an NK T cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell lineage commitment","termid":"GO:0002363"},{"relation_name":"part_of","term_name":"NK T cell differentiation","termid":"GO:0001865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell lineage commitment","synonyms":[{"name":"NK T lymphocyte lineage commitment","type":"exact"},{"name":"NK T-cell lineage commitment","type":"exact"},{"name":"NK T-lymphocyte lineage commitment","type":"exact"},{"name":"natural killer T lymphocyte lineage commitment","type":"exact"},{"name":"natural killer T-cell lineage commitment","type":"exact"},{"name":"natural killer T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002364"}


id: GO:0046886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"positively_regulates","term_name":"hormone biosynthetic process","termid":"GO:0042446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hormone biosynthetic process","synonyms":[{"name":"activation of hormone biosynthetic process","type":"narrow"},{"name":"positive regulation of hormone anabolism","type":"exact"},{"name":"positive regulation of hormone biosynthesis","type":"exact"},{"name":"positive regulation of hormone formation","type":"exact"},{"name":"positive regulation of hormone synthesis","type":"exact"},{"name":"stimulation of hormone biosynthetic process","type":"narrow"},{"name":"up regulation of hormone biosynthetic process","type":"exact"},{"name":"up-regulation of hormone biosynthetic process","type":"exact"},{"name":"upregulation of hormone biosynthetic process","type":"exact"}],"termid":"GO:0046886"}


id: PBO:0062139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 6","termid":"PBO:0062139"}


id: GO:0047148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + methylammonium = N-methyl-L-glutamate + NH4.","definition_xrefs":["RHEA:15837","EC:2.1.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"methylamine-glutamate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01586","MetaCyc:2.1.1.21-RXN"],"synonyms":[{"name":"N-methylglutamate synthase activity","type":"related"},{"name":"methylamine-glutamate methyltransferase activity","type":"related"},{"name":"methylamine:L-glutamate N-methyltransferase activity","type":"related"}],"termid":"GO:0047148"}


id: PBO:0042646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 21 pseudogene","termid":"PBO:0042646"}


id: GO:0098547
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the Golgi membrane that faces the lumen.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"Golgi membrane","termid":"GO:0000139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005794"],"is_obsolete":false,"name":"lumenal side of Golgi membrane","termid":"GO:0098547"}


id: PBO:0078724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAG) 4-1","termid":"PBO:0078724"}


id: GO:1990509
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex involved in the disassembly of Mago-Y14 from the spliced mRNA during first round of translation, independently of the translational machinery. Conserved from fission yeast to humans.","definition_xrefs":["PMID:14968132","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PYM-mago-Y14 complex","synonyms":[{"name":"PYM-mago-RNA-binding protein 8A complex","type":"exact"},{"name":"wibg-mago-tsu complex","type":"exact"}],"termid":"GO:1990509"}


id: PBO:0059957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 2","termid":"PBO:0059957"}


id: GO:0032530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a microvillus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"regulates","term_name":"microvillus organization","termid":"GO:0032528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microvillus organization","synonyms":[{"name":"regulation of microvillus organisation","type":"exact"},{"name":"regulation of microvillus organization and biogenesis","type":"related"}],"termid":"GO:0032530"}


id: PBO:0002631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp8","termid":"PBO:0002631"}


id: PBO:0080232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"very low density lipoprotein receptor","termid":"PBO:0080232"}


id: PBO:0046504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F1-regulated inhibitor of cell death","termid":"PBO:0046504"}


id: PBO:0087209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; seven-beta-strand lysine methyltransferase which dimethylates translation elongation factor EF2 (Eft1p and Eft2p) at lysine 613 and methylates EF3 (Yef3p) at lysine 187; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; involved in regulation of translational termination; predicted involvement in ribosome biogenesis","termid":"PBO:0087209"}


id: PBO:0028430
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pyridoxine_import","termid":"PBO:0028430"}


id: CHEBI:29108
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A calcium cation that has formula Ca.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium(2+)","termid":"CHEBI:29108"}


id: GO:0010348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Li+(in) + H+(out) = Li+(out) + H+(in).","definition_xrefs":["PMID:17270011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"lithium:proton antiporter activity","synonyms":[{"name":"lithium:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0010348"}


id: FYPO:0007357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell does not contain a detectable Smp focus.","definition_xrefs":["PomBase:mah","PMID:31811152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"is_a","term_name":"altered level of macromolecular complex","termid":"FYPO:0007316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"Smp focus absent from cell","synonyms":[{"name":"Sme2 focus absent from cell","type":"narrow"},{"name":"Smp dot complex absent from cell","type":"exact"},{"name":"Smp focus absent from cell during meiotic cell cycle","type":"exact"},{"name":"absence of Smp focus","type":"exact"},{"name":"absent Smp focus","type":"exact"}],"termid":"FYPO:0007357"}


id: PBO:0014743
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"changed_by","termid":"PBO:0014743"}


id: PBO:0068636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 16, pseudogene","termid":"PBO:0068636"}


id: GO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The change in form (cell shape and size) that contributes to sexual reproduction in order to facilitate direct contact between the compatible mating types in organisms that undergo pheromone-induced unidirectional conjugation.","definition_xrefs":["GOC:clt"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular morphogenesis involved in pheromone-induced unidirectional conjugation (obsolete GO:0000764)","synonyms":[{"name":"cellular morphogenesis during pheromone-induced unidirectional","type":"related"},{"name":"cellular morphogenesis involved in pheromone-induced unidirectional conjugation","type":"exact"}],"termid":"GO:0000764"}


id: PBO:0045690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain roadblock-type 1","termid":"PBO:0045690"}


id: PBO:0028115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tributyltin","termid":"PBO:0028115"}


id: GO:0045700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spermatid nuclear differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of nucleus organization","termid":"GO:1903353"},{"relation_name":"regulates","term_name":"spermatid nucleus differentiation","termid":"GO:0007289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spermatid nuclear differentiation","termid":"GO:0045700"}


id: PBO:0072464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 28","termid":"PBO:0072464"}


id: PBO:0027552
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_replication_origin","termid":"PBO:0027552"}


id: PBO:0044184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNS antisense RNA 1","termid":"PBO:0044184"}


id: GO:0010409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving extensins, a group of 60-90 kDNA hydroxyproline (Hyp)-rich glycoproteins whose polypeptide backbone consists of many repeats of structural Ser(Hyp)4-6 motifs, with heavily glycosylated 1-4 arabinose residues O-linked to contiguous stretches of Hyp residues, with most of the Ser residues being O-galactosylated.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall hydroxyproline-rich glycoprotein metabolic process","termid":"GO:0010404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"extensin metabolic process","synonyms":[{"name":"extensin metabolism","type":"exact"}],"termid":"GO:0010409"}


id: GO:0160008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[protein] = (2E)-2-butenoate + L-lysyl-[protein].","definition_xrefs":["PMID:28497810","PMID:34608293","PMID:30279482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"protein decrotonylase activity","secondary_identifiers":["RHEA:69172"],"termid":"GO:0160008"}


id: PBO:0089797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CREG1 ortholog","termid":"PBO:0089797"}


id: PBO:0079837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC5B antisense RNA 1","termid":"PBO:0079837"}


id: PBO:0001554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 beta subunit (predicted)","termid":"PBO:0001554"}


id: PBO:0050937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 7","termid":"PBO:0050937"}


id: PATO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's lacking susceptibilty toward an external stimulus.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"susceptibility toward","termid":"PATO:0001043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insusceptible toward","synonyms":[{"name":"insusceptible","type":"exact"}],"termid":"PATO:0001153"}


id: PBO:0075263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 16","termid":"PBO:0075263"}


id: PBO:0058543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6089","termid":"PBO:0058543"}


id: FYPO:0005958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dephosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein dephosphorylation during vegetative growth","termid":"FYPO:0005957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein dephosphorylation during mitosis","synonyms":[{"name":"decreased protein dephosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein dephosphorylation during mitotic M phase","type":"related"},{"name":"decreased protein dephosphorylation during mitotic M-phase","type":"related"},{"name":"decreased protein dephosphorylation during mitotic nuclear division","type":"exact"},{"name":"decreased protein/peptide dephosphorylation during mitosis","type":"exact"},{"name":"reduced protein dephosphorylation during mitosis","type":"exact"}],"termid":"FYPO:0005958"}


id: PBO:0029330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2A_phosphorylation","termid":"PBO:0029330"}


id: PBO:0043890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticotropin releasing hormone receptor 2","termid":"PBO:0043890"}


id: PBO:0077987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 9-1","termid":"PBO:0077987"}


id: PBO:0004757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 nucleotide exchange factor (predicted)","termid":"PBO:0004757"}


id: FYPO:0003603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiosis I","synonyms":[{"name":"abnormal first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003603"}


id: PBO:0060940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFE2 like bZIP transcription factor 3","termid":"PBO:0060940"}


id: PBO:0003804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof9","termid":"PBO:0003804"}


id: PBO:0003913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosidase Mag2","termid":"PBO:0003913"}


id: PBO:0088041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); catalytic subunit of SCF ubiquitin-protein ligase complex (together with Skp1p, Rbx1p, Cdc53p, and an F-box protein) that regulates cell cycle progression by targeting key substrates for degradation; protein abundance increases in response to DNA replication stress; human CDC34 functionally complements the thermosensitivity of the cdc34-2 mutant","termid":"PBO:0088041"}


id: GO:0015677
data:
  {"annotated_genes":["SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108886],"is_not":false,"summary":null,"term":"GO:0015677"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions into a cell or organelle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transport","termid":"GO:0006825"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"copper ion import","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"copper ion uptake","type":"exact"}],"termid":"GO:0015677","terms_by_termid":{"GO:0015677":null}}


id: PBO:0060834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 like E3 ubiquitin protein ligase","termid":"PBO:0060834"}


id: PR:Q10160
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rmi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ-mediated genome instability protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.03c","synonyms":[{"name":"Spom972h-rmi1","type":"exact"}],"termid":"PR:Q10160"}


id: GO:0005755
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-transporting ATP synthase, coupling factor CF(0) (obsolete GO:0005755)","synonyms":[{"name":"hydrogen-transporting ATP synthase, coupling factor CF(0)","type":"exact"}],"termid":"GO:0005755"}


id: FYPO:0004733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains fewer cytoplasmic microtubules nucleated from the equatorial microtubule organizing center than normal.","definition_xrefs":["PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in decreased numbers","termid":"FYPO:0003430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002399","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"cytoplasmic microtubules nucleated from eMTOC present in decreased numbers","synonyms":[{"name":"cytoplasmic microtubules nucleated from eMTOC present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubules nucleated from eMTOC present in decreased numbers during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubules nucleated from eMTOC present in reduced numbers","type":"exact"},{"name":"cytoplasmic microtubules nucleated from equatorial microtubule organizing center present in decreased numbers","type":"exact"},{"name":"decreased number of cytoplasmic microtubules nucleated from eMTOC","type":"exact"},{"name":"reduced number of cytoplasmic microtubules nucleated from eMTOC","type":"exact"}],"termid":"FYPO:0004733"}


id: PR:O14092
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5-aminolevulinate synthase, erythroid-specific, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01637","PANTHER:PTHR13693:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminolevulinate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.09","secondary_identifiers":["UniProtKB:O14092"],"synonyms":[{"name":"5-aminolevulinic acid synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALAS2","type":"exact"},{"name":"delta-ALA synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"delta-aminolevulinate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14092"}


id: PBO:0075758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine repetitive matrix 1","termid":"PBO:0075758"}


id: PBO:0027855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_vacuolar_membrane","termid":"PBO:0027855"}


id: PBO:0065566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin F receptor","termid":"PBO:0065566"}


id: PBO:0085675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in polar growth, functionally redundant with Boi2p; required for fusion of secretory vesicles with plasma membrane at sites of polarized growth; interacts with bud-emergence protein Bem1p; contains an SH3 (src homology 3) domain and a PH (pleckstrin homology) domain; relocalizes from bud neck to cytoplasm upon DNA replication stress; BOI1 has a paralog, BOI2, that arose from the whole genome duplication","termid":"PBO:0085675"}


id: GO:0033347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a tetrose, any monosaccharide with a chain of four carbon atoms in the molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tetrose metabolic process","synonyms":[{"name":"tetrose metabolism","type":"exact"}],"termid":"GO:0033347"}


id: FYPO:0004126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"abolished histone H3-K4 trimethylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 trimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me3 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004126"}


id: PBO:0059766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 40","termid":"PBO:0059766"}


id: SO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methyl_2_thiouridine","secondary_identifiers":["RNAMOD:059"],"synonyms":[{"name":"5-methyl-2-thiouridine","type":"exact"},{"name":"five methyl 2 thiouridine","type":"exact"},{"name":"m5s2U","type":"exact"}],"termid":"SO:0001351"}


id: PBO:0000427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z4","termid":"PBO:0000427"}


id: PBO:0036158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_invertase_activity_during_glucose_starvation","termid":"PBO:0036158"}


id: PBO:0033816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic APC inhibitor Mes1","termid":"PBO:0033816"}


id: PBO:0059524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded heavy strand origin of replication","termid":"PBO:0059524"}


id: PBO:0054960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2374","termid":"PBO:0054960"}


id: GO:0106005
data:
  {"annotated_genes":["SJAG_04034"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59663],"is_not":false,"summary":null,"term":"GO:0106005"}]},"cv_name":"biological_process","definition":"The process whereby a guanine in 5-cap is methylated at the N7 position of guanine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA (guanine-N7)-methylation","termid":"GO:0036265"},{"relation_name":"part_of","term_name":"7-methylguanosine RNA capping","termid":"GO:0009452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04034":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA 5'-cap (guanine-N7)-methylation","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0106005","terms_by_termid":{"GO:0106005":null}}


id: GO:0047616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + NADP+ = 2,3-dehydroacyl-CoA + NADPH + H+.","definition_xrefs":["MetaCyc:ACYL-COA-DEHYDROGENASE-NADP+-RXN","EC:1.3.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"acyl-CoA dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:22460"],"synonyms":[{"name":"2-enoyl-CoA reductase activity","type":"related"},{"name":"acyl-CoA:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"crotonyl coenzyme A reductase activity","type":"related"},{"name":"dehydrogenase, acyl coenzyme A (nicotinamide adenine dinucleotide phosphate)","type":"related"},{"name":"enoyl coenzyme A reductase activity","type":"related"}],"termid":"GO:0047616"}


id: GO:0030301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cholesterol transport","termid":"GO:0030301"}


id: GO:0102264
data:
  {"annotated_genes":["SJAG_03236"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100777],"is_not":false,"summary":null,"term":"GO:0102264"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil20 in tRNA + NAD(P) = H+ + a uracil20 in tRNA + NAD(P)H.","definition_xrefs":["GOC:pz","EC:1.3.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674","GO:0140101","GO:0140098"],"is_obsolete":false,"name":"tRNA-dihydrouridine20 synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12456"],"termid":"GO:0102264","terms_by_termid":{"GO:0102264":null}}


id: GO:1905952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipid localization.","definition_xrefs":["GO_REF:0000058","PMID:17564681","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid localization","synonyms":[{"name":"regulation of lipid localisation","type":"exact"}],"termid":"GO:1905952"}


id: PBO:0001130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein Swi6","termid":"PBO:0001130"}


id: GO:1903805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-valine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:23895341","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-valine transmembrane transport","termid":"GO:1903785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-valine import across plasma membrane","secondary_identifiers":["GO:0090468"],"synonyms":[{"name":"L-valine import into cell","type":"exact"},{"name":"valine import","type":"narrow"}],"termid":"GO:1903805"}


id: GO:0006750
data:
  {"annotated_genes":["SJAG_03494","SJAG_02599","SJAG_00988","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89399,93124,104523,114238],"is_not":false,"summary":null,"term":"GO:0006750"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins.","definition_xrefs":["GOC:al","GOC:ai","ISBN:0198506732","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione metabolic process","termid":"GO:0006749"},{"relation_name":"is_a","term_name":"nonribosomal peptide biosynthetic process","termid":"GO:0019184"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03494":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glutathione biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLUTATHIONESYN-PWY"],"synonyms":[{"name":"glutathione anabolism","type":"exact"},{"name":"glutathione biosynthesis","type":"exact"},{"name":"glutathione formation","type":"exact"},{"name":"glutathione synthesis","type":"exact"}],"termid":"GO:0006750","terms_by_termid":{"GO:0006750":null}}


id: PBO:0026975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_in_mitochondrion","termid":"PBO:0026975"}


id: PBO:0071457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 63","termid":"PBO:0071457"}


id: PBO:0043886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element modulator","termid":"PBO:0043886"}


id: GO:1990568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A centromere complex assembly protein that is required for the deposition of CENP-A on the centromere. The Mis18 complex localizes to centromeres just prior to the pre-nucleosomal HJURP/CENP-A/H4 complex and is absolutely required for the CENP-A-specific chaperone, Holliday junction recognition protein (HJURP) to reach the centromeres. Plk1 phosphorylation activates Mis18 complex recruitment to the centromeres during G1. CDK phosphorylation of MISBP1 during G2 and mitosis, prior to the metaphase-to-anaphase transition, negatively regulates complex assembly.","definition_xrefs":["PMID:25036634","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete MIS18 complex (obsolete GO:1990568)","synonyms":[{"name":"MIS18 complex","type":"exact"}],"termid":"GO:1990568"}


id: PBO:0078699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 1-2","termid":"PBO:0078699"}


id: PBO:0063869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class B","termid":"PBO:0063869"}


id: PBO:0050816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 1","termid":"PBO:0050816"}


id: PR:O13910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar ribonucleoprotein protein MPP10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00881","PANTHER:PTHR17039:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar ribonucleoprotein protein mpp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.03","secondary_identifiers":["UniProtKB:O13910"],"synonyms":[{"name":"Spom972h-MPHOSPH10","type":"exact"}],"termid":"PR:O13910"}


id: PBO:0005751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tyrosine-tRNA ligase (predicted)","termid":"PBO:0005751"}


id: GO:0034467
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an esterosome.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"esterosome","termid":"GO:0033117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"esterosome lumen","termid":"GO:0034467"}


id: GO:0045944
data:
  {"annotated_genes":["SJAG_01952","SJAG_01199","SJAG_01403","SJAG_03346","SJAG_03143","SJAG_00297","SJAG_04712","SJAG_02138","SJAG_00766","SJAG_04421","SJAG_03067","SJAG_03484","SJAG_01583","SJAG_06576","SJAG_00164","SJAG_02255","SJAG_01778","SJAG_02326","SJAG_05247","SJAG_03183","SJAG_04036","SJAG_00641","SJAG_06638","SJAG_03501","SJAG_01243","SJAG_00973","SJAG_03622","SJAG_01150","SJAG_03735","SJAG_00342","SJAG_02057","SJAG_03241","SJAG_04009","SJAG_00987","SJAG_02311","SJAG_01805","SJAG_05341","SJAG_01771","SJAG_02474","SJAG_04611","SJAG_01205","SJAG_02218","SJAG_00613","SJAG_01113","SJAG_01151","SJAG_04839","SJAG_03421","SJAG_01307","SJAG_00698","SJAG_01916","SJAG_03879","SJAG_03967","SJAG_02494","SJAG_05153","SJAG_02723","SJAG_02472","SJAG_06599","SJAG_02406","SJAG_02730","SJAG_05343","SJAG_02196","SJAG_02252","SJAG_00269","SJAG_04749","SJAG_00802","SJAG_04855","SJAG_00163","SJAG_01062","SJAG_04206","SJAG_00210","SJAG_03981","SJAG_04249","SJAG_03590","SJAG_02810","SJAG_00909","SJAG_04647","SJAG_02956","SJAG_02938","SJAG_04755","SJAG_02415","SJAG_03289","SJAG_04705","SJAG_03519","SJAG_04191","SJAG_04813","SJAG_02849","SJAG_01441","SJAG_02592","SJAG_05203","SJAG_03538","SJAG_02391","SJAG_03573","SJAG_00266","SJAG_03061","SJAG_04820","SJAG_04092","SJAG_02773","SJAG_01694","SJAG_05313","SJAG_04551","SJAG_04099","SJAG_01740","SJAG_00904","SJAG_03118","SJAG_00156","SJAG_02551","SJAG_01149","SJAG_02671","SJAG_04388","SJAG_05288","SJAG_00693","SJAG_00150"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60604,61457,62334,62585,64504,65568,67786,67831,68721,69816,75346,83553,83726,84164,84293,84352,85163,86212,87513,88842,89387,89813,89910,90442,90478,90843,91185,91637,91801,91911,92389,93410,93628,93629,93630,93631,93632,94530,94680,95394,95599,96582,96593,98249,98331,98377,98794,98959,99264,100536,100863,101918,102191,103144,103672,104064,104549,104666,104725,104896,105139,105276,105410,105445,105784,106818,106958,107006,107842,107972,108014,108388,109731,109780,110178,110668,110921,111094,112164,112370,112562,113071,113079,113448,113560,114125,114291,115143,115144],"is_not":false,"summary":null,"term":"GO:0045944"},{"annotations":[84096,102746,85582,89592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"},{"annotations":[111274,85830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[102123,105127,111382,91912,113080,99155,101447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"},{"annotations":[104839,102449,90554,94777,114987,86793,86483,91487,101773,104812,95125,105128,83588,90443,98056,110818,99520,99782,111383,91968,102317,102124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"positively_regulates","term_name":"transcription by RNA polymerase 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regulation of transcription by RNA polymerase II","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0010552","GO:0045817"],"synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter","type":"related"},{"name":"positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0045944","terms_by_termid":{"GO:0032968":null,"GO:0045899":null,"GO:0045944":null,"GO:0060261":null,"GO:0060963":null}}


id: PBO:0039661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 2 subunit mu 1","termid":"PBO:0039661"}


id: GO:0010159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which information that determines the correct position at which animal organ primordia are formed is generated and perceived resulting in correct positioning of the new animal organ.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of animal organ position","termid":"GO:0010159"}


id: PBO:0051548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 7 receptor","termid":"PBO:0051548"}


id: PBO:0017694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family Csr1 (predicted)","termid":"PBO:0017694"}


id: PBO:0005909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfonate/alpha-ketoglutare dioxygenase (predicted)","termid":"PBO:0005909"}


id: GO:1901459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to acetate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to acetate","termid":"GO:1901457"},{"relation_name":"positively_regulates","term_name":"response to acetate","termid":"GO:0010034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to acetate","synonyms":[{"name":"activation of response to acetate","type":"narrow"},{"name":"up regulation of response to acetate","type":"exact"},{"name":"up-regulation of response to acetate","type":"exact"},{"name":"upregulation of response to acetate","type":"exact"}],"termid":"GO:1901459"}


id: GO:0102506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-feruloyl-beta-D-glucose = cyanin betaine + ferulate + H+.","definition_xrefs":["RHEA:35427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose) activity","secondary_identifiers":["EC:2.4.1.299","KEGG_REACTION:R10261","MetaCyc:RXN-13967"],"termid":"GO:0102506"}


id: MOD:01380
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-tryptophan residue by a thioether bond to form 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide.","definition_xrefs":["PubMed:4865716","PubMed:363352","RESID:AA0451","PubMed:18552824","PubMed:11805306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide","synonyms":[{"name":"2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide","type":"exact"},{"name":"2-((2R)-2-amino-2carboxyethyl)sulfinyl-3-((2S)-2-amino-2-carboxyethyl)-1H-indole","type":"exact"},{"name":"6'-hydroxy-S-oxo-tryptathionine","type":"exact"},{"name":"CROSSLNK 2'-cysteinyl-6'-hydroxytryptophan sulfoxide (Trp-Cys)","type":"exact"}],"termid":"MOD:01380"}


id: FYPO:0005082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at long terminal repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome at long terminal repeat","termid":"FYPO:0002575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin at long terminal repeat","synonyms":[{"name":"normal protein localisation to chromatin at long terminal repeat","type":"exact"},{"name":"normal protein localization to chromatin at LTR","type":"exact"},{"name":"normal protein localization to chromatin at long terminal repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at long terminal repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0005082"}


id: PBO:0063507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 and DNA damage regulated 1","termid":"PBO:0063507"}


id: PBO:0017476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-depends_on","termid":"PBO:0017476"}


id: PBO:0043095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 7","termid":"PBO:0043095"}


id: GO:2000555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 1 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell cytokine production","termid":"GO:0002725"},{"relation_name":"is_a","term_name":"negative regulation of T-helper 1 type immune response","termid":"GO:0002826"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell cytokine production","termid":"GO:2000554"},{"relation_name":"negatively_regulates","term_name":"T-helper 1 cell cytokine production","termid":"GO:0035744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of T-helper 1 cell cytokine production","synonyms":[{"name":"negative regulation of Th1 cell cytokine production","type":"exact"}],"termid":"GO:2000555"}


id: GO:0071608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage inflammatory protein 1 alpha due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"macrophage inflammatory protein-1 alpha production","synonyms":[{"name":"CCL3 production","type":"exact"},{"name":"MIP-1a production","type":"exact"},{"name":"chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071608"}


id: PBO:0047444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor Ic, pseudogene","termid":"PBO:0047444"}


id: SO:0001048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region located within an inversion site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site_specific_recombination_target_region","termid":"SO:0000342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_site_part","synonyms":[{"name":"inversion site part","type":"exact"}],"termid":"SO:0001048"}


id: PBO:0011509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome BAR domain protein Pil1","termid":"PBO:0011509"}


id: PBO:0110820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter Vsb1","termid":"PBO:0110820"}


id: PBO:0077352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 92","termid":"PBO:0077352"}


id: PBO:0063286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 12","termid":"PBO:0063286"}


id: GO:0003731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with the 7-methylguanosine cap at the 5' end of a nascent messenger RNA transcript.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cap binding (obsolete GO:0003731)","synonyms":[{"name":"mRNA cap binding","type":"exact"}],"termid":"GO:0003731"}


id: FYPO:0004310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of M phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal duration of mitotic M phase","secondary_identifiers":["FYPO:0005632"],"synonyms":[{"name":"normal duration of M phase of mitotic cell cycle","type":"exact"},{"name":"normal duration of mitosis","type":"related"},{"name":"normal duration of mitosis during vegetative growth","type":"related"},{"name":"normal duration of mitotic division","type":"related"},{"name":"normal duration of mitotic nuclear division","type":"related"}],"termid":"FYPO:0004310"}


id: PBO:0050812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1","termid":"PBO:0050812"}


id: GO:0019506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenylmercury acetate, an organomercurial compound composed of a mercury atom attached to a benzene ring and an acetate group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"phenylmercury acetate metabolic process","termid":"GO:0046412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"phenylmercury acetate catabolic process","secondary_identifiers":["MetaCyc:P641-PWY"],"synonyms":[{"name":"phenylmercury acetate breakdown","type":"exact"},{"name":"phenylmercury acetate catabolism","type":"exact"},{"name":"phenylmercury acetate degradation","type":"exact"}],"termid":"GO:0019506"}


id: GO:0047300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxamine + pyruvate = L-alanine + pyridoxal.","definition_xrefs":["EC:2.6.1.30","RHEA:12841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"pyridoxamine-pyruvate transaminase activity","secondary_identifiers":["KEGG_REACTION:R01712","MetaCyc:2.6.1.30-RXN"],"synonyms":[{"name":"pyridoxamine--pyruvate aminotransferase activity","type":"related"},{"name":"pyridoxamine-pyruvate aminotransferase activity","type":"exact"},{"name":"pyridoxamine-pyruvic transaminase","type":"broad"},{"name":"pyridoxamine:pyruvate aminotransferase activity","type":"related"},{"name":"pyridoxamineu-pyruvic transaminase activity","type":"related"}],"termid":"GO:0047300"}


id: PBO:0070845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 24","termid":"PBO:0070845"}


id: SO:0001660
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An element that only exists within the promoter region of a eukaryotic gene.","definition_xrefs":["GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_promoter_element","termid":"SO:0002309"},{"relation_name":"part_of","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core_eukaryotic_promoter_element","synonyms":[{"name":"core eukaryotic promoter element","type":"exact"},{"name":"general transcription factor binding site","type":"related"}],"termid":"SO:0001660"}


id: PBO:0076178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 2A member 1","termid":"PBO:0076178"}


id: PR:O74354
data:
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id: GO:0070293
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id: FYPO:0002990
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id: GO:0018746
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id: GO:0072680
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id: PBO:0088463
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id: GO:1902688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of NAD metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:di","GOC:TermGenie","PMID:19846558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"regulates","term_name":"NAD metabolic process","termid":"GO:0019674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"regulation of NAD metabolic process","synonyms":[{"name":"regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"regulation of NAD metabolism","type":"exact"},{"name":"regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"regulation of oxidized NAD metabolic process","type":"exact"},{"name":"regulation of oxidized NAD metabolism","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:1902688"}


id: FYPO:0002399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton","termid":"FYPO:0002397"},{"relation_name":"output_of","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton","synonyms":[{"name":"abnormal microtubule cytoskeleton physical object quality","type":"exact"},{"name":"disorganized microtubule cytoskeleton","type":"related"}],"termid":"FYPO:0002399"}


id: GO:0046348
data:
  {"annotated_genes":["SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any amino sugar, sugars containing an amino group in place of a hydroxyl group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00620":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino sugar catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amino sugar breakdown","type":"exact"},{"name":"amino sugar catabolism","type":"exact"},{"name":"amino sugar degradation","type":"exact"},{"name":"aminosaccharide catabolic process","type":"exact"},{"name":"aminosaccharide catabolism","type":"exact"}],"termid":"GO:0046348","terms_by_termid":{"GO:0006032":null}}


id: FYPO:0006830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to replete levels of zinc ion is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:29529046","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during cellular response to replete zinc","synonyms":[{"name":"normal RNA accumulation during cellular response to replete zinc","type":"related"},{"name":"normal RNA level during cellular response to replete zinc during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to replete zinc during vegetative growth","type":"exact"},{"name":"normal RNA level during replete zinc","type":"exact"},{"name":"normal RNA level in response to replete zinc","type":"exact"},{"name":"normal mRNA level during cellular response to replete zinc","type":"narrow"},{"name":"normal transcript level during cellular response to replete zinc","type":"exact"}],"termid":"FYPO:0006830"}


id: PR:O13733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-terminal kinase-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01548","PRO:DNx","PANTHER:PTHR12984:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain-containing protein ppk3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.13","secondary_identifiers":["UniProtKB:O13733"],"synonyms":[{"name":"Spom972h-SCYL1","type":"exact"}],"termid":"PR:O13733"}


id: GO:0042462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve.","definition_xrefs":["GOC:jl","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell development","termid":"GO:0042461"},{"relation_name":"part_of","term_name":"eye photoreceptor cell differentiation","termid":"GO:0001754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye photoreceptor cell development","termid":"GO:0042462"}


id: FYPO:0005172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of uracil into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal uracil import","termid":"FYPO:0005170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased uracil import","synonyms":[{"name":"increased uracil import across plasma membrane","type":"exact"},{"name":"increased uracil import during mitotic cell cycle","type":"related"},{"name":"increased uracil import during vegetative growth","type":"exact"},{"name":"increased uracil import into cell","type":"exact"},{"name":"increased uracil uptake","type":"exact"}],"termid":"FYPO:0005172"}


id: GO:0033183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of a ubiquitin group to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone ubiquitination (obsolete GO:0033183)","termid":"GO:0033183"}


id: GO:1903430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell maturation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17459944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of cell maturation","termid":"GO:1903429"},{"relation_name":"negatively_regulates","term_name":"cell maturation","termid":"GO:0048469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell maturation","synonyms":[{"name":"down regulation of cell maturation","type":"exact"},{"name":"down regulation of functional differentiation","type":"related"},{"name":"down-regulation of cell maturation","type":"exact"},{"name":"down-regulation of functional differentiation","type":"related"},{"name":"downregulation of cell maturation","type":"exact"},{"name":"downregulation of functional differentiation","type":"related"},{"name":"inhibition of cell maturation","type":"narrow"},{"name":"inhibition of functional differentiation","type":"related"},{"name":"negative regulation of functional differentiation","type":"related"}],"termid":"GO:1903430"}


id: PBO:0060840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament heavy pseudogene 1","termid":"PBO:0060840"}


id: PBO:0076341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 9","termid":"PBO:0076341"}


id: PBO:0085856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus and is induced in response to the DNA-damaging agent MMS","termid":"PBO:0085856"}


id: PBO:0036323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get3 (predicted)","termid":"PBO:0036323"}


id: PBO:0040209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL transcriptional regulator 2","termid":"PBO:0040209"}


id: GO:2000112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cellular macromolecule biosynthetic process.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular macromolecule biosynthetic process (obsolete GO:2000112)","synonyms":[{"name":"regulation of cellular biopolymer biosynthetic process","type":"exact"},{"name":"regulation of cellular macromolecule anabolism","type":"exact"},{"name":"regulation of cellular macromolecule biosynthesis","type":"exact"},{"name":"regulation of cellular macromolecule formation","type":"exact"},{"name":"regulation of cellular macromolecule synthesis","type":"exact"}],"termid":"GO:2000112"}


id: PBO:0087632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; essential for the integrity and function of EGO; gene exhibits synthetic genetic interaction with MSS4","termid":"PBO:0087632"}


id: PR:Q9HE12
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 23 member 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine permease C1399.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.01c","secondary_identifiers":["UniProtKB:Q9HE12"],"synonyms":[{"name":"Spom972h-SLC23A2","type":"exact"}],"termid":"PR:Q9HE12"}


id: PBO:0053426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 368","termid":"PBO:0053426"}


id: GO:0051907
data:
  {"annotated_genes":["SJAG_05256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91643],"is_not":false,"summary":null,"term":"GO:0051907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione = formaldehyde + glutathione.","definition_xrefs":["EC:4.4.1.22","RHEA:22488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["UM-BBD_reactionID:r1145","KEGG_REACTION:R06982","MetaCyc:RXN-2961"],"synonyms":[{"name":"Gfa","type":"related"},{"name":"S-(hydroxymethyl)glutathione formaldehyde-lyase (glutathione-forming)","type":"related"},{"name":"S-(hydroxymethyl)glutathione formaldehyde-lyase activity","type":"related"},{"name":"glutathione-dependent formaldehyde-activating enzyme activity","type":"exact"}],"termid":"GO:0051907","terms_by_termid":{"GO:0051907":null}}


id: PATO:0002235
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tapered shape quality inhering in a bearer by virtue of the bearer's being flat, slender, and tapering to a point.","definition_xrefs":["PATOC:JE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tapered","termid":"PATO:0001500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blade-like","synonyms":[{"name":" sword-like","type":"exact"},{"name":"blade-shaped","type":"exact"},{"name":"ensiform ","type":"exact"},{"name":"sword-shaped","type":"exact"}],"termid":"PATO:0002235"}


id: FYPO:0002901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromere during vegetative growth","termid":"FYPO:0002574"},{"relation_name":"is_a","term_name":"normal protein localization to kinetochore","termid":"FYPO:0005042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to kinetochore during vegetative growth","synonyms":[{"name":"normal protein localisation to kinetochore during vegetative growth","type":"exact"},{"name":"normal protein localization to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002901"}


id: GO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-glutamate import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of L-glutamate import across plasma membrane","termid":"GO:0002036"},{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"negatively_regulates","term_name":"L-glutamate import across plasma membrane","termid":"GO:0098712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of L-glutamate import across plasma membrane","secondary_identifiers":["GO:1900921"],"synonyms":[{"name":"down regulation of L-glutamate import","type":"exact"},{"name":"down regulation of L-glutamate transport","type":"broad"},{"name":"down regulation of L-glutamate uptake","type":"related"},{"name":"down-regulation of L-glutamate import","type":"exact"},{"name":"down-regulation of L-glutamate transport","type":"broad"},{"name":"down-regulation of L-glutamate uptake","type":"related"},{"name":"downregulation of L-glutamate import","type":"exact"},{"name":"downregulation of L-glutamate transport","type":"broad"},{"name":"downregulation of L-glutamate uptake","type":"related"},{"name":"inhibition of L-glutamate import","type":"narrow"},{"name":"inhibition of L-glutamate transport","type":"narrow"},{"name":"inhibition of L-glutamate uptake","type":"narrow"},{"name":"negative regulation of L-glutamate import","type":"broad"},{"name":"negative regulation of L-glutamate transport","type":"broad"},{"name":"negative regulation of L-glutamate uptake","type":"related"},{"name":"regulation of L-glutamate import","type":"broad"}],"termid":"GO:0002037"}


id: GO:0004756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + hydrogen selenide = AMP + 3 H+ + phosphate + selenophosphorate.","definition_xrefs":["EC:2.7.9.3","RHEA:18737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"selenide, water dikinase activity","secondary_identifiers":["Reactome:R-HSA-8959510","MetaCyc:2.7.9.3-RXN","UM-BBD_reactionID:r0833","KEGG_REACTION:R03595"],"synonyms":[{"name":"ATP:selenide, water phosphotransferase activity","type":"related"},{"name":"selenide,water dikinase activity","type":"related"},{"name":"selenium donor protein activity","type":"related"},{"name":"selenophosphate synthase activity","type":"exact"},{"name":"selenophosphate synthetase activity","type":"related"}],"termid":"GO:0004756"}


id: MOD:00348
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-carbamoyl-L-alanine.","definition_xrefs":["PubMed:12203680","RESID:AA0343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-aminocarbamoylated residue","termid":"MOD:01679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carbamoyl-L-alanine","synonyms":[{"name":"(S)-2-(carbamoylamino)propanoic acid","type":"exact"},{"name":"2-ureidopropanoic acid","type":"exact"},{"name":"MOD_RES N-carbamoylalanine","type":"exact"},{"name":"N-carbamoyl-L-alanine","type":"exact"},{"name":"N-carbamylalanine","type":"exact"},{"name":"N2CbmAla","type":"exact"}],"termid":"MOD:00348"}


id: GO:0035345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of hypoxanthine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"regulates","term_name":"hypoxanthine transport","termid":"GO:0035344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of hypoxanthine transport","synonyms":[{"name":"regulation of 6-hydroxypurine transport","type":"exact"}],"termid":"GO:0035345"}


id: GO:0051672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the cell wall peptidoglycans of another organism.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of cell wall peptidoglycan in other organism (obsolete GO:0051672)","synonyms":[{"name":"catabolic process of cell wall peptidoglycans of other organism","type":"exact"},{"name":"catabolism of cell wall peptidoglycans of other organism","type":"exact"},{"name":"cell wall catabolic process in other organism","type":"narrow"},{"name":"cell wall catabolism in other organism","type":"narrow"},{"name":"cell wall peptidoglycan catabolic process in another organism","type":"exact"}],"termid":"GO:0051672"}


id: PBO:0090824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Nnk1","termid":"PBO:0090824"}


id: GO:0050967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that contribute to the perception of pain in which an electrical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai","GOC:dos","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of electrical stimulus involved in sensory perception","termid":"GO:0050963"},{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception of pain","termid":"GO:0062149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in sensory perception of pain","synonyms":[{"name":"detection of electrical stimulus during sensory perception of pain","type":"related"},{"name":"perception of pain, detection of electrical stimulus","type":"exact"},{"name":"perception of pain, sensory detection of electrical stimulus","type":"exact"},{"name":"perception of pain, sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory detection of electrical stimulus during perception of pain","type":"related"},{"name":"sensory transduction of electrical stimulus during perception of pain","type":"related"}],"termid":"GO:0050967"}


id: PBO:0000831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PQ loop","termid":"PBO:0000831"}


id: PBO:0029514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_septated_vegetative_cell","termid":"PBO:0029514"}


id: PBO:0079196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 25, pseudogene","termid":"PBO:0079196"}


id: GO:1990362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butan-1-ol + NAD+ = butanal + H+ + NADH.","definition_xrefs":["PMID:1999395","RHEA:33199","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"butanol dehydrogenase (NAD+) activity","synonyms":[{"name":"butanol dehydrogenase activity","type":"broad"}],"termid":"GO:1990362"}


id: GO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in increased metabolic rate in tissues of an organism. It is triggered by the detection of dietary excess. This process is achieved via signaling in the sympathetic nervous system.","definition_xrefs":["PMID:12161655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive thermogenesis","termid":"GO:1990845"},{"relation_name":"part_of","term_name":"response to dietary excess","termid":"GO:0002021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diet induced thermogenesis","termid":"GO:0002024"}


id: PBO:0054966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2380","termid":"PBO:0054966"}


id: GO:0042622
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane surrounding the outer segment of a vertebrate photoreceptor.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary membrane","termid":"GO:0060170"},{"relation_name":"part_of","term_name":"photoreceptor outer segment","termid":"GO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"photoreceptor outer segment membrane","termid":"GO:0042622"}


id: GO:1903527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane tubulation.","definition_xrefs":["GO_REF:0000058","PMID:18388313","GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of membrane tubulation","termid":"GO:1903525"},{"relation_name":"positively_regulates","term_name":"plasma membrane tubulation","termid":"GO:0097320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of membrane tubulation","synonyms":[{"name":"activation of membrane tubulation","type":"narrow"},{"name":"activation of plasma membrane tubulation","type":"narrow"},{"name":"positive regulation of plasma membrane tubulation","type":"exact"},{"name":"up regulation of membrane tubulation","type":"exact"},{"name":"up regulation of plasma membrane tubulation","type":"exact"},{"name":"up-regulation of membrane tubulation","type":"exact"},{"name":"up-regulation of plasma membrane tubulation","type":"exact"},{"name":"upregulation of membrane tubulation","type":"exact"},{"name":"upregulation of plasma membrane tubulation","type":"exact"}],"termid":"GO:1903527"}


id: PBO:0052555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor F2","termid":"PBO:0052555"}


id: GO:0046983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"protein dimerization activity","termid":"GO:0046983"}


id: PBO:0005212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil DNA N-glycosylase Ung1","termid":"PBO:0005212"}


id: PBO:0067054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 75, pseudogene","termid":"PBO:0067054"}


id: PR:Q9HDU9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.06c gene.","definition_xrefs":["UniProtKB:Q9HDU9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB2B2.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.06c","synonyms":[{"name":"Spom972h-SPBPB2B2.06c","type":"exact"}],"termid":"PR:Q9HDU9"}


id: PBO:0042712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin EGF LAG seven-pass G-type receptor 3","termid":"PBO:0042712"}


id: PBO:0004973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 8","termid":"PBO:0004973"}


id: PBO:0040536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 2","termid":"PBO:0040536"}


id: PBO:0013799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sbunit composition, monomeric","termid":"PBO:0013799"}


id: PBO:0036418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC50 domain protein, implicated in signal transduction for invasive growth Ivn1","termid":"PBO:0036418"}


id: SO:0000951
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A signal for RNA polymerase to terminate transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"terminator","termid":"SO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic_terminator","synonyms":[{"name":"eukaryotic terminator","type":"exact"}],"termid":"SO:0000951"}


id: PATO:0002487
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a process by virtue of that process having exactly one organism as a participant.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single organismal process quality","termid":"PATO:0002487"}


id: PBO:0066108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASGRF2 antisense RNA 1","termid":"PBO:0066108"}


id: PBO:0065034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 regulated carcinoma associated Stat3 activating long intergenic non-protein coding transcript","termid":"PBO:0065034"}


id: GO:0097524
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane that is part of a sperm cell.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"sperm plasma membrane","termid":"GO:0097524"}


id: PR:O74914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp3101 gene.","definition_xrefs":["UniProtKB:O74914","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase hsp3101 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.03c","synonyms":[{"name":"Spom972h-hsp3101","type":"exact"},{"name":"glyoxalase 3 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heat shock protein 31 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74914"}


id: GO:1903654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain serine 5 residues that is involved in positive regulation of transcription elongation from RNA polymerase II promoter.","definition_xrefs":["PMID:19328067","GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter (obsolete GO:1903654)","termid":"GO:1903654"}


id: GO:0060646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell of the mammary placode becomes an internal epithelial cell of the mammary gland bud. Internal cells are small and of irregular shape.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in mammary gland bud morphogenesis","termid":"GO:0060643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"internal mammary gland bud epithelial cell differentiation","termid":"GO:0060646"}


id: PBO:0081198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger imprinted 3","termid":"PBO:0081198"}


id: PBO:0109283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRXN1 divergent transcript","termid":"PBO:0109283"}


id: GO:0071677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of mononuclear cell migration. Mononuclear cell migration is the movement of a mononuclear cell within or between different tissues and organs of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte migration","termid":"GO:0002687"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"positively_regulates","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mononuclear cell migration","synonyms":[{"name":"activation of mononuclear cell migration","type":"narrow"},{"name":"stimulation of mononuclear cell migration","type":"narrow"},{"name":"up regulation of mononuclear cell migration","type":"exact"},{"name":"up-regulation of mononuclear cell migration","type":"exact"},{"name":"upregulation of mononuclear cell migration","type":"exact"}],"termid":"GO:0071677"}


id: PBO:0039552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 46","termid":"PBO:0039552"}


id: PBO:0039734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOC4-APOC2 readthrough (NMD candidate)","termid":"PBO:0039734"}


id: internal:narrow
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narrow","termid":"internal:narrow"}


id: PR:Q10184
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3F10.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.09","synonyms":[{"name":"5-proFAR isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC3F10.09","type":"exact"},{"name":"phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10184"}


id: GO:0017147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Wnt-protein, a secreted growth factor involved in signaling.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"Wnt-protein binding","termid":"GO:0017147"}


id: GO:0005868
data:
  {"annotated_genes":["SJAG_02561","SJAG_02286","SJAG_01662","SJAG_01370","SJAG_00113"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83888,87090,93679,96820,107487],"is_not":false,"summary":null,"term":"GO:0005868"}]},"cv_name":"cellular_component","definition":"Any dynein complex with a homodimeric dynein heavy chain core that catalyzes movement along a microtubule. Cytoplasmic dynein complexes participate in many cytoplasmic transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Some complexes participate in intraflagellar transport. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes, and may include light chains and light intermediate chains.","definition_xrefs":["PMID:12600311","GOC:mah","GOC:cilia","GOC:krc","GOC:hla"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dynein complex","termid":"GO:0030286"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_01370":null,"SJAG_01662":null,"SJAG_02286":null,"SJAG_02561":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0032991"],"is_obsolete":false,"name":"cytoplasmic dynein complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic dynein heavy chain","type":"narrow"},{"name":"cytoplasmic dynein intermediate chain","type":"narrow"},{"name":"cytoplasmic dynein intermediate light chain","type":"narrow"},{"name":"cytoplasmic dynein light chain","type":"narrow"}],"termid":"GO:0005868","terms_by_termid":{"GO:0005868":null}}


id: PBO:0048786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha 15","termid":"PBO:0048786"}


id: GO:0044470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction in the frequency, rate or extent of blood coagulation in the bitten organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of blood coagulation in another organism","termid":"GO:0044468"},{"relation_name":"is_a","term_name":"envenomation resulting in impairment of hemostasis in another organism","termid":"GO:0044483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of blood coagulation in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0044470"}


id: GO:1905576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ganglioside GT1b.","definition_xrefs":["PMID:1454804","GOC:TermGenie","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"ganglioside binding","termid":"GO:0035594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"ganglioside GT1b binding","termid":"GO:1905576"}


id: GO:2001087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a sophoroseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sophorose transport","termid":"GO:2001087"}


id: SO:0001343
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_7_2prirme_O_trimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_7_2prirme_O_trimethylguanosine","secondary_identifiers":["RNAMOD:106"],"synonyms":[{"name":"N2 7 2prirme O trimethylguanosine","type":"exact"},{"name":"N2,7,2'-O-trimethylguanosine","type":"exact"},{"name":"m2,7Gm","type":"exact"}],"termid":"SO:0001343"}


id: PBO:0060380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin regulatory factor like","termid":"PBO:0060380"}


id: GO:0090500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an endocardial cushion cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"}


id: PBO:0067565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 718, pseudogene","termid":"PBO:0067565"}


id: PBO:0060989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-homologous end joining factor 1","termid":"PBO:0060989"}


id: PBO:0066157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP8 N-terminal like","termid":"PBO:0066157"}


id: GO:0046727
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the protein subunits that comprise the closed shell or coat (capsid) of certain viruses.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"capsomere","secondary_identifiers":["Wikipedia:Capsomere"],"synonyms":[{"name":"capsomer","type":"exact"}],"termid":"GO:0046727"}


id: PBO:0071387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 10","termid":"PBO:0071387"}


id: PR:Q10072
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H1.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C3H1.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.06c","synonyms":[{"name":"Spom972h-SPAC3H1.06c","type":"exact"}],"termid":"PR:Q10072"}


id: PBO:0082087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase; synthesizes PRPP, which is required for nucleotide, histidine, and tryptophan biosynthesis; plays a key role in cell wall integrity (CWI) pathway; one of five related enzymes, which are active as heteromultimeric complexes; missense mutations in human homolog PRPS1 are associated with neuropathic Arts syndrome and Charcot-Marie Tooth (CMTX5) disease","termid":"PBO:0082087"}


id: PBO:0085763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase of unknown cellular role; binds phosphatidylinositols and cardiolipin in a large-scale study","termid":"PBO:0085763"}


id: PBO:0044722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 9 (pseudogene)","termid":"PBO:0044722"}


id: MOD:01798
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal 3'-phosphohistidine residue to 3'-phosphohistidine immonium ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"3'-phospho-L-histidine","termid":"MOD:00045"},{"relation_name":"is_a","term_name":"phosphohistidine immonium ion","termid":"MOD:01791"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphohistidine immonium ion","synonyms":[{"name":"2-(1-phosphono-1H-imidazol-5-yl)ethaniminium","type":"exact"},{"name":"Npi-phosphorylated L-histidine","type":"exact"}],"termid":"MOD:01798"}


id: PBO:0081245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 16","termid":"PBO:0081245"}


id: PBO:0083974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-repressible ADP-ribosylation factor; GTPase of Ras superfamily involved in regulating cell polarity and invasive growth; localizes to dynamic spots at plasma membrane and modulates PtdIns(4,5)P2 levels to facilitate endocytosis; required for localization of endocytic protein Lsb5p to correct cortical site in cells; also has mRNA binding activity; homolog of mammalian Arf6","termid":"PBO:0083974"}


id: PBO:0030017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_division_site","termid":"PBO:0030017"}


id: GO:0004796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = thromboxane A(2).","definition_xrefs":["EC:5.3.99.5","RHEA:17137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"thromboxane-A synthase activity","secondary_identifiers":["KEGG_REACTION:R02268","MetaCyc:THROMBOXANE-A-SYNTHASE-RXN","GO:0008400","Reactome:R-HSA-5603275","Reactome:R-HSA-76500"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate isomerase activity","type":"related"},{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate thromboxane-A2-isomerase activity","type":"related"},{"name":"cytochrome P450 CYP5","type":"narrow"},{"name":"thromboxane synthase activity","type":"related"},{"name":"thromboxane synthetase activity","type":"related"}],"termid":"GO:0004796"}


id: PBO:0091154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase","termid":"PBO:0091154"}


id: PBO:0083005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Daughter cell-specific protein; may regulate cross-talk between the mating and filamentation pathways; deletion affects cell separation after division and sensitivity to alpha-factor and drugs affecting the cell wall; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0083005"}


id: GO:1990692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a trans-Golgi-derived vesicle to the lipid bilayer membrane around the medial-Golgi cisterna. Such vesicles include COPI-coated transport vesicles involved in retrograde transport.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"},{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"},{"relation_name":"part_of","term_name":"retrograde transport, vesicle recycling within Golgi","termid":"GO:0000301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"trans-Golgi-derived vesicle fusion with Golgi medial cisterna membrane","synonyms":[{"name":"trans-Golgi-derived vesicle fusion with medial-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990692"}


id: PBO:0013451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YOR074C qualifier=SPAC15E1.04,C-term","termid":"PBO:0013451"}


id: GO:2000135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of regulation of secondary heart field cardioblast proliferation.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of regulation of secondary heart field cardioblast proliferation (obsolete GO:2000135)","synonyms":[{"name":"positive regulation of regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"positive regulation of regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:2000135"}


id: FYPO:0001486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to salt stress is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during cellular response to osmotic stress","termid":"FYPO:0003793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during cellular response to salt stress","synonyms":[{"name":"normal RNA accumulation during cellular response to salt stress","type":"related"},{"name":"normal RNA level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to salt stress","type":"narrow"},{"name":"normal transcript level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001486"}


id: PR:O60141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 94 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein saf4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.10c","secondary_identifiers":["UniProtKB:O60141"],"synonyms":[{"name":"Spom972h-CCDC94","type":"exact"}],"termid":"PR:O60141"}


id: PBO:0030028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_adenylyl_cyclase_activity","termid":"PBO:0030028"}


id: PBO:0062786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 1","termid":"PBO:0062786"}


id: PBO:0058425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4795","termid":"PBO:0058425"}


id: PBO:0084185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone demethylase and transcription factor; regulates genes during nutrient limitation; activity modulated by proteasome-mediated proteolysis; has JmjC and JmjN domain in N-terminus that interact, promoting stability and proper transcriptional activity; contains two transactivating domains downstream of Jmj domains and a C-terminal DNA binding domain; relocalizes to the cytosol in response to hypoxia; GIS1 has a paralog, RPH1, that arose from the whole genome duplication","termid":"PBO:0084185"}


id: GO:0034499
data:
  {"annotated_genes":["SJAG_00314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108552],"is_not":false,"summary":null,"term":"GO:0034499"}]},"cv_name":"biological_process","definition":"The directed movement of substances from late endosomes to the Golgi.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"late endosome to Golgi transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PVE to Golgi transport","type":"exact"},{"name":"prevacuolar endosome to Golgi transport","type":"exact"}],"termid":"GO:0034499","terms_by_termid":{"GO:0034499":null}}


id: PBO:0040620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRAF-activated non-protein coding RNA","termid":"PBO:0040620"}


id: PBO:0053695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 895","termid":"PBO:0053695"}


id: PR:Q9P7D7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional protein aas that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid--CoA ligase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.11c","secondary_identifiers":["UniProtKB:Q9P7D7"],"synonyms":[{"name":"SPBP4H10.11c","type":"related"},{"name":"Spom972h-aas","type":"exact"},{"name":"fatty acid activator 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"long-chain acyl-CoA synthetase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7D7"}


id: PBO:0069380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 640, pseudogene","termid":"PBO:0069380"}


id: PBO:0055415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2845","termid":"PBO:0055415"}


id: PBO:0083693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme that catalyzes the fourth step in the histidine pathway; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; mutations cause histidine auxotrophy and sensitivity to Cu, Co, and Ni salts","termid":"PBO:0083693"}


id: FYPO:0002379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with abnormal germ tube morphology","termid":"FYPO:0000313"},{"relation_name":"is_a","term_name":"inviable after spore germination with elongated germ tube","termid":"FYPO:0000314"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, elongated cell","termid":"FYPO:0004603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with elongated germ tube","synonyms":[{"name":"inviable germinated spore, without cell division, with elongated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with elongated germ tube","type":"exact"}],"termid":"FYPO:0002379"}


id: GO:0085009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via Maurer's cleft. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by symbiont secreted substance released from Maurer's cleft (obsolete GO:0085009)","synonyms":[{"name":"interaction with host mediated by symbiont secreted substance released from Maurers cleft","type":"exact"}],"termid":"GO:0085009"}


id: PBO:0056053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like 3 pre-mRNA splicing factor","termid":"PBO:0056053"}


id: PATO:0000515
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A resistance quality inhering in a bearer by virtue of its disposition to endure or being insensitive to a stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to","termid":"PATO:0001046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tolerant to","synonyms":[{"name":"tolerant","type":"exact"}],"termid":"PATO:0000515"}


id: PBO:0030225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_tacrolimus_during_salt_stress","termid":"PBO:0030225"}


id: GO:0000736
data:
  {"annotated_genes":["SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114818],"is_not":false,"summary":null,"term":"GO:0000736"}]},"cv_name":"biological_process","definition":"During DSBR via single-strand annealing, the removal of nonhomologous sequences at the broken 3' single-strand DNA end before DNA repair synthesis can occur.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"removal of nonhomologous ends","termid":"GO:0000735"},{"relation_name":"part_of","term_name":"double-strand break repair via single-strand annealing","termid":"GO:0045002"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"double-strand break repair via single-strand annealing, removal of nonhomologous ends","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000736","terms_by_termid":{"GO:0000736":null}}


id: PR:P87167
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- but2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uba3-binding protein but2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.02","synonyms":[{"name":"Spom972h-but2","type":"exact"}],"termid":"PR:P87167"}


id: PBO:0090804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 (UBR family) Ubr11","termid":"PBO:0090804"}


id: PBO:0090017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk22","termid":"PBO:0090017"}


id: PBO:0086039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in actin patch formation; null mutant displays a decreased number of actin cortical patches, increased coat patches, altered patch formation dynamics, and defects in endocytic internalization; interacts with GID complex components and computationally predicted to be involved in fructose-1,6-bisphosphatase (Fbp1p) degradation; non-essential gene","termid":"PBO:0086039"}


id: PBO:0004401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex non-SMC subunit Cnd1","termid":"PBO:0004401"}


id: PBO:0062412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 39 pseudogene","termid":"PBO:0062412"}


id: PBO:0078210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-3","termid":"PBO:0078210"}


id: PATO:0001925
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface shape quality inhering in a bearer by virtue of the bearer's shape of features present on its surface or outer shell.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surface feature shape","termid":"PATO:0001925"}


id: GO:0075270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of aecium development, a process in which a cuplike structure containing chains of aeciospores is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of aecium development","termid":"GO:0075268"},{"relation_name":"negatively_regulates","term_name":"aecium development","termid":"GO:0075267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aecium development","termid":"GO:0075270"}


id: PBO:0042659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 8","termid":"PBO:0042659"}


id: PR:000037031
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein rho3 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PRO:DAN","PMID:24947517","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding protein rho3 (Schizosaccharomyces pombe)","termid":"PR:000037030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho3/GTP+","pombase_gene_id":"SPAC23C4.08","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein rho3, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rho3/GTP+","type":"exact"},{"name":"rho3/GTP+","type":"exact"}],"termid":"PR:000037031"}


id: GO:1902319
data:
  {"annotated_genes":["SJAG_04879","SJAG_02818","SJAG_04190","SJAG_00863","SJAG_00874","SJAG_02667","SJAG_03495","SJAG_05197","SJAG_01762","SJAG_01823","SJAG_04210","SJAG_00814","SJAG_00729","SJAG_00884","SJAG_00272","SJAG_01010","SJAG_04877","SJAG_02908","SJAG_02182","SJAG_02199","SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91160,106037,103440,91371,111362,103337,111487,108609,90064,98926,101009,109254,85694,109661,91338,105201,111192,108369,100323,103072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902983"},{"annotations":[98928,91340,101011,100327,114244,105203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[85695,91341,91372,100328,103073,90066,103442,101012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"}]},"cv_name":"biological_process","definition":"Any DNA strand elongation that is involved in nuclear cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in cell cycle DNA replication","termid":"GO:1902296"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01010":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"DNA strand elongation involved in nuclear cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA strand elongation involved in DNA replication during S phase","type":"related"},{"name":"DNA strand elongation involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA strand elongation involved in DNA replication involved in S-phase","type":"exact"}],"termid":"GO:1902319","terms_by_termid":{"GO:1902983":null,"GO:1903459":null,"GO:1903460":null}}


id: PBO:0034108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_subsequence","termid":"PBO:0034108"}


id: PBO:0029716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_DNA_replication_during_vegetative_growth","termid":"PBO:0029716"}


id: PBO:0070081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 38, pseudogene","termid":"PBO:0070081"}


id: PBO:0011988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YPR127W date=19700101","termid":"PBO:0011988"}


id: GO:0141114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process by which a symbiont inhibits or disrupts the normal execution of the activation of complement in its host.","definition_xrefs":["PMID:20194595","PMID:25830295"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host complement activation (obsolete GO:0141114)","synonyms":[{"name":"suppression of complement activation by another organism","type":"broad"}],"termid":"GO:0141114"}


id: PBO:0068554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 5, pseudogene","termid":"PBO:0068554"}


id: PBO:0060147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mtr4 exosome RNA helicase","termid":"PBO:0060147"}


id: PBO:0047446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIb","termid":"PBO:0047446"}


id: PBO:0108966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule associated protein 1C","termid":"PBO:0108966"}


id: GO:1904202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of iodide transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20392814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic anion transport","termid":"GO:1903792"},{"relation_name":"is_a","term_name":"regulation of iodide transport","termid":"GO:1904201"},{"relation_name":"negatively_regulates","term_name":"iodide transport","termid":"GO:0015705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of iodide transport","synonyms":[{"name":"down regulation of iodide transport","type":"exact"},{"name":"down-regulation of iodide transport","type":"exact"},{"name":"downregulation of iodide transport","type":"exact"},{"name":"inhibition of iodide transport","type":"narrow"}],"termid":"GO:1904202"}


id: PBO:0065159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 9","termid":"PBO:0065159"}


id: PBO:0111536
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSF-Responsive amino acid Gene","termid":"PBO:0111536"}


id: PBO:0070713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 18","termid":"PBO:0070713"}


id: PBO:0080763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked inhibitor of apoptosis pseudogene 2","termid":"PBO:0080763"}


id: GO:0031865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP2 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"EP2 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP2 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP2 receptor binding","type":"exact"}],"termid":"GO:0031865"}


id: PBO:0080175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 10","termid":"PBO:0080175"}


id: PBO:0076555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tax1 binding protein 3","termid":"PBO:0076555"}


id: _global:temporally_related_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporally_related_to","secondary_identifiers":["RO:0002222"],"termid":"_global:temporally_related_to"}


id: SO:0000903
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Endogenous DNA sequence that are likely to have arisen from retroviruses.","direct_ancestors":[{"relation_name":"is_a","term_name":"proviral_location","termid":"SO:0000751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous_retroviral_sequence","synonyms":[{"name":"endogenous retroviral sequence","type":"exact"}],"termid":"SO:0000903"}


id: PBO:0018118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP14 microtubule-associated protein Dis1","termid":"PBO:0018118"}


id: GO:0009949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the establishment of polarity along the anterior/posterior axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"anterior/posterior axis specification","termid":"GO:0009948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polarity specification of anterior/posterior axis","termid":"GO:0009949"}


id: PBO:0062620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily Z member 1","termid":"PBO:0062620"}


id: GO:0001626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the peptide nociceptin, and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["GOC:bf","GOC:mah","PMID:18670432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"},{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"nociceptin receptor activity","synonyms":[{"name":"OFQ receptor activity","type":"exact"},{"name":"ORPH receptor","type":"exact"},{"name":"X-opioid receptor activity","type":"related"},{"name":"nociceptin/orphanin-FQ receptor activity","type":"exact"},{"name":"orphanin-FQ receptor activity","type":"exact"}],"termid":"GO:0001626"}


id: PBO:0084372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipoate-protein ligase; octanoyl-CoA: protein transferase required along with Lip2 and Lip5 for lipoylation of Lat1p and Kgd2p; similar to E. coli LplA; null mutant displays reduced frequency of mitochondrial genome loss","termid":"PBO:0084372"}


id: GO:0001830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become trophectoderm cells.","definition_xrefs":["ISBN:0198542771","GOC:dph","ISBN:0124020607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"trophectodermal cell differentiation","termid":"GO:0001829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cell fate commitment","synonyms":[{"name":"trophectoderm cell fate commitment","type":"exact"}],"termid":"GO:0001830"}


id: PBO:0079031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-4","termid":"PBO:0079031"}


id: PBO:0076852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymocyte expressed, positive selection associated 1","termid":"PBO:0076852"}


id: SO:0000456
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is recombinationally rearranged.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"recombinationally_rearranged","termid":"SO:0000940"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombinationally_rearranged_gene","synonyms":[{"name":"recombinationally rearranged gene","type":"exact"}],"termid":"SO:0000456"}


id: PBO:0083760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential Hsp90p co-chaperone; necessary for passage through the START phase of the cell cycle; stabilizes protein kinase nascent chains and participates along with Hsp90p in their folding","termid":"PBO:0083760"}


id: PBO:0065697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio RNA binding family member 2","termid":"PBO:0065697"}


id: PBO:0027739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip_during_cellular_response_to_salt_stress","termid":"PBO:0027739"}


id: FYPO:0004685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to radicicol. Cells stop growing (and may die) at a concentration of radicicol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to radicicol","synonyms":[{"name":"hypersensitive to radicicol","type":"exact"},{"name":"sensitive to radicicol during mitotic cell cycle","type":"related"},{"name":"sensitive to radicicol during vegetative growth","type":"exact"}],"termid":"FYPO:0004685"}


id: PBO:0091839
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"do not confuse with Sty1","termid":"PBO:0091839"}


id: GO:0034770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by addition of one or more methyl groups to lysine at position 20 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K20 methylation (obsolete GO:0034770)","synonyms":[{"name":"histone H4 K20 methylation","type":"exact"},{"name":"histone H4K20me","type":"exact"},{"name":"histone lysine H4 K20 methylation","type":"exact"}],"termid":"GO:0034770"}


id: PBO:0005673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricase (predicted)","termid":"PBO:0005673"}


id: GO:0018519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-1,2-dihydro-3-ethylcatechol + NAD+ = 3-ethylcatechol + H+ + NADH.","definition_xrefs":["RHEA:18101","EC:1.3.1.66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cis-dihydroethylcatechol dehydrogenase activity","secondary_identifiers":["MetaCyc:1.3.1.66-RXN","UM-BBD_reactionID:r0309","KEGG_REACTION:R05313"],"synonyms":[{"name":"cis-1,2-dihydro-3-ethylcatechol:NAD+ oxidoreductase activity","type":"related"},{"name":"cis-ethylbenzene glycol dehydrogenase activity","type":"exact"}],"termid":"GO:0018519"}


id: GO:0005313
data:
  {"annotated_genes":["SJAG_00522","SJAG_00626","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92670,94333,99944],"is_not":false,"summary":null,"term":"GO:0005313"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-glutamate from one side of a membrane to the other. L-glutamate is the anion of 2-aminopentanedioic acid.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acidic amino acid transmembrane transporter activity","termid":"GO:0015172"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00626":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-glutamate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5624256","RHEA:66336","Reactome:R-HSA-210444","Reactome:R-HSA-428052"],"synonyms":[{"name":"L-glutamate transporter activity","type":"broad"},{"name":"glutamate transmembrane transporter activity","type":"broad"},{"name":"glutamate/aspartate porter activity","type":"narrow"},{"name":"glutamate/aspartate:sodium symporter activity","type":"narrow"}],"termid":"GO:0005313","terms_by_termid":{"GO:0005313":null}}


id: PBO:0080817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 2","termid":"PBO:0080817"}


id: PR:Q9P7K5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- git1 gene.","definition_xrefs":["UniProtKB:Q9P7K5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase activation protein git1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.20c","synonyms":[{"name":"Spom972h-git1","type":"exact"},{"name":"glucose-insensitive transcription protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7K5"}


id: PBO:0110471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COA1 pseudogene 1","termid":"PBO:0110471"}


id: GO:0019990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pteridine, pyrazino(2,3-dipyrimidine), the parent structure of pterins and the pteroyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine metabolic process","termid":"GO:0019889"},{"relation_name":"is_a","term_name":"pteridine-containing compound catabolic process","termid":"GO:0042560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pteridine catabolic process","synonyms":[{"name":"pteridine breakdown","type":"exact"},{"name":"pteridine catabolism","type":"exact"},{"name":"pteridine degradation","type":"exact"}],"termid":"GO:0019990"}


id: GO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the transition from the initiation to the elongation phases of transcription by a DNA-dependent RNA polymerase, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase and making contacts with elongation specific factors.","definition_xrefs":["PMID:18280161","PMID:15020047","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"promoter clearance during DNA-templated transcription","secondary_identifiers":["GO:0001122"],"synonyms":[{"name":"promoter clearance during DNA-dependent transcription","type":"exact"},{"name":"promoter clearance from bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"promoter escape","type":"broad"}],"termid":"GO:0001109"}


id: PBO:0083816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of inner ring of nuclear pore complex (NPC); plays a role in modulating transport through the NPC; homologous to human NUP205","termid":"PBO:0083816"}


id: PBO:0051099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-2","termid":"PBO:0051099"}


id: FYPO:0006699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynylcysteine sulfoxide measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular hercynylcysteine sulfoxide level during vegetative growth","synonyms":[{"name":"decreased cellular hercynylcysteine sulfoxide level during mitotic cell cycle","type":"related"},{"name":"decreased cellular hercynylcysteine sulphoxide level during vegetative growth","type":"exact"},{"name":"decreased hercynylcysteine sulfoxide level during vegetative growth","type":"exact"},{"name":"reduced cellular hercynylcysteine sulfoxide level during vegetative growth","type":"exact"}],"termid":"FYPO:0006699"}


id: GO:0000732
data:
  {"annotated_genes":["SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96739],"is_not":false,"summary":null,"term":"GO:0000732"},{"annotations":[96741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"The rejection of the broken 3' single-strand DNA molecule that formed heteroduplex DNA with its complement in an intact duplex DNA. The Watson-Crick base pairing in the original duplex is restored. The rejected 3' single-strand DNA molecule reanneals with its original complement to reform two intact duplex molecules.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"DNA strand displacement","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-loop dissociation","type":"related"},{"name":"D-loop processing","type":"related"},{"name":"displacement loop dissociation","type":"related"},{"name":"displacement loop processing","type":"related"},{"name":"strand displacement","type":"exact"}],"termid":"GO:0000732","terms_by_termid":{"GO:0000732":null,"GO:1902346":null}}


id: GO:1901805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-glucoside.","definition_xrefs":["PMID:16390337","PMID:8990303","GOC:yaf","GOC:TermGenie","PMID:15205427","Unipathway:UPA00237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-glucoside catabolic process","synonyms":[{"name":"beta-glucoside breakdown","type":"exact"},{"name":"beta-glucoside catabolism","type":"exact"},{"name":"beta-glucoside degradation","type":"exact"}],"termid":"GO:1901805"}


id: PBO:0086583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; detected in highly purified mitochondria in high-throughput studies; proposed to be involved in resistance to mechlorethamine and streptozotocin; null mutant sensitive to expression of top1-T722A allele","termid":"PBO:0086583"}


id: PBO:0012582
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell Wall Lysis","termid":"PBO:0012582"}


id: PBO:0089055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Adn2","termid":"PBO:0089055"}


id: PBO:0112000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh5","termid":"PBO:0112000"}


id: SO:0001811
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post-translationally modified region in which residues of the protein are modified by phosphorylation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post_translationally_modified_region","termid":"SO:0001089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"phosphorylation_site","synonyms":[{"name":"phosphorylation site","type":"exact"}],"termid":"SO:0001811"}


id: PBO:0067242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 314, pseudogene","termid":"PBO:0067242"}


id: PBO:0080252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 15 pseudogene","termid":"PBO:0080252"}


id: GO:0001117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a protein-DNA-RNA complex into its constituent components.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex organization","termid":"GO:0001115"},{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA-RNA complex disassembly","termid":"GO:0001117"}


id: PBO:0025496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-N ortholog Mis15","termid":"PBO:0025496"}


id: PBO:0031298
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_disassembly","termid":"PBO:0031298"}


id: PBO:0070530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 29","termid":"PBO:0070530"}


id: PBO:0048330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 41","termid":"PBO:0048330"}


id: PBO:0079943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USH2A antisense RNA 2","termid":"PBO:0079943"}


id: FYPO:0005107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of mitotic DNA replication initiation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"},{"relation_name":"is_a","term_name":"normal regulation of DNA replication","termid":"FYPO:0002995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal regulation of mitotic DNA replication initiation","synonyms":[{"name":"normal regulation of DNA replication initiation during mitotic cell cycle","type":"exact"},{"name":"normal regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"normal regulation of mitotic DNA replication initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0005107"}


id: PR:O14329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zrg17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc transporter zrg17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.14c","synonyms":[{"name":"Spom972h-zrg17","type":"exact"}],"termid":"PR:O14329"}


id: PBO:0052100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A member 3","termid":"PBO:0052100"}


id: PBO:0069391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 651, pseudogene","termid":"PBO:0069391"}


id: PBO:0079983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 21","termid":"PBO:0079983"}


id: PR:Q10225
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ankyrin repeat and BTB/POZ domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D6.04c","secondary_identifiers":["UniProtKB:Q10225"],"synonyms":[{"name":"Spom972h-ABTB1","type":"exact"}],"termid":"PR:Q10225"}


id: PBO:0087042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L1B; N-terminally acetylated; homologous to mammalian ribosomal protein L10A and bacterial L1; RPL1B has a paralog, RPL1A, that arose from the whole genome duplication; rpl1a rpl1b double null mutation is lethal; ribosomes containing Rpl1b are more efficient in translation of respiration-related proteins","termid":"PBO:0087042"}


id: GO:0009062
data:
  {"annotated_genes":["SJAG_00706","SJAG_04570","SJAG_00413","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87561],"is_not":false,"summary":null,"term":"GO:0009062"},{"annotations":[107924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[102613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[109857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"cellular lipid catabolic process","termid":"GO:0044242"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00706":null,"SJAG_02763":null,"SJAG_04570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fatty acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Fatty_acid_degradation"],"synonyms":[{"name":"fatty acid breakdown","type":"exact"},{"name":"fatty acid catabolism","type":"exact"},{"name":"fatty acid degradation","type":"exact"}],"termid":"GO:0009062","terms_by_termid":{"GO:0001561":null,"GO:0006635":null,"GO:0009062":null,"GO:0042758":null}}


id: PBO:0043440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2","termid":"PBO:0043440"}


id: PBO:0079951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 4","termid":"PBO:0079951"}


id: PBO:0063272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 18 pseudogene","termid":"PBO:0063272"}


id: GO:0098669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a preexisting viral infection prevents a secondary infection with the same or a closely related virus. Typically some aspect of viral entry is inhibited, but post entry mechanisms have also been documented.","definition_xrefs":["VZ:3971","PMID:8012757","PMID:11985726","PMID:23692331","PMID:24089557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superinfection exclusion","termid":"GO:0098669"}


id: PBO:0068811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 48, pseudogene","termid":"PBO:0068811"}


id: PBO:0080786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 6","termid":"PBO:0080786"}


id: GO:0033606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a chemokine receptor within a lipid bilayer.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport within lipid bilayer","termid":"GO:0032594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"chemokine receptor transport within lipid bilayer","synonyms":[{"name":"chemokine receptor translocation within membrane","type":"exact"}],"termid":"GO:0033606"}


id: PBO:0029697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_vegetative_cell,_septa_grouped","termid":"PBO:0029697"}


id: PBO:0056248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male germ cell associated kinase","termid":"PBO:0056248"}


id: GO:0007581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:sgd_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent yeast cell size increase (obsolete GO:0007581)","synonyms":[{"name":"age-dependent yeast cell size increase","type":"exact"}],"termid":"GO:0007581"}


id: PBO:0065335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 59, pseudogene","termid":"PBO:0065335"}


id: GO:1902090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumagillin biosynthetic process.","definition_xrefs":["PMID:23488861","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"fumagillin biosynthetic process","termid":"GO:1902086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of fumagillin biosynthetic process","synonyms":[{"name":"regulation of fumagillin anabolism","type":"exact"},{"name":"regulation of fumagillin biosynthesis","type":"exact"},{"name":"regulation of fumagillin formation","type":"exact"},{"name":"regulation of fumagillin synthesis","type":"exact"}],"termid":"GO:1902090"}


id: PBO:0042663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 19","termid":"PBO:0042663"}


id: GO:0014014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gliogenesis, the formation of mature glia.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gliogenesis","termid":"GO:0014013"},{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"},{"relation_name":"negatively_regulates","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of gliogenesis","synonyms":[{"name":"down regulation of gliogenesis","type":"exact"},{"name":"down-regulation of gliogenesis","type":"exact"},{"name":"downregulation of gliogenesis","type":"exact"},{"name":"inhibition of gliogenesis","type":"narrow"}],"termid":"GO:0014014"}


id: PBO:0005343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease accessory protein UREG (predicted)","termid":"PBO:0005343"}


id: GO:0018562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,4-dihydroxyfluorene + O2 = 2-hydroxy-4-(1-oxo-1,3-dihydro-2H-inden-2-ylidene) but-2-enoic acid.","definition_xrefs":["UM-BBD_reactionID:r0415"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,4-dihydroxyfluorene 4,4-alpha-dioxygenase activity (obsolete GO:0018562)","termid":"GO:0018562"}


id: PBO:0048319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 30","termid":"PBO:0048319"}


id: PBO:0112956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI anchored cell surface receptor L domain-like Ecm33","termid":"PBO:0112956"}


id: PBO:0043811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPNE2 divergent transcript","termid":"PBO:0043811"}


id: PBO:0029339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_mitochondrial_tRNA_processing_intermediates_with_3'_extensions","termid":"PBO:0029339"}


id: GO:0046205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nor-spermidine, a compound related to spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"nor-spermidine metabolic process","termid":"GO:0046204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nor-spermidine catabolic process","synonyms":[{"name":"nor-spermidine breakdown","type":"exact"},{"name":"nor-spermidine catabolism","type":"exact"},{"name":"nor-spermidine degradation","type":"exact"}],"termid":"GO:0046205"}


id: PBO:0044115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen 1B","termid":"PBO:0044115"}


id: GO:0060384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a nerve invades a tissue and makes functional synaptic connection within the tissue.","definition_xrefs":["GOC:sart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"nerve development","termid":"GO:0021675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innervation","termid":"GO:0060384"}


id: GO:0010593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lamellipodium assembly","termid":"GO:0010591"},{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"negative regulation of lamellipodium organization","termid":"GO:1902744"},{"relation_name":"negatively_regulates","term_name":"lamellipodium assembly","termid":"GO:0030032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of lamellipodium assembly","synonyms":[{"name":"negative regulation of lamellipodium biogenesis","type":"related"}],"termid":"GO:0010593"}


id: FYPO:0000341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a single functional copy of a gene provides sufficient normal function in a diploid cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"haplosufficient","synonyms":[{"name":"haplosufficient during mitotic cell cycle","type":"related"},{"name":"haplosufficient during vegetative growth","type":"exact"}],"termid":"FYPO:0000341"}


id: PBO:0057237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 424","termid":"PBO:0057237"}


id: FYPO:0003119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyadenylated messenger RNA (mRNA) measured in the nucleus is higher than normal. Total mRNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nuclear RNA level during vegetative growth","termid":"FYPO:0000911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0002403"],"is_obsolete":false,"name":"increased nuclear polyadenylated mRNA level during vegetative growth","synonyms":[{"name":"increased nuclear poly(A)+ mRNA level during vegetative growth","type":"exact"},{"name":"increased nuclear polyadenylated mRNA accumulation during vegetative growth","type":"related"},{"name":"increased nuclear polyadenylated mRNA level during mitotic cell cycle","type":"related"},{"name":"increased nuclear polyadenylated mRNA transcript level during vegetative growth","type":"exact"},{"name":"increased nuclear polyadenylated messenger RNA level during vegetative growth","type":"exact"},{"name":"nuclear poly(A)+ mRNA accumulation","type":"related"},{"name":"nuclear poly-A mRNA accumulation","type":"related"}],"termid":"FYPO:0003119"}


id: PBO:0053963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1271","termid":"PBO:0053963"}


id: GO:0033881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxycholoyl-CoA + cholate = deoxycholate + choloyl-CoA.","definition_xrefs":["PMID:22021638","RHEA:49436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"bile-acid-CoA transferase activity","secondary_identifiers":["KEGG_REACTION:R07295","EC:2.8.3.25"],"synonyms":[{"name":"bile-acid-CoA hydrolase activity","type":"related"},{"name":"deoxycholoyl-CoA transferase activity","type":"related"}],"termid":"GO:0033881"}


id: PBO:0050769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIV-1 Tat interactive protein 2","termid":"PBO:0050769"}


id: PBO:0044809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 106B","termid":"PBO:0044809"}


id: PBO:0001546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA primase catalytic subunit Spp1","termid":"PBO:0001546"}


id: FYPO:0002490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that has a greater length, diameter, and volume than normal, and undergoes two or more rounds of cell division and then dies. The ratio between cell length and diameter remains normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, abnormal morphology","termid":"FYPO:0002148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, swollen cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, enlarged cell","type":"related"},{"name":"inviable after spore germination, multiple cell divisions, increased cell size","type":"related"},{"name":"inviable after spore germination, multiple cell divisions, increased cell volume","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, large cell","type":"related"},{"name":"inviable following spore germination, multiple cell divisions, swollen cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, swollen cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, swollen cell","type":"exact"}],"termid":"FYPO:0002490"}


id: PR:O94279
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A magnesium-dependent phosphatase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium-dependent phosphatase P8B7.31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.31","secondary_identifiers":["UniProtKB:O94279"],"synonyms":[{"name":"Spom972h-MDP1","type":"exact"}],"termid":"PR:O94279"}


id: PBO:0059830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription termination factor 4","termid":"PBO:0059830"}


id: GO:0071384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosteroid hormone stimulus. A corticosteroid is a steroid hormone that is produced in the adrenal cortex. Corticosteroids are involved in a wide range of physiologic systems such as stress response, immune response and regulation of inflammation, carbohydrate metabolism, protein catabolism, blood electrolyte levels, and behavior. They include glucocorticoids and mineralocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to corticosteroid","termid":"GO:0031960"},{"relation_name":"is_a","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to corticosteroid stimulus","termid":"GO:0071384"}


id: PR:O94303
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- his4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazole glycerol phosphate synthase hisHF (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC418.01c","synonyms":[{"name":"IGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IGPS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ImGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-his4","type":"exact"}],"termid":"PR:O94303"}


id: FYPO:0008248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from long terminal repeat elements (LTRs) measured in a cell is lower than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased LTR-derived RNA level","termid":"FYPO:0008248"}


id: PBO:0087673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Lst4p-Lst7p GTPase activating protein complex for Gtr2p; stimulates the GTPase activity of Rag family GTPase Gtr2p, within the context of the Gtr1p-Gtr2p heterodimer, after amino acid stimulation; required for activation of TORC1 in response to amino acid stimulation; recruited to the vacuolar membrane during amino acid starvation and released from the membrane by TORC1; required for the transport of amino acid permease Gap1p from the Golgi to the cell surface","termid":"PBO:0087673"}


id: GO:0055062
data:
  {"annotated_genes":["SJAG_00244","SJAG_01713","SJAG_03624","SJAG_01000","SJAG_04242","SJAG_03061","SJAG_04870","SJAG_03519","SJAG_05325","SJAG_03644","SJAG_00232"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105126,96153,98691,98692,98690,84849,88233,103671,103791,111133,110688,93300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030643"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of phosphate ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00232":null,"SJAG_00244":null,"SJAG_01000":null,"SJAG_01713":null,"SJAG_03061":null,"SJAG_03519":null,"SJAG_03624":null,"SJAG_03644":null,"SJAG_04242":null,"SJAG_04870":null,"SJAG_05325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"phosphate ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Pi homeostasis","type":"exact"},{"name":"phosphate homeostasis","type":"broad"}],"termid":"GO:0055062","terms_by_termid":{"GO:0030643":null}}


id: PR:O42883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.06 gene.","definition_xrefs":["UniProtKB:O42883","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.06","synonyms":[{"name":"Spom972h-SPAC8E11.06","type":"exact"}],"termid":"PR:O42883"}


id: FYPO:0002843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the nucleoplasm is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"output_of","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to nucleoplasm","synonyms":[{"name":"ectopic protein localization to nucleoplasm","type":"exact"},{"name":"protein mislocalised to nucleoplasm","type":"exact"},{"name":"protein mislocalised to nucleoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0002843"}


id: GO:0009064
data:
  {"annotated_genes":["SJAG_00937","SJAG_00392","SJAG_01455","SJAG_03505","SJAG_01574","SJAG_00691","SJAG_01630","SJAG_01903","SJAG_04577","SJAG_00636","SJAG_01592","SJAG_00881","SJAG_05024","SJAG_04145","SJAG_00120","SJAG_02235","SJAG_01461","SJAG_03355","SJAG_00412","SJAG_00811","SJAG_03306","SJAG_00695","SJAG_04054","SJAG_04634","SJAG_03457","SJAG_03775","SJAG_02309","SJAG_03224","SJAG_00714","SJAG_03398","SJAG_00660","SJAG_03266","SJAG_03434","SJAG_00495","SJAG_00529","SJAG_01019","SJAG_00964","SJAG_02276","SJAG_00635","SJAG_02408","SJAG_00359"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97627,90376,113802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[106556,107166,107997,88854,114449,102599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006526"},{"annotations":[94267,98717,94275,99548,107998,114450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[102858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[109302,93459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[109303,93460,102859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[102069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006530"},{"annotations":[78456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[87804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006540"},{"annotations":[100834,89028,92783,98718,109544,107907,86990,107999,83982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006536"},{"annotations":[90377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"},{"annotations":[63658,66717,62602,107167,89514,62168,66527,56921,91055,60006,67526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006541"},{"annotations":[113803,107322,97628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[86991,97880,96261,102860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"},{"annotations":[86992,96262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006561"},{"annotations":[88855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006562"},{"annotations":[103209,114069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[103645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006560"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00359":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00495":null,"SJAG_00529":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00691":null,"SJAG_00695":null,"SJAG_00714":null,"SJAG_00811":null,"SJAG_00881":null,"SJAG_00937":null,"SJAG_00964":null,"SJAG_01019":null,"SJAG_01455":null,"SJAG_01461":null,"SJAG_01574":null,"SJAG_01592":null,"SJAG_01630":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02276":null,"SJAG_02309":null,"SJAG_02408":null,"SJAG_03224":null,"SJAG_03266":null,"SJAG_03306":null,"SJAG_03355":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03457":null,"SJAG_03505":null,"SJAG_03775":null,"SJAG_04054":null,"SJAG_04145":null,"SJAG_04577":null,"SJAG_04634":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glutamine family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"glutamine family amino acid metabolism","type":"exact"}],"termid":"GO:0009064","terms_by_termid":{"GO:0006526":null,"GO:0006530":null,"GO:0006536":null,"GO:0006538":null,"GO:0006540":null,"GO:0006541":null,"GO:0006542":null,"GO:0006560":null,"GO:0006561":null,"GO:0006562":null,"GO:0010121":null,"GO:0010133":null,"GO:0019544":null,"GO:0019547":null,"GO:0019676":null,"GO:0042450":null,"GO:0055129":null,"GO:0097054":null}}


id: PBO:0087737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SMC5-SMC6 complex; the SMC5-SMC6 complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; homologous to S. pombe rad18","termid":"PBO:0087737"}


id: PBO:0088358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease, XP-G family protein Ast1","termid":"PBO:0088358"}


id: FYPO:0006205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dGTP measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular dNTP level","termid":"FYPO:0005753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular dGTP level","synonyms":[{"name":"normal cellular dGTP level during mitotic cell cycle","type":"related"},{"name":"normal cellular dGTP level during vegetative growth","type":"exact"},{"name":"normal dGTP accumulation","type":"related"}],"termid":"FYPO:0006205"}


id: GO:0047505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-menthol + H+ + NADPH + O2 = 1,4-menthane-3,8-diol + H2O + NADP+.","definition_xrefs":["RHEA:11648","EC:1.14.13.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(-)-menthol monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02178","MetaCyc:--MENTHOL-MONOOXYGENASE-RXN"],"synonyms":[{"name":"(-)-menthol,NADPH:oxygen oxidoreductase (8-hydroxylating)","type":"related"},{"name":"l-menthol monooxygenase activity","type":"related"}],"termid":"GO:0047505"}


id: GO:1904001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of pyrimidine-containing compound salvage.","definition_xrefs":["GO_REF:0000063","GOC:TermGenie","GOC:al","PMID:23695302"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of pyrimidine-containing compound salvage by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1904001)","synonyms":[{"name":"activation of pyrimidine salvage by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of pyrimidine-containing compound salvage by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of pyrimidine salvage by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of pyrimidine salvage by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of pyrimidine-containing compound salvage by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of pyrimidine salvage by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of pyrimidine-containing compound salvage by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of pyrimidine salvage by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of pyrimidine-containing compound salvage by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1904001"}


id: GO:0016324
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the plasma membrane located at the apical end of the cell.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"apical plasma membrane","termid":"GO:0016324"}


id: PBO:0086989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressor of transcription at Start; binds to SBF (Swi4p-Swi6p) at SCB promoter elements in G1 to repress transcription; inhibitor of Start that retains Cdc28-Cln3 at the ER; acts with Ydj1p to promote release of the complex in a growth-mediated positive feedback loop to trigger Start; Srl3p is unstable and degraded by SCF-Grr1 after Cdc28p-dependent phosphorylation; contains a GTB (G1/S transcription factor binding) motif; binds SBF-regulated promoters in HU-treated cells; Cdc28p substrate","termid":"PBO:0086989"}


id: PBO:0042001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 54","termid":"PBO:0042001"}


id: GO:1901029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"negative regulation of mitochondrial membrane permeability","termid":"GO:0035795"},{"relation_name":"is_a","term_name":"regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway","termid":"GO:1901028"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic signaling pathway","termid":"GO:2001234"},{"relation_name":"negatively_regulates","term_name":"mitochondrial outer membrane permeabilization","termid":"GO:0097345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0007005","GO:0008150","GO:0023052","GO:0061024"],"is_obsolete":false,"name":"negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway","synonyms":[{"name":"down regulation of MOMP","type":"exact"},{"name":"down regulation of mitochondrial outer membrane permeabilization","type":"exact"},{"name":"down-regulation of MOMP","type":"exact"},{"name":"down-regulation of mitochondrial outer membrane permeabilization","type":"exact"},{"name":"downregulation of MOMP","type":"exact"},{"name":"downregulation of mitochondrial outer membrane permeabilization","type":"exact"},{"name":"inhibition of MOMP","type":"narrow"},{"name":"inhibition of mitochondrial outer membrane permeabilization","type":"narrow"},{"name":"negative regulation of MOMP","type":"exact"},{"name":"negative regulation of mitochondrial outer membrane permeabilization","type":"broad"}],"termid":"GO:1901029"}


id: GO:0052097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a community of single-celled organisms of different species monitors population density by detecting the concentration of small diffusible signal molecules.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interspecies quorum sensing (obsolete GO:0052097)","termid":"GO:0052097"}


id: PBO:0090403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex, histone acetyltransferase subunit Taf111","termid":"PBO:0090403"}


id: PBO:0089149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF126 ortholog","termid":"PBO:0089149"}


id: PBO:0004432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA acetyltransferase (predicted)","termid":"PBO:0004432"}


id: GO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and/or excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph","ISBN:0721662544","ISBN:0124020607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney development","secondary_identifiers":["Wikipedia:Kidney_development"],"synonyms":[{"name":"nephrogenesis","type":"related"}],"termid":"GO:0001822"}


id: PBO:0069067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 314, pseudogene","termid":"PBO:0069067"}


id: PBO:0059935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 21","termid":"PBO:0059935"}


id: PBO:0079429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin delta 1","termid":"PBO:0079429"}


id: GO:0099079
data:
  {"annotated_genes":["SJAG_02700","SJAG_02566","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94987,97843,101214],"is_not":false,"summary":null,"term":"GO:0099079"}]},"cv_name":"cellular_component","definition":"An amorphous cytoskeletal structure consisting of aggregated actin filaments and associated proteins (including fibrin and capping protein) in which there is little or no actin filament turnover. In yeast (S. pombe and S. cerevisiae) these are found only in quiescent cells and are thought to serve as a reserve store of actin.","definition_xrefs":["PMID:16914523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02566":null,"SJAG_02700":null,"SJAG_03088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"actin body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099079","terms_by_termid":{"GO:0099079":null}}


id: PBO:0081400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 248","termid":"PBO:0081400"}


id: FYPO:0000783
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cytoplasm is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"ectopic protein localization to cytoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalised to cytoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000783","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: PBO:0078412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (CCC) 6-1","termid":"PBO:0078412"}


id: SO:0001219
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that has been produced as the product of a reverse transcriptase mediated event.","direct_ancestors":[{"relation_name":"has_quality","term_name":"retrotransposed","termid":"SO:0000569"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrogene","termid":"SO:0001219"}


id: PBO:0047583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 3 pseudogene 3","termid":"PBO:0047583"}


id: PR:Q9Y804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Fanconi-associated nuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi-associated nuclease 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.06c","secondary_identifiers":["UniProtKB:Q9Y804"],"synonyms":[{"name":"Spom972h-FAN1","type":"exact"}],"termid":"PR:Q9Y804"}


id: GO:0070467
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains DNA ligase III, DNA polymerase epsilon, a 5'-3' exonuclease, and the SMC1 and SMC2 proteins, and is involved in recombinational repair of deletions and gaps in DNA.","definition_xrefs":["PMID:8670910","PMID:8392064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RC-1 DNA recombination complex","synonyms":[{"name":"DNA recombination complex RC-1","type":"exact"},{"name":"RC-1 complex (recombination complex 1)","type":"exact"}],"termid":"GO:0070467"}


id: PBO:0029433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0029433"}


id: GO:1903928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyanide stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:21854848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to cyanide","termid":"GO:1903927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cyanide","termid":"GO:1903928"}


id: GO:1900585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving arugosin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"arugosin metabolic process","synonyms":[{"name":"arugosin metabolism","type":"exact"}],"termid":"GO:1900585"}


id: PBO:0002743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human AMSH/STAMBP protein homolog, ubiquitin specific-protease","termid":"PBO:0002743"}


id: PR:P08094
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp201 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P08094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2-alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.06","synonyms":[{"name":"A2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"L12EI (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"L40C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpp201","type":"exact"}],"termid":"PR:P08094"}


id: GO:0140596
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large mitochondrial outer membrane translocase complex that mediates transport of proteins into mitochondrial compartments. TOM transports beta-barrel precursors across the outer membrane and the sorting and assembly machinery (SAM complex) inserts them into the target membrane.","definition_xrefs":["PMID:33035511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial outer membrane translocase complex","termid":"GO:0005742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"TOM complex","synonyms":[{"name":"translocase of the outer mitochondrial membrane","type":"exact"}],"termid":"GO:0140596"}


id: PBO:0069271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 527, pseudogene","termid":"PBO:0069271"}


id: PBO:0030638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATPase_activity","termid":"PBO:0030638"}


id: FYPO:0006298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of the 5.8S ribosomal RNA molecule is abnormal.","definition_xrefs":["PomBase:mah","GO:0000467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"},{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal 5.8S rRNA 3'-end processing","synonyms":[{"name":"abnormal 5.8S rRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal 5.8S rRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"abnormal exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","type":"exact"}],"termid":"FYPO:0006298"}


id: PBO:0026652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_zinc_ion","termid":"PBO:0026652"}


id: PBO:0005871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"21S rRNA","termid":"PBO:0005871"}


id: PBO:0040041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor nuclear translocator","termid":"PBO:0040041"}


id: PBO:0063557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pellino E3 ubiquitin protein ligase 1","termid":"PBO:0063557"}


id: PBO:0030756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate_dehydrogenase_(NAD+)_activity","termid":"PBO:0030756"}


id: PBO:0083528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SFL1/YOR140W","termid":"PBO:0083528"}


id: PBO:0063578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PERP pseudogene 1","termid":"PBO:0063578"}


id: SO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron that is not the most 3-prime or the most 5-prime in a given transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interior_intron","synonyms":[{"name":"interior intron","type":"exact"}],"termid":"SO:0000191"}


id: PBO:0079160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPAN18 antisense RNA 1","termid":"PBO:0079160"}


id: GO:0019105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a palmitoyl group to a nitrogen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-palmitoyltransferase activity (obsolete GO:0019105)","termid":"GO:0019105"}


id: PBO:0090748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II binding AAA family ATPase Npa3","termid":"PBO:0090748"}


id: GO:1905848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to oxidopamine.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23721876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidopamine","termid":"GO:1905846"},{"relation_name":"positively_regulates","term_name":"cellular response to oxidopamine","termid":"GO:1905842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to oxidopamine","synonyms":[{"name":"activation of cellular response to oxidopamine","type":"narrow"},{"name":"up regulation of cellular response to oxidopamine","type":"exact"},{"name":"up-regulation of cellular response to oxidopamine","type":"exact"},{"name":"upregulation of cellular response to oxidopamine","type":"exact"}],"termid":"GO:1905848"}


id: GO:0086070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates interactions between an SA node cardiomyocyte and its surroundings that contributes to the process of the SA node cardiomyocyte communicating with an atrial cardiomyocyte in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"SA node cell to atrial cardiac muscle cell communication","synonyms":[{"name":"SA node cardiac muscle cell to atrial cardiac muscle cell communication","type":"exact"},{"name":"SA node cardiomyocyte to atrial cardiomyocyte communication","type":"exact"},{"name":"SAN cardiomyocyte to atrial cardiomyocyte communication","type":"exact"},{"name":"sinoatrial node cardiomyocyte to atrial cardiomyocyte communication","type":"exact"},{"name":"sinus node cardiomyocyte to atrial cardiomyocyte communication","type":"narrow"}],"termid":"GO:0086070"}


id: PBO:0070328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, Ro60-associated Y4","termid":"PBO:0070328"}


id: GO:0019383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (+)-camphor, a bicyclic monoterpene ketone.","definition_xrefs":["UM-BBD_pathwayID:cam"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid catabolic process","termid":"GO:0016100"},{"relation_name":"is_a","term_name":"(+)-camphor metabolic process","termid":"GO:0018882"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"(+)-camphor catabolic process","secondary_identifiers":["MetaCyc:P601-PWY"],"synonyms":[{"name":"(+)-camphor breakdown","type":"exact"},{"name":"(+)-camphor catabolism","type":"exact"},{"name":"(+)-camphor degradation","type":"exact"}],"termid":"GO:0019383"}


id: PBO:0061516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 6","termid":"PBO:0061516"}


id: PBO:0027954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pyridoxal_kinase_activity","termid":"PBO:0027954"}


id: GO:0007562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The emergence of an adult insect from a pupa case.","definition_xrefs":["ISBN:0198600461","GOC:mah","GOC:dgh","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organism emergence from protective structure","termid":"GO:0071684"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eclosion","secondary_identifiers":["Wikipedia:Pupa#Emergence"],"termid":"GO:0007562"}


id: PBO:0075849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 1","termid":"PBO:0075849"}


id: GO:0006462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein complex assembly, multichaperone pathway (obsolete GO:0006462)","synonyms":[{"name":"protein complex assembly, multichaperone pathway","type":"exact"}],"termid":"GO:0006462"}


id: PBO:0063907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase adaptor protein 1","termid":"PBO:0063907"}


id: PBO:0052376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 20A","termid":"PBO:0052376"}


id: GO:0033513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA, via the intermediate 5-aminopentanamide.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0055086","GO:0044248","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"L-lysine catabolic process to acetyl-CoA via 5-aminopentanamide","synonyms":[{"name":"L-lysine breakdown to acetyl-CoA via 5-aminopentanamide","type":"exact"},{"name":"L-lysine degradation to acetyl-CoA via 5-aminopentanamide","type":"exact"}],"termid":"GO:0033513"}


id: PBO:0075610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speckle type BTB/POZ protein like","termid":"PBO:0075610"}


id: PBO:0042726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein C pseudogene 1","termid":"PBO:0042726"}


id: GO:0047473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the ATP-dependent activation of D-alanine and its transfer as a thiol ester to the phosphopantheinyl prosthetic group of a D-alanyl carrier protein, according to the reaction: ATP + D-alanine + a [D-alaninyl carrier protein] = a D-alanyl-[D-alanyl carrier protein] + AMP + diphosphate.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"D-alanine [D-alanyl carrier protein] ligase activity","synonyms":[{"name":"D-alanine-D-alanyl carrier protein ligase activity","type":"related"},{"name":"D-alanine-activating enzyme activity","type":"related"},{"name":"D-alanine-poly(phosphoribitol) ligase activity","type":"broad"},{"name":"D-alanine:poly(phosphoribitol) ligase (AMP-forming)","type":"broad"}],"termid":"GO:0047473"}


id: PR:O43068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde4 gene.","definition_xrefs":["UniProtKB:O43068","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopolin complex subunit mde4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.04","synonyms":[{"name":"Spom972h-mde4","type":"exact"},{"name":"mei4-dependent protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43068"}


id: GO:0017146
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD.","definition_xrefs":["PMID:8294079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic glutamate receptor complex","termid":"GO:0008328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"NMDA selective glutamate receptor complex","synonyms":[{"name":"N-methyl-D-aspartate selective glutamate receptor complex","type":"exact"},{"name":"NMDA-selective glutamate receptor","type":"exact"}],"termid":"GO:0017146"}


id: PBO:0072104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 2","termid":"PBO:0072104"}


id: GO:0052354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of carbohydrate molecules within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of carbohydrate in other organism involved in symbiotic interaction (obsolete GO:0052354)","synonyms":[{"name":"catabolism by organism of carbohydrate in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052354"}


id: GO:0016074
data:
  {"annotated_genes":["SJAG_00752","SJAG_03745","SJAG_01191","SJAG_04942","SJAG_03448","SJAG_03112","SJAG_02350","SJAG_04321","SJAG_04527","SJAG_03179","SJAG_03984","SJAG_04153","SJAG_02553","SJAG_01369","SJAG_00943","SJAG_01176","SJAG_04768","SJAG_04754","SJAG_06613","SJAG_00854","SJAG_03234","SJAG_01521","SJAG_02382"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113740],"is_not":false,"summary":null,"term":"GO:0016074"},{"annotations":[104185,106290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000494"},{"annotations":[98269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106410"},{"annotations":[91456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"},{"annotations":[100857,109584,111391,87189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034965"},{"annotations":[109362,88345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071036"},{"annotations":[98183,89169,92025,102549,111527,88348,93363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071051"},{"annotations":[88922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031126"},{"annotations":[84512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016077"},{"annotations":[85208,83633,86905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043144"},{"annotations":[99122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034247"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving snoRNA, small nucleolar RNA, any of a class of small RNAs that are associated with the eukaryotic nucleus as components of small nucleolar ribonucleoproteins. They participate in the processing or modifications of many RNAs, mostly ribosomal RNAs (rRNAs) though snoRNAs are also known to target other classes of RNA, including spliceosomal RNAs, tRNAs, and mRNAs via a stretch of sequence that is complementary to a sequence in the targeted RNA.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00752":null,"SJAG_00854":null,"SJAG_00943":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01369":null,"SJAG_01521":null,"SJAG_02350":null,"SJAG_02382":null,"SJAG_02553":null,"SJAG_03112":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03448":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04754":null,"SJAG_04768":null,"SJAG_04942":null,"SJAG_06613":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sno(s)RNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box C/D sRNA metabolic process","type":"narrow"},{"name":"snoRNA metabolism","type":"narrow"}],"termid":"GO:0016074","terms_by_termid":{"GO:0000494":null,"GO:0000495":null,"GO:0016074":null,"GO:0016077":null,"GO:0031126":null,"GO:0034247":null,"GO:0034965":null,"GO:0043144":null,"GO:0071036":null,"GO:0071051":null,"GO:0106410":null}}


id: PBO:0113387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by expression profiling and mass spectrometry; localizes to the peroxisome in a Pex5p-dependent manner in oleate","termid":"PBO:0113387"}


id: PBO:0048876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member B","termid":"PBO:0048876"}


id: PBO:0059883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 6","termid":"PBO:0059883"}


id: GO:0004984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an odorant and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity in response to detection of smell.","definition_xrefs":["GOC:bf","GOC:dph","PMID:19135896","GOC:sart","PMID:21041441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"olfactory receptor activity","synonyms":[{"name":"odorant receptor activity","type":"exact"}],"termid":"GO:0004984"}


id: GO:0016567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which one or more ubiquitin groups are added to a protein.","definition_xrefs":["PMID:26906419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein ubiquitination","synonyms":[{"name":"protein ubiquitinylation","type":"exact"},{"name":"protein ubiquitylation","type":"exact"}],"termid":"GO:0016567"}


id: PR:Q9P7W1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1703.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7W1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1703.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.09","synonyms":[{"name":"Spom972h-SPBC1703.09","type":"exact"}],"termid":"PR:Q9P7W1"}


id: GO:0051163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-arabitol, the pentitol derived from arabinose or lyxose by reduction of the aldehyde group. The D enantiomer is present in lichens and mushrooms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabitol metabolic process","termid":"GO:0051161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"D-arabitol metabolic process","synonyms":[{"name":"D-arabitol metabolism","type":"exact"}],"termid":"GO:0051163"}


id: PATO:0000174
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000174 autonomic function (obsolete PATO:0000174)","termid":"PATO:0000174"}


id: PBO:0089268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf6","termid":"PBO:0089268"}


id: GO:0035203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lamellocyte differentiation. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["PMID:14734104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"is_a","term_name":"regulation of hemopoiesis","termid":"GO:1903706"},{"relation_name":"regulates","term_name":"lamellocyte differentiation","termid":"GO:0035171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lamellocyte differentiation","termid":"GO:0035203"}


id: GO:0061790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial attachment of a dense core granule membrane to the plasma membrane.","definition_xrefs":["PMID:26575293","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"},{"relation_name":"part_of","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0140056","GO:0016192","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"dense core granule docking","termid":"GO:0061790"}


id: GO:0060014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a granulosa cell, a supporting cell for the developing female gamete in the ovary of mammals.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell differentiation","termid":"GO:0060014"}


id: GO:0032231
data:
  {"annotated_genes":["SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103707],"is_not":false,"summary":null,"term":"GO:0032231"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of actin filament bundles.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"},{"relation_name":"regulates","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament bundle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin cable assembly","type":"exact"},{"name":"regulation of actin filament bundle formation","type":"related"}],"termid":"GO:0032231","terms_by_termid":{"GO:0032231":null}}


id: FYPO:0002414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable swollen vegetative cell","synonyms":[{"name":"inviable enlarged vegetative cell","type":"related"},{"name":"inviable large vegetative cell","type":"related"},{"name":"inviable swollen cell during vegetative growth","type":"exact"},{"name":"inviable swollen vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable vegetative cell with increased cell size","type":"related"},{"name":"inviable vegetative cell with increased cell volume","type":"exact"},{"name":"lethal; swollen vegetative cell","type":"exact"}],"termid":"FYPO:0002414"}


id: GO:0052043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a host cellular component. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host cellular component (obsolete GO:0052043)","termid":"GO:0052043"}


id: GO:0015135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glucuronate from one side of a membrane to the other. Glucuronate is the uronic acid formally derived from glucose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glucuronate transmembrane transporter activity","termid":"GO:0015135"}


id: MOD:01251
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-[3-(carboxamidomethylthio)propanoyl]lysine.","definition_xrefs":["Unimod:293#K","PubMed:15121203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-(carboxamidomethylthio)propanoylated residue","termid":"MOD:00612"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-[3-(carboxamidomethylthio)propanoyl]lysine","synonyms":[{"name":"3-(carbamidomethylthio)propanoyl","type":"related"},{"name":"CAMthiopropanoyl","type":"related"}],"termid":"MOD:01251"}


id: RO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"immediately_preceded_by","termid":"RO:0002087"},{"relation_name":"is_a","term_name":"causally_downstream_of","termid":"RO:0002404"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_causally_downstream_of","termid":"RO:0002405"}


id: MOD:01433
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue into 1-amino-2-propanone.","definition_xrefs":["RESID:AA0486","PubMed:12715872","ChEBI:17906","PubMed:19196969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrogenated residue","termid":"MOD:00683"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"decarboxylated residue","termid":"MOD:00960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-amino-2-propanone","synonyms":[{"name":"1-amino-2-propanone","type":"exact"},{"name":"1-aminopropan-2-one","type":"exact"},{"name":"1-aminopropanone","type":"exact"},{"name":"MOD_RES 1-amino-2-propanone","type":"exact"},{"name":"aminoacetone","type":"exact"}],"termid":"MOD:01433"}


id: PBO:0039199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 2","termid":"PBO:0039199"}


id: SO:0000574
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Rearranged genomic DNA of immunoglobulin/T-cell receptor gene including L-part1, V-intron and V-D-J-exon, with the 5'UTR (SO:0000204) and 3'UTR (SO:0000205).","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDJ_gene_segment","synonyms":[{"name":"V-D-J-GENE","type":"exact"},{"name":"VDJ gene","type":"exact"}],"termid":"SO:0000574"}


id: PBO:0041064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRF2 RNA polymerase III transcription initiation factor subunit","termid":"PBO:0041064"}


id: PBO:0057651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1244-4","termid":"PBO:0057651"}


id: SO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A Y-RNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"Y_RNA_primary_transcript","termid":"SO:0002042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_Y_RNA_primary_transcript","synonyms":[{"name":"miR encoding Y-RNA primary transcript","type":"exact"}],"termid":"SO:0002043"}


id: GO:0004047
data:
  {"annotated_genes":["SJAG_03641","SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92511,109126],"is_not":false,"summary":null,"term":"GO:0004047"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-tetrahydrofolate + S-aminomethyldihydrolipoylprotein = (6R)-5,10-methylenetetrahydrofolate + NH3 + dihydrolipoylprotein.","definition_xrefs":["EC:2.1.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02901":null,"SJAG_03641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aminomethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:16945","MetaCyc:GCVT-RXN","Reactome:R-HSA-5693977"],"synonyms":[{"name":"S-aminomethyldihydrolipoylprotein:(6S)-tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"T-protein","type":"related"},{"name":"glycine synthase activity","type":"related"},{"name":"glycine-cleavage system T-protein activity","type":"related"},{"name":"protein-8-S-aminomethyldihydrolipoyllysine:tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"protein-S8-aminomethyldihydrolipoyllysine:tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"tetrahydrofolate aminomethyltransferase activity","type":"related"}],"termid":"GO:0004047","terms_by_termid":{"GO:0004047":null}}


id: PBO:0081248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 19","termid":"PBO:0081248"}


id: GO:0016699
data:
  {"annotated_genes":["SJAG_02497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008901"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019110","GO:0016736","EC:1.12.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on hydrogen as donor, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016699","terms_by_termid":{"GO:0008901":null}}


id: PBO:0052733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 25","termid":"PBO:0052733"}


id: PBO:0031565
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_binding","termid":"PBO:0031565"}


id: PBO:0082363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy-specific subunit of phosphatidylinositol 3-kinase complex I; Atg14p targets complex I to the phagophore assembly site (PAS); required for localizing additional ATG proteins to the PAS; required for overflow degradation of misfolded proteins when ERAD is saturated; homolog of human Barkor; other members are Vps34, Vps15, and Vps30p","termid":"PBO:0082363"}


id: PBO:0056620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial trans-2-enoyl-CoA reductase","termid":"PBO:0056620"}


id: GO:1990973
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A linear array of nuclear envelope membrane proteins composed of nesprin-2G and SUN2, which couple the nucleus to moving actin cables, resulting in rearward nuclear transport (away from the leading edge).","definition_xrefs":["GOC:hjd","PMID:21173262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"transmembrane actin-associated (TAN) line","synonyms":[{"name":"TAN line","type":"related"}],"termid":"GO:1990973"}


id: PBO:0027900
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_calcium_import","termid":"PBO:0027900"}


id: GO:0009988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell recognition between cells. May involve the formation of specialized cell junctions.","definition_xrefs":["ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell recognition","termid":"GO:0009988"}


id: PBO:0043801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 1","termid":"PBO:0043801"}


id: PBO:0062552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily Q member 2","termid":"PBO:0062552"}


id: FYPO:0000211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A chemical response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to a chemical is abnormal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cellular response to drug (obsolete FYPO:0000211)","synonyms":[{"name":"abnormal cellular response to drug during vegetative growth","type":"exact"}],"termid":"FYPO:0000211"}


id: GO:0036076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ossification wherein bone tissue forms within ligamentous tissue.","definition_xrefs":["GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ligamentous ossification","termid":"GO:0036076"}


id: PBO:0047115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 162 member B","termid":"PBO:0047115"}


id: PBO:0038989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor beta 3","termid":"PBO:0038989"}


id: PBO:0049948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIF1A antisense RNA 1","termid":"PBO:0049948"}


id: FYPO:0000643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic DNA integrity checkpoint is abnormal. A DNA integrity checkpoint normally regulates cell cycle progression in response to changes in DNA structure. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle checkpoint","termid":"FYPO:0001704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic DNA integrity checkpoint","synonyms":[{"name":"abnormal mitotic DNA integrity checkpoint activation","type":"exact"}],"termid":"FYPO:0000643"}


id: PBO:0074803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13H","termid":"PBO:0074803"}


id: PBO:0043859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRADD antisense RNA 1","termid":"PBO:0043859"}


id: FYPO:0000841
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115321],"is_not":false,"summary":null,"term":"FYPO:0000841"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium dodecyl sulfate (SDS). Cells stop growing (and may die) at a concentration of SDS that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":1,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to sodium dodecyl sulfate","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266"],"single_locus_genotype_uniquenames":["atf1delta"],"synonyms":[{"name":"hypersensitive to sodium dodecyl sulfate","type":"exact"},{"name":"sensitive to SDS","type":"exact"},{"name":"sensitive to sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"sensitive to sodium dodecyl sulphate","type":"exact"}],"termid":"FYPO:0000841","terms_by_termid":{"FYPO:0000841":null,"FYPO_EXT:0000001":null}}


id: PBO:0055091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2509","termid":"PBO:0055091"}


id: PBO:0046985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member J, pseudogene","termid":"PBO:0046985"}


id: PBO:0029357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_dTTP_level","termid":"PBO:0029357"}


id: GO:0090432
data:
  {"annotated_genes":["SJAG_03471","SJAG_03909"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101684,109517],"is_not":false,"summary":null,"term":"GO:0090432"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myristic acid + CoA = AMP + diphosphate + myristoyl-CoA.","definition_xrefs":["PMID:18071249","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid-CoA ligase activity","termid":"GO:0004467"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"myristoyl-CoA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"myristoyl-CoA synthetase activity","type":"exact"}],"termid":"GO:0090432","terms_by_termid":{"GO:0090432":null}}


id: PBO:0085434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; specific for spermine; localizes to the plasma membrane; transcription of TPO2 is regulated by Haa1p; TPO2 has a paralog, TPO3, that arose from the whole genome duplication","termid":"PBO:0085434"}


id: PBO:0070635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 6","termid":"PBO:0070635"}


id: PBO:0028654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_snRNA_3'-end_processing","termid":"PBO:0028654"}


id: GO:0070176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptional repressor complex that contains the lin-9, lin-35, lin-37, lin-52, lin-53, lin-5is involved in 4-, dpl-1 and efl-1 proteins, and is involved in cell fate specification.","definition_xrefs":["PMID:17075059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DRM complex","synonyms":[{"name":"DP/Rb/MuvB","type":"exact"}],"termid":"GO:0070176"}


id: GO:0018255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of S-(peptidyl-glycyl)-peptidyl-cysteine cross-links by the formation of a thiolester between cysteine and the carboxy-terminal glycine of ubiquitin and other proteins.","definition_xrefs":["GOC:jh2","RESID:AA0206"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-glycyl-L-cysteine (obsolete GO:0018255)","termid":"GO:0018255"}


id: PBO:0055345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2773","termid":"PBO:0055345"}


id: GO:0034959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the attainment of the full functional capacity of endothelin by conversion of Big-endothelin substrate into mature endothelin.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by endothelin","termid":"GO:0003100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"endothelin maturation","termid":"GO:0034959"}


id: PBO:0046460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial stromal interaction 1","termid":"PBO:0046460"}


id: PBO:0043582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XIV alpha 1 chain","termid":"PBO:0043582"}


id: PBO:0000303
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Csx1 Interacting Protein","termid":"PBO:0000303"}


id: PBO:0040438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8A2 pseudogene 3","termid":"PBO:0040438"}


id: PBO:0065671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRS antisense RNA 1","termid":"PBO:0065671"}


id: PBO:0082751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sec23p-Sec24p heterodimer of the COPII vesicle coat; required for cargo selection during vesicle formation in ER to Golgi transport; homologous to Sfb3p; SEC24 has a paralog, SFB2, that arose from the whole genome duplication","termid":"PBO:0082751"}


id: PBO:0074643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 35B","termid":"PBO:0074643"}


id: GO:0180004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat--phospho-L-tyrosine (consensus YSPTSPS)(position 1) + H2O = RNA polymerase II large subunit + phosphate.","definition_xrefs":["PMID:22622228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat phosphatase activity","termid":"GO:0008420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0140096","GO:0003674","GO:0016787","GO:0004721"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain Y1 phosphatase activity","type":"exact"}],"termid":"GO:0180004"}


id: PBO:0048511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 15","termid":"PBO:0048511"}


id: GO:0003851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acylsphing-4-enine + UDP-alpha-D-galactose = a beta-D-galactosyl-(1<->1')-N-acylsphing-4-enine + H+ + UDP.","definition_xrefs":["EC:2.4.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"N-acylsphingosine galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-6785933","RHEA:13093","MetaCyc:2.4.1.47-RXN"],"synonyms":[{"name":"2-hydroxyacylsphingosine 1-beta-galactosyltransferase activity","type":"exact"}],"termid":"GO:0003851"}


id: GO:1990419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an elemental metal stimulus.","definition_xrefs":["PMID:22688007"],"gene_count":0,"genotype_count":0,"name":"obsolete response to elemental metal (obsolete GO:1990419)","synonyms":[{"name":"response to elemental metal","type":"exact"}],"termid":"GO:1990419"}


id: PBO:0005568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein","termid":"PBO:0005568"}


id: _global:trans_spliced_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_spliced_from","termid":"_global:trans_spliced_from"}


id: SO:0001097
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with iron ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_iron_ion_contact_site","secondary_identifiers":["BS:00137"],"synonyms":[{"name":"Fe_contact_site","type":"exact"},{"name":"polypeptide iron ion contact site","type":"exact"}],"termid":"SO:0001097"}


id: GO:0007607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events required for the chemical composition of a soluble stimulus to be received and converted to a molecular signal.","definition_xrefs":["ISBN:0395825172","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete taste perception (obsolete GO:0007607)","synonyms":[{"name":"taste perception","type":"exact"}],"termid":"GO:0007607"}


id: MOD:00845
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one or more (18)O atoms for (16)O atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O labeled residue","termid":"MOD:00844"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O substituted residue","termid":"MOD:00845"}


id: GO:0071904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of protein N-linked glycosylation via asparagine in which N-acetylgalactosamine is added to the N4 of asparagine, forming an (S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-galactopyranosyl)amino-4-oxobutanoic acid residue.","definition_xrefs":["GOC:pr","RESID:AA0420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein N-linked glycosylation via asparagine","termid":"GO:0018279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein N-linked N-acetylgalactosaminylation via asparagine","synonyms":[{"name":"protein amino acid N-linked N-acetylgalactosaminylation via asparagine","type":"exact"}],"termid":"GO:0071904"}


id: PBO:0074429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 29","termid":"PBO:0074429"}


id: GO:1904966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vitamin E biosynthetic process.","definition_xrefs":["PMID:20823244","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of vitamin metabolic process","termid":"GO:0046136"},{"relation_name":"is_a","term_name":"regulation of vitamin E biosynthetic process","termid":"GO:1904965"},{"relation_name":"positively_regulates","term_name":"vitamin E biosynthetic process","termid":"GO:0010189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vitamin E biosynthetic process","synonyms":[{"name":"activation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"activation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"activation of tocopherol biosynthesis","type":"narrow"},{"name":"activation of tocopherol biosynthetic process","type":"narrow"},{"name":"activation of vitamin E anabolism","type":"narrow"},{"name":"activation of vitamin E biosynthesis","type":"narrow"},{"name":"activation of vitamin E biosynthetic process","type":"narrow"},{"name":"activation of vitamin E formation","type":"narrow"},{"name":"activation of vitamin E synthesis","type":"narrow"},{"name":"positive regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"positive regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"positive regulation of tocopherol biosynthesis","type":"exact"},{"name":"positive regulation of tocopherol biosynthetic process","type":"exact"},{"name":"positive regulation of vitamin E anabolism","type":"exact"},{"name":"positive regulation of vitamin E biosynthesis","type":"exact"},{"name":"positive regulation of vitamin E formation","type":"exact"},{"name":"positive regulation of vitamin E synthesis","type":"exact"},{"name":"up regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"up regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"up regulation of tocopherol biosynthesis","type":"exact"},{"name":"up regulation of tocopherol biosynthetic process","type":"exact"},{"name":"up regulation of vitamin E anabolism","type":"exact"},{"name":"up regulation of vitamin E biosynthesis","type":"exact"},{"name":"up regulation of vitamin E biosynthetic process","type":"exact"},{"name":"up regulation of vitamin E formation","type":"exact"},{"name":"up regulation of vitamin E synthesis","type":"exact"},{"name":"up-regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"up-regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"up-regulation of tocopherol biosynthesis","type":"exact"},{"name":"up-regulation of tocopherol biosynthetic process","type":"exact"},{"name":"up-regulation of vitamin E anabolism","type":"exact"},{"name":"up-regulation of vitamin E biosynthesis","type":"exact"},{"name":"up-regulation of vitamin E biosynthetic process","type":"exact"},{"name":"up-regulation of vitamin E formation","type":"exact"},{"name":"up-regulation of vitamin E synthesis","type":"exact"},{"name":"upregulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"upregulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"upregulation of tocopherol biosynthesis","type":"exact"},{"name":"upregulation of tocopherol biosynthetic process","type":"exact"},{"name":"upregulation of vitamin E anabolism","type":"exact"},{"name":"upregulation of vitamin E biosynthesis","type":"exact"},{"name":"upregulation of vitamin E biosynthetic process","type":"exact"},{"name":"upregulation of vitamin E formation","type":"exact"},{"name":"upregulation of vitamin E synthesis","type":"exact"}],"termid":"GO:1904966"}


id: PBO:0025443
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maple Syrup Urine Disease","termid":"PBO:0025443"}


id: PBO:0002597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome-dependent catabolite inactivation protein, ubiquitin ligase complex subunit (predicted)","termid":"PBO:0002597"}


id: GO:1901911
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84843],"is_not":false,"summary":null,"term":"GO:1901911"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of adenosine 5'-(hexahydrogen pentaphosphate).","definition_xrefs":["GOC:TermGenie","PMID:10090752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"adenosine 5'-(hexahydrogen pentaphosphate) metabolic process","termid":"GO:1901910"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"adenosine 5'-(hexahydrogen pentaphosphate) catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 5'-(hexahydrogen pentaphosphate) breakdown","type":"exact"},{"name":"adenosine 5'-(hexahydrogen pentaphosphate) catabolism","type":"exact"},{"name":"adenosine 5'-(hexahydrogen pentaphosphate) degradation","type":"exact"}],"termid":"GO:1901911","terms_by_termid":{"GO:1901911":null}}


id: GO:0032144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex that possesses 4-aminobutyrate transaminase activity.","definition_xrefs":["PMID:15528998","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"4-aminobutyrate transaminase complex","synonyms":[{"name":"ABAT complex","type":"exact"},{"name":"GABA transaminase complex","type":"exact"},{"name":"GABA-T complex","type":"exact"}],"termid":"GO:0032144"}


id: PBO:0027028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_telomere_during_meiotic_cell_cycle","termid":"PBO:0027028"}


id: PBO:0080455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 2A","termid":"PBO:0080455"}


id: GO:1900511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of pentose catabolic process to ethanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of pentose catabolic process to ethanol (obsolete GO:1900511)","synonyms":[{"name":"activation of pentose catabolic process to ethanol","type":"narrow"},{"name":"activation of pentose catabolism to ethanol","type":"exact"},{"name":"positive regulation of pentose catabolism to ethanol","type":"exact"},{"name":"up regulation of pentose catabolic process to ethanol","type":"exact"},{"name":"up regulation of pentose catabolism to ethanol","type":"exact"},{"name":"up-regulation of pentose catabolic process to ethanol","type":"exact"},{"name":"up-regulation of pentose catabolism to ethanol","type":"exact"},{"name":"upregulation of pentose catabolic process to ethanol","type":"exact"},{"name":"upregulation of pentose catabolism to ethanol","type":"exact"}],"termid":"GO:1900511"}


id: GO:0044517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the activity of a vasoactive intestinal polypeptide receptor in a second organism.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of receptor activity in another organism","termid":"GO:0044504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of vasoactive intestinal polypeptide receptor activity in another organism","synonyms":[{"name":"modulation of VIP receptor activity in other organism","type":"exact"},{"name":"modulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"},{"name":"regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044517"}


id: GO:0005698
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The region of a eukaryotic chromosome that is attached to the spindle during nuclear division. It is defined genetically as the region of the chromosome that always segregates at the first division of meiosis; the region of the chromosome in which no crossing over occurs. At the start of M phase, each chromosome consists of two sister chromatids with a constriction at a point which forms the centromere. During late prophase two kinetochores assemble on each centromere, one kinetochore on each sister chromatid.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete centromere (obsolete GO:0005698)","synonyms":[{"name":"centromere","type":"exact"}],"termid":"GO:0005698"}


id: PBO:0054063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1410","termid":"PBO:0054063"}


id: PBO:0040936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 7","termid":"PBO:0040936"}


id: GO:0090126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a protein complex that contributes to synapse maturation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"synapse maturation","termid":"GO:0060074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"protein-containing complex assembly involved in synapse maturation","synonyms":[{"name":"protein complex assembly involved in synapse maturation","type":"related"}],"termid":"GO:0090126"}


id: PR:Q9USZ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor G, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23115:SF13","PRO:DNx","OMA:SCHPO02754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor G, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1306.01c","secondary_identifiers":["UniProtKB:Q9USZ1"],"synonyms":[{"name":"EF-Gmt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GFM1","type":"exact"},{"name":"elongation factor G 1, mitochondrial (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"elongation factor G1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mEF-G 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USZ1"}


id: PBO:0055062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2478","termid":"PBO:0055062"}


id: PBO:0047977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member D, pseudogene","termid":"PBO:0047977"}


id: PBO:0089015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methionyl-tRNA formyltransferase Fmt1","termid":"PBO:0089015"}


id: FYPO:0001047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell proceeds through the mitotic metaphase/anaphase transition in the presence of an uncorrected problem (such as chromosome structure or kinetochore attachment), and as a result undergoes abnormal nuclear division and subsequently dies.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe (obsolete FYPO:0001047)","synonyms":[{"name":"mitotic catastrophe during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe during vegetative growth","type":"exact"}],"termid":"FYPO:0001047"}


id: PBO:0091377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 family heat shock protein Ssa1","termid":"PBO:0091377"}


id: GO:0015316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrite/nitrate porter activity (obsolete GO:0015316)","synonyms":[{"name":"nitrite/nitrate porter activity","type":"exact"}],"termid":"GO:0015316"}


id: FYPO:0001876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the preferential localization of a protein to either the old or new spindle pole body is decreased during mitotic anaphase, and the protein is instead symmetrically localized to both SPBs.","definition_xrefs":["PMID:22419817","PMID:22119525","PomBase:mah","PMID:24920823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased asymmetric protein localization to old or new mitotic spindle pole body","termid":"FYPO:0001875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during anaphase, with protein symmetrically localized to both spindle pole bodies","synonyms":[{"name":"abnormally symmetric protein localization to mitotic SPB during anaphase","type":"exact"},{"name":"abnormally symmetric protein localization to mitotic spindle pole bodies during anaphase","type":"exact"},{"name":"abnormally symmetric protein localization to spindle pole bodies during mitotic anaphase","type":"exact"},{"name":"abolished asymmetric protein localization to old or new mitotic SPB","type":"related"},{"name":"decreased asymmetric protein localisation to old or new mitotic spindle pole body during anaphase, with protein symmetrically localised to both spindle pole bodies","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during anaphase, with protein symmetrically localized to both spindle pole bodies, during vegetative growth","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during mitotic anaphase, with protein symmetrically localized to both spindle pole bodies","type":"exact"},{"name":"reduced asymmetric protein localization to old or new mitotic spindle pole body during anaphase, with protein symmetrically localized to both spindle pole bodies","type":"exact"}],"termid":"FYPO:0001876"}


id: PBO:0030043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_cellular_response_to_iron","termid":"PBO:0030043"}


id: PBO:0045671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 intermediate chain 2","termid":"PBO:0045671"}


id: PBO:0041430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 82","termid":"PBO:0041430"}


id: FYPO:0002598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation during vegetative growth","synonyms":[{"name":"decreased histone H2A phosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced histone H2A phosphorylation","type":"exact"}],"termid":"FYPO:0002598"}


id: PBO:0032718
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_aseptate_vegetative_cell_with_cell_cycle_arrest_in_mitotic_metaphase","termid":"PBO:0032718"}


id: PBO:0085582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 7-aminocholesterol resistance; has seven potential membrane-spanning regions; expression is induced under both low-heme and low-oxygen conditions; member of the fungal lipid-translocating exporter (LTE) family of protein; RTA1 has a paralog, YLR046C, that arose from the whole genome duplication","termid":"PBO:0085582"}


id: GO:0004475
data:
  {"annotated_genes":["SJAG_00890","SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99185,112177],"is_not":false,"summary":null,"term":"GO:0004475"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-mannose 1-phosphate + GTP = diphosphate + GDP-alpha-D-mannose.","definition_xrefs":["RHEA:15229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00890":null,"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mannose-1-phosphate guanylyltransferase (GTP) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.7.7.13-RXN","Reactome:R-HSA-446221","KEGG_REACTION:R00885","EC:2.7.7.13"],"synonyms":[{"name":"GDP-mannose pyrophosphorylase activity","type":"related"},{"name":"GTP-mannose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:alpha-D-mannose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:mannose-1-phosphate guanylyltransferase activity","type":"exact"},{"name":"PIM-GMP (phosphomannose isomerase-guanosine 5'-diphospho-D-mannose pyrophosphorylase)","type":"related"},{"name":"guanosine 5'-diphospho-D-mannose pyrophosphorylase activity","type":"related"},{"name":"guanosine diphosphomannose pyrophosphorylase activity","type":"related"},{"name":"guanosine triphosphate-mannose 1-phosphate guanylyltransferase activity","type":"related"},{"name":"mannose 1-phosphate guanylyltransferase (guanosine triphosphate)","type":"related"},{"name":"mannose-1-phosphate guanylyltransferase activity","type":"broad"}],"termid":"GO:0004475","terms_by_termid":{"GO:0004475":null}}


id: PBO:0045462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein regulatory complex subunit 3","termid":"PBO:0045462"}


id: PBO:0062420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 62 pseudogene","termid":"PBO:0062420"}


id: PBO:0059361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 7","termid":"PBO:0059361"}


id: PATO:0001096
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001096 absolute force value (obsolete PATO:0001096)","termid":"PATO:0001096"}


id: PBO:0028072
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_spindle_assembly_checkpoint","termid":"PBO:0028072"}


id: PBO:0038660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACR pseudogene 1","termid":"PBO:0038660"}


id: PBO:0004704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc8 (predicted)","termid":"PBO:0004704"}


id: PBO:0074454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC related modular calcium binding 2","termid":"PBO:0074454"}


id: PBO:0000462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX domain protein","termid":"PBO:0000462"}


id: PBO:0043391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene","termid":"PBO:0043391"}


id: PBO:0003720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II and III subunit Rpc10","termid":"PBO:0003720"}


id: PBO:0083089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA binding protein with possible chromatin-reorganizing activity; involved in transcriptional activation, gene silencing, and DNA replication and repair","termid":"PBO:0083089"}


id: GO:0048867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a stem cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:isa_complete","CL:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"stem cell fate commitment","termid":"GO:0048865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell fate determination","termid":"GO:0048867"}


id: FYPO:0000074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of a drug than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete resistance to drug (obsolete FYPO:0000074)","synonyms":[{"name":"drug resistance","type":"exact"},{"name":"drug resistant","type":"exact"},{"name":"resistance to drug during vegetative growth","type":"exact"},{"name":"resistant to drugs","type":"exact"}],"termid":"FYPO:0000074"}


id: PBO:0071484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 25","termid":"PBO:0071484"}


id: PBO:0084635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for synthesis of diphthamide; diphthamide is a modified histidine residue of translation elongation factor 2 (Eft1p or Eft2p); not essential for viability; GFP-Dph5p fusion protein localizes to the cytoplasm","termid":"PBO:0084635"}


id: FYPO:0007152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to camphor. Cells stop growing (and may die) at a concentration of camphor that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to camphor","synonyms":[{"name":"hypersensitive to camphor","type":"exact"},{"name":"sensitive to camphor during mitotic cell cycle","type":"related"},{"name":"sensitive to camphor during vegetative growth","type":"exact"}],"termid":"FYPO:0007152"}


id: PBO:0050697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 12A","termid":"PBO:0050697"}


id: PBO:0041728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II gamma","termid":"PBO:0041728"}


id: PBO:0043448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 9","termid":"PBO:0043448"}


id: GO:0044781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a bacterial-type flagellum, a motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope which functions in cell motility.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"is_a","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacterial-type flagellum organization","termid":"GO:0044781"}


id: PBO:0062525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily T member 1 pseudogene","termid":"PBO:0062525"}


id: PBO:0071787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p14","termid":"PBO:0071787"}


id: PBO:0050309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 11","termid":"PBO:0050309"}


id: PBO:0083213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF YRF1-1/YDR545W","termid":"PBO:0083213"}


id: PBO:0087161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III largest subunit C160; part of core enzyme; similar to bacterial beta-prime subunit and to RPA190 and RPO21","termid":"PBO:0087161"}


id: GO:0018289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"molybdenum incorporation into metallo-sulfur cluster","synonyms":[{"name":"molybdenum incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018289"}


id: FYPO:0000326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the stable attachment of sister chromatids to microtubules emanating from opposite poles of the mitotic spindle during metaphase plate congression is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000337","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid biorientation","synonyms":[{"name":"abnormal sister chromatid biorientation during mitosis","type":"exact"},{"name":"abnormal sister chromatid biorientation during mitotic cell cycle","type":"related"},{"name":"abnormal sister chromatid biorientation during vegetative growth","type":"exact"}],"termid":"FYPO:0000326"}


id: GO:0008041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete storage protein of fat body (sensu Insecta) (obsolete GO:0008041)","synonyms":[{"name":"storage protein of fat body (sensu Insecta)","type":"exact"}],"termid":"GO:0008041"}


id: GO:0071853
data:
  {"annotated_genes":["SJAG_01888","SJAG_02718","SJAG_03646","SJAG_01017","SJAG_03444","SJAG_00667","SJAG_01171","SJAG_05001"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104162,107405,98045,85219,96245,84416,98046,90125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"}]},"cv_name":"biological_process","definition":"A cellular process that results in the breakdown of a fungal-type cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall organization","termid":"GO:0031505"},{"relation_name":"is_a","term_name":"cell wall disassembly","termid":"GO:0044277"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_02718":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"fungal-type cell wall disassembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071853","terms_by_termid":{"GO:1904541":null}}


id: PBO:0046554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 8, envelope","termid":"PBO:0046554"}


id: PBO:0074579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stannin","termid":"PBO:0074579"}


id: GO:0046784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of intronless viral mRNA from the host nucleus to the cytoplasm for translation.","definition_xrefs":["PMID:11598019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocation of molecules into host","termid":"GO:0044417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral mRNA export from host cell nucleus","synonyms":[{"name":"intronless viral mRNA export from host cell nucleus","type":"exact"},{"name":"intronless viral mRNA export from host nucleus","type":"related"},{"name":"intronless viral mRNA export out of nucleus","type":"exact"},{"name":"intronless viral mRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"intronless viral mRNA-nucleus export","type":"exact"}],"termid":"GO:0046784"}


id: PBO:0005238
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of staurosporine","termid":"PBO:0005238"}


id: PBO:0049626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 29","termid":"PBO:0049626"}


id: PBO:0048052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 1","termid":"PBO:0048052"}


id: PBO:0071267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L24","termid":"PBO:0071267"}


id: PBO:0038408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causal_agent_in_process","termid":"PBO:0038408"}


id: PBO:0005285
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential for RNA Silencing","termid":"PBO:0005285"}


id: PBO:0086781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and seamless GFP fusion proteins localize to the endoplasmic reticulum and mCherry fusion protein localizes to the vacuole","termid":"PBO:0086781"}


id: GO:2000924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"cellodextrin metabolic process","termid":"GO:2000889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cellodextrin metabolic process","synonyms":[{"name":"regulation of cellodextrin metabolism","type":"exact"}],"termid":"GO:2000924"}


id: PBO:0087285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal recognition particle (SRP) subunit (homolog of mammalian SRP54); contains the signal sequence-binding activity of SRP, interacts with the SRP RNA, and mediates binding of SRP to signal receptor; contains GTPase domain","termid":"PBO:0087285"}


id: PBO:0067738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 37","termid":"PBO:0067738"}


id: FYECO:0000141
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The experiment was carried out in vivo.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in vivo","termid":"FYECO:0000141"}


id: PBO:0067657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 834, pseudogene","termid":"PBO:0067657"}


id: FYPO:0003869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the amount of protein encoded by genes normally induced by exposure to hydrogen peroxide measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah","PMID:20133687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during G0","termid":"FYPO:0003866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased level of hydrogen peroxide-induced proteins during G0","synonyms":[{"name":"increased level of H2O2-induced proteins during G0","type":"exact"},{"name":"increased level of hydrogen peroxide-induced proteins during cell quiescence","type":"exact"},{"name":"increased level of hydrogen peroxide-induced proteins during quiescence","type":"exact"},{"name":"increased level of proteins expressed during cellular response to hydrogen peroxide during G0","type":"exact"},{"name":"increased level of proteins induced by hydrogen peroxide during G0","type":"exact"},{"name":"increased protein level of genes (normally) induced during H2O2 stress during G0","type":"exact"}],"termid":"FYPO:0003869"}


id: PBO:0029028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_pole_body_during_interphase","termid":"PBO:0029028"}


id: GO:0072158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a proximal tubule are generated and organized. The proximal tubule is a nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle. It has a brush border epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"part_of","term_name":"proximal tubule development","termid":"GO:0072014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal tubule morphogenesis","termid":"GO:0072158"}


id: MOD:00425
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom with a hydroxyl group.","definition_xrefs":["Unimod:35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated residue","synonyms":[{"name":"Hy1Res","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"Oxidation or Hydroxylation","type":"related"}],"termid":"MOD:00425"}


id: PBO:0058461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5190","termid":"PBO:0058461"}


id: PBO:0029459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_morphology","termid":"PBO:0029459"}


id: PBO:0042843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 47","termid":"PBO:0042843"}


id: GO:0033167
data:
  {"annotated_genes":["SJAG_04061","SJAG_02621","SJAG_02594"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84904,84959,114142],"is_not":false,"summary":null,"term":"GO:0033167"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains members of the Argonaute family of proteins, additional protein subunits, and duplex siRNA; required for heterochromatin assembly and siRNA generation. Possibly involved in the conversion of ds siRNA to ss siRNA.","definition_xrefs":["GOC:vw","PMID:17310250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi effector complex","termid":"GO:0031332"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02594":null,"SJAG_02621":null,"SJAG_04061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"ARC complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"argonaute siRNA chaperone complex","type":"exact"}],"termid":"GO:0033167","terms_by_termid":{"GO:0033167":null}}


id: GO:0015744
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"},{"annotations":[97756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071422"}]},"cv_name":"biological_process","definition":"The directed movement of succinate, the dianion of ethane dicarboxylic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"succinate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015744","terms_by_termid":{"GO:0071422":null,"GO:0098720":null}}


id: PBO:0003567
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unsupported by transcription data","termid":"PBO:0003567"}


id: PBO:0091804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, non-coding RNA (predicted)","termid":"PBO:0091804"}


id: PBO:0071254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 95","termid":"PBO:0071254"}


id: PBO:0080263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 26 pseudogene","termid":"PBO:0080263"}


id: PR:Q09911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC30D11.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30D11.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.14c","synonyms":[{"name":"Spom972h-SPAC30D11.14c","type":"exact"}],"termid":"PR:Q09911"}


id: GO:0170020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific odorant has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:21857978","PMID:24661599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olfactory receptor activity","termid":"GO:0004984"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0038023","GO:0003674"],"is_obsolete":false,"name":"ionotropic olfactory receptor activity","termid":"GO:0170020"}


id: PBO:0074888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 65","termid":"PBO:0074888"}


id: PBO:0034576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_transport_during_meiosis","termid":"PBO:0034576"}


id: PBO:0044085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A5","termid":"PBO:0044085"}


id: PBO:0047563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF14 antisense RNA 2","termid":"PBO:0047563"}


id: PBO:0051658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interphotoreceptor matrix proteoglycan 1","termid":"PBO:0051658"}


id: PBO:0085452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Possible rhomboid protease; has similarity to eukaryotic rhomboid proteases including Pcp1p","termid":"PBO:0085452"}


id: GO:0030311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly-N-acetyllactosamine, a carbohydrate composed of N-acetyllactosamine repeats (Gal-beta-1,4-GlcNAc-beta-1,3)n.","definition_xrefs":["PMID:9405606","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan biosynthetic process","termid":"GO:0006023"},{"relation_name":"is_a","term_name":"poly-N-acetyllactosamine metabolic process","termid":"GO:0030309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly-N-acetyllactosamine biosynthetic process","synonyms":[{"name":"poly-N-acetyllactosamine anabolism","type":"exact"},{"name":"poly-N-acetyllactosamine biosynthesis","type":"exact"},{"name":"poly-N-acetyllactosamine formation","type":"exact"},{"name":"poly-N-acetyllactosamine synthesis","type":"exact"}],"termid":"GO:0030311"}


id: PBO:0076364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 1","termid":"PBO:0076364"}


id: PBO:0066612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 1 pseudogene 3","termid":"PBO:0066612"}


id: PBO:0041604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CA15 pseudogene 1","termid":"PBO:0041604"}


id: PBO:0027880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_H4-K20_monomethylation","termid":"PBO:0027880"}


id: PBO:0080952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBED5 antisense RNA 1","termid":"PBO:0080952"}


id: PBO:0089891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Dip5","termid":"PBO:0089891"}


id: PBO:0025550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Psi1","termid":"PBO:0025550"}


id: PBO:0082375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor from ATF/CREB family involved in stress-responsive regulatory network; mediates transcriptional activation of NCE103 in response to low CO2 levels; proposed to be a regulator of oleate responsive genes; involved in utilization of non-optimal carbon sources and chromosome stability; relocalizes to the cytosol in response to hypoxia; CST6 has a paralog, ACA1, that arose from the whole genome duplication","termid":"PBO:0082375"}


id: GO:1902256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph","GOC:TermGenie","PMID:16839542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"regulates","term_name":"apoptotic process involved in outflow tract morphogenesis","termid":"GO:0003275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process involved in outflow tract morphogenesis","synonyms":[{"name":"regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"}],"termid":"GO:1902256"}


id: GO:0071831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a intermediate-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich lipoprotein particle clearance","termid":"GO:0071830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate-density lipoprotein particle clearance","synonyms":[{"name":"IDL clearance","type":"exact"}],"termid":"GO:0071831"}


id: PBO:0079026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 9-1","termid":"PBO:0079026"}


id: PBO:0047754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focadhesin","termid":"PBO:0047754"}


id: PBO:0075129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein U4/U6.U5 subunit 27","termid":"PBO:0075129"}


id: PBO:0045830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 20","termid":"PBO:0045830"}


id: PBO:0051691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 antisense RNA 1","termid":"PBO:0051691"}


id: PBO:0045887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 epsilon 1 pseudogene 1","termid":"PBO:0045887"}


id: PBO:0034099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_branching_relationship_with","termid":"PBO:0034099"}


id: GO:0018486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methyl ethyl ketone + O2 = H2O + ethyl acetate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-butanone oxidase activity (obsolete GO:0018486)","termid":"GO:0018486"}


id: PBO:0062665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily G member 1","termid":"PBO:0062665"}


id: PBO:0041211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper and W2 domains 2","termid":"PBO:0041211"}


id: PBO:0058653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6781","termid":"PBO:0058653"}


id: PBO:0064343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin A1","termid":"PBO:0064343"}


id: GO:0001931
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively.","definition_xrefs":["PMID:12714569","GOC:add","PMID:12787750","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"},{"relation_name":"part_of","term_name":"cell trailing edge","termid":"GO:0031254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"uropod","synonyms":[{"name":"distal pole complex","type":"related"},{"name":"retractile pole","type":"related"},{"name":"uropodium","type":"exact"}],"termid":"GO:0001931"}


id: FYPO:0005253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tamoxifen than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to tamoxifen","synonyms":[{"name":"resistance to tamoxifen during mitotic cell cycle","type":"related"},{"name":"resistance to tamoxifen during vegetative growth","type":"exact"},{"name":"resistant to tamoxifen","type":"exact"}],"termid":"FYPO:0005253"}


id: PBO:0039663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit beta 1","termid":"PBO:0039663"}


id: PBO:0091879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER sterol deacetylase Say1","termid":"PBO:0091879"}


id: FYPO:0001494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is elongated, and contains more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multiseptate vegetative cell","termid":"FYPO:0000223"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0000032","FYPO:0000631","FYPO:0000005","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated multiseptate vegetative cell","synonyms":[{"name":"elongated inviable multiseptate cell during vegetative growth","type":"exact"},{"name":"elongated multiseptate inviable vegetative cell","type":"exact"},{"name":"inviable elongated multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; elongated multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0001494"}


id: PBO:0031699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_fusion_during_mating","termid":"PBO:0031699"}


id: PR:O59699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC36.02c gene.","definition_xrefs":["UniProtKB:O59699","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C36.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.02c","synonyms":[{"name":"Spom972h-SPBC36.02c","type":"exact"}],"termid":"PR:O59699"}


id: PBO:0070024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1321, pseudogene","termid":"PBO:0070024"}


id: PBO:0067680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 865, pseudogene","termid":"PBO:0067680"}


id: PBO:0090022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unknown protein, may bind replication origins Abp2","termid":"PBO:0090022"}


id: PBO:0072066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 4","termid":"PBO:0072066"}


id: PBO:0047470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucose kinase","termid":"PBO:0047470"}


id: FYPO:0004094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell during the meiotic cell cycle. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization during meiotic cell cycle","synonyms":[{"name":"abnormal cellular protein localisation during meiotic cell cycle","type":"exact"},{"name":"abnormal cellular protein localization during meiotic cell cycle","type":"exact"},{"name":"abnormal protein localisation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004094"}


id: PBO:0080885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yrdC N(6)-threonylcarbamoyltransferase domain containing pseudogene 1","termid":"PBO:0080885"}


id: PBO:0082073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoserine aminotransferase; catalyzes the formation of phosphoserine from 3-phosphohydroxypyruvate, required for serine and glycine biosynthesis; regulated by the general control of amino acid biosynthesis mediated by Gcn4p; protein abundance increases in response to DNA replication stress","termid":"PBO:0082073"}


id: GO:0002365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a pro-T cell becomes committed to becoming a gamma-delta T cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell lineage commitment","termid":"GO:0002360"},{"relation_name":"part_of","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell lineage commitment","synonyms":[{"name":"gamma-delta T lymphocyte lineage commitment","type":"exact"},{"name":"gamma-delta T-cell lineage commitment","type":"exact"},{"name":"gamma-delta T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002365"}


id: PBO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hamartin","termid":"PBO:0000526"}


id: GO:0008939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6-dimethylbenzimidazole + nicotinate D-ribonucleotide = alpha-ribazole 5'-phosphate + H+ + nicotinate.","definition_xrefs":["EC:2.4.2.21","RHEA:11196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity","secondary_identifiers":["MetaCyc:DMBPPRIBOSYLTRANS-RXN","KEGG_REACTION:R04148"],"synonyms":[{"name":"CobT","type":"related"},{"name":"N(1)-alpha-phosphoribosyltransferase activity","type":"related"},{"name":"N1-alpha-phosphoribosyltransferase activity","type":"related"},{"name":"nicotinate mononucleotide (NaMN):5,6-dimethylbenzimidazole phosphoribosyltransferase activity","type":"related"},{"name":"nicotinate mononucleotide-dimethylbenzimidazole phosphoribosyltransferase activity","type":"related"},{"name":"nicotinate ribonucleotide:benzimidazole (adenine) phosphoribosyltransferase activity","type":"related"},{"name":"nicotinate-nucleotide:5,6-dimethylbenzimidazole phospho-D-ribosyltransferase activity","type":"related"},{"name":"nicotinate-nucleotide:dimethylbenzimidazole phospho-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0008939"}


id: PBO:0077911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 2","termid":"PBO:0077911"}


id: PBO:0091245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD binding oxidoreductase, implicated in cellular detoxification","termid":"PBO:0091245"}


id: GO:0070439
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptional repressor complex that contains a heterodimer of the bHLH-ZIP proteins Mad and Max, plus mSin3A, a homolog of the yeast Sin3p.","definition_xrefs":["PMID:7889570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Mad-Max-mSin3A complex","termid":"GO:0070439"}


id: PR:P04688
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nda2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P04688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha-1 chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.15c","synonyms":[{"name":"Spom972h-nda2","type":"exact"}],"termid":"PR:P04688"}


id: GO:0097228
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The segment of the sperm flagellum where the mitochondrial sheath ends, and the outer dense fibers (ODFs) associated with outer axonemal doublets 3 and 8 are replaced by the 2 longitudinal columns of the fibrous sheath (FS) which run the length of the principal piece and are stabilized by circumferential ribs. The principal piece makes up ~2/3 of the length of the sperm flagellum and is defined by the presence of the FS and of only 7 (rather than 9) ODFs which taper and then terminate near the distal end of the principal piece.","definition_xrefs":["MP:0009836","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm principal piece","termid":"GO:0097228"}


id: SO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Dictyostelium intermediate repeat sequence (DIRS) retrotransposons are members of the YR_retrotransposon (SO:0002286) superfamily with the following protein domains: RT, RH, YR, and MT. RT is a reverse transcriptase. RH is RNAse H. YR is tyrosine recombinase. MT is DNA N-6-adenine-methyltransferase.","definition_xrefs":["PMID:24086727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"YR_retrotransposon","termid":"SO:0002286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRS_YR_retrotransposon","synonyms":[{"name":"DIRS YR retrotransposon","type":"exact"},{"name":"DIRS retrotransposon","type":"exact"},{"name":"RYD retrotransposon","type":"exact"}],"termid":"SO:0002287"}


id: GO:1990856
data:
  {"annotated_genes":["SJAG_00466","SJAG_03629"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93344,101500],"is_not":false,"summary":null,"term":"GO:1990856"}]},"cv_name":"molecular_function","definition":"Binding to methionine-initiator methionine tRNA.","definition_xrefs":["GOC:hjd","ISBN:9781555810733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA binding","termid":"GO:0000049"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00466":null,"SJAG_03629":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"methionyl-initiator methionine tRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990856","terms_by_termid":{"GO:1990856":null}}


id: PBO:0065675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type U","termid":"PBO:0065675"}


id: PBO:0013057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudokinase Tea5","termid":"PBO:0013057"}


id: PBO:0065064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteoglycan 2, pro eosinophil major basic protein","termid":"PBO:0065064"}


id: PBO:0087376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Starch hydrolysis","termid":"PBO:0087376"}


id: PBO:0056963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 23a","termid":"PBO:0056963"}


id: PBO:0056806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 3","termid":"PBO:0056806"}


id: PBO:0078058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 48","termid":"PBO:0078058"}


id: PBO:0059015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 2","termid":"PBO:0059015"}


id: PBO:0061993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily D member 2","termid":"PBO:0061993"}


id: PBO:0060860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA-related kinase 4 pseudogene 2","termid":"PBO:0060860"}


id: GO:1900791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving shamixanthone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"shamixanthone metabolic process","synonyms":[{"name":"shamixanthone metabolism","type":"exact"}],"termid":"GO:1900791"}


id: PBO:0003358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class I) Clr6","termid":"PBO:0003358"}


id: GO:0070419
data:
  {"annotated_genes":["SJAG_04199","SJAG_02527","SJAG_02237"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96031,112415,109987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032807"}]},"cv_name":"cellular_component","definition":"A protein complex that plays a role in DNA double-strand break repair via nonhomologous end joining. Such complexes typically contain a specialized DNA ligase (e.g. Lig4 in eukaryotes) and one or more proteins that bind to DNA ends.","definition_xrefs":["GOC:mah","PMID:17072889","PMID:17938628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02237":null,"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nonhomologous end joining complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NHEJ complex","type":"exact"},{"name":"non-homologous end joining complex","type":"exact"}],"termid":"GO:0070419","terms_by_termid":{"GO:0032807":null}}


id: GO:0097518
data:
  {"annotated_genes":["SJAG_00938","SJAG_04887","SJAG_02864"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104219,115477,94391,91385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070648"}]},"cv_name":"cellular_component","definition":"An actin filament bundle in which the filaments are tightly packed (approximately 10-20 nm apart) and oriented with the same polarity.","definition_xrefs":["GOC:cjm","GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle","termid":"GO:0032432"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"parallel actin filament bundle","references_by_uniquename":{"GO_REF:0000107":null,"PMID:36148799":null},"termid":"GO:0097518","terms_by_termid":{"GO:0070648":null}}


id: GO:0042289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex class II molecule; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein binding","termid":"GO:0042287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"MHC class II protein binding","synonyms":[{"name":"major histocompatibility complex class II binding","type":"exact"},{"name":"major histocompatibility complex class II ligand","type":"narrow"}],"termid":"GO:0042289"}


id: GO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that controls blood pressure by sensing the amount of stretch occurring in the atria.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart process","termid":"GO:0003015"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by atrial baroreceptor feedback","synonyms":[{"name":"atrial baroreceptor regulation of systemic arterial blood pressure","type":"exact"},{"name":"atrial control of blood pressure","type":"related"},{"name":"atrial low pressure baroreceptor regulation of blood pressure","type":"exact"},{"name":"atrial reflex","type":"related"}],"termid":"GO:0002015"}


id: PBO:0001041
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Pmk1","termid":"PBO:0001041"}


id: MOD:01750
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01750"}


id: PBO:0065506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine phosphatase","termid":"PBO:0065506"}


id: GO:0046665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of the amnioserosa, an epithelium that occupies a hole in the embryonic dorsal epidermis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amnioserosa maintenance","termid":"GO:0046665"}


id: GO:0007447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that results in defined areas of the imaginal disc that will undergo specific cell differentaiton. Imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult appendages (legs, antennae, wings, etc.) during metamorphosis from larval to adult form.","definition_xrefs":["GOC:jid","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc pattern formation","termid":"GO:0007447"}


id: PBO:0052519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 32","termid":"PBO:0052519"}


id: GO:0050213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-alpha-pregnan-3,20-dione + NADP+ = progesterone + NADPH.","definition_xrefs":["MetaCyc:PROGESTERONE-5-ALPHA-REDUCTASE-RXN","EC:1.3.1.30"],"gene_count":0,"genotype_count":0,"name":"obsolete progesterone 5-alpha-reductase activity (obsolete GO:0050213)","synonyms":[{"name":"5alpha-pregnan-3,20-dione:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"delta4-steroid 5alpha-reductase (progesterone)","type":"related"},{"name":"progesterone 5a-reductase activity","type":"exact"},{"name":"progesterone 5alpha-reductase activity","type":"related"},{"name":"steroid 5-alpha-reductase activity","type":"broad"}],"termid":"GO:0050213"}


id: PBO:0054856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2270","termid":"PBO:0054856"}


id: PBO:0075679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SQLE divergent transcript","termid":"PBO:0075679"}


id: PBO:0012540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_development_of","termid":"PBO:0012540"}


id: FYPO:0003801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at an origin of replication is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased chromatin binding at replication origin","synonyms":[{"name":"decreased chromatin binding at origin of replication","type":"exact"},{"name":"reduced chromatin binding at replication origin","type":"exact"}],"termid":"FYPO:0003801"}


