# terms

id: PBO:0113129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eukaryotic translation elongation factor 2 (eEF2, EF-2); also encoded by EFT1; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin; EFT2 has a paralog, EFT1, that arose from the whole genome duplication","termid":"PBO:0113129"}


id: GO:0044424
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular part (obsolete GO:0044424)","termid":"GO:0044424"}


id: PATO:0000834
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000834 relative visual threshold value (obsolete PATO:0000834)","termid":"PATO:0000834"}


id: PBO:0059198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X5, pseudogene","termid":"PBO:0059198"}


id: PBO:0053907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1201","termid":"PBO:0053907"}


id: GO:0006638
data:
  {"annotated_genes":["SJAG_04041","SJAG_02543","SJAG_02683","SJAG_03604","SJAG_03162","SJAG_02907","SJAG_02100","SJAG_02487","SJAG_02089","SJAG_01036","SJAG_02763","SJAG_03609"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046464"},{"annotations":[110280,108157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046339"},{"annotations":[90023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046461"},{"annotations":[87564,108160,86154,110283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019432"},{"annotations":[113657,87993,90137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"},{"annotations":[87994,110884,89770,86232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving neutral lipids, lipids only soluble in solvents of very low polarity.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular lipid metabolic process","termid":"GO:0044255"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02100":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02683":null,"SJAG_02763":null,"SJAG_02907":null,"SJAG_03162":null,"SJAG_03604":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"neutral lipid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"neutral lipid metabolism","type":"exact"}],"termid":"GO:0006638","terms_by_termid":{"GO:0006642":null,"GO:0019432":null,"GO:0019433":null,"GO:0046339":null,"GO:0046461":null,"GO:0046464":null}}


id: GO:0090137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an epithelial cell to another epithelial cell via adhesion molecules that contributes to epithelium migration.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell-cell adhesion","termid":"GO:0090136"},{"relation_name":"part_of","term_name":"epithelium migration","termid":"GO:0090132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:0090137"}


id: PBO:0059075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 3 pseudogene 1","termid":"PBO:0059075"}


id: PBO:0035857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_dimethylation_during_vegetative_growth","termid":"PBO:0035857"}


id: PBO:0087976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase that catalyzes final step in tRNA splicing: the transfer of the 2'-PO(4) from the splice junction to NAD(+) to form ADP-ribose 1''-2''cyclic phosphate and nicotinamide","termid":"PBO:0087976"}


id: PBO:0086004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YOR062C has a paralog, YKR075C, that arose from the whole genome duplication","termid":"PBO:0086004"}


id: PBO:0067540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 685, pseudogene","termid":"PBO:0067540"}


id: PR:O74761
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA primase large subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10537:SF0","OMA:SCHPO03657","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA primase large subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.06","secondary_identifiers":["UniProtKB:O74761"],"synonyms":[{"name":"Spom972h-PRIM2","type":"exact"}],"termid":"PR:O74761"}


id: GO:0062147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + chloride + H+ + L-lysine + O2 = 4-chloro-L-lysine + CO2 + H2O + succinate.","definition_xrefs":["PMID:30867596","RHEA:59884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated","termid":"GO:0050498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-lysine 4-chlorinase activity","termid":"GO:0062147"}


id: PBO:0091639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular phospholipase","termid":"PBO:0091639"}


id: PBO:0028873
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_poly(A)_tail_length","termid":"PBO:0028873"}


id: GO:0102629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: patuletin + S-adenosyl-L-methionine = quercetagetin 3',6-dimethyl ether + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"patuletin 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15534"],"termid":"GO:0102629"}


id: GO:2000799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amniotic stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal stem cell differentiation","termid":"GO:2000741"},{"relation_name":"is_a","term_name":"regulation of amniotic stem cell differentiation","termid":"GO:2000797"},{"relation_name":"positively_regulates","term_name":"amniotic stem cell differentiation","termid":"GO:0097086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amniotic stem cell differentiation","termid":"GO:2000799"}


id: PBO:0057616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1182","termid":"PBO:0057616"}


id: PBO:0012015
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the phenotypes attributed to ima1 in PMID:18692466 have since been attributed to a truncated allele of SPAC11E3.05","termid":"PBO:0012015"}


id: PBO:0062364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily X member 1","termid":"PBO:0062364"}


id: GO:1905614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of developmental vegetative growth.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11606552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of developmental vegetative growth","termid":"GO:1905613"},{"relation_name":"negatively_regulates","term_name":"developmental vegetative growth","termid":"GO:0080186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of developmental vegetative growth","synonyms":[{"name":"down regulation of developmental vegetative growth","type":"exact"},{"name":"down-regulation of developmental vegetative growth","type":"exact"},{"name":"downregulation of developmental vegetative growth","type":"exact"},{"name":"inhibition of developmental vegetative growth","type":"narrow"}],"termid":"GO:1905614"}


id: PBO:0027150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_serine_level","termid":"PBO:0027150"}


id: GO:0033207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an acceptor molecule, forming a beta-1,4 linkage.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"beta-1,4-N-acetylgalactosaminyltransferase activity","synonyms":[{"name":"beta-1,4-GalNAc transferase activity","type":"exact"}],"termid":"GO:0033207"}


id: PBO:0008497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med15","termid":"PBO:0008497"}


id: GO:1904820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a peritoneum over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GO_REF:0000094","PMID:15840053","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serous membrane development","termid":"GO:1904817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peritoneum development","synonyms":[{"name":"peritonaeum development","type":"related"}],"termid":"GO:1904820"}


id: GO:0060572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which a bud forms from an epithelial sheet. A bud is a protrusion that forms form the sheet by localized folding.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelial bud","termid":"GO:0060572"}


id: SO:0001102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with tungsten ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_tungsten_ion_contact_site","secondary_identifiers":["BS:00143"],"synonyms":[{"name":"W_contact_site","type":"exact"},{"name":"polypeptide tungsten ion contact site","type":"exact"}],"termid":"SO:0001102"}


id: PBO:0055445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2876","termid":"PBO:0055445"}


id: PBO:0071827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 22","termid":"PBO:0071827"}


id: PBO:0077824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3C","termid":"PBO:0077824"}


id: GO:2000951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xyloglucan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xyloglucan metabolic process","termid":"GO:2000948"},{"relation_name":"is_a","term_name":"regulation of hemicellulose catabolic process","termid":"GO:2000988"},{"relation_name":"regulates","term_name":"xyloglucan catabolic process","termid":"GO:2000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of xyloglucan catabolic process","synonyms":[{"name":"regulation of xyloglucan catabolism","type":"exact"}],"termid":"GO:2000951"}


id: PBO:0055039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2454","termid":"PBO:0055039"}


id: GO:1905212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast chemotaxis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:8760137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of fibroblast chemotaxis","termid":"GO:1905210"},{"relation_name":"positively_regulates","term_name":"fibroblast chemotaxis","termid":"GO:1990956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast chemotaxis","synonyms":[{"name":"activation of fibroblast chemotaxis","type":"narrow"},{"name":"up regulation of fibroblast chemotaxis","type":"exact"},{"name":"up-regulation of fibroblast chemotaxis","type":"exact"},{"name":"upregulation of fibroblast chemotaxis","type":"exact"}],"termid":"GO:1905212"}


id: PBO:0073850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A3 3' UTR overlapping transcript 1","termid":"PBO:0073850"}


id: PBO:0054544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1944","termid":"PBO:0054544"}


id: PBO:0001815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDR subfamily","termid":"PBO:0001815"}


id: PBO:0111910
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domains","termid":"PBO:0111910"}


id: GO:0048209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or destination of vesicle-mediated transport to, from or within the Golgi apparatus.","definition_xrefs":["PMID:10219233","GOC:jid","GOC:mah","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vesicle targeting, to, from or within Golgi","synonyms":[{"name":"regulation of Golgi vesicle targeting","type":"exact"}],"termid":"GO:0048209"}


id: PBO:0024854
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cowden syndrome","termid":"PBO:0024854"}


id: PBO:0076003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STIM1 antisense RNA 1","termid":"PBO:0076003"}


id: PBO:0046423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A7","termid":"PBO:0046423"}


id: GO:0110031
data:
  {"annotated_genes":["SJAG_04287","SJAG_03854","SJAG_00364","SJAG_02771","SJAG_04280"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107658,112101],"is_not":false,"summary":null,"term":"GO:0110031"},{"annotations":[87532,102703,112154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"}]},"cv_name":"biological_process","definition":"Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to MI phase of the meiotic cell cycle.","definition_xrefs":["PMID:25492408","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G2/MI transition of meiotic cell cycle","termid":"GO:0110030"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle phase transition","termid":"GO:1901994"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle G2/M phase transition","termid":"GO:1902750"},{"relation_name":"negatively_regulates","term_name":"G2/MI transition of meiotic cell cycle","termid":"GO:0008315"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02771":null,"SJAG_03854":null,"SJAG_04280":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of G2/MI transition of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110031","terms_by_termid":{"GO:0033315":null,"GO:0110031":null}}


id: GO:1902487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a non-growing cell tip.","definition_xrefs":["PMID:23041194","GOC:TermGenie","PMID:21652630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to non-growing cell tip","synonyms":[{"name":"protein localisation in non-growing cell tip","type":"exact"},{"name":"protein localisation to non-growing cell tip","type":"exact"},{"name":"protein localization in non-growing cell tip","type":"exact"}],"termid":"GO:1902487"}


id: MOD:00563
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an N-acetylaminogalactose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminogalactosylated","termid":"MOD:00734"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-acetylaminogalactosylated residue","synonyms":[{"name":"GalNAcRes","type":"exact"},{"name":"HexNAc","type":"related"}],"termid":"MOD:00563"}


id: GO:0031853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nociceptin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opioid receptor binding","termid":"GO:0031628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nociceptin receptor binding","synonyms":[{"name":"nociceptin receptor ligand","type":"narrow"}],"termid":"GO:0031853"}


id: GO:0009799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of an organism's body plan or part of an organism such that a similar arrangement in form and relationship of parts around a common axis, or around each side of a plane is created.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of symmetry","synonyms":[{"name":"determination of symmetry","type":"exact"}],"termid":"GO:0009799"}


id: PBO:0087167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C37","termid":"PBO:0087167"}


id: PR:000085729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-9 but not phosphorylated on Ser-10. Example: UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291.","definition_xrefs":["PMID:19362535","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me:(K9),UnPhos(S10)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PRO_0000221366, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K9-methylated and unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K9MeUnPhos:1","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"related"},{"name":"hht1/Me:(K9),UnPhos(S10)","type":"exact"}],"termid":"PR:000085729"}


id: PR:O13845
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 39 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein rsd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.07c","secondary_identifiers":["UniProtKB:O13845"],"synonyms":[{"name":"Spom972h-RBM39","type":"exact"}],"termid":"PR:O13845"}


id: GO:0003329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a pancreatic PP cell fate and its capacity to differentiate into a pancreatic PP cell. A pancreatic polypeptide-producing cell is a cell in the pancreas that produces pancreatic polypeptide.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"pancreatic PP cell differentiation","termid":"GO:0003312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic PP cell fate commitment","termid":"GO:0003329"}


id: GO:0010162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A dormancy process in which dormancy (sometimes called a dormant state) is induced, maintained or broken in a seed. Seed dormancy is a suspension of most physiological activity and growth in a seed, including the embryo contained therein, that can be reactivated. It often requires special conditions for reactivation, such as specific temperature, scarification, or leaching of inhibitors.","definition_xrefs":["PO_REF:00009","GOC:PO_curators","ISBN:9781405139830","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed dormancy process","secondary_identifiers":["Wikipedia:Seed#Seed_dormancy_and_protection"],"synonyms":[{"name":"seed dormancy","type":"related"}],"termid":"GO:0010162"}


id: FYPO:0005801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of one or more proteins within the plasma membrane of the cell tip occurs more slowly than normal.","definition_xrefs":["PMID:25837586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein movement within plasma membrane during vegetative growth","termid":"FYPO:0005800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of protein movement within plasma membrane at cell tip","synonyms":[{"name":"decreased rate of protein movement within plasma membrane at cell tip during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein movement within plasma membrane at cell tip during vegetative growth","type":"exact"},{"name":"reduced rate of protein movement within plasma membrane at cell tip","type":"exact"},{"name":"slow protein movement within plasma membrane at cell tip","type":"exact"}],"termid":"FYPO:0005801"}


id: PBO:0018234
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory chain defects","termid":"PBO:0018234"}


id: PBO:0061609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear distribution C, dynein complex regulator","termid":"PBO:0061609"}


id: FYPO:0001203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype that reflects increased occurrence of coflocculation. In coflocculation, yeast cells coaggregate with cells of another species, usually bacteria.","definition_xrefs":["PMID:11472912","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"coflocculating cells","synonyms":[{"name":"co-flocculating cells","type":"exact"},{"name":"increased coflocculation","type":"exact"}],"termid":"FYPO:0001203"}


id: GO:0008328
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand-gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex.","definition_xrefs":["PMID:20716669","PMID:34753794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel complex","termid":"GO:0034702"},{"relation_name":"is_a","term_name":"neurotransmitter receptor complex","termid":"GO:0098878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"ionotropic glutamate receptor complex","termid":"GO:0008328"}


id: SO:0002147
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 11th residue (a lysine), from the start of the H2AZ histone protein is acetylated.","definition_xrefs":["PMID:19385636","PMID:27087541","PMID:24316985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2AZ_acetylation_site","termid":"SO:0002144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AZK11_acetylation_site","synonyms":[{"name":"H2A.ZK11ac","type":"exact"},{"name":"H2AZK11 acetylation site","type":"exact"},{"name":"H2AZK11ac","type":"exact"}],"termid":"SO:0002147"}


id: PBO:0072241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 16","termid":"PBO:0072241"}


id: PBO:0058213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4505","termid":"PBO:0058213"}


id: PBO:0079508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 6","termid":"PBO:0079508"}


id: PBO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-expressed with adjacent gene","termid":"PBO:0000164"}


id: PBO:0087953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination and ribosome biogenesis factor; ATP binding cassette protein that cosediments with polysomes and is required for biogenesis of the small ribosomal subunit; Asn/Gln-rich rich region supports [NU+] prion formation and susceptibility to [PSI+] prion induction","termid":"PBO:0087953"}


id: GO:0061790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial attachment of a dense core granule membrane to the plasma membrane.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:26575293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"},{"relation_name":"part_of","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0140056","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"dense core granule docking","termid":"GO:0061790"}


id: GO:0060275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The homeostatic process in which a population of cells changes its metabolic activity resulting in the rate of death in the population equaling the rate of reproduction in response to limited nutrients in the environment.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"},{"relation_name":"is_a","term_name":"maintenance of stationary phase","termid":"GO:0060274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of stationary phase in response to starvation","termid":"GO:0060275"}


id: GO:0170034
data:
  {"annotated_genes":["SJAG_02841","SJAG_03985","SJAG_04549","SJAG_03152","SJAG_01574","SJAG_01466","SJAG_04145","SJAG_02972","SJAG_04098","SJAG_04149","SJAG_00432","SJAG_00592","SJAG_04425","SJAG_01880","SJAG_01630","SJAG_03881","SJAG_04054","SJAG_04964","SJAG_04459","SJAG_00412","SJAG_04449","SJAG_01019","SJAG_03614","SJAG_03102","SJAG_04577","SJAG_00582","SJAG_02388","SJAG_01404","SJAG_00419","SJAG_00495","SJAG_00518","SJAG_00660","SJAG_04652","SJAG_00248","SJAG_00635","SJAG_03055","SJAG_01592","SJAG_00309","SJAG_01461","SJAG_03243","SJAG_00502","SJAG_00714","SJAG_00359","SJAG_03914","SJAG_01955","SJAG_03124","SJAG_03712","SJAG_03141","SJAG_02313","SJAG_00120","SJAG_00392","SJAG_01137","SJAG_02832","SJAG_03306","SJAG_04305","SJAG_02450","SJAG_01346","SJAG_03562","SJAG_00636","SJAG_01766","SJAG_03775","SJAG_03671","SJAG_04747","SJAG_02791","SJAG_04042","SJAG_00881","SJAG_04688","SJAG_02309","SJAG_01061","SJAG_02293","SJAG_03266","SJAG_00395","SJAG_02290","SJAG_04953","SJAG_03457","SJAG_00869","SJAG_02689","SJAG_00695","SJAG_00234","SJAG_00832","SJAG_03312","SJAG_02400","SJAG_06635","SJAG_00283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106600,107182,64694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[114453,106561,102602,107170,88855,108002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006526"},{"annotations":[99551,94277,94269,108003,98720,114454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[98265,106889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006529"},{"annotations":[107909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[107910,83981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[97990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[91602,92999,97991,106601,105555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[90379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"},{"annotations":[90309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[90591,87404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[102074,108064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[98266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[107326,113807,97631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[100924,90854,103028,93151,111106,98409,103959,106507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"},{"annotations":[106602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[102266,96928,86798,106171,99400,106531,109356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"},{"annotations":[96770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[110040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[96101,91675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[96756,108527,103099,88749,85899,95115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[95116,103100,88750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"},{"annotations":[104704,85959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[102863,86993,97883,96262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"},{"annotations":[113000,88315,96365,106238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"},{"annotations":[89081,86468,92464,92786,97302,98029,105794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009085"},{"annotations":[105795,92787,109549,86469,97303,98030,89082,92465,94456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[111871,102075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009089"},{"annotations":[107184,111872,102076,97993,98831,94633,86146,108065,92752,99703,94519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[99733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052707"},{"annotations":[86994,96263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006561"},{"annotations":[102077,108066,96939,106768,111873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"},{"annotations":[85960,110897,94457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definiti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chemical reactions and pathways resulting in the formation of L-amino acids, the L-enantiomers of amino acids.","definition_xrefs":["GOC:edw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic 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id: FYPO:0001729
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-cysteine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular cysteine level","termid":"FYPO:0001726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal vacuolar cysteine level","synonyms":[{"name":"normal level of cysteine in vacuole","type":"exact"},{"name":"normal vacuolar L-cysteine level","type":"exact"},{"name":"normal vacuolar cysteine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar cysteine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001729"}


id: GO:0003030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a hydrogen ion stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hydrogen ion","termid":"GO:0003030"}


id: GO:0061865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The basement membrane constituent secretion in which there is a restriction or targeting of basement membrane proteins for controlled release on the basal side of polarized epithelium.","definition_xrefs":["PMID:26610918","PMID:28228250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basement membrane constituent secretion","termid":"GO:0061864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"polarized secretion of basement membrane proteins in epithelium","termid":"GO:0061865"}


id: GO:0003289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structure of an atrial septum primum is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septum morphogenesis","termid":"GO:0060413"},{"relation_name":"part_of","term_name":"septum primum development","termid":"GO:0003284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial septum primum morphogenesis","termid":"GO:0003289"}


id: PBO:0074303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1B-SULT1A4 readthrough (NMD candidate)","termid":"PBO:0074303"}


id: PBO:0040483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 3 like","termid":"PBO:0040483"}


id: PBO:0074524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA B2","termid":"PBO:0074524"}


id: PBO:0015266
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosidase 2 Beta Subunit","termid":"PBO:0015266"}


id: MOD:00786
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one or more (2)H deuterium atoms for (1)H protium atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterium substituted residue","synonyms":[{"name":"D(H)Res","type":"exact"}],"termid":"MOD:00786"}


id: PBO:0071510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 13","termid":"PBO:0071510"}


id: PBO:0066277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member A, pseudogene","termid":"PBO:0066277"}


id: GO:0061402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a pH stimulus with pH < 7.","definition_xrefs":["GOC:go_curators","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to acidic pH (obsolete GO:0061402)","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter in response to acidity","type":"broad"}],"termid":"GO:0061402"}


id: GO:0009914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hormones into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"hormone transport","termid":"GO:0009914"}


id: GO:0140984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H4 L-lysine (position 12) = S-adenosyl-L-homocysteine + histone H4 N6-methyl-L-lysine (position 12). This reaction is the addition of a methyl group to the lysine residue at position 12 of the histone H4 protein.","definition_xrefs":["PMID:12086618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H4 methyltransferase activity","termid":"GO:0140939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0008276","GO:0140096","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"histone H4K12 methyltransferase activity","synonyms":[{"name":"histone H4 lysine 12-specific methyltransferase activity","type":"exact"},{"name":"histone H4K12 methylase activity","type":"broad"},{"name":"histone H4K12 methylation","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H4-K12 specific)","type":"exact"},{"name":"histone methylase activity (H4-K12 specific)","type":"exact"},{"name":"histone methyltransferase activity (H4-K12 specific)","type":"exact"},{"name":"histone-H4K12 methyltransferase activity","type":"exact"}],"termid":"GO:0140984"}


id: PBO:0051561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 12A","termid":"PBO:0051561"}


id: PBO:0086182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for ubiquinone (Coenzyme Q) biosynthesis; localizes to the matrix face of the mitochondrial inner membrane in a large complex with ubiquinone biosynthetic enzymes; required for gluconeogenic gene activation","termid":"PBO:0086182"}


id: FYPO:0006584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the plasma membrane at the tip of a shmoo, or mating projection, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"},{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane","termid":"FYPO:0004838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to shmoo tip membrane","synonyms":[{"name":"abnormal protein localisation to shmoo tip membrane","type":"exact"},{"name":"abnormal protein localization to mating projection tip membrane","type":"exact"},{"name":"abnormal protein localization to plasma membrane at shmoo tip","type":"exact"},{"name":"abnormal protein localization to shmoo membrane fusion domain","type":"exact"},{"name":"abnormal protein localization to shmoo projection membrane","type":"related"}],"termid":"FYPO:0006584"}


id: GO:0002473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a non-professional antigen presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex. Non-professional antigen presenting cells include all cell types but dendritic cells, B cells, T cells, monocytes, macrophages, and neutrophils.","definition_xrefs":["PMID:15771591","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002473"}


id: PBO:0073925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 13","termid":"PBO:0073925"}


id: GO:0060982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of coronary arteries are generated and organized. Coronary arteries are blood vessels that transport blood to the heart muscle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"},{"relation_name":"is_a","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary artery morphogenesis","termid":"GO:0060982"}


id: FYPO:0003374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular coenzyme Q10 level","synonyms":[{"name":"normal cellular coenzyme Q10 accumulation","type":"related"},{"name":"normal cellular coenzyme Q10 level during mitotic cell cycle","type":"related"},{"name":"normal cellular coenzyme Q10 level during vegetative growth","type":"exact"}],"termid":"FYPO:0003374"}


id: GO:0002779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an antibacterial peptide from a cell or a tissue.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15638771","PMID:11807545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"},{"relation_name":"part_of","term_name":"antibacterial peptide production","termid":"GO:0002778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"antibacterial peptide secretion","termid":"GO:0002779"}


id: PBO:0079231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 7B","termid":"PBO:0079231"}


id: PATO:0000937
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's lacking organisation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organization quality","termid":"PATO:0002264"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorganized","termid":"PATO:0000937"}


id: GO:0009481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O.","definition_xrefs":["EC:1.9.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete aa3-type cytochrome c oxidase (obsolete GO:0009481)","synonyms":[{"name":"aa3-type cytochrome c oxidase","type":"exact"}],"termid":"GO:0009481"}


id: PBO:0079472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWF2 divergent transcript","termid":"PBO:0079472"}


id: GO:1900518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to pullulan.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to pullulan","termid":"GO:0044592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to pullulan","termid":"GO:1900518"}


id: PBO:0047874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(3)(q27)","termid":"PBO:0047874"}


id: PBO:0048023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRY microtubule binding protein","termid":"PBO:0048023"}


id: PBO:0016059
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAT1","termid":"PBO:0016059"}


id: GO:0051942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of amino acid neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter uptake","termid":"GO:0051581"},{"relation_name":"is_a","term_name":"regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051941"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"negatively_regulates","term_name":"amino acid neurotransmitter reuptake","termid":"GO:0051933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of amino acid uptake involved in synaptic transmission","synonyms":[{"name":"down regulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"down-regulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"downregulation of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"inhibition of amino acid uptake during transmission of nerve impulse","type":"related"},{"name":"negative regulation of amino acid neurotransmitter reuptake","type":"exact"},{"name":"negative regulation of amino acid neurotransmitter uptake","type":"exact"},{"name":"negative regulation of amino acid uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051942"}


id: PBO:0057870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3179-3","termid":"PBO:0057870"}


id: PR:O43058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sep1 gene.","definition_xrefs":["UniProtKB:O43058","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead protein sep1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.12","synonyms":[{"name":"Spom972h-sep1","type":"exact"}],"termid":"PR:O43058"}


id: PBO:0083646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongation factor 2 (EF-2), also encoded by EFT2; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin; EFT1 has a paralog, EFT2, that arose from the whole genome duplication","termid":"PBO:0083646"}


id: GO:0006022
data:
  {"annotated_genes":["SJAG_00442","SJAG_04868","SJAG_03723","SJAG_00978","SJAG_04728","SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98887,100748,84326,84839,84667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006031"},{"annotations":[97612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00620":null,"SJAG_00978":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aminoglycan metabolism","type":"exact"}],"termid":"GO:0006022","terms_by_termid":{"GO:0006031":null,"GO:0006032":null}}


id: GO:1905694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidic acid biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:PARL","GOC:TermGenie","PMID:23767959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"regulation of phosphatidic acid biosynthetic process","termid":"GO:1905693"},{"relation_name":"negatively_regulates","term_name":"phosphatidic acid biosynthetic process","termid":"GO:0006654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phosphatidic acid biosynthetic process","synonyms":[{"name":"down regulation of phosphatidic acid anabolism","type":"exact"},{"name":"down regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"down regulation of phosphatidic acid biosynthetic process","type":"exact"},{"name":"down regulation of phosphatidic acid formation","type":"exact"},{"name":"down regulation of phosphatidic acid synthesis","type":"exact"},{"name":"down-regulation of phosphatidic acid anabolism","type":"exact"},{"name":"down-regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"down-regulation of phosphatidic acid biosynthetic process","type":"exact"},{"name":"down-regulation of phosphatidic acid formation","type":"exact"},{"name":"down-regulation of phosphatidic acid synthesis","type":"exact"},{"name":"downregulation of phosphatidic acid anabolism","type":"exact"},{"name":"downregulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"downregulation of phosphatidic acid biosynthetic process","type":"exact"},{"name":"downregulation of phosphatidic acid formation","type":"exact"},{"name":"downregulation of phosphatidic acid synthesis","type":"exact"},{"name":"inhibition of phosphatidic acid anabolism","type":"narrow"},{"name":"inhibition of phosphatidic acid biosynthesis","type":"narrow"},{"name":"inhibition of phosphatidic acid biosynthetic process","type":"narrow"},{"name":"inhibition of phosphatidic acid formation","type":"narrow"},{"name":"inhibition of phosphatidic acid synthesis","type":"narrow"},{"name":"negative regulation of phosphatidic acid anabolism","type":"exact"},{"name":"negative regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"negative regulation of phosphatidic acid formation","type":"exact"},{"name":"negative regulation of phosphatidic acid synthesis","type":"exact"}],"termid":"GO:1905694"}


id: SO:0000773
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mobile genetic elements that contribute to rapid changes in virulence potential. They are present on the genomes of pathogenic strains but absent from the genomes of non pathogenic members of the same or related species.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pathogenic_island","synonyms":[{"name":"pathogenic island","type":"exact"}],"termid":"SO:0000773"}


id: PBO:0056872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICB divergent transcript","termid":"PBO:0056872"}


id: GO:0050599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + O2 + penicillin N = CO2 + deacetoxycephalosporin C + H2O + succinate.","definition_xrefs":["EC:1.14.20.1","RHEA:20748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated","termid":"GO:0050498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"deacetoxycephalosporin-C synthase activity","secondary_identifiers":["KEGG_REACTION:R05301","MetaCyc:1.14.20.1-RXN","GO:0045441"],"synonyms":[{"name":"DAOC synthase activity","type":"related"},{"name":"DAOCS activity","type":"related"},{"name":"deacetoxycephalosporin C synthetase activity","type":"exact"},{"name":"expandase activity","type":"exact"},{"name":"penicillin N expandase activity","type":"related"},{"name":"penicillin-N,2-oxoglutarate:oxygen oxidoreductase (ring-expanding)","type":"related"}],"termid":"GO:0050599"}


id: PBO:0060836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-MDP1 readthrough","termid":"PBO:0060836"}


id: PBO:0017860
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of sucrose to glucose is 3.1 (uM min-1 ml-2)","termid":"PBO:0017860"}


id: PBO:0045763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA hydratase domain containing 3","termid":"PBO:0045763"}


id: PATO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morphology","termid":"PATO:0000051"}


id: PBO:0076175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1D member 1, pseudogene","termid":"PBO:0076175"}


id: GO:0009041
data:
  {"annotated_genes":["SJAG_00779","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114095],"is_not":false,"summary":null,"term":"GO:0009041"},{"annotations":[111665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033862"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + (d)UMP = ADP + (d)UDP.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate kinase activity","termid":"GO:0050145"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"UMP/dUMP kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0009041","terms_by_termid":{"GO:0009041":null,"GO:0033862":null}}


id: FYPO:0002015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to iron ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to iron ion starvation","synonyms":[{"name":"decreased growth during cellular response to iron ion starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to iron ion starvation","type":"exact"},{"name":"hypersensitive to iron ion starvation","type":"exact"},{"name":"sensitive to iron ion depletion","type":"exact"},{"name":"sensitive to iron ion deprivation","type":"exact"},{"name":"sensitive to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to iron ion starvation during vegetative growth","type":"exact"},{"name":"sensitive to iron starvation","type":"exact"}],"termid":"FYPO:0002015"}


id: GO:0030655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a beta-lactam antibiotic, any member of a class of natural or semisynthetic antibiotics whose characteristic feature is a strained, four-membered beta-lactam ring. They include the penicillins and many of the cephalosporins.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic catabolic process","termid":"GO:0017001"},{"relation_name":"is_a","term_name":"beta-lactam antibiotic metabolic process","termid":"GO:0030653"},{"relation_name":"is_a","term_name":"lactam catabolic process","termid":"GO:0072340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"beta-lactam antibiotic catabolic process","synonyms":[{"name":"beta-lactam antibiotic breakdown","type":"exact"},{"name":"beta-lactam antibiotic catabolism","type":"exact"},{"name":"beta-lactam antibiotic degradation","type":"exact"}],"termid":"GO:0030655"}


id: GO:0086090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an SA node cell contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in SA node cell action potential repolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in SAN cell action potential","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinoatrial node cell action potential","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinus node cell action potential","type":"narrow"}],"termid":"GO:0086090"}


id: PBO:0068290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease L","termid":"PBO:0068290"}


id: PBO:0044846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 131A","termid":"PBO:0044846"}


id: GO:0051758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of homologous chromosomes from the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes, during meiosis I anaphase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0051179","GO:0140013"],"is_obsolete":false,"name":"homologous chromosome movement towards spindle pole in meiosis I anaphase","synonyms":[{"name":"homologous chromosome movement towards spindle pole during meiosis I","type":"related"},{"name":"meiosis I, homologous chromosome movement towards spindle pole","type":"exact"}],"termid":"GO:0051758"}


id: PBO:0049310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase pi 1 pseudogene 1","termid":"PBO:0049310"}


id: GO:0052515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the innate immune response of the symbiont organism; the innate immune response is the symbiont's first line of defense against infection. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont innate immunity (obsolete GO:0052515)","synonyms":[{"name":"positive regulation by organism of symbiont innate immunity","type":"exact"},{"name":"positive regulation of symbiont innate immune response","type":"exact"}],"termid":"GO:0052515"}


id: PBO:0059139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 6","termid":"PBO:0059139"}


id: GO:0160137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(2457) in 23S rRNA = pseudouridine(2457) in 23S rRNA.","definition_xrefs":["EC:5.4.99.20","RHEA:38871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853","GO:0140098"],"is_obsolete":false,"name":"23S rRNA pseudouridine(2457) synthase activity","termid":"GO:0160137"}


id: PBO:0071103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 105","termid":"PBO:0071103"}


id: GO:0140439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a stearoyl (systematic name, octadecanoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction: octadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-octadecanoyl-L-cysteinyl-[protein].","definition_xrefs":["RHEA:59740","PMID:12681491","PMID:22247542","PMID:22968831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein-cysteine S-stearoyltransferase activity","termid":"GO:0140439"}


id: GO:0021886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron located in the hypothalamus. These neurons release gonadotrophin-releasing hormone as a neural transmitter.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","PMID:12626695","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothalamus cell differentiation","termid":"GO:0021979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus gonadotrophin-releasing hormone neuron differentiation","synonyms":[{"name":"hypothalamus gonadotropin-releasing hormone neuron differentiation","type":"exact"}],"termid":"GO:0021886"}


id: GO:1990076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cell wall polysaccharide catabolic process that is involved in abscission.","definition_xrefs":["GOC:TermGenie","PMID:23479623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"},{"relation_name":"part_of","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cell wall polysaccharide catabolic process involved in abscission","termid":"GO:1990076"}


id: PBO:0081318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 101 pseudogene 1","termid":"PBO:0081318"}


id: GO:0140364
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein granule located in the cytoplasm and the nucleus. GW-bodies minimally contain the Argonaute2 (Ago2) and TNRC6B proteins, together with specific target RNAs.","definition_xrefs":["PMID:26930655","PMID:29576456","PMID:16418578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"GW body","synonyms":[{"name":"GW-body","type":"exact"}],"termid":"GO:0140364"}


id: GO:0099552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of lipid molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos","PMID:21531987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by lipid","termid":"GO:0099541"},{"relation_name":"is_a","term_name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by lipid, modulating synaptic transmission","termid":"GO:0099552"}


id: PBO:0000289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR21 family","termid":"PBO:0000289"}


id: PBO:0063114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase 1 pseudogene 1","termid":"PBO:0063114"}


id: GO:0019287
data:
  {"annotated_genes":["SJAG_01474","SJAG_04865","SJAG_03715","SJAG_01187","SJAG_02380","SJAG_03349"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84833,90551,92701,110994],"is_not":false,"summary":null,"term":"GO:0019287"},{"annotations":[111564,107465],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate, via the intermediate mevalonate. This pathway converts acetate, in the form of acetyl-CoA, to isopentenyl diphosphate (IPP), the fundamental unit in isoprenoid biosynthesis, through a series of mevalonate intermediates.","definition_xrefs":["MetaCyc:PWY-922","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"isopentenyl diphosphate biosynthetic process","termid":"GO:0009240"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01474":null,"SJAG_02380":null,"SJAG_03349":null,"SJAG_03715":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0006790","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Ac-MVA pathway","type":"exact"},{"name":"acetate-mevalonate pathway","type":"exact"},{"name":"isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process via mevalonate","type":"exact"},{"name":"isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"}],"termid":"GO:0019287","terms_by_termid":{"GO:0019287":null,"GO:2001211":null}}


id: GO:0097211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gonadotropin-releasing hormone stimulus. Gonadotropin-releasing hormone (GnRH) is a peptide hormone responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary. GnRH is synthesized and released by the hypothalamus.","definition_xrefs":["GOC:yaf","PMID:15976007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to gonadotropin-releasing hormone","termid":"GO:0097210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to gonadotropin-releasing hormone","synonyms":[{"name":"cellular response to GnRH","type":"exact"},{"name":"cellular response to gonadotrophin-releasing hormone","type":"exact"}],"termid":"GO:0097211"}


id: GO:0072199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation that contributes to the progression of the ureter gland over time. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"regulates","term_name":"mesenchymal cell proliferation involved in ureter development","termid":"GO:0072198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell proliferation involved in ureter development","synonyms":[{"name":"regulation of ureter mesenchymal cell proliferation","type":"related"},{"name":"regulation of ureteral mesenchymal cell proliferation","type":"related"}],"termid":"GO:0072199"}


id: PBO:0077056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 1 pseudogene 1","termid":"PBO:0077056"}


id: GO:0033570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of transferrin from one side of a membrane to the other.","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete transferrin transmembrane transporter activity (obsolete GO:0033570)","termid":"GO:0033570"}


id: GO:1990192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A decrease in the diameter of collecting lymphatic vessels.","definition_xrefs":["PMID:23322290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphatic vessel size","termid":"GO:1990186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collecting lymphatic vessel constriction","synonyms":[{"name":"lymphatic vessel myogenic constriction","type":"exact"}],"termid":"GO:1990192"}


id: GO:0044351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process that results in the uptake of liquid material by cells from their external environment by the 'ruffling' of the cell membrane to form heterogeneously sized intracellular vesicles called macropinosomes, which can be up to 5 micrometers in size.","definition_xrefs":["PMID:14732047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinocytosis","termid":"GO:0006907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"macropinocytosis","secondary_identifiers":["GO:1902538"],"synonyms":[{"name":"clathrin-independent pinocytosis","type":"broad"},{"name":"single-organism macropinocytosis","type":"related"}],"termid":"GO:0044351"}


id: PBO:0068388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 207","termid":"PBO:0068388"}


id: GO:0071623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of granulocyte chemotaxis. Granulocyte chemotaxis is the movement of a granulocyte in response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte chemotaxis","termid":"GO:0002689"},{"relation_name":"is_a","term_name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"},{"relation_name":"negatively_regulates","term_name":"granulocyte chemotaxis","termid":"GO:0071621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of granulocyte chemotaxis","termid":"GO:0071623"}


id: PBO:0045961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"egl-9 family hypoxia inducible factor 1","termid":"PBO:0045961"}


id: PBO:0080723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT1 antisense RNA","termid":"PBO:0080723"}


id: GO:0048641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle tissue development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"regulates","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"}


id: GO:0003873
data:
  {"annotated_genes":["SJAG_00039","SJAG_02596","SJAG_02713","SJAG_03336"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85099,88956,96043,97475],"is_not":false,"summary":null,"term":"GO:0003873"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose 6-phosphate + ATP = beta-D-fructose 2,6-bisphosphate + ADP + 2 H+.","definition_xrefs":["RHEA:15653","EC:2.7.1.105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_02596":null,"SJAG_02713":null,"SJAG_03336":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"6-phosphofructo-2-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:6-PHOSPHOFRUCTO-2-KINASE-RXN","Reactome:R-HSA-71802","KEGG_REACTION:R02732"],"synonyms":[{"name":"6-phosphofructo-2-kinase (phosphorylating)","type":"related"},{"name":"6-phosphofructose 2-kinase activity","type":"related"},{"name":"ATP:D-fructose-6-phosphate 2-phosphotransferase activity","type":"related"},{"name":"ATP:beta-D-fructose-6-phosphate 2-phosphotransferase activity","type":"related"},{"name":"fructose 6-phosphate 2-kinase activity","type":"related"},{"name":"phosphofructokinase 2 activity","type":"related"}],"termid":"GO:0003873","terms_by_termid":{"GO:0003873":null}}


id: PBO:0056508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-binding lectin family member 3, pseudogene","termid":"PBO:0056508"}


id: FYPO:0002232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have a larger volume than normal and are curved along the long axis. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, swollen curved cells (obsolete FYPO:0002232)","synonyms":[{"name":"inviable microcolony, curved cells with increased cell size","type":"related"},{"name":"inviable microcolony, curved cells with increased cell volume","type":"exact"},{"name":"inviable microcolony, enlarged curved cells","type":"related"},{"name":"inviable microcolony, large curved cells","type":"related"},{"name":"inviable microcolony, swollen curved vegetative cells","type":"exact"}],"termid":"FYPO:0002232"}


id: PBO:0066555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 18","termid":"PBO:0066555"}


id: FYPO:0008230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the MPS1 barrier located in the mating-type region is normal (i.e. indistinguishable from wild-type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal replication fork arrest","termid":"FYPO:0008191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal replication fork arrest at MPS1 barrier","termid":"FYPO:0008230"}


id: PBO:0069428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 693, pseudogene","termid":"PBO:0069428"}


id: GO:0045232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an S-layer enveloping the cell. The S-layer is a crystalline protein layer surrounding some bacteria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"S-layer organization","synonyms":[{"name":"S-layer organisation","type":"exact"},{"name":"S-layer organization and biogenesis","type":"related"}],"termid":"GO:0045232"}


id: PBO:0060855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK2 pseudogene 3","termid":"PBO:0060855"}


id: GO:1905860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heparan sulfate proteoglycan binding.","definition_xrefs":["GOC:TermGenie","PMID:7683668","GO_REF:0000059","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein binding","termid":"GO:0032092"},{"relation_name":"is_a","term_name":"regulation of heparan sulfate proteoglycan binding","termid":"GO:1905858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heparan sulfate proteoglycan binding","synonyms":[{"name":"activation of heparan sulfate proteoglycan binding","type":"narrow"},{"name":"activation of heparin proteoglycan binding","type":"related"},{"name":"positive regulation of heparin proteoglycan binding","type":"related"},{"name":"up regulation of heparan sulfate proteoglycan binding","type":"exact"},{"name":"up regulation of heparin proteoglycan binding","type":"related"},{"name":"up-regulation of heparan sulfate proteoglycan binding","type":"exact"},{"name":"up-regulation of heparin proteoglycan binding","type":"related"},{"name":"upregulation of heparan sulfate proteoglycan binding","type":"exact"},{"name":"upregulation of heparin proteoglycan binding","type":"related"}],"termid":"GO:1905860"}


id: GO:0006572
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102868],"is_not":false,"summary":null,"term":"GO:0006572"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine metabolic process","termid":"GO:0006570"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process","termid":"GO:1902222"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tyrosine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tyrosine breakdown","type":"exact"},{"name":"tyrosine catabolism","type":"exact"},{"name":"tyrosine degradation","type":"exact"}],"termid":"GO:0006572","terms_by_termid":{"GO:0006572":null}}


id: PBO:0067828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 130","termid":"PBO:0067828"}


id: GO:0046455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of organosilicons, any organic compound that contains silicon.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organosilicon metabolic process","termid":"GO:0018945"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"organosilicon catabolic process","synonyms":[{"name":"organosilicon breakdown","type":"exact"},{"name":"organosilicon catabolism","type":"exact"},{"name":"organosilicon degradation","type":"exact"},{"name":"organosilicone catabolic process","type":"exact"},{"name":"organosilicone catabolism","type":"exact"}],"termid":"GO:0046455"}


id: PATO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000418 relative number value (obsolete PATO:0000418)","termid":"PATO:0000418"}


id: PBO:0060291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6B antisense RNA 1","termid":"PBO:0060291"}


id: FYPO:0003886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which endocytosis is abnormal. Endocytosis is a vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["GO:0006897","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal endocytosis","synonyms":[{"name":"abnormal actin-mediated endocytosis","type":"exact"},{"name":"abnormal protein internalization","type":"narrow"},{"name":"endocytosis defects","type":"exact"},{"name":"endocytosis: abnormal","type":"related"}],"termid":"FYPO:0003886"}


id: PBO:0057856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3167","termid":"PBO:0057856"}


id: GO:0072554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a developing blood vessel forms an endothelial lumen through which blood will flow.","definition_xrefs":["GOC:dsf","PMID:20926893","PMID:16799567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel lumenization","termid":"GO:0072554"}


id: PBO:0056524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 1 receptor","termid":"PBO:0056524"}


id: PBO:0006206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-chemical,_gene_product,_or_complex","termid":"PBO:0006206"}


id: GO:0033313
data:
  {"annotated_genes":["SJAG_01082","SJAG_04259","SJAG_01680","SJAG_01837","SJAG_04287","SJAG_02771","SJAG_03438","SJAG_04126","SJAG_03327","SJAG_00364","SJAG_03529","SJAG_01330","SJAG_03026"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102399,110589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[88621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[102703,112154,87532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[112155,102704,110353,76901,85184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[97897,102400,112766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[109888],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97435],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signaling process that contributes to a meiotic cell cycle checkpoint that ensures accurate chromosome replication and segregation by preventing progression through a meiotic cell cycle until conditions are suitable for the cell to proceed to the next stage.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01680":null,"SJAG_01837":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_03529":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"meiotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072411"],"synonyms":[{"name":"meiotic cell cycle checkpoint","type":"exact"},{"name":"signal transduction involved in meiotic cell cycle checkpoint","type":"exact"}],"termid":"GO:0033313","terms_by_termid":{"GO:0033315":null,"GO:0033316":null,"GO:0044778":null,"GO:0051598":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0088422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv25","termid":"PBO:0088422"}


id: GO:0030112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A carbohydrate rich layer at the outermost periphery of a cell.","definition_xrefs":["PMID:28876829","GOC:mlg","GOC:krc","ISBN:0815316208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"glycocalyx","secondary_identifiers":["Wikipedia:Glycocalyx"],"termid":"GO:0030112"}


id: PBO:0110354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 pseudogene 1","termid":"PBO:0110354"}


id: PBO:0031367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_recombination","termid":"PBO:0031367"}


id: MOD:00579
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propionaldehyde +40","synonyms":[{"name":"Delta:H(4)C(3)","type":"related"},{"name":"Propionaldehyde +40","type":"related"}],"termid":"MOD:00579"}


id: PBO:0061331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B9","termid":"PBO:0061331"}


id: GO:0075168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its protein kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein kinase-mediated signal transduction in response to host (obsolete GO:0075168)","synonyms":[{"name":"regulation of symbiont protein kinase-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075168"}


id: PATO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000010 relative speed (obsolete PATO:0000010)","termid":"PATO:0000010"}


id: GO:1900715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of violaceol I biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of violaceol I biosynthetic process","termid":"GO:1900713"},{"relation_name":"positively_regulates","term_name":"violaceol I biosynthetic process","termid":"GO:1900590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of violaceol I biosynthetic process","synonyms":[{"name":"activation of violaceol I anabolism","type":"exact"},{"name":"activation of violaceol I biosynthesis","type":"exact"},{"name":"activation of violaceol I biosynthetic process","type":"narrow"},{"name":"activation of violaceol I formation","type":"exact"},{"name":"activation of violaceol I synthesis","type":"exact"},{"name":"positive regulation of violaceol I anabolism","type":"exact"},{"name":"positive regulation of violaceol I biosynthesis","type":"exact"},{"name":"positive regulation of violaceol I formation","type":"exact"},{"name":"positive regulation of violaceol I synthesis","type":"exact"},{"name":"up regulation of violaceol I anabolism","type":"exact"},{"name":"up regulation of violaceol I biosynthesis","type":"exact"},{"name":"up regulation of violaceol I biosynthetic process","type":"exact"},{"name":"up regulation of violaceol I formation","type":"exact"},{"name":"up regulation of violaceol I synthesis","type":"exact"},{"name":"up-regulation of violaceol I anabolism","type":"exact"},{"name":"up-regulation of violaceol I biosynthesis","type":"exact"},{"name":"up-regulation of violaceol I biosynthetic process","type":"exact"},{"name":"up-regulation of violaceol I formation","type":"exact"},{"name":"up-regulation of violaceol I synthesis","type":"exact"},{"name":"upregulation of violaceol I anabolism","type":"exact"},{"name":"upregulation of violaceol I biosynthesis","type":"exact"},{"name":"upregulation of violaceol I biosynthetic process","type":"exact"},{"name":"upregulation of violaceol I formation","type":"exact"},{"name":"upregulation of violaceol I synthesis","type":"exact"}],"termid":"GO:1900715"}


id: GO:0035134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the dorsal fin are generated and organized. A dorsal fin is an unpaired medial fin on the dorsal aspect of a fish that provides lateral stability while swimming. Generally fish have one or two dorsal fins.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic medial fin morphogenesis","termid":"GO:0035132"},{"relation_name":"is_a","term_name":"dorsal fin morphogenesis","termid":"GO:0035142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic dorsal fin morphogenesis","termid":"GO:0035134"}


id: PBO:0043631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPB2 divergent transcript","termid":"PBO:0043631"}


id: PBO:0111887
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huamn GCFC2 ortholog","termid":"PBO:0111887"}


id: PBO:0016574
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Coiled coil Protein","termid":"PBO:0016574"}


id: GO:0102427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: allocryptopine + NADPH + O2 + H+ = 6-hydroxy-allocryptopine + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"allocryptopine 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-13828"],"termid":"GO:0102427"}


id: GO:0008177
data:
  {"annotated_genes":["SJAG_00260","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84951,85310],"is_not":false,"summary":null,"term":"GO:0008177"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a quinone + succinate = a quinol + fumarate.","definition_xrefs":["RHEA:40523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate dehydrogenase activity","termid":"GO:0000104"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","termid":"GO:0016635"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"succinate dehydrogenase (quinone) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.3.5.1","MetaCyc:RXN-14971","Reactome:R-HSA-70994","GO:0019737","KEGG_REACTION:R02164","Reactome:R-HSA-163213"],"synonyms":[{"name":"fumarate reductase (menaquinone)","type":"narrow"},{"name":"succinate dehydrogenase (menaquinone)","type":"narrow"},{"name":"succinate dehydrogenase (ubiquinone) activity","type":"narrow"},{"name":"succinic dehydrogenase activity","type":"broad"}],"termid":"GO:0008177","terms_by_termid":{"GO:0008177":null}}


id: PBO:0071328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 5","termid":"PBO:0071328"}


id: GO:0021825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where neuronal precursors migrate tangentially in the cerebral cortex, primarily guided through physical cell-cell interactions.","definition_xrefs":["GOC:jid","GOC:dph","GOC:cls","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cell migration","termid":"GO:0006929"},{"relation_name":"is_a","term_name":"cerebral cortex tangential migration","termid":"GO:0021800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cerebral cortex tangential migration","termid":"GO:0021825"}


id: GO:0002418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune system process that functions in the response of an organism to a tumor cell.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:16730260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response to tumor cell","termid":"GO:0002418"}


id: PBO:0066033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 2","termid":"PBO:0066033"}


id: PBO:0039663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit beta 1","termid":"PBO:0039663"}


id: PR:Q9UQW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acetyl-CoA acetyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR18919:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.09c","secondary_identifiers":["UniProtKB:Q9UQW6"],"synonyms":[{"name":"SPBC215.09c","type":"related"},{"name":"Spom972h-ACAT1","type":"exact"},{"name":"acetoacetyl-CoA thiolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ergosterol biosynthesis protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UQW6"}


id: PBO:0080494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VWC2L intronic transcript 1","termid":"PBO:0080494"}


id: RO:HOM0000028
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Biological homology that is characterized by changes, over evolutionary time, in the rate or timing of developmental events of homologous structures.","definition_xrefs":["ISBN:978-0674639416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_biological_homology_relationship_with","termid":"RO:HOM0000008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_heterochronous_homology_relationship_with","synonyms":[{"name":"heterochronous homologous to","type":"exact"},{"name":"heterochrony","type":"exact"}],"termid":"RO:HOM0000028"}


id: GO:0031044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 8 O-glycan structure, Gal-alpha-(1->3)-GalNAc.","definition_xrefs":["GOC:mah","GOC:pr","PMID:10580130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycan processing","termid":"GO:0016266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"O-glycan processing, core 8","termid":"GO:0031044"}


id: PBO:0062283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 7 pseudogene","termid":"PBO:0062283"}


id: FYPO:0004719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested when cells have condensed chromosomes and a single, normally located septum, under conditions where arrest does not normally occur.","definition_xrefs":["PMID:8387358","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with condensed chromosomes","termid":"FYPO:0003738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell","synonyms":[{"name":"abnormal cell cycle arrest with condensed chromosomes, septated cell during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated vegetative cell","type":"exact"}],"termid":"FYPO:0004719"}


id: PBO:0065596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 12","termid":"PBO:0065596"}


id: GO:0000309
data:
  {"annotated_genes":["SJAG_01500","SJAG_02889"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95445,96166],"is_not":false,"summary":null,"term":"GO:0000309"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + nicotinamide nucleotide = diphosphate + NAD+.","definition_xrefs":["EC:2.7.7.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01500":null,"SJAG_02889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nicotinamide-nucleotide adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:21360","MetaCyc:2.7.7.1-RXN","Reactome:R-HSA-8939959"],"synonyms":[{"name":"ATP:NMN adenylyltransferase activity","type":"related"},{"name":"ATP:nicotinamide-nucleotide adenylyltransferase activity","type":"exact"},{"name":"NAD(+) diphosphorylase activity","type":"narrow"},{"name":"NAD(+) pyrophosphorylase activity","type":"narrow"},{"name":"NAD+ diphosphorylase activity","type":"related"},{"name":"NAD+ pyrophosphorylase activity","type":"related"},{"name":"NMN adenylyltransferase activity","type":"narrow"},{"name":"NMNAT activity","type":"narrow"},{"name":"adenosine triphosphate-nicotinamide mononucleotide transadenylase activity","type":"related"},{"name":"diphosphopyridine nucleotide pyrophosphorylase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide pyrophosphorylase activity","type":"narrow"},{"name":"nicotinamide mononucleotide adenylyltransferase activity","type":"narrow"}],"termid":"GO:0000309","terms_by_termid":{"GO:0000309":null}}


id: PBO:0029597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pyruvylated_galactose_absent_from_cell","termid":"PBO:0029597"}


id: PBO:0004941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Boi family protein","termid":"PBO:0004941"}


id: GO:0032615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-12 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-12 production","secondary_identifiers":["GO:0042090","GO:0072610"],"synonyms":[{"name":"CLMF production","type":"narrow"},{"name":"IL-12 production","type":"exact"},{"name":"NKSF production","type":"narrow"},{"name":"interleukin-12 biosynthetic process","type":"narrow"},{"name":"interleukin-12 secretion","type":"narrow"}],"termid":"GO:0032615"}


id: PR:O94278
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thi5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine repressible genes regulatory protein thi5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.30c","synonyms":[{"name":"Spom972h-thi5","type":"exact"},{"name":"transcription factor ntf1 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94278"}


id: PBO:0044686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDN and PRKAG1 antisense RNA 1","termid":"PBO:0044686"}


id: PBO:0048383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor family member 6","termid":"PBO:0048383"}


id: PBO:0016068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit (predicted)","termid":"PBO:0016068"}


id: PBO:0090049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease","termid":"PBO:0090049"}


id: _global:affected_by
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a gene product that influences the modification, where the experiment does not distinguish between direct action (e.g. adds or removes a modification) and indirect effects.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"affected_by","termid":"_global:affected_by"}


id: PBO:0085160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide excision repair (NER) protein; binds damaged DNA during NER; binds DNA in an ATP-dependent manner (with Rad16p) during NER; required for repair of non-transcribed chromatin; subunit of Nucleotide Excision Repair Factor 4 (NEF4) and the Elongin-Cullin-Socs (ECS) ligase complex","termid":"PBO:0085160"}


id: GO:0051320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following G1, during which DNA synthesis takes place.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"interphase","termid":"GO:0051325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"S phase","secondary_identifiers":["Wikipedia:S_phase"],"synonyms":[{"name":"S-phase","type":"exact"}],"termid":"GO:0051320"}


id: PBO:0079676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 W pseudogene 1","termid":"PBO:0079676"}


id: PBO:0091013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic/meiotic cohesin complex ATPase subunit Psm3/Smc3","termid":"PBO:0091013"}


id: GO:0051377
data:
  {"annotated_genes":["SJAG_02488","SJAG_02523","SJAG_03506","SJAG_04165"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103647,108456,110881],"is_not":false,"summary":null,"term":"GO:0051377"},{"annotations":[84788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051267"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ethanolamine phosphate to a mannose residue in the GPI lipid precursor.","definition_xrefs":["PMID:15632136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02488":null,"SJAG_02523":null,"SJAG_03506":null,"SJAG_04165":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016780","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"mannose-ethanolamine phosphotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162798"],"synonyms":[{"name":"EtN-P transferase activity","type":"exact"},{"name":"addition of ethanolamine phosphate to mannose of GPI precursor","type":"exact"},{"name":"ethanolamine phosphate transferase activity","type":"broad"},{"name":"phosphoethanolamine transferase activity","type":"broad"}],"termid":"GO:0051377","terms_by_termid":{"GO:0051267":null,"GO:0051377":null}}


id: PBO:0046439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPM2A interacting protein 1","termid":"PBO:0046439"}


id: GO:1905634
data:
  {"annotated_genes":["SJAG_00823","SJAG_01716","SJAG_01825","SJAG_05978","SJAG_03591","SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99429],"is_not":false,"summary":null,"term":"GO:1905634"},{"annotations":[102342,102437,87839,111423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"},{"annotations":[103503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905406"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to chromatin.","definition_xrefs":["PMID:20889714","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00823":null,"SJAG_01716":null,"SJAG_01825":null,"SJAG_02074":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to chromatin","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to chromatin","type":"exact"}],"termid":"GO:1905634","terms_by_termid":{"GO:1905406":null,"GO:1905412":null,"GO:1905634":null}}


id: PBO:0053288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIMD1 antisense RNA 1","termid":"PBO:0053288"}


id: GO:0033841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [1-beta-D-fructofuranosyl-(2->1)-]m+1 alpha-D-glucopyranoside + [1-beta-D-fructofuranosyl-(2->1)-]n+1 alpha-D-glucopyranoside = [1-beta-D-fructofuranosyl-(2->1)-]m alpha-D-glucopyranoside + [1-beta-D-fructofuranosyl-(2->1)-]n+1 beta-D-fructofuranosyl-(2->6)-alpha-D-glucopyranoside (m > 0; n >= 0).","definition_xrefs":["EC:2.4.1.243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosyltransferase activity","termid":"GO:0050738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"6G-fructosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.243-RXN"],"synonyms":[{"name":"1F-oligo[beta-D-fructofuranosyl-(2->1)-]sucrose 6G-beta-D-fructotransferase activity","type":"related"},{"name":"6G-FFT","type":"related"},{"name":"6G-FT","type":"related"},{"name":"6G-fructotransferase activity","type":"related"},{"name":"fructan:fructan 6G-fructosyltransferase activity","type":"related"}],"termid":"GO:0033841"}


id: GO:2001142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a nicotinateacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"nicotinate transport","termid":"GO:2001142"}


id: PBO:0081860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 792","termid":"PBO:0081860"}


id: GO:0050267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: poly-cis-polyprenyl diphosphate + isopentenyl diphosphate = diphosphate + a poly-cis-polyprenyl diphosphate longer by one C5 unit.","definition_xrefs":["EC:2.5.1.20","MetaCyc:RUBBER-CIS-POLYPRENYLCISTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyltransferase activity","termid":"GO:0002094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"rubber cis-polyprenylcistransferase activity","secondary_identifiers":["RHEA:18801","MetaCyc:2.5.1.20-RXN"],"synonyms":[{"name":"cis-prenyl transferase activity","type":"related"},{"name":"isopentenyl pyrophosphate cis-1,4-polyisoprenyl transferase activity","type":"related"},{"name":"poly-cis-polyprenyl-diphosphate:isopentenyl-diphosphate polyprenylcistransferase activity","type":"related"},{"name":"rubber allyltransferase activity","type":"related"},{"name":"rubber polymerase activity","type":"related"},{"name":"rubber prenyltransferase activity","type":"related"},{"name":"rubber transferase activity","type":"broad"}],"termid":"GO:0050267"}


id: PBO:0046411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ependymin related 1","termid":"PBO:0046411"}


id: GO:0071384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosteroid hormone stimulus. A corticosteroid is a steroid hormone that is produced in the adrenal cortex. Corticosteroids are involved in a wide range of physiologic systems such as stress response, immune response and regulation of inflammation, carbohydrate metabolism, protein catabolism, blood electrolyte levels, and behavior. They include glucocorticoids and mineralocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to corticosteroid","termid":"GO:0031960"},{"relation_name":"is_a","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to corticosteroid stimulus","termid":"GO:0071384"}


id: PBO:0051037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family receptor 1","termid":"PBO:0051037"}


id: PBO:0045859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 49","termid":"PBO:0045859"}


id: GO:0099111
data:
  {"annotated_genes":["SJAG_02509","SJAG_00140","SJAG_01613","SJAG_04143","SJAG_04001","SJAG_04597","SJAG_05266","SJAG_03673","SJAG_00368","SJAG_05319","SJAG_05220","SJAG_01546","SJAG_00397","SJAG_03073","SJAG_00918","SJAG_02561","SJAG_00332","SJAG_00113","SJAG_04003","SJAG_01370","SJAG_02431","SJAG_05185","SJAG_01863","SJAG_02045","SJAG_02761","SJAG_01211","SJAG_02286","SJAG_02737","SJAG_01662","SJAG_04387","SJAG_02336","SJAG_03835","SJAG_03540","SJAG_01775","SJAG_00851","SJAG_03437","SJAG_01297","SJAG_01224","SJAG_02731","SJAG_01371"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113032,87101,96829,107145,97529,83894,110050,87939,91312,87489,99362,93686,107495,107315,99066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[97530,107317,102679],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[97541,100116,103524,108230,105712,110052,113036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[93762,95334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[93688,87491,83898,91314,95335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[90520],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[99853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[104363,100008,114732,96490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[94731,104981,85871,110193,92884,113007,85265,96620,87089,103601,105989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[87252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010970"}]},"cv_name":"biological_process","definition":"A microtubule-based process that results in the transport of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.","definition_xrefs":["ISBN:0815316194","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"microtubule-based transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099111","terms_by_termid":{"GO:0000743":null,"GO:0010970":null,"GO:0030989":null,"GO:0032118":null,"GO:0090561":null,"GO:0098863":null,"GO:0099117":null,"GO:0140210":null,"GO:1902854":null,"GO:1990976":null}}


id: PBO:0041938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 6","termid":"PBO:0041938"}


id: GO:0002875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chronic inflammatory response","termid":"GO:0002677"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response to antigenic stimulus","termid":"GO:0002862"},{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response to antigenic stimulus","termid":"GO:0002874"},{"relation_name":"negatively_regulates","term_name":"chronic inflammatory response to antigenic stimulus","termid":"GO:0002439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chronic inflammatory response to antigenic stimulus","synonyms":[{"name":"down regulation of chronic inflammatory response to antigenic stimulus","type":"exact"},{"name":"down-regulation of chronic inflammatory response to antigenic stimulus","type":"exact"},{"name":"downregulation of chronic inflammatory response to antigenic stimulus","type":"exact"},{"name":"inhibition of chronic inflammatory response to antigenic stimulus","type":"narrow"}],"termid":"GO:0002875"}


id: GO:0047854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-diguanidinobutane + H2O = agmatine + urea.","definition_xrefs":["EC:3.5.3.20","RHEA:13597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diguanidinobutanase activity","secondary_identifiers":["MetaCyc:DIGUANIDINOBUTANASE-RXN","KEGG_REACTION:R01418"],"synonyms":[{"name":"1,4-diguanidinobutane amidinohydrolase activity","type":"related"}],"termid":"GO:0047854"}


id: PBO:0071242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 83","termid":"PBO:0071242"}


id: PBO:0090180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE binding protein Sly1","termid":"PBO:0090180"}


id: PATO:0000192
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000192 locomotor_activity (obsolete PATO:0000192)","termid":"PATO:0000192"}


id: GO:0070883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a precursor microRNA (pre-miRNA) transcript, a stem-loop-containing precursor of microRNA.","definition_xrefs":["PMID:18951094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"pre-miRNA binding","synonyms":[{"name":"pre-microRNA binding","type":"exact"},{"name":"precursor microRNA binding","type":"exact"}],"termid":"GO:0070883"}


id: MOD:01783
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N,N-dimethyl-L-serine.","definition_xrefs":["RESID:AA0534","PubMed:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino dimethylated residue","termid":"MOD:01686"},{"relation_name":"is_a","term_name":"N-methylated serine","termid":"MOD:01800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-serine","synonyms":[{"name":"(2S)-2-(dimethylamino)propanoic acid","type":"exact"},{"name":"MOD_RES N,N-dimethylserine","type":"exact"},{"name":"N,N-dimethyl-L-serine","type":"exact"},{"name":"N,N-dimethylserine","type":"exact"}],"termid":"MOD:01783"}


id: PBO:0040870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMI1 proto-oncogene, polycomb ring finger","termid":"PBO:0040870"}


id: PBO:0071281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 4","termid":"PBO:0071281"}


id: PBO:0056676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2A pseudogene 1","termid":"PBO:0056676"}


id: GO:0033236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD+ = an 11-oxosteroid + NADH + H+.","definition_xrefs":["PMID:15761036"],"gene_count":0,"genotype_count":0,"name":"obsolete 11-beta-hydroxysteroid dehydrogenase (NAD+) activity (obsolete GO:0033236)","synonyms":[{"name":"11-beta-hydroxysteroid dehydrogenase (NAD+) activity","type":"exact"}],"termid":"GO:0033236"}


id: GO:2001100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a pentasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pentasaccharide transport","termid":"GO:2001100"}


id: PBO:0017982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topoisomerase II-associated deadenylation-dependent mRNA-decapping factor Pdc2 (predicted)","termid":"PBO:0017982"}


id: PBO:0088326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, MADS-box Map1","termid":"PBO:0088326"}


id: GO:2000075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of site selection that occurs as part of cytokinesis.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"regulation of cytokinesis, site selection","termid":"GO:2000073"},{"relation_name":"negatively_regulates","term_name":"cytokinesis, division site positioning","termid":"GO:0007105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of cytokinesis, site selection","synonyms":[{"name":"negative regulation of site selection involved in cell cycle cytokinesis","type":"exact"}],"termid":"GO:2000075"}


id: PR:Q09780
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mevalonate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10457:SF4","PRO:DNx","OMA:SCHPO00072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.11c","secondary_identifiers":["UniProtKB:Q09780"],"synonyms":[{"name":"MK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MVK","type":"exact"}],"termid":"PR:Q09780"}


id: PBO:0070735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 5","termid":"PBO:0070735"}


id: PBO:0005578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPAse interacting protein involved in vesicle tethering at the Golgi","termid":"PBO:0005578"}


id: GO:0044527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a peptidyl-cystine residue in a protein by the direct addition of H2S, followed by the removal of 2 protons to form peptidyl-cysteine persulfide.","definition_xrefs":["GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cystine sulfhydration","termid":"GO:0044525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of peptidyl-cystine persulfide by sulphur transfer from H2S","termid":"GO:0044527"}


id: GO:0034213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of quinolinate, the anion of quinolinic acid, also known as 2,3-pyridinedicarboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"},{"relation_name":"is_a","term_name":"quinolinate metabolic process","termid":"GO:0046874"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"quinolinate catabolic process","synonyms":[{"name":"quinolinate breakdown","type":"exact"},{"name":"quinolinate catabolism","type":"exact"},{"name":"quinolinate degradation","type":"exact"}],"termid":"GO:0034213"}


id: PBO:0054839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2253","termid":"PBO:0054839"}


id: GO:0047584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-4-oxobutane-1,2,4-tricarboxylate = (1E)-4-oxobut-1-ene-1,2,4-tricarboxylate + H2O.","definition_xrefs":["EC:4.2.1.83","RHEA:17401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"4-oxalmesaconate hydratase activity","secondary_identifiers":["KEGG_REACTION:R04478","MetaCyc:RXN-2463"],"synonyms":[{"name":"2-hydroxy-4-oxobutane-1,2,4-tricarboxylate 2,3-hydro-lyase [(E)-4-oxobut-1-ene-1,2,4-tricarboxylate-forming]","type":"related"},{"name":"2-hydroxy-4-oxobutane-1,2,4-tricarboxylate 2,3-hydro-lyase activity","type":"related"},{"name":"4-carboxy-2-oxobutane-1,2,4-tricarboxylate 2,3-hydro-lyase activity","type":"related"},{"name":"4-carboxy-2-oxohexenedioate hydratase activity","type":"related"},{"name":"gamma-oxalmesaconate hydratase activity","type":"related"},{"name":"oxalmesaconate hydratase activity","type":"related"}],"termid":"GO:0047584"}


id: PBO:0066005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ral guanine nucleotide dissociation stimulator","termid":"PBO:0066005"}


id: PBO:0000753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein Rad4","termid":"PBO:0000753"}


id: PBO:0060730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 1","termid":"PBO:0060730"}


id: PBO:0026673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_salt_stress","termid":"PBO:0026673"}


id: PBO:0001891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis14","termid":"PBO:0001891"}


id: GO:0032595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a B cell receptor within a lipid bilayer.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport within lipid bilayer","termid":"GO:0032594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"B cell receptor transport within lipid bilayer","synonyms":[{"name":"B cell receptor translocation within membrane","type":"exact"},{"name":"BCR translocation within membrane","type":"exact"},{"name":"BCR transport within lipid bilayer","type":"exact"}],"termid":"GO:0032595"}


id: PBO:0074474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMU1 DNA replication regulator and spliceosomal factor","termid":"PBO:0074474"}


id: PBO:0089348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial sorting and assembly machinery complex subunit Sam50","termid":"PBO:0089348"}


id: GO:0043467
data:
  {"annotated_genes":["SJAG_01376","SJAG_02433","SJAG_00698","SJAG_05006","SJAG_00963","SJAG_01062","SJAG_05314","SJAG_00685","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77736,87041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[75002,72017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[92685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"},{"annotations":[85816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[105790,93734,90481,107978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903715"},{"annotations":[75005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and the processes involved in the liberation of energy from these substances.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_00698":null,"SJAG_00963":null,"SJAG_01062":null,"SJAG_01376":null,"SJAG_02433":null,"SJAG_02592":null,"SJAG_05006":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of generation of precursor metabolites and energy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043467","terms_by_termid":{"GO:0043456":null,"GO:0045719":null,"GO:0045820":null,"GO:1903715":null,"GO:1905857":null,"GO:2001172":null}}


id: PBO:0029390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_nucleoplasm_during_cellular_response_to_hydroxyurea","termid":"PBO:0029390"}


id: FYPO:0007413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the telomere is abnormal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology","termid":"FYPO:0006508"},{"relation_name":"output_of","term_name":"abnormal telomere maintenance during G0","termid":"FYPO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0000641"],"is_obsolete":false,"name":"abnormal telomere morphology during G0","synonyms":[{"name":"abnormal chromosome morphology at telomere during G0","type":"exact"},{"name":"abnormal chromosome morphology at telomeric region during G0","type":"exact"},{"name":"abnormal telomere morphology during cell quiescence","type":"exact"},{"name":"abnormal telomere morphology during quiescence","type":"exact"},{"name":"abnormal telomeric region morphology during G0","type":"exact"}],"termid":"FYPO:0007413"}


id: PBO:0062880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTX2 pseudogene 1","termid":"PBO:0062880"}


id: PBO:0086867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase; regulates spermine uptake; involved in polyamine transport; possible mitochondrial protein; PTK1 has a paralog, PTK2, that arose from the whole genome duplication","termid":"PBO:0086867"}


id: MOD:00530
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to L-selenomethionine.","definition_xrefs":["OMSSA:113","PubMed:12148805","Unimod:162#M"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium substitution for sulfur","termid":"MOD:00007"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-selenomethionine","synonyms":[{"name":"Delta:S(-1)Se(1)","type":"related"},{"name":"Se(S)Met","type":"exact"},{"name":"Selenium replaces sulphur","type":"related"},{"name":"semetm","type":"exact"}],"termid":"MOD:00530"}


id: GO:0043973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 4 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 acetylation (obsolete GO:0043973)","synonyms":[{"name":"histone H3 acetylation at K4","type":"exact"},{"name":"histone H3K4 acetylation","type":"exact"}],"termid":"GO:0043973"}


id: MOD:01589
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(2,4-diacetamido-2,4-dideoxyglucosyl)-L-serine.","definition_xrefs":["PubMed:16949362","RESID:AA0499","PubMed:15249686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-(2,4-diacetamido-2,4-dideoxyglucosyl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[(2,4-diacetamido-2,4-dideoxy-beta-D-glucopyranosyl)oxy]propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (DADDGlc) serine","type":"exact"},{"name":"DADDGlc","type":"exact"},{"name":"O-(2,4-diacetamido-2,4-dideoxy-D-glucosyl)-L-serine","type":"exact"},{"name":"O-(2,4-diacetamido-2,4-dideoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O-[2,4-bis(acetylamino)]glucosyl-L-serine","type":"exact"},{"name":"O-seryl-beta-2,4-bis(acetylamino)glucoside","type":"exact"},{"name":"O3-(2,4-diacetamido-2,4-dideoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"}],"termid":"MOD:01589"}


id: GO:0008356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The asymmetric division of cells to produce two daughter cells with different developmental potentials. It is of fundamental significance for the generation of cell diversity.","definition_xrefs":["PMID:11672519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asymmetric cell division","secondary_identifiers":["Wikipedia:Asymmetric_cell_division"],"synonyms":[{"name":"asymmetric cytokinesis","type":"related"},{"name":"asymmetrical cell division","type":"exact"},{"name":"asymmetrical cytokinesis","type":"related"}],"termid":"GO:0008356"}


id: PBO:0004422
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates eng1 target genes","termid":"PBO:0004422"}


id: GO:0071226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of fungal origin such as chito-octamer oligosaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of fungal origin","termid":"GO:0002238"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to molecule of fungal origin","synonyms":[{"name":"cellular response to fungus associated molecule","type":"exact"}],"termid":"GO:0071226"}


id: PBO:0051658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interphotoreceptor matrix proteoglycan 1","termid":"PBO:0051658"}


id: GO:2000166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in pericardium morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of planar cell polarity pathway involved in heart morphogenesis","termid":"GO:2000160"},{"relation_name":"negatively_regulates","term_name":"planar cell polarity pathway involved in pericardium morphogenesis","termid":"GO:0061354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of planar cell polarity pathway involved in pericardium morphogenesis","termid":"GO:2000166"}


id: PBO:0027074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_vegetative_cell_with_binucleate_and_anucleate_compartments","termid":"PBO:0027074"}


id: GO:0003918
data:
  {"annotated_genes":["SJAG_05295","SJAG_03567"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86410,102282],"is_not":false,"summary":null,"term":"GO:0003918"}]},"cv_name":"molecular_function","definition":"Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined, driven by ATP hydrolysis. The enzyme changes the linking number in multiples of 2.","definition_xrefs":["PMID:8811192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase activity","termid":"GO:0003916"},{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03567":null,"SJAG_05295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:5.99.1.3-RXN","Wikipedia:Type_II_topoisomerase","EC:5.6.2.2","GO:0061505"],"synonyms":[{"name":"DNA topoisomerase (ATP-hydrolysing)","type":"related"},{"name":"DNA topoisomerase II","type":"narrow"},{"name":"DNA topoisomerase II activity","type":"narrow"},{"name":"DNA topoisomerase IV activity","type":"narrow"},{"name":"DNA topoisomerase type II activity","type":"exact"},{"name":"deoxyribonucleate topoisomerase","type":"broad"},{"name":"deoxyribonucleic topoisomerase activity","type":"broad"},{"name":"topoisomerase","type":"broad"},{"name":"topoisomerase II","type":"narrow"},{"name":"type II DNA topoisomerase activity","type":"related"}],"termid":"GO:0003918","terms_by_termid":{"GO:0003918":null}}


id: GO:0102428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: kaempferol 3-O-glucoside + UDP-alpha-D-glucose = kaempferol-3-gentiobioside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kaempferol-3-O-glucoside 1,6-glucosyltransferase activity (obsolete GO:0102428)","termid":"GO:0102428"}


id: GO:1901868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ecgonine methyl ester.","definition_xrefs":["PMID:22665766","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"ecgonine methyl ester metabolic process","termid":"GO:1901867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ecgonine methyl ester catabolic process","synonyms":[{"name":"ecgonine methyl ester breakdown","type":"exact"},{"name":"ecgonine methyl ester catabolism","type":"exact"},{"name":"ecgonine methyl ester degradation","type":"exact"}],"termid":"GO:1901868"}


id: GO:0052585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a quinone or similar compound.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-NH2 group of donors, with a quinone or similar compound as acceptor (obsolete GO:0052585)","termid":"GO:0052585"}


id: GO:0045776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is decreased.","definition_xrefs":["GOC:mtg_cardio","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood pressure","synonyms":[{"name":"down regulation of blood pressure","type":"exact"},{"name":"down-regulation of blood pressure","type":"exact"},{"name":"downregulation of blood pressure","type":"exact"},{"name":"inhibition of blood pressure","type":"narrow"}],"termid":"GO:0045776"}


id: PBO:0061040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 1","termid":"PBO:0061040"}


id: MOD:00933
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative - 5-hydro-5-methylimidazol-4-one, arginine methylglyoxal arginine adduct (+54 amu)","definition_xrefs":["Unimod:319#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C3-H2-O adduct (+54 amu) of malondialdehyde with lysine or methylglyoxal with arginine.","termid":"MOD:00630"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylglyoxal arginine adduct (+54 amu)","synonyms":[{"name":"Delta:H(2)C(3)O(1)","type":"related"},{"name":"MDA adduct +54","type":"related"}],"termid":"MOD:00933"}


id: PBO:0090136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein disulfide isomerase Pdi2","termid":"PBO:0090136"}


id: GO:0047161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxymalonate + sinapoyl-CoA = CoA + sinapoyltartronate.","definition_xrefs":["EC:2.3.1.106","RHEA:10952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"tartronate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03965","MetaCyc:2.3.1.106-RXN"],"synonyms":[{"name":"hydroxycinnamoyl-coenzyme-A:tartronate hydroxycinnamoyltransferase activity","type":"related"},{"name":"sinapoyl-CoA:2-hydroxymalonate O-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"tartronate sinapoyltransferase activity","type":"related"}],"termid":"GO:0047161"}


id: GO:0001654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight.","definition_xrefs":["GOC:jid","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"visual system development","termid":"GO:0150063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye development","secondary_identifiers":["GO:0042460","Wikipedia:Eye_development"],"termid":"GO:0001654"}


id: PR:Q1MTS0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1MTS0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3B8.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.09","synonyms":[{"name":"Spom972h-utp3","type":"exact"}],"termid":"PR:Q1MTS0"}


id: PBO:0063491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1 pseudogene 2","termid":"PBO:0063491"}


id: PBO:0057528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 645","termid":"PBO:0057528"}


id: FYPO:0001557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethionine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to ethionine","synonyms":[{"name":"resistance to DL-ethionine","type":"related"},{"name":"resistance to S-ethylhomocysteine","type":"exact"},{"name":"resistance to ethionine during mitotic cell cycle","type":"related"},{"name":"resistance to ethionine during vegetative growth","type":"exact"},{"name":"resistant to ethionine","type":"exact"}],"termid":"FYPO:0001557"}


id: PBO:0001592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug66","termid":"PBO:0001592"}


id: PBO:0086739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; partially overlaps verified gene ERV2/YPR037C but doesn't share phenotypes; also overlaps dubious ORF YPR039W; null mutant displays increased levels of spontaneous Rad52p foci, increased biofilm information, different altered sensitivities to various chemcicals","termid":"PBO:0086739"}


id: PBO:0053514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 502","termid":"PBO:0053514"}


id: FYPO:0007997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches are localized to only the new end of a cell following cell division.","definition_xrefs":["PMID:15184402","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopolar actin cortical patch localization during vegetative growth","termid":"FYPO:0001019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0004803","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"monopolar actin cortical patch localization to new end","termid":"FYPO:0007997"}


id: GO:0072321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of proteins into, out of or within a cell, or between cells, mediated by chaperone molecules that bind to the transported proteins.","definition_xrefs":["GOC:mah","PMID:20378773"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperone-mediated protein transport (obsolete GO:0072321)","termid":"GO:0072321"}


id: PBO:0060964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFU1 iron-sulfur cluster scaffold pseudogene 1","termid":"PBO:0060964"}


id: PBO:0075414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome developmental regulator","termid":"PBO:0075414"}


id: PBO:0075076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 126","termid":"PBO:0075076"}


id: GO:0009953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation. The dorsal/ventral axis is defined by a line that runs orthogonal to both the anterior/posterior and left/right axes. The dorsal end is defined by the upper or back side of an organism. The ventral end is defined by the lower or front side of an organism.","definition_xrefs":["GOC:tb","GOC:go_curators","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral pattern formation","synonyms":[{"name":"dorsal-ventral pattern formation","type":"exact"},{"name":"dorsal/ventral pattern specification","type":"narrow"},{"name":"dorsoventral pattern formation","type":"exact"}],"termid":"GO:0009953"}


id: PBO:0112997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,3-mannosyltransferase; integral membrane glycoprotein of Golgi complex, required for addition of alpha1,3-mannose linkages to N-linked and O-linked oligosaccharides; one of five S. cerevisiae proteins of MNN1 family; targeted to vacuole via AP-3 pathway","termid":"PBO:0112997"}


id: GO:0075274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of zygosporangium development","termid":"GO:0075272"},{"relation_name":"negatively_regulates","term_name":"zygosporangium development","termid":"GO:0075271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of zygosporangium development","termid":"GO:0075274"}


id: PBO:0000367
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses frp1","termid":"PBO:0000367"}


id: GO:0050932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pigmented cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pigment cell differentiation","termid":"GO:0050932"}


id: GO:0009139
data:
  {"annotated_genes":["SJAG_04665","SJAG_02874","SJAG_00885","SJAG_04657","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[88533,91596,103355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[114089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[114091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[111662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine nucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate biosynthetic process","termid":"GO:0009133"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate metabolic process","termid":"GO:0009138"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_00885":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine nucleoside diphosphate anabolism","type":"exact"},{"name":"pyrimidine nucleoside diphosphate biosynthesis","type":"exact"},{"name":"pyrimidine nucleoside diphosphate formation","type":"exact"},{"name":"pyrimidine nucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009139","terms_by_termid":{"GO:0006225":null,"GO:0006227":null,"GO:0006233":null,"GO:0006240":null,"GO:0046705":null}}


id: PR:O42861
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fft3 gene.","definition_xrefs":["UniProtKB:O42861","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase fft3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25A8.01c","synonyms":[{"name":"Fun thirty-related protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fft3","type":"exact"}],"termid":"PR:O42861"}


id: GO:0141038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a phosphatidylinositol 3-kinase (PI3K).","definition_xrefs":["PMID:31686003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase regulator activity","termid":"GO:0035014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase activator activity","termid":"GO:0141038"}


id: PBO:0030950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_aggregation","termid":"PBO:0030950"}


id: PR:O60109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pho8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.13c","synonyms":[{"name":"Spom972h-pho8","type":"exact"}],"termid":"PR:O60109"}


id: PBO:0050339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 41","termid":"PBO:0050339"}


id: PBO:0062598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 8 pseudogene","termid":"PBO:0062598"}


id: PBO:0026898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_nitrogen_starvation","termid":"PBO:0026898"}


id: PBO:0051326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-14 (pseudogene)","termid":"PBO:0051326"}


id: PBO:0027172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_mitotic_interphase","termid":"PBO:0027172"}


id: PBO:0059029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 19","termid":"PBO:0059029"}


id: PBO:0073997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 4","termid":"PBO:0073997"}


id: PBO:0068911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 154, pseudogene","termid":"PBO:0068911"}


id: PBO:0042762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 55","termid":"PBO:0042762"}


id: GO:0007406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the proliferation of neuroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"},{"relation_name":"is_a","term_name":"regulation of neuroblast proliferation","termid":"GO:1902692"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"neuroblast proliferation","termid":"GO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuroblast proliferation","synonyms":[{"name":"down regulation of neuroblast proliferation","type":"exact"},{"name":"down-regulation of neuroblast proliferation","type":"exact"},{"name":"downregulation of neuroblast proliferation","type":"exact"},{"name":"inhibition of neuroblast proliferation","type":"narrow"},{"name":"suppression of neuroblast proliferation","type":"exact"}],"termid":"GO:0007406"}


id: GO:1990354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of a SUMO protein bound to a SUMO activating enzyme complex. Activation by the E1 complex and linkage to the E2 enzyme UBE2I is required for the formation of covalent bonds between SUMO and its ultimate target proteins.","definition_xrefs":["GOC:bhm","PMID:15660128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase complex","termid":"GO:0106068"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"activated SUMO-E1 ligase complex","synonyms":[{"name":"SUMO-SAE1/2 complex","type":"narrow"}],"termid":"GO:1990354"}


id: GO:0102105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: feruloylacetyl-CoA + 4-coumaryl-CoA + H2O = demethoxycurcumin + 2 coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete demethoxycurcumin synthase activity from feruloylacetyl-CoA (obsolete GO:0102105)","termid":"GO:0102105"}


id: PBO:0054225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1607","termid":"PBO:0054225"}


id: GO:0035114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of appendages are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism.","definition_xrefs":["ISBN:0582227089","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage morphogenesis","termid":"GO:0035107"},{"relation_name":"part_of","term_name":"imaginal disc-derived appendage development","termid":"GO:0048737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"}


id: GO:0018101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolysis of peptidyl-arginine to form peptidyl-citrulline.","definition_xrefs":["PMID:23175390","RESID:AA0214"],"gene_count":0,"genotype_count":0,"name":"obsolete protein citrullination (obsolete GO:0018101)","synonyms":[{"name":"deimination","type":"exact"},{"name":"peptidyl-citrulline anabolism from peptidyl-arginine","type":"exact"},{"name":"peptidyl-citrulline biosynthetic process from peptidyl-arginine","type":"exact"},{"name":"peptidyl-citrulline formation from peptidyl-arginine","type":"exact"},{"name":"peptidyl-citrulline synthesis from peptidyl-arginine","type":"exact"}],"termid":"GO:0018101"}


id: PBO:0015668
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae VHT1","termid":"PBO:0015668"}


id: PBO:0057127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR210 host gene","termid":"PBO:0057127"}


id: PBO:0038586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACAA2 pseudogene 1","termid":"PBO:0038586"}


id: PBO:0064577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POT1 antisense RNA 1","termid":"PBO:0064577"}


id: PBO:0111867
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-FYVE type","termid":"PBO:0111867"}


id: PBO:0049335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 2B (pseudogene)","termid":"PBO:0049335"}


id: GO:0016826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid sulfur-nitrogen bond.","definition_xrefs":["EC:3.10.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on acid sulfur-nitrogen bonds","synonyms":[{"name":"hydrolase activity, acting on acid sulphur-nitrogen bonds","type":"exact"}],"termid":"GO:0016826"}


id: FYPO:0007862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromeres and kinetochores remain associated with the spindle pole body during nuclear division in a that does not form a mitotic spindle or undergo cytokinesis.","definition_xrefs":["PomBase:mah","PomBase:jh","PMID:20967237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"},{"relation_name":"part_of","term_name":"nuclear division in absence of mitotic spindle","termid":"FYPO:0007859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"centromere clustering at nuclear periphery during nuclear division in absence of mitotic spindle","synonyms":[{"name":"abnormal centromere-SPB association at mitosis","type":"related"},{"name":"centromere clustering at nuclear periphery during nuclear division in absence of mitotic spindle during mitotic cell cycle","type":"related"},{"name":"centromere clustering at nuclear periphery during nuclear division in absence of mitotic spindle during vegetative growth","type":"exact"},{"name":"centromere clustering at nuclear periphery during nuclear fission","type":"exact"},{"name":"chromosome SPB attachment during nuclear fission","type":"exact"}],"termid":"FYPO:0007862"}


id: PBO:0062763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily Q member 1 pseudogene","termid":"PBO:0062763"}


id: FYPO:0001657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of serine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal serine import","synonyms":[{"name":"abnormal L-serine import","type":"exact"},{"name":"abnormal L-serine import across plasma membrane","type":"exact"},{"name":"abnormal serine import during mitotic cell cycle","type":"related"},{"name":"abnormal serine import during vegetative growth","type":"exact"},{"name":"abnormal serine import into cell","type":"exact"},{"name":"abnormal serine uptake","type":"exact"}],"termid":"FYPO:0001657"}


id: PBO:0051200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-4","termid":"PBO:0051200"}


id: PBO:0065004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 9","termid":"PBO:0065004"}


id: GO:1905625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-methionine import across plasma membrane.","definition_xrefs":["PMID:17556368","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-methionine import across plasma membrane","termid":"GO:1905624"},{"relation_name":"negatively_regulates","term_name":"L-methionine import across plasma membrane","termid":"GO:1905544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of L-methionine import across plasma membrane","termid":"GO:1905625"}


id: PBO:0034211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_intercellular_endoparasite","termid":"PBO:0034211"}


id: SO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of insertion where the inserted sequence is a mobile element.","definition_xrefs":["EBI:dvga"],"direct_ancestors":[{"relation_name":"contains","term_name":"mobile_genetic_element","termid":"SO:0001037"},{"relation_name":"is_a","term_name":"insertion","termid":"SO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_element_insertion","synonyms":[{"name":"mobile element insertion","type":"exact"}],"termid":"SO:0001837"}


id: PBO:0030040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_iron","termid":"PBO:0030040"}


id: FYPO:0000147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of establishment or maintenance of cell polarity","termid":"FYPO:0000191"},{"relation_name":"is_a","term_name":"abnormal regulation of cell growth","termid":"FYPO:0001392"},{"relation_name":"is_a","term_name":"abnormal cell polarity","termid":"FYPO:0005568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005568","FYPO:0005447"],"is_obsolete":false,"name":"abnormal NETO","synonyms":[{"name":"abnormal NETO during vegetative growth","type":"exact"},{"name":"abnormal cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"abnormal new end take-off","type":"exact"},{"name":"abnormal switch from monopolar to bipolar cell growth","type":"exact"}],"termid":"FYPO:0000147"}


id: PBO:0088442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetohydroxyacid reductoisomerase","termid":"PBO:0088442"}


id: PBO:0090052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker Mto2","termid":"PBO:0090052"}


id: PBO:0043720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B2","termid":"PBO:0043720"}


id: SO:0001247
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of synthetic nucleotides.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synthetic_oligo","synonyms":[{"name":"synthetic oligo","type":"exact"}],"termid":"SO:0001247"}


id: FYPO:0003856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to FR901464. Cells stop growing (and may die) at a concentration of FR901464 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to FR901464","synonyms":[{"name":"hypersensitive to FR901464","type":"exact"},{"name":"sensitive to FR901464 during mitotic cell cycle","type":"related"},{"name":"sensitive to FR901464 during vegetative growth","type":"exact"}],"termid":"FYPO:0003856"}


id: GO:0051396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activity of the nerve growth factor (NGF) receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of nerve growth factor receptor activity","termid":"GO:0051394"},{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nerve growth factor receptor activity","synonyms":[{"name":"activation of nerve growth factor receptor activity","type":"narrow"},{"name":"positive regulation of NGF receptor activity","type":"exact"},{"name":"stimulation of nerve growth factor receptor activity","type":"narrow"},{"name":"up regulation of nerve growth factor receptor activity","type":"exact"},{"name":"up-regulation of nerve growth factor receptor activity","type":"exact"},{"name":"upregulation of nerve growth factor receptor activity","type":"exact"}],"termid":"GO:0051396"}


id: SO:0001576
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the structure of the transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:transcript_variant","type":"exact"},{"name":"VAAST:transcript_variant","type":"exact"},{"name":"snpEff:TRANSCRIPT","type":"exact"},{"name":"transcript variant","type":"exact"}],"termid":"SO:0001576"}


id: FYPO:0005636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein from kinetochores to the spindle begins later than normal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:21920317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein localization to spindle during meiosis I","termid":"FYPO:0005635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein localization from kinetochore to spindle during meiosis I","synonyms":[{"name":"delayed onset of protein localisation from kinetochore to spindle during meiosis I","type":"exact"},{"name":"delayed onset of protein localization from kinetochore to meiosis I spindle","type":"exact"},{"name":"delayed onset of protein localization from kinetochore to meiotic spindle during meiosis I","type":"exact"},{"name":"delayed onset of protein localization from kinetochore to spindle during first meiotic nuclear division","type":"exact"},{"name":"delayed onset of protein movement from kinetochore to spindle during meiosis I","type":"related"},{"name":"delayed protein localization from kinetochore to spindle during meiosis I","type":"exact"},{"name":"delayed protein localization to meiotic spindle from kinetochore during meiosis I","type":"exact"}],"termid":"FYPO:0005636"}


id: PBO:0111873
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nedd4/Rsp5 family","termid":"PBO:0111873"}


id: PBO:0056414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCHF10 divergent transcript","termid":"PBO:0056414"}


id: GO:0052740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-2-lysophosphatidylserine + H2O = sn-glycerol-phosphoserine + a carboxylate.","definition_xrefs":["EC:3.1.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"1-acyl-2-lysophosphatidylserine acylhydrolase activity","synonyms":[{"name":"phosphatidylserine-specific phospholipase A1 activity","type":"broad"}],"termid":"GO:0052740"}


id: SO:0000821
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a chromoplast.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chromoplast_sequence","termid":"SO:0000744"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromoplast_chromosome","synonyms":[{"name":"chromoplast chromosome","type":"exact"}],"termid":"SO:0000821"}


id: PR:O13954
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H4.13c gene.","definition_xrefs":["UniProtKB:O13954","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H4.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.13c","synonyms":[{"name":"Spom972h-SPAC23H4.13c","type":"exact"}],"termid":"PR:O13954"}


id: PBO:0054644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2049","termid":"PBO:0054644"}


id: PBO:0030098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glutathione_level_during_vegetative_growth","termid":"PBO:0030098"}


id: GO:0047718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indan-1-ol + NAD(P)+ = indanone + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.112","MetaCyc:INDANOL-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indanol dehydrogenase activity","synonyms":[{"name":"indan-1-ol:NAD(P)+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047718"}


id: PBO:0077459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 184B","termid":"PBO:0077459"}


id: GO:0003082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which angiotensin directly increases the rate of natriuresis and diuresis in the kidney.","definition_xrefs":["GOC:tb","GOC:mtg_cardio","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of renal output by angiotensin (obsolete GO:0003082)","synonyms":[{"name":"angiotensin mediated positive regulation of renal output","type":"exact"},{"name":"angiotensin-mediated positive regulation of renal output","type":"exact"},{"name":"positive regulation of renal output by angiotensin","type":"exact"}],"termid":"GO:0003082"}


id: PBO:0029242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_repression_of_transcription_during_cellular_response_to_zinc","termid":"PBO:0029242"}


id: GO:1990772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of substance P, a peptide hormone that is involved in neurotransmission, inflammation, and antimicrobial activity.","definition_xrefs":["PMID:11278900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"substance P secretion","termid":"GO:1990772"}


id: GO:0009479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome c that is characteristic of green plants and transfers electrons to plastocyanin.","definition_xrefs":["PMID:1655423"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome f (obsolete GO:0009479)","synonyms":[{"name":"cytochrome f","type":"exact"}],"termid":"GO:0009479"}


id: PBO:0030636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_proton_transport","termid":"PBO:0030636"}


id: GO:1905808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synapse pruning.","definition_xrefs":["PMID:27779093","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of synapse pruning","termid":"GO:1905806"},{"relation_name":"positively_regulates","term_name":"synapse pruning","termid":"GO:0098883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synapse pruning","synonyms":[{"name":"activation of synapse disassembly","type":"narrow"},{"name":"regulation of synapse clearance","type":"broad"},{"name":"regulation of synapse disassembly","type":"broad"},{"name":"regulation of synapse elimination","type":"broad"},{"name":"regulation of synapse removal","type":"broad"},{"name":"up regulation of synapse disassembly","type":"exact"},{"name":"up-regulation of synapse disassembly","type":"exact"},{"name":"upregulation of synapse disassembly","type":"exact"}],"termid":"GO:1905808"}


id: GO:0005899
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A disulfide-bonded, heterotetrameric receptor complex. The alpha chains are entirely extracellular, while each beta chain has one transmembrane domain. The ligand binds to the alpha subunit extracellular domain and the kinase is associated with the beta subunit intracellular domain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"},{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"insulin receptor complex","termid":"GO:0005899"}


id: GO:0097743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A de novo centriole assembly process observed in multi-ciliated sperm cells of some primitive land plants, and where centrioles are formed from a blepharoplast, ultimately giving rise to multiple cilia on the sperm surface.","definition_xrefs":["GOC:cilia","PMID:25047614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"de novo centriole assembly","termid":"GO:0097742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226","GO:0044085"],"is_obsolete":false,"name":"de novo centriole assembly via blepharoplast","synonyms":[{"name":"multiciliation","type":"related"},{"name":"multiciliogenesis","type":"related"}],"termid":"GO:0097743"}


id: PBO:0070361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 37","termid":"PBO:0070361"}


id: PBO:0069160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 412, pseudogene","termid":"PBO:0069160"}


id: GO:0015925
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004557"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of galactosyl compounds, substances containing a group derived from a cyclic form of galactose or a galactose derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"galactosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015925","terms_by_termid":{"GO:0004557":null}}


id: PBO:0026902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ribonucleotide_incorporation_on_lagging_strand","termid":"PBO:0026902"}


id: PBO:0056486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MATR3 pseudogene 3","termid":"PBO:0056486"}


id: GO:0002905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mature B cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"regulates","term_name":"mature B cell apoptotic process","termid":"GO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mature B cell apoptotic process","synonyms":[{"name":"regulation of mature B cell apoptosis","type":"narrow"}],"termid":"GO:0002905"}


id: GO:0060900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a camera-type eye from unspecified neurectoderm. This process begins with the differentiation of cells that form the optic field and ends when the optic cup has attained its shape.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"embryonic camera-type eye morphogenesis","termid":"GO:0048596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic camera-type eye formation","termid":"GO:0060900"}


id: PBO:0030358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytokinesis_during_cellular_hyperosmotic_response","termid":"PBO:0030358"}


id: PBO:0079643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 16","termid":"PBO:0079643"}


id: PBO:0081529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 439","termid":"PBO:0081529"}


id: SO:0001289
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Lysidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysidine","secondary_identifiers":["http://en.wikipedia.org/wiki/Lysidine","RNAMOD:028"],"synonyms":[{"name":"k2C","type":"exact"}],"termid":"SO:0001289"}


id: PBO:0052963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynureninase pseudogene 3","termid":"PBO:0052963"}


id: PBO:0066768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 66","termid":"PBO:0066768"}


id: PR:Q9UST7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfc3 gene.","definition_xrefs":["UniProtKB:Q9UST7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor tau subunit sfc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.07","synonyms":[{"name":"Spom972h-sfc3","type":"exact"},{"name":"TFIIIC subunit sfc3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor C subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UST7"}


id: PBO:0054575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1977","termid":"PBO:0054575"}


id: PBO:0072502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 31","termid":"PBO:0072502"}


id: GO:2000420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of eosinophil extravasation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular extravasation","termid":"GO:0002692"},{"relation_name":"is_a","term_name":"negative regulation of eosinophil migration","termid":"GO:2000417"},{"relation_name":"is_a","term_name":"regulation of eosinophil extravasation","termid":"GO:2000419"},{"relation_name":"negatively_regulates","term_name":"eosinophil extravasation","termid":"GO:0072682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil extravasation","termid":"GO:2000420"}


id: PBO:0079095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 8-1","termid":"PBO:0079095"}


id: PBO:0025511
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 oxidoreductase deficiency","termid":"PBO:0025511"}


id: FYPO:0005177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the modification of a wobble base uridine residue in a tRNA to 2-thiouridine is abolished.","definition_xrefs":["PomBase:mah","GO:0003143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"},{"relation_name":"is_a","term_name":"abnormal tRNA modification","termid":"FYPO:0001765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"abolished tRNA wobble position uridine thiolation","synonyms":[{"name":"abolished tRNA wobble position uridine thiolation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA wobble position uridine thiolation during vegetative growth","type":"exact"},{"name":"abolished wobble position s2U biosynthesis","type":"exact"},{"name":"tRNA wobble position uridine thiolation abolished","type":"exact"}],"termid":"FYPO:0005177"}


id: PBO:0088333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucanosyltransferase Gas5","termid":"PBO:0088333"}


id: PBO:0063419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE3A antisense RNA 1","termid":"PBO:0063419"}


id: GO:1902820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-undecene.","definition_xrefs":["GO_REF:0000068","GOC:mengo_curators","PMID:16013377","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1-undecene metabolic process","synonyms":[{"name":"1-undecene metabolism","type":"exact"}],"termid":"GO:1902820"}


id: GO:0030990
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonmembrane-bound oligomeric protein complex that participates in bidirectional transport of molecules (cargo) along axonemal microtubules.","definition_xrefs":["GOC:kmv","PMID:22118932","PMID:23945166","GOC:cilia","PMID:14570576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"intraciliary transport particle","synonyms":[{"name":"IFT complex","type":"related"},{"name":"intraflagellar transport complex","type":"exact"},{"name":"intraflagellar transport particle","type":"exact"}],"termid":"GO:0030990"}


id: PBO:0039381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amphiphysin","termid":"PBO:0039381"}


id: GO:0141148
data:
  {"annotated_genes":["SJAG_02007"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91116],"is_not":false,"summary":null,"term":"GO:0141148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2,3-saturated acyl-[ACP] + NADP+ = a (2E)-enoyl-[ACP] + H+ + NADPH.","definition_xrefs":["RHEA:22564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enoyl-[acyl-carrier-protein] reductase activity (NAD(P)H)","termid":"GO:0016631"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"enoyl-[acyl-carrier-protein] reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.3.1.104","MetaCyc:ENOYL-ACP-REDUCT-NADPH-RXN"],"termid":"GO:0141148","terms_by_termid":{"GO:0141148":null}}


id: FYPO:0000292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects any nucleic acid metabolic process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype","termid":"FYPO:0000140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"nucleic acid metabolism phenotype","synonyms":[{"name":"fission yeast nucleic acid metabolism phenotype","type":"exact"}],"termid":"FYPO:0000292"}


id: PBO:0002532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Vps24","termid":"PBO:0002532"}


id: PBO:0000670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Der1-like (degradation in the ER) family (predicted)","termid":"PBO:0000670"}


id: GO:0050658
data:
  {"annotated_genes":["SJAG_04472","SJAG_01534","SJAG_04202","SJAG_02704","SJAG_02534","SJAG_03156","SJAG_05328","SJAG_04379","SJAG_03283","SJAG_03470","SJAG_04017","SJAG_04148","SJAG_03358","SJAG_04589","SJAG_02757","SJAG_01715","SJAG_04347","SJAG_03693","SJAG_03593","SJAG_02209","SJAG_01374","SJAG_00641","SJAG_00992","SJAG_04622","SJAG_00298","SJAG_01185","SJAG_02425","SJAG_01584","SJAG_04480","SJAG_02520","SJAG_04115","SJAG_04721","SJAG_04536","SJAG_02661","SJAG_01652","SJAG_01467","SJAG_03729","SJAG_04310","SJAG_00093","SJAG_03002","SJAG_01529","SJAG_02274","SJAG_00375","SJAG_01065","SJAG_04645","SJAG_03300","SJAG_01083","SJAG_03986","SJAG_00178","SJAG_04083","SJAG_01449","SJAG_03299","SJAG_00471","SJAG_04656","SJAG_01013","SJAG_03847"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100046,110983,101466,93210,85604,97252,99097,86723,85126,111597,113343,113468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[112514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[59093,63788,58006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051028"},{"annotations":[97492,102248,112410,106522,111081,87059,112150,107846,93058,111598,112516,100047,98749,92645,97964,98848,107212,68839,109349,110551,111891,114086,88291,101829,114985,105955,112664,98066,104789,103733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[91085,90095,92617,85136,92234,101141,96517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006405"},{"annotations":[98658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006404"},{"annotations":[101357,101831,109630,108093,85470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[95639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016031"},{"annotations":[109631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of RNA, ribonucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid transport","termid":"GO:0050657"},{"relation_name":"is_a","term_name":"establishment of RNA localization","termid":"GO:0051236"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01467":null,"SJAG_01529":null,"SJAG_01534":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_03002":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03358":null,"SJAG_03470":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"RNA transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0050658","terms_by_termid":{"GO:0006404":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0016031":null,"GO:0016973":null,"GO:0031990":null,"GO:0051028":null,"GO:0071528":null}}


id: PBO:0079023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 6-1","termid":"PBO:0079023"}


id: PBO:0062088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 19 pseudogene","termid":"PBO:0062088"}


id: PBO:0088298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Velum formation protein 1-like conserved fungal family","termid":"PBO:0088298"}


id: PBO:0067127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 173, pseudogene","termid":"PBO:0067127"}


id: GO:0009834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall after cell expansion is complete. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:lr","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"plant-type secondary cell wall biogenesis","synonyms":[{"name":"cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"secondary cell wall anabolism","type":"broad"},{"name":"secondary cell wall biogenesis","type":"exact"},{"name":"secondary cell wall biosynthetic process","type":"broad"},{"name":"secondary cell wall formation","type":"broad"},{"name":"secondary cell wall synthesis","type":"broad"}],"termid":"GO:0009834"}


id: PR:O94454
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A COP9 signalosome complex subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00362","PANTHER:PTHR10410:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome complex subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.13c","secondary_identifiers":["UniProtKB:O94454"],"synonyms":[{"name":"Spom972h-COPS5","type":"exact"}],"termid":"PR:O94454"}


id: PBO:0072330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 16","termid":"PBO:0072330"}


id: PBO:0059016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMP2 antisense RNA 1","termid":"PBO:0059016"}


id: PBO:0031010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level","termid":"PBO:0031010"}


id: GO:0102992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 2-methylbutyronitrile + NADPH + O2 = H2O + NADP + 2-hydroxy-2-methylbutyronitrile.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-methylbutyronitrile hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-9642","RHEA:51948"],"termid":"GO:0102992"}


id: PBO:0061381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 41","termid":"PBO:0061381"}


id: PBO:0061390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 50","termid":"PBO:0061390"}


id: GO:0044081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus interferes with, inhibits or disrupts a nitric oxide mediated signal transduction in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:29089430","PMID:23167250","MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host nitric oxide-mediated signaling (obsolete GO:0044081)","synonyms":[{"name":"disruption of host nitric oxide-mediated signaling","type":"exact"},{"name":"modulation by symbiont of host nitric oxide mediated signal transduction","type":"exact"},{"name":"modulation of host nitric oxide-mediated signal transduction by symbiont","type":"exact"},{"name":"modulation of host nitric oxide-mediated signaling by symbiont","type":"exact"},{"name":"modulation of host nitric oxide-mediated signalling by symbiont","type":"exact"},{"name":"regulation by symbiont of host nitric oxide-mediated signal transduction","type":"broad"},{"name":"suppression of host nitric oxide-mediated signaling","type":"exact"}],"termid":"GO:0044081"}


id: GO:0106265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 H+ + hexanoyl-CoA + 3 malonyl-CoA = 2,4,6-trihydroxyphenylhexan-1-one + 3 CO2 + 4 CoA.","definition_xrefs":["PMID:9446571","RHEA:64352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"THPH synthase activity","synonyms":[{"name":"polyketide syntase","type":"broad"}],"termid":"GO:0106265"}


id: PBO:0002918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L22 (predicted)","termid":"PBO:0002918"}


id: PBO:0055931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37B pseudogene 1","termid":"PBO:0055931"}


id: PBO:0050027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DQ alpha 2","termid":"PBO:0050027"}


id: PBO:0042883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 276","termid":"PBO:0042883"}


id: PBO:0090603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-5'-phosphatase","termid":"PBO:0090603"}


id: PR:O94316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 116 kDa U5 small nuclear ribonucleoprotein component that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23115:SF5","PRO:DNx","OMA:SCHPO03969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.12","secondary_identifiers":["UniProtKB:O94316"],"synonyms":[{"name":"114 kDa U5 small nuclear ribonucleoprotein component homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EFTUD2","type":"exact"},{"name":"complexed with cdc5 protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94316"}


id: PBO:0077491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 212","termid":"PBO:0077491"}


id: PBO:0028573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_monoseptate_cell_with_mitotic_cell_cycle_arrest_before_cell_separation","termid":"PBO:0028573"}


id: PBO:0016887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytic docking protein Mso1","termid":"PBO:0016887"}


id: PBO:0047077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member F, pseudogene","termid":"PBO:0047077"}


id: GO:0035985
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptionally-silent heterochromatin structure present in senescent cells. Contains the condensed chromatin of one chromosome and is enriched for histone modifications. Thought to repress expression of proliferation-promoting genes.","definition_xrefs":["PMID:21248468","GOC:yaf","PMID:15621527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"senescence-associated heterochromatin focus","synonyms":[{"name":"SAHF","type":"exact"},{"name":"senescence-associated heterochromatin foci","type":"exact"}],"termid":"GO:0035985"}


id: PBO:0072671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 4","termid":"PBO:0072671"}


id: FYPO:0004911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutathione into the vacuole does not occur.","definition_xrefs":["PomBase:mah","GO:0071996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished glutathione import into vacuole","synonyms":[{"name":"abolished glutathione import into vacuole during mitotic cell cycle","type":"related"},{"name":"abolished glutathione import into vacuole during vegetative growth","type":"exact"},{"name":"abolished glutathione transmembrane import into vacuole","type":"exact"},{"name":"glutathione import into vacuole abolished","type":"exact"}],"termid":"FYPO:0004911"}


id: GO:0031334
data:
  {"annotated_genes":["SJAG_00766","SJAG_00718","SJAG_01771","SJAG_00973","SJAG_01837","SJAG_03421","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85773,98481,112772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[84351,101775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001178"},{"annotations":[111278,85832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein complex assembly.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_00766":null,"SJAG_00973":null,"SJAG_01771":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03421":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of protein-containing complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein complex assembly","type":"narrow"},{"name":"positive regulation of protein complex assembly","type":"related"},{"name":"stimulation of protein complex assembly","type":"narrow"},{"name":"up regulation of protein complex assembly","type":"exact"},{"name":"up-regulation of protein complex assembly","type":"exact"},{"name":"upregulation of protein complex assembly","type":"exact"}],"termid":"GO:0031334","terms_by_termid":{"GO:0045899":null,"GO:1905561":null,"GO:2001178":null}}


id: PATO:0001388
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disomy quality inhering in a bearer by virtue of the bearer's containing two copies of the chromosome from one of the parents (with no contribution from the other parent).","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Uniparental_disomy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disomy","termid":"PATO:0001387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uniparental disomy","termid":"PATO:0001388"}


id: GO:0141042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production by a symbiont of high levels of cyclic AMP in a host cell, impairing host cellular functions in multiple ways, including ATP depletion, interference with host intracellular signaling, cytoskeletal defects and apoptosis-related cell death. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:27731909","PMID:33013916","PMID:16390441","PMID:19516256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated cAMP intoxication of host cell","synonyms":[{"name":"cAMP intoxication in host","type":"exact"}],"termid":"GO:0141042"}


id: PBO:0041361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 4 binding protein beta","termid":"PBO:0041361"}


id: PBO:0062852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoferlin","termid":"PBO:0062852"}


id: PBO:0001953
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates adg2","termid":"PBO:0001953"}


id: GO:0072213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric capsule over time, from its formation to the mature structure. The metanephric capsule is the tough fibrous layer surrounding the metanephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule development","termid":"GO:0072127"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric capsule development","termid":"GO:0072213"}


id: PBO:0068322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 20","termid":"PBO:0068322"}


id: PBO:0089494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf4","termid":"PBO:0089494"}


id: PBO:0050700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 13","termid":"PBO:0050700"}


id: PBO:0013817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein A4","termid":"PBO:0013817"}


id: PBO:0057899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3201","termid":"PBO:0057899"}


id: PBO:0000245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein","termid":"PBO:0000245"}


id: PBO:0033788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_metaphase_chromosome_recapture","termid":"PBO:0033788"}


id: PBO:0087302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Site-specific recombinase encoded on the 2-micron plasmid; required for 2-micron plasmid propagation as part of a plasmid amplification system that compensates for any copy number decreases caused by missegregation events","termid":"PBO:0087302"}


id: PBO:0028646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_meiotic_prophase_I","termid":"PBO:0028646"}


id: PBO:0087822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (65 kDa); involved in RNA polymerase II transcription initiation","termid":"PBO:0087822"}


id: PBO:0078579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 53B, pseudogene","termid":"PBO:0078579"}


id: PBO:0080405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS35 pseudogene 1","termid":"PBO:0080405"}


id: PBO:0051300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-37 (non-functional)","termid":"PBO:0051300"}


id: GO:0042666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into an ectoderm cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of ectodermal cell fate specification","termid":"GO:0042665"},{"relation_name":"negatively_regulates","term_name":"ectodermal cell fate specification","termid":"GO:0001715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ectodermal cell fate specification","synonyms":[{"name":"down regulation of ectodermal cell fate specification","type":"exact"},{"name":"down-regulation of ectodermal cell fate specification","type":"exact"},{"name":"downregulation of ectodermal cell fate specification","type":"exact"},{"name":"inhibition of ectodermal cell fate specification","type":"narrow"},{"name":"negative regulation of ectoderm cell fate specification","type":"exact"},{"name":"suppression of ectoderm cell fate","type":"exact"},{"name":"suppression of ectodermal cell fate","type":"exact"}],"termid":"GO:0042666"}


id: GO:0019653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of purine nucleobases, yielding energy in the form of ATP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006091","GO:0055086"],"is_obsolete":false,"name":"anaerobic purine nucleobase catabolic process","secondary_identifiers":["MetaCyc:P164-PWY","MetaCyc:PWY-5044","MetaCyc:PWY-5497"],"synonyms":[{"name":"anaerobic purine base catabolic process","type":"exact"},{"name":"anaerobic purine base catabolism","type":"exact"},{"name":"anaerobic purine catabolic process","type":"related"},{"name":"purine base fermentation","type":"exact"},{"name":"purine fermentation","type":"related"}],"termid":"GO:0019653"}


id: PBO:0051906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha E","termid":"PBO:0051906"}


id: PR:000050504
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TOG/XMAP215 microtubule plus end tracking polymerase Dis1 that has not been phosphorylated at the positions equivalent to Thr-279, Ser-293, Ser-300, Ser-551, Ser-556, and Ser-590 of the amino acid sequence represented by UniProtKB:Q09933. Example: UniProtKB:Q09933, Thr-279/Ser-293/Ser-300/Ser-551/Ser-556/Ser-590, PR:000026291.","definition_xrefs":["PMID:16920624","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOG/XMAP215 microtubule plus end tracking polymerase Dis1 (Schizosaccharomyces pombe)","termid":"PR:000050502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dis1/UnPhos(T279,S293,S300,S551,S556,S590)","pombase_gene_id":"SPCC736.14","synonyms":[{"name":"PomBase_original_PRO_term_name: TOG/XMAP215 microtubule plus end tracking polymerase Dis1 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-dis1/UnPhos:1","type":"exact"},{"name":"UniProtKB:Q09933, Thr-279/Ser-293/Ser-300/Ser-551/Ser-556/Ser-590, PR:000026291","type":"narrow"},{"name":"dis1/UnPhos(T279,S293,S300,S551,S556,S590)","type":"exact"}],"termid":"PR:000050504"}


id: PBO:0048863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 8","termid":"PBO:0048863"}


id: GO:0061573
data:
  {"annotated_genes":["SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112276],"is_not":false,"summary":null,"term":"GO:0061573"}]},"cv_name":"biological_process","definition":"A process of actin filament bundle distribution that results in the arrangement of actin filament bundles from the periphery toward the interior of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle distribution","termid":"GO:0070650"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"actin filament bundle retrograde transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament cable retrograde transport","type":"related"}],"termid":"GO:0061573","terms_by_termid":{"GO:0061573":null}}


id: GO:0004611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphate + oxaloacetate = phosphoenolpyruvate + CO2 + other reaction products.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase activity","synonyms":[{"name":"PEP carboxykinase activity","type":"related"},{"name":"PEPCK activity","type":"related"},{"name":"phosphopyruvate carboxylase activity","type":"related"}],"termid":"GO:0004611"}


id: PBO:0047075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member D, pseudogene","termid":"PBO:0047075"}


id: GO:0036222
data:
  {"annotated_genes":["SJAG_03797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114672],"is_not":false,"summary":null,"term":"GO:0036222"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: XTP + H2O = XMP + H+ + diphosphate.","definition_xrefs":["RHEA:28610","PMID:16216582","GOC:pz","PMID:22531138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0047429","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"XTP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.66","MetaCyc:RXN0-1603","KEGG_REACTION:R02720","MetaCyc:RXN0-5074","Reactome:R-HSA-2509831","GO:0103024"],"synonyms":[{"name":"XTP pyrophosphohydrolase activity","type":"exact"},{"name":"XTP/dITP diphosphatase","type":"related"},{"name":"XTPase activity","type":"exact"},{"name":"hypoxanthine/xanthine dNTP pyrophosphatase","type":"related"}],"termid":"GO:0036222","terms_by_termid":{"GO:0036222":null}}


id: SO:0001608
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant of a codon causing the substitution of a non conservative amino acid for another in the resulting polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid_substitution","termid":"SO:0001606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_conservative_amino_acid_substitution","synonyms":[{"name":"non conservative amino acid substitution","type":"exact"}],"termid":"SO:0001608"}


id: PBO:0073895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 13 member 1","termid":"PBO:0073895"}


id: GO:1900551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of N',N'',N'''-triacetylfusarinine C.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"N',N'',N'''-triacetylfusarinine C metabolic process","termid":"GO:1900549"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"N',N'',N'''-triacetylfusarinine C biosynthetic process","synonyms":[{"name":"N',N'',N'''-triacetylfusarinine C anabolism","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C biosynthesis","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C formation","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C synthesis","type":"exact"}],"termid":"GO:1900551"}


id: GO:0080159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the zygote irreversibly increases in size in one dimension after fertilization. An example of such a process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygote elongation","termid":"GO:0080159"}


id: PBO:0067475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 606, pseudogene","termid":"PBO:0067475"}


id: GO:0043000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi to plasma membrane CFTR protein transport (obsolete GO:0043000)","synonyms":[{"name":"Golgi to plasma membrane cystic fibrosis transmembrane conductance regulator protein transport","type":"exact"}],"termid":"GO:0043000"}


id: PBO:0054737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2146","termid":"PBO:0054737"}


id: PBO:0054413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1809","termid":"PBO:0054413"}


id: PBO:0070477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 12","termid":"PBO:0070477"}


id: PBO:0027453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_triphosphatase_activity","termid":"PBO:0027453"}


id: GO:0043318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of cytotoxic T cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell mediated cytotoxicity","termid":"GO:0001915"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of cytotoxic T cell degranulation","termid":"GO:0043317"},{"relation_name":"negatively_regulates","term_name":"cytotoxic T cell degranulation","termid":"GO:0043316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytotoxic T cell degranulation","synonyms":[{"name":"down regulation of cytotoxic T cell degranulation","type":"exact"},{"name":"down-regulation of cytotoxic T cell degranulation","type":"exact"},{"name":"downregulation of cytotoxic T cell degranulation","type":"exact"},{"name":"inhibition of cytotoxic T cell degranulation","type":"narrow"},{"name":"negative regulation of cytotoxic T cell granule exocytosis","type":"exact"},{"name":"negative regulation of cytotoxic T lymphocyte degranulation","type":"exact"},{"name":"negative regulation of cytotoxic T lymphocyte granule exocytosis","type":"exact"},{"name":"negative regulation of cytotoxic T-cell degranulation","type":"exact"},{"name":"negative regulation of cytotoxic T-cell granule exocytosis","type":"exact"},{"name":"negative regulation of cytotoxic T-lymphocyte degranulation","type":"exact"},{"name":"negative regulation of cytotoxic T-lymphocyte granule exocytosis","type":"exact"}],"termid":"GO:0043318"}


id: GO:0090534
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that carries out the reaction: ATP + H2O + Ca2+(out) = ADP + phosphate + Ca2+(in).","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation-transporting ATPase complex","termid":"GO:0090533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"calcium ion-transporting ATPase complex","termid":"GO:0090534"}


id: PBO:0089870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit, ubiquitin-specific protease subunit Rpn11","termid":"PBO:0089870"}


id: PBO:0085149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleoside diphosphate kinase; catalyzes the transfer of gamma phosphates from nucleoside triphosphates, usually ATP, to nucleoside diphosphates by a mechanism that involves formation of an autophosphorylated enzyme intermediate; protein abundance increases in response to DNA replication stress","termid":"PBO:0085149"}


id: GO:0080074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a caffeoyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"spermidine:caffeoyl CoA N-acyltransferase activity","termid":"GO:0080074"}


id: SO:0000823
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome with origin in a leucoplast.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"leucoplast_sequence","termid":"SO:0000747"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucoplast_chromosome","synonyms":[{"name":"leucoplast chromosome","type":"exact"}],"termid":"SO:0000823"}


id: PBO:0061702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 pseudogene 2","termid":"PBO:0061702"}


id: FYPO:0005446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific molecular function is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished molecular function","synonyms":[{"name":"molecular function abolished","type":"exact"}],"termid":"FYPO:0005446"}


id: GO:0051072
data:
  {"annotated_genes":["SJAG_01963","SJAG_04878","SJAG_00183","SJAG_01426"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89426,91355,96719,101847],"is_not":false,"summary":null,"term":"GO:0051072"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the pyruvylated galactose residue 4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-1,3-. The galactose residue is part of a larger polysaccharide chain.","definition_xrefs":["GOC:ai","PMID:15173185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_01426":null,"SJAG_01963":null,"SJAG_04878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"4,6-pyruvylated galactose residue biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"4,6-pyruvylated galactose residue anabolism","type":"exact"},{"name":"4,6-pyruvylated galactose residue biosynthesis","type":"exact"},{"name":"4,6-pyruvylated galactose residue formation","type":"exact"},{"name":"4,6-pyruvylated galactose residue synthesis","type":"exact"},{"name":"4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-1,3 biosynthesis","type":"exact"},{"name":"4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-1,3 biosynthetic process","type":"exact"},{"name":"PvGal biosynthesis","type":"exact"},{"name":"PvGal biosynthetic process","type":"exact"}],"termid":"GO:0051072","terms_by_termid":{"GO:0051072":null}}


id: PBO:0087457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p); this complex catalyzes nucleotide exchange on Ypt6p","termid":"PBO:0087457"}


id: FYPO:0001275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal during a cellular response to hypoxia. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein-protein interaction during cellular response to hypoxia","synonyms":[{"name":"decreased protein binding during cellular response to hypoxia","type":"exact"},{"name":"decreased protein-protein interaction in response to hypoxia","type":"related"},{"name":"reduced protein-protein interaction during cellular response to hypoxia","type":"exact"}],"termid":"FYPO:0001275"}


id: PBO:0042724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPB DNA-binding domains containing 2, pseudogene","termid":"PBO:0042724"}


id: GO:1990624
data:
  {"annotated_genes":["SJAG_02786","SJAG_03629"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88298,93345],"is_not":false,"summary":null,"term":"GO:1990624"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a guanyl nucleotide exchange factor.","definition_xrefs":["GOC:vw","PMID:25635048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02786":null,"SJAG_03629":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674","GO:0004857","GO:0140678"],"is_obsolete":false,"name":"guanyl nucleotide exchange factor inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990624","terms_by_termid":{"GO:1990624":null}}


id: GO:0060907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of macrophage cytokine production. Macrophage cytokine production is the appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage cytokine production","termid":"GO:0010935"},{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte cytokine production involved in immune response","termid":"GO:0061081"},{"relation_name":"positively_regulates","term_name":"macrophage cytokine production","termid":"GO:0010934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage cytokine production","termid":"GO:0060907"}


id: PBO:0042030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC86 antisense RNA 1","termid":"PBO:0042030"}


id: PBO:0047208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 220 member B, pseudogene","termid":"PBO:0047208"}


id: GO:0046091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyadenosine metabolic process","termid":"GO:0046090"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside biosynthetic process","termid":"GO:0046123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"deoxyadenosine biosynthetic process","synonyms":[{"name":"deoxyadenosine anabolism","type":"exact"},{"name":"deoxyadenosine biosynthesis","type":"exact"},{"name":"deoxyadenosine formation","type":"exact"},{"name":"deoxyadenosine synthesis","type":"exact"}],"termid":"GO:0046091"}


id: GO:1902975
data:
  {"annotated_genes":["SJAG_02162","SJAG_02074","SJAG_03160","SJAG_02667","SJAG_03927","SJAG_02908","SJAG_03451","SJAG_00696","SJAG_01823","SJAG_00327","SJAG_01354","SJAG_04341","SJAG_00536","SJAG_04995","SJAG_00884","SJAG_02627","SJAG_00399","SJAG_01762","SJAG_02348","SJAG_01624","SJAG_02172","SJAG_02098","SJAG_02394","SJAG_05239","SJAG_04671","SJAG_02607","SJAG_00874","SJAG_00857","SJAG_02800","SJAG_00311","SJAG_04994","SJAG_04210","SJAG_04623","SJAG_03695","SJAG_01267","SJAG_01210","SJAG_05301","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86555,88060,89077,90045,90656,93439,93542,95516,95523,99057,101413,102508,103342,103444,103935,104147,106317,106656,107479,107737,107999,108131,108535,109260,109281,109582,109667,111198,111368,111493,113417],"is_not":false,"summary":null,"term":"GO:1902975"},{"annotations":[98475,104988,93883,85483],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[99428,108134,113358],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[95460],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903466"}]},"cv_name":"biological_process","definition":"Any DNA replication initiation involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear cell cycle DNA replication initiation","termid":"GO:1902315"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00311":null,"SJAG_00327":null,"SJAG_00399":null,"SJAG_00536":null,"SJAG_00696":null,"SJAG_00857":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01210":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01624":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02162":null,"SJAG_02172":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02800":null,"SJAG_02908":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03451":null,"SJAG_03695":null,"SJAG_03927":null,"SJAG_04210":null,"SJAG_04341":null,"SJAG_04623":null,"SJAG_04671":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"mitotic DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902975","terms_by_termid":{"GO:1902975":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null}}


id: PBO:0067048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 68, pseudogene","termid":"PBO:0067048"}


id: PBO:0002552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Slc1 (predicted)","termid":"PBO:0002552"}


id: PBO:0018058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSIF transcription elongation factor complex subunit Spt4","termid":"PBO:0018058"}


id: PR:Q9URX3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A D-cysteine desulfhydrase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02270","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.03","secondary_identifiers":["UniProtKB:Q9URX3"],"synonyms":[{"name":"ACC deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ACCD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dcyD","type":"exact"}],"termid":"PR:Q9URX3"}


id: GO:0034192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-galactonate, the anion of D-galactonic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactonate metabolic process","termid":"GO:0019583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-galactonate metabolic process","synonyms":[{"name":"D-galactonate metabolism","type":"exact"}],"termid":"GO:0034192"}


id: FYPO:0004894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is decreased during sporulation.","definition_xrefs":["PomBase:mah","PMID:11069657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0002159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased 1,3-beta-D-glucan synthase activity during sporulation","synonyms":[{"name":"reduced 1,3-beta-D-glucan synthase activity during sporulation","type":"exact"}],"termid":"FYPO:0004894"}


id: PBO:0049181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GREM1 antisense RNA 1","termid":"PBO:0049181"}


id: FYPO:0000981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate dehydrogenase activity using NAD+ as a cofactor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal glutamate dehydrogenase (NAD+) activity","synonyms":[{"name":"normal NAD-GDH activity","type":"exact"}],"termid":"FYPO:0000981"}


id: GO:1905392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which a plant organ is generated and organized.","definition_xrefs":["GOC:tb","GOC:TermGenie","GO_REF:0000083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"plant organ development","termid":"GO:0099402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant organ morphogenesis","termid":"GO:1905392"}


id: PBO:0062867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTUD4 pseudogene 1","termid":"PBO:0062867"}


id: GO:0050815
data:
  {"annotated_genes":["SJAG_03118","SJAG_04933"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71485,76877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated serine residue within a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylated amino acid binding","termid":"GO:0045309"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"phosphoserine residue binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphoserine binding","type":"related"}],"termid":"GO:0050815","terms_by_termid":{"GO:1990269":null}}


id: GO:0009166
data:
  {"annotated_genes":["SJAG_03091","SJAG_02945","SJAG_03852","SJAG_00839","SJAG_01310","SJAG_06622","SJAG_03373","SJAG_04487","SJAG_02247","SJAG_00605","SJAG_02369","SJAG_00027","SJAG_02009","SJAG_04169","SJAG_05314","SJAG_03676","SJAG_04870","SJAG_02135","SJAG_02107","SJAG_04048","SJAG_02796","SJAG_03903","SJAG_00633","SJAG_03828","SJAG_04334","SJAG_04939","SJAG_00685","SJAG_02481","SJAG_06621","SJAG_03660","SJAG_04495","SJAG_04192","SJAG_00461"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[112478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[105492,112448,105024,101540,101906,101541,105486,105489,90630,99491,101905,105026,105027,105025,105490,105022,94376,91120,101539,105023,105028,105488,99749,100560,94106,105487,105491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[95942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[84844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901909"},{"annotations":[84845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901907"},{"annotations":[113171,107541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015964"},{"annotations":[95088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[95090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[100562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107671,94293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[101194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[101196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[75002,72017],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[110062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04169":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_04939":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleotide breakdown","type":"exact"},{"name":"nucleotide catabolism","type":"exact"},{"name":"nucleotide degradation","type":"exact"}],"termid":"GO:0009166","terms_by_termid":{"GO:0006096":null,"GO:0006198":null,"GO:0006256":null,"GO:0006742":null,"GO:0015938":null,"GO:0015964":null,"GO:0019677":null,"GO:0035863":null,"GO:0045820":null,"GO:0046081":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1901907":null,"GO:1901909":null,"GO:1901911":null}}


id: GO:0047368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + UDP-N-acetyl-D-galactosamine 4-sulfate = adenosine 3',5'-diphosphate + H+ + UDP-N-acetyl-D-galactosamine 4,6-disulfate.","definition_xrefs":["EC:2.8.2.7","RHEA:14337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine-4-sulfate sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R04476","MetaCyc:2.8.2.7-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:UDP-N-acetyl-D-galactosamine-4-sulfate 6-sulfotransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine-4-sulphate sulphotransferase activity","type":"exact"},{"name":"uridine diphospho-N-acetylgalactosamine 4-sulfate sulfotransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine 4-sulfate sulfotransferase activity","type":"related"}],"termid":"GO:0047368"}


id: PBO:0002542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex subunit Tim13 (predicted)","termid":"PBO:0002542"}


id: PBO:0063100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-6 family cell polarity regulator gamma","termid":"PBO:0063100"}


id: FYPO:0000575
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which gene silencing does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gene silencing","termid":"FYPO:0000574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished gene silencing","synonyms":[{"name":"abolished gene silencing during mitotic cell cycle","type":"related"},{"name":"absent silencing","type":"exact"},{"name":"gene silencing abolished","type":"exact"},{"name":"gene silencing abolished during vegetative growth","type":"exact"},{"name":"silencing: absent","type":"related"}],"termid":"FYPO:0000575"}


id: GO:0061774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Negative regulation of sister chromatid cohesion by the topological unlinking of a cohesin ring to DNA.","definition_xrefs":["GOC:dph","GOC:vw","PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"},{"relation_name":"is_a","term_name":"negative regulation of sister chromatid cohesion","termid":"GO:0045875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cohesin unloading","synonyms":[{"name":"DNA exit from the cohesin ring","type":"exact"}],"termid":"GO:0061774"}


id: GO:0035925
data:
  {"annotated_genes":["SJAG_03696","SJAG_03476","SJAG_04825","SJAG_04880","SJAG_04824","SJAG_04818","SJAG_04084","SJAG_00391","SJAG_16457","SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77676,100506,101001,101351,106031,107166,109428,110792,114374,114381],"is_not":false,"summary":null,"term":"GO:0035925"}]},"cv_name":"molecular_function","definition":"Binding to a region containing frequent adenine and uridine bases within the 3' untranslated region of a mRNA molecule or in pre-mRNA intron. The ARE-binding element consensus is UUAUUUAUU. ARE-binding proteins control the stability and/or translation of mRNAs.","definition_xrefs":["PMID:8578590","PMID:31511872","GOC:vw","PMID:7892223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA 3'-UTR binding","termid":"GO:0003730"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00391":null,"SJAG_03476":null,"SJAG_03696":null,"SJAG_04084":null,"SJAG_04682":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mRNA 3'-UTR AU-rich region binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0017091"],"synonyms":[{"name":"ARE binding","type":"related"},{"name":"AU-rich element binding","type":"related"},{"name":"adenylate/uridylate-rich element binding","type":"exact"},{"name":"mRNA 3'-UTR adenylate/uridylate-rich element binding","type":"exact"}],"termid":"GO:0035925","terms_by_termid":{"GO:0035925":null}}


id: GO:0099067
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endosome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of presynaptic endosome membrane (obsolete GO:0099067)","termid":"GO:0099067"}


id: PBO:0035803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutamate-ammonia_ligase_activity_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0035803"}


id: GO:0106032
data:
  {"annotated_genes":["SJAG_04754","SJAG_00088","SJAG_03572"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91464,102315,110393],"is_not":false,"summary":null,"term":"GO:0106032"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine in snRNA = pseudouridine in snRNA. Conversion of uridine in an snRNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["PMID:28432181","RHEA:51124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthase activity","termid":"GO:0009982"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_03572":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"snRNA pseudouridine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106032","terms_by_termid":{"GO:0106032":null}}


id: PBO:0080025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 11","termid":"PBO:0080025"}


id: PBO:0113199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the DRG family of GTP-binding proteins; associates with translating ribosomes; interacts with Tma46p, Ygr250cp, Gir2p and Yap1p via two-hybrid; localizes to cytosol and peroxisomes","termid":"PBO:0113199"}


id: PBO:0032713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_error-prone_translesion_synthesis","termid":"PBO:0032713"}


id: PBO:0030496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_iron-sulfur_cluster_binding","termid":"PBO:0030496"}


id: GO:0043629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues at the 3' end of a non-coding RNA (ncRNA) molecule. In eukaryotes, substrates include nuclear non-coding RNAs such as precursors and a variety of incorrectly processed forms of snRNAs, snoRNAs, rRNAs, and tRNAs, as well as discarded RNA fragments which have been removed from ncRNA primary transcripts. Polyadenylation of precursors is often linked to termination of transcription, but polyadenylation of RNAs targeted for degradation may also occur post-transcriptionally. This polyadenylation is important both for 3'-end processing to produce mature ncRNA species and also for targeting incorrectly processed or discarded RNA molecules for degradation.","definition_xrefs":["GOC:rn","PMID:16431988","PMID:15935758","GOC:dgf","PMID:16374505","PMID:18951092","GOC:krc","PMID:15828860"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA polyadenylation (obsolete GO:0043629)","synonyms":[{"name":"non-coding RNA polyadenylation","type":"exact"}],"termid":"GO:0043629"}


id: MOD:00287
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to a (2S,3R,4S)-3,4-dihydroxyproline.","definition_xrefs":["ChEBI:141803","DeltaMass:0","RESID:AA0282","Unimod:425#P","PubMed:12686488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated proline","termid":"MOD:00866"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3R,4S)-3,4-dihydroxyproline","synonyms":[{"name":"(2S,3R,4S)-3,4-dihydroxyproline","type":"exact"},{"name":"(2S,3R,4S)-3,4-dihydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"2,3-trans-3,4-cis-3,4-dihydroxy-L-proline","type":"exact"},{"name":"2-alpha-3-beta-4-beta-3,4-dihydroxyproline","type":"exact"},{"name":"3,4-Dihydroxylation (of Proline)","type":"exact"},{"name":"3,4-dihydroxylated L-proline","type":"exact"},{"name":"34Hy2Pro","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"MOD_RES (3R,4S)-3,4-dihydroxyproline","type":"exact"},{"name":"dihydroxy","type":"related"},{"name":"trans-2,3-cis-3,4-dihydroxy-L-proline","type":"exact"}],"termid":"MOD:00287"}


id: PBO:0056672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 30","termid":"PBO:0056672"}


id: GO:0016630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chlorophyllide a + NADP+ = protochlorophyllide + NADPH + H+.","definition_xrefs":["EC:1.3.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"protochlorophyllide reductase activity","secondary_identifiers":["MetaCyc:RXN1F-10","RHEA:11132"],"synonyms":[{"name":"NADPH-protochlorophyllide oxidoreductase activity","type":"related"},{"name":"NADPH-protochlorophyllide reductase activity","type":"related"},{"name":"NADPH2-protochlorophyllide oxidoreductase activity","type":"related"},{"name":"chlorophyllide-a:NADP+ 7,8-oxidoreductase activity","type":"related"},{"name":"protochlorophyllide oxidoreductase activity","type":"related"},{"name":"protochlorophyllide photooxidoreductase activity","type":"related"}],"termid":"GO:0016630"}


id: GO:0035771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-4 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-4","termid":"GO:0071353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-4-mediated signaling pathway","synonyms":[{"name":"IL-4-mediated signaling pathway","type":"exact"},{"name":"interleukin-4-mediated signalling pathway","type":"exact"}],"termid":"GO:0035771"}


id: GO:2000066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cortisol biosynthetic process.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid biosynthetic process","termid":"GO:0031948"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"is_a","term_name":"regulation of cortisol biosynthetic process","termid":"GO:2000064"},{"relation_name":"positively_regulates","term_name":"cortisol biosynthetic process","termid":"GO:0034651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cortisol biosynthetic process","synonyms":[{"name":"positive regulation of cortisol anabolism","type":"related"},{"name":"positive regulation of cortisol biosynthesis","type":"exact"},{"name":"positive regulation of cortisol formation","type":"exact"},{"name":"positive regulation of cortisol synthesis","type":"exact"}],"termid":"GO:2000066"}


id: PBO:0017485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bearer_of","termid":"PBO:0017485"}


id: SO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a lysine anticodon, and a 3' lysine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"lysine_tRNA_primary_transcript","termid":"SO:0000222"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl_tRNA","synonyms":[{"name":"lysyl tRNA","type":"exact"},{"name":"lysyl-transfer RNA","type":"exact"},{"name":"lysyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000265"}


id: GO:0016361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with activin-bound type II activin receptor to initiate a change in cell activity; upon binding, acts as a downstream transducer of activin signals.","definition_xrefs":["GOC:mah","PMID:8622651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin receptor activity","termid":"GO:0017002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0016301","GO:0003824","GO:0004672","GO:0016740","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"activin receptor activity, type I","synonyms":[{"name":"type I activin receptor activity","type":"exact"}],"termid":"GO:0016361"}


id: PBO:0082289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginase, catabolizes arginine to ornithine and urea; expression responds to both induction by arginine and nitrogen catabolite repression; disruption decreases production of carcinogen ethyl carbamate during wine fermentation and also enhances freeze tolerance","termid":"PBO:0082289"}


id: FYPO:0002976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is decreased during a cellular response to hydroxyurea.","definition_xrefs":["PMID:24006488","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at MCB promoters during vegetative growth","termid":"FYPO:0005314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to chromatin at MCB promoters during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein localisation to chromatin at MCB promoters during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein localization to chromatin at MCB promoters during cellular response to HU","type":"exact"},{"name":"decreased protein localization to chromatin at MCB promoters during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at MCB promoters during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at MCB target genes during cellular response to hydroxyurea","type":"related"},{"name":"decreased protein localization to chromatin at MCB-containing promoters during cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein localization to chromatin at MCB promoters during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002976"}


id: PBO:0070774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 4","termid":"PBO:0070774"}


id: PBO:0031353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_rapamycin","termid":"PBO:0031353"}


id: FYPO:0003785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one nucleus and no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0000032","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"aseptate mononucleate vegetative cell","synonyms":[{"name":"aseptate mononucleate cell during vegetative growth","type":"exact"},{"name":"aseptate mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"mononucleate aseptate vegetative cell","type":"exact"},{"name":"unseptated mononucleate vegetative cell","type":"exact"}],"termid":"FYPO:0003785"}


id: GO:0001704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the ectoderm, mesoderm and endoderm during gastrulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of primary germ layer","termid":"GO:0001704"}


id: GO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the activation of the membrane attack complex components of the complement cascade.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activation of membrane attack complex","termid":"GO:0001969"},{"relation_name":"is_a","term_name":"positive regulation of complement activation","termid":"GO:0045917"},{"relation_name":"positively_regulates","term_name":"activation of membrane attack complex","termid":"GO:0001905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activation of membrane attack complex","synonyms":[{"name":"activation of activation of membrane attack complex","type":"narrow"},{"name":"positive regulation of MAC assembly","type":"exact"},{"name":"positive regulation of MAC formation","type":"exact"},{"name":"positive regulation of activation of MAC","type":"exact"},{"name":"positive regulation of activation of TCC","type":"narrow"},{"name":"positive regulation of activation of terminal complement complex","type":"narrow"},{"name":"positive regulation of activation of the terminal complement cascade","type":"narrow"},{"name":"positive regulation of membrane attack complex assembly","type":"exact"},{"name":"positive regulation of membrane attack complex formation","type":"exact"},{"name":"stimulation of activation of membrane attack complex","type":"narrow"},{"name":"up regulation of activation of membrane attack complex","type":"exact"},{"name":"up-regulation of activation of membrane attack complex","type":"exact"},{"name":"upregulation of activation of membrane attack complex","type":"exact"}],"termid":"GO:0001970"}


id: GO:0051894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of focal adhesion assembly, the establishment and maturation of focal adhesions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-matrix adhesion","termid":"GO:0001954"},{"relation_name":"is_a","term_name":"regulation of focal adhesion assembly","termid":"GO:0051893"},{"relation_name":"is_a","term_name":"positive regulation of cell-substrate junction organization","termid":"GO:0150117"},{"relation_name":"is_a","term_name":"positive regulation of cell junction assembly","termid":"GO:1901890"},{"relation_name":"positively_regulates","term_name":"focal adhesion assembly","termid":"GO:0048041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155","GO:0044085"],"is_obsolete":false,"name":"positive regulation of focal adhesion assembly","synonyms":[{"name":"activation of focal adhesion formation","type":"narrow"},{"name":"stimulation of focal adhesion formation","type":"narrow"},{"name":"up regulation of focal adhesion formation","type":"exact"},{"name":"up-regulation of focal adhesion formation","type":"exact"},{"name":"upregulation of focal adhesion formation","type":"exact"}],"termid":"GO:0051894"}


id: PBO:0029977
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_export_from_nucleus","termid":"PBO:0029977"}


id: PR:O59732
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cfh4 gene.","definition_xrefs":["UniProtKB:O59732","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.12c","synonyms":[{"name":"Chs four homolog 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cfh4","type":"exact"}],"termid":"PR:O59732"}


id: PBO:0068977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 221, pseudogene","termid":"PBO:0068977"}


id: PATO:0002526
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anterodistally.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterodistal orientation","synonyms":[{"name":"antero-distal orientation","type":"exact"}],"termid":"PATO:0002526"}


id: PBO:0066529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RGPD4 antisense RNA 1 (head to head)","termid":"PBO:0066529"}


id: PBO:0089887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein, claudin Dni1","termid":"PBO:0089887"}


id: SO:0002019
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where at least one base in the start codon is changed, but the start remains.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"initiator_codon_variant","termid":"SO:0001582"},{"relation_name":"is_a","term_name":"synonymous_variant","termid":"SO:0001819"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"start_retained_variant","synonyms":[{"name":"snpEff:SYNONYMOUS_START","type":"exact"}],"termid":"SO:0002019"}


id: GO:1900666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of emodin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of emodin biosynthetic process","termid":"GO:1900664"},{"relation_name":"positively_regulates","term_name":"emodin biosynthetic process","termid":"GO:1900575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of emodin biosynthetic process","synonyms":[{"name":"activation of emodin anabolism","type":"exact"},{"name":"activation of emodin biosynthesis","type":"exact"},{"name":"activation of emodin biosynthetic process","type":"narrow"},{"name":"activation of emodin formation","type":"exact"},{"name":"activation of emodin synthesis","type":"exact"},{"name":"positive regulation of emodin anabolism","type":"exact"},{"name":"positive regulation of emodin biosynthesis","type":"exact"},{"name":"positive regulation of emodin formation","type":"exact"},{"name":"positive regulation of emodin synthesis","type":"exact"},{"name":"up regulation of emodin anabolism","type":"exact"},{"name":"up regulation of emodin biosynthesis","type":"exact"},{"name":"up regulation of emodin biosynthetic process","type":"exact"},{"name":"up regulation of emodin formation","type":"exact"},{"name":"up regulation of emodin synthesis","type":"exact"},{"name":"up-regulation of emodin anabolism","type":"exact"},{"name":"up-regulation of emodin biosynthesis","type":"exact"},{"name":"up-regulation of emodin biosynthetic process","type":"exact"},{"name":"up-regulation of emodin formation","type":"exact"},{"name":"up-regulation of emodin synthesis","type":"exact"},{"name":"upregulation of emodin anabolism","type":"exact"},{"name":"upregulation of emodin biosynthesis","type":"exact"},{"name":"upregulation of emodin biosynthetic process","type":"exact"},{"name":"upregulation of emodin formation","type":"exact"},{"name":"upregulation of emodin synthesis","type":"exact"}],"termid":"GO:1900666"}


id: PBO:0049400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 1A","termid":"PBO:0049400"}


id: GO:1990414
data:
  {"annotated_genes":["SJAG_01067","SJAG_03926","SJAG_04039","SJAG_00796"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74191,86173,92349,112961],"is_not":false,"summary":null,"term":"GO:1990414"}]},"cv_name":"biological_process","definition":"The repair of a replication-born double-strand DNA break in which the DNA molecule is repaired using the homologous sequence of the sister chromatid which serves as a template to repair the breaks.","definition_xrefs":["PMID:16888651","PMID:12820977","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00796":null,"SJAG_01067":null,"SJAG_03926":null,"SJAG_04039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"replication-born double-strand break repair via sister chromatid exchange","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"replication-born DSB repair by SCE","type":"exact"}],"termid":"GO:1990414","terms_by_termid":{"GO:1990414":null}}


id: PBO:0036460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase, human carnosine N-methyltransferase ortholog","termid":"PBO:0036460"}


id: PBO:0031841
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_endoplasmic_reticulum_morphology","termid":"PBO:0031841"}


id: PBO:0013798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, nucleoporin Nup37","termid":"PBO:0013798"}


id: PBO:0056237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated guanylate kinase, WW and PDZ domain containing 3","termid":"PBO:0056237"}


id: PBO:0066288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member N, pseudogene","termid":"PBO:0066288"}


id: FYPO:0007176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abolished during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to plasma membrane at cell division site during vegetative growth","termid":"FYPO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane at cell division site during mitosis","synonyms":[{"name":"abolished protein localisation to plasma membrane at cell division site during mitosis","type":"exact"},{"name":"abolished protein localization in plasma membrane at cell division site during mitosis","type":"exact"},{"name":"abolished protein localization to cell membrane at cell division site during mitosis","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during mitotic M phase","type":"related"},{"name":"abolished protein localization to plasma membrane at cell division site during mitotic nuclear division","type":"exact"},{"name":"protein localization to plasma membrane at cell division site abolished during mitosis","type":"exact"}],"termid":"FYPO:0007176"}


id: PBO:0043910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine receptor like factor 3","termid":"PBO:0043910"}


id: PBO:0030949
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_aggregation_at_cell_tip","termid":"PBO:0030949"}


id: GO:0000272
data:
  {"annotated_genes":["SJAG_02478","SJAG_04327","SJAG_01561","SJAG_03851","SJAG_04963","SJAG_02131","SJAG_05001","SJAG_03824","SJAG_01017","SJAG_00115","SJAG_06309","SJAG_02076","SJAG_03444","SJAG_02649","SJAG_00620","SJAG_00667","SJAG_01171","SJAG_03295","SJAG_02718","SJAG_01888","SJAG_03646","SJAG_01783"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66143,83583,92216,92217,104490,111709],"is_not":false,"summary":null,"term":"GO:0000272"},{"annotations":[107407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072316"},{"annotations":[115448,85218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030995"},{"annotations":[96245,90123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044347"},{"annotations":[107409,90125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072000"},{"annotations":[98050,98051,84418,102784,104168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009251"},{"annotations":[99408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[94710,86202,105867,93716,104744,96385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["PMID:33139480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00620":null,"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_01888":null,"SJAG_02076":null,"SJAG_02131":null,"SJAG_02478":null,"SJAG_02649":null,"SJAG_02718":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_03824":null,"SJAG_03851":null,"SJAG_04327":null,"SJAG_04963":null,"SJAG_05001":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"polysaccharide catabolic process","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:24699070":null},"secondary_identifiers":["GO:0044244"],"synonyms":[{"name":"multicellular organismal polysaccharide catabolic process","type":"narrow"},{"name":"polysaccharide breakdown","type":"exact"},{"name":"polysaccharide catabolism","type":"exact"},{"name":"polysaccharide degradation","type":"exact"}],"termid":"GO:0000272","terms_by_termid":{"GO:0000272":null,"GO:0005980":null,"GO:0009251":null,"GO:0030995":null,"GO:0044347":null,"GO:0061723":null,"GO:0072000":null,"GO:0072316":null}}


id: GO:0097747
data:
  {"annotated_genes":["SJAG_02627","SJAG_01713","SJAG_04030","SJAG_04106","SJAG_16460","SJAG_04894","SJAG_03468","SJAG_00458","SJAG_01765","SJAG_02070","SJAG_01562","SJAG_04408","SJAG_03144","SJAG_02600","SJAG_03014","SJAG_01313","SJAG_00619","SJAG_02101","SJAG_02653","SJAG_00637","SJAG_04934","SJAG_00399","SJAG_03035","SJAG_02506","SJAG_00119","SJAG_04261","SJAG_00731","SJAG_04994","SJAG_03761","SJAG_04161","SJAG_03356","SJAG_03181","SJAG_03578","SJAG_03921","SJAG_01444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99059,101415,95517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003896"},{"annotations":[112861,90202,111757,85681,91987,97607,101879,98638,109906,97880,88137,112552,91242,105878,100964,90015,97646,105371,108478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003899"},{"annotations":[88138,101880,106781,99448,110312,98785,90016,85682,109246,109907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001054"},{"annotations":[110761,92924,90017,101881,103803,88139,99449,90205,109908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001055"},{"annotations":[85683,94266,98786,99450,101882,104538,90018,88140,89114,107570,109909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001056"},{"annotations":[95665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003968"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1); the synthesis of RNA from ribonucleotide triphosphates in the presence of a nucleic acid template.","definition_xrefs":["GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00399":null,"SJAG_00458":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02506":null,"SJAG_02600":null,"SJAG_02627":null,"SJAG_02653":null,"SJAG_03014":null,"SJAG_03035":null,"SJAG_03144":null,"SJAG_03181":null,"SJAG_03356":null,"SJAG_03468":null,"SJAG_03578":null,"SJAG_03761":null,"SJAG_03921":null,"SJAG_04030":null,"SJAG_04106":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04408":null,"SJAG_04894":null,"SJAG_04934":null,"SJAG_04994":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779","GO:0140098"],"is_obsolete":false,"name":"RNA polymerase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097747","terms_by_termid":{"GO:0001054":null,"GO:0001055":null,"GO:0001056":null,"GO:0003896":null,"GO:0003899":null,"GO:0003968":null}}


id: GO:2000694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phragmoplast microtubule organization.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"phragmoplast microtubule organization","termid":"GO:0080175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"regulation of phragmoplast microtubule organization","synonyms":[{"name":"regulation of phragmoplast microtubule cytoskeleton organization","type":"exact"},{"name":"regulation of phragmoplast microtubule organisation","type":"exact"}],"termid":"GO:2000694"}


id: PBO:0059270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L34","termid":"PBO:0059270"}


id: PBO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Latrunculin Sensitive Kinase","termid":"PBO:0002305"}


id: PBO:0052352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 4B","termid":"PBO:0052352"}


id: GO:0033962
data:
  {"annotated_genes":["SJAG_03070","SJAG_03460","SJAG_02213","SJAG_03157","SJAG_02638","SJAG_04640","SJAG_03023"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88644,101666,102220,104635,108099,108253,108985],"is_not":false,"summary":null,"term":"GO:0033962"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a cytoplasmic mRNA processing body.","definition_xrefs":["GOC:mah","PMID:17429074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-membrane-bounded organelle assembly","termid":"GO:0140694"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02213":null,"SJAG_02638":null,"SJAG_03023":null,"SJAG_03070":null,"SJAG_03157":null,"SJAG_03460":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"P-body assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"P body assembly","type":"exact"},{"name":"P body biogenesis","type":"related"},{"name":"cytoplasmic mRNA processing body assembly","type":"exact"}],"termid":"GO:0033962","terms_by_termid":{"GO:0033962":null}}


id: MOD:01939
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an aspartic acid and the following cysteine residue with the formation of (2-aminosuccinimidyl)-3-sulfanylpropanoic acid and the loss of a water molecule.","definition_xrefs":["RESID:AA0592#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-(2-aminosuccinimidyl)-3-sulfanylpropanoic acid","termid":"MOD:01945"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(2-aminosuccinimidyl)-3-sulfanylpropanoic acid (Asp)","synonyms":[{"name":"(2R)-2-[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]-3-sulfanylpropanoic acid","type":"exact"},{"name":"2-(2-aminosuccinimidyl)-3-sulfanylpropanoic acid","type":"exact"},{"name":"aspartimide cysteine","type":"exact"}],"termid":"MOD:01939"}


id: GO:0034145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 4 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 4 signaling pathway","termid":"GO:0034143"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 4 signaling pathway","synonyms":[{"name":"positive regulation of TLR4 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034145"}


id: PBO:0044681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible transcript 4","termid":"PBO:0044681"}


id: GO:0045723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid metabolic process","termid":"GO:0045923"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"positively_regulates","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"positive regulation of fatty acid biosynthetic process","synonyms":[{"name":"activation of fatty acid biosynthetic process","type":"narrow"},{"name":"positive regulation of fatty acid anabolism","type":"exact"},{"name":"positive regulation of fatty acid biosynthesis","type":"exact"},{"name":"positive regulation of fatty acid formation","type":"exact"},{"name":"positive regulation of fatty acid synthesis","type":"exact"},{"name":"stimulation of fatty acid biosynthetic process","type":"narrow"},{"name":"up regulation of fatty acid biosynthetic process","type":"exact"},{"name":"up-regulation of fatty acid biosynthetic process","type":"exact"},{"name":"upregulation of fatty acid biosynthetic process","type":"exact"}],"termid":"GO:0045723"}


id: PR:Q10364
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sck2 gene.","definition_xrefs":["UniProtKB:Q10364","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase sck2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.14c","synonyms":[{"name":"Spom972h-sck2","type":"exact"}],"termid":"PR:Q10364"}


id: PBO:0086990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressor of translation initiation; binds eIF4G through its RGG domain and inhibits recruitment of the preinitiation complex; also contains an Lsm domain; may have a role in RNA processing; overproduction suppresses null mutation in clathrin heavy chain gene CHC1; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0086990"}


id: PR:O13942
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H3.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.12c","synonyms":[{"name":"Spom972h-SPAC23H3.12c","type":"exact"}],"termid":"PR:O13942"}


id: PBO:0044476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 19 subfamily A member 1","termid":"PBO:0044476"}


id: GO:1904257
data:
  {"annotated_genes":["SJAG_00328","SJAG_03528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86563,100413],"is_not":false,"summary":null,"term":"GO:1904257"}]},"cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol across the Golgi membrane into the Golgi lumen.","definition_xrefs":["PMID:25732056","GOC:TermGenie","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"},{"relation_name":"is_a","term_name":"cytosol to Golgi apparatus transport","termid":"GO:0140820"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00328":null,"SJAG_03528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"zinc ion import into Golgi lumen","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytosol to Golgi apparatus zinc transport","type":"exact"},{"name":"zinc II ion import across Golgi membrane","type":"exact"},{"name":"zinc ion import across Golgi membrane","type":"exact"},{"name":"zinc ion import into Golgi apparatus","type":"exact"},{"name":"zinc ion import into Golgi membrane","type":"related"},{"name":"zinc(2+) import across Golgi membrane","type":"exact"}],"termid":"GO:1904257","terms_by_termid":{"GO:1904257":null}}


id: PBO:0067488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 622, pseudogene","termid":"PBO:0067488"}


id: PBO:0062303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 14 pseudogene","termid":"PBO:0062303"}


id: GO:0098909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell contributing to the regulation of its contraction.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"part_of","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell action potential involved in regulation of contraction","termid":"GO:0098909"}


id: GO:0042626
data:
  {"annotated_genes":["SJAG_02399","SJAG_03497","SJAG_01397","SJAG_03358","SJAG_01597","SJAG_01129","SJAG_01344","SJAG_01447","SJAG_04167","SJAG_04757","SJAG_03502","SJAG_02023","SJAG_00136","SJAG_02602","SJAG_01471","SJAG_00212","SJAG_04955","SJAG_01879","SJAG_01400","SJAG_03415","SJAG_02457","SJAG_02782","SJAG_03785","SJAG_01817","SJAG_05213","SJAG_03850","SJAG_04277","SJAG_03363","SJAG_03866","SJAG_01435","SJAG_00373","SJAG_03560","SJAG_05294","SJAG_00516","SJAG_04015","SJAG_01669","SJAG_02077","SJAG_03406","SJAG_01913","SJAG_03515","SJAG_04258"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114273],"is_not":false,"summary":null,"term":"GO:0042626"},{"annotations":[85394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140481"},{"annotations":[104762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[103281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015421"},{"annotations":[114270,93166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044604"},{"annotations":[108444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140679"},{"annotations":[96982,97691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140359"},{"annotations":[114021,92181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008559"},{"annotations":[111180,91566,97121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019829"},{"annotations":[104766,97734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[103955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[111181,97123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015662"},{"annotations":[103956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[108447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008556"},{"annotations":[108448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[83839,109877,83840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[108449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[91567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140358"},{"annotations":[87008,107898,92996,96421,103670,101270,95642,99390,103692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"},{"annotations":[92729,105970,85972,96039,88154,84174,86282,96116,91767,95020,98772,100017,114792,97740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Primary active transporter of a solute across a membrane, via the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of a substance across a membrane. The transport protein may be transiently phosphorylated (P-type transporters), or not (ABC-type transporters and other families of transporters). Primary active transport occurs up the solute's concentration gradient and is driven by a primary energy source.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary active transmembrane transporter activity","termid":"GO:0015399"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00373":null,"SJAG_00516":null,"SJAG_01129":null,"SJAG_01344":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01597":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01879":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02077":null,"SJAG_02399":null,"SJAG_02457":null,"SJAG_02602":null,"SJAG_02782":null,"SJAG_03358":null,"SJAG_03363":null,"SJAG_03406":null,"SJAG_03415":null,"SJAG_03497":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03785":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_04015":null,"SJAG_04167":null,"SJAG_04258":null,"SJAG_04277":null,"SJAG_04757":null,"SJAG_04955":null,"SJAG_05213":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:7.2.2.-","Reactome:R-HSA-9759461","GO:0016820","Reactome:R-HSA-9753278","Reactome:R-HSA-9033505","Reactome:R-HSA-9033499","Reactome:R-HSA-9750546","Reactome:R-HSA-9759454","Reactome:R-HSA-9753284","Reactome:R-HSA-9794120","Reactome:R-HSA-2161506","Reactome:R-HSA-9659680","Reactome:R-HSA-9794572","Reactome:R-HSA-9750617","GO:0043492","Reactome:R-HSA-1467457","GO:0015405","Reactome:R-HSA-9753283","Reactome:R-HSA-2161538"],"synonyms":[{"name":"ATP-coupled transmembrane transporter activity","type":"exact"},{"name":"ATP-dependent transmembrane transporter activity","type":"exact"},{"name":"ATPase activity, coupled to movement of substances","type":"broad"},{"name":"ATPase activity, coupled to transmembrane movement of substances","type":"exact"},{"name":"P-P-bond-hydrolysis-driven transmembrane transporter activity","type":"broad"},{"name":"P-P-bond-hydrolysis-driven transporter","type":"broad"},{"name":"hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances","type":"narrow"}],"termid":"GO:0042626","terms_by_termid":{"GO:0005388":null,"GO:0008553":null,"GO:0008554":null,"GO:0008556":null,"GO:0008559":null,"GO:0008900":null,"GO:0015410":null,"GO:0015421":null,"GO:0015450":null,"GO:0015662":null,"GO:0019829":null,"GO:0042626":null,"GO:0043682":null,"GO:0044604":null,"GO:0046961":null,"GO:0140358":null,"GO:0140359":null,"GO:0140481":null,"GO:0140581":null,"GO:0140679":null}}


id: GO:0047073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4'-dihydroxyacetophenone + O2 = 4-hydroxybenzoate + formate + 2 H+.","definition_xrefs":["RHEA:24416","EC:1.13.11.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,4'-dihydroxyacetophenone dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R01305","MetaCyc:1.13.11.41-RXN","UM-BBD_reactionID:r1410"],"synonyms":[{"name":"(4-hydroxybenzoyl)methanol oxygenase activity","type":"related"},{"name":"2,4'-dihydroxyacetophenone oxidoreductase (C-C-bond-cleaving)","type":"related"}],"termid":"GO:0047073"}


id: PBO:0029086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tRNA_(guanine(9)-N(1))-methyltransferase_activity","termid":"PBO:0029086"}


id: PBO:0060354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin XIX","termid":"PBO:0060354"}


id: GO:1904478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intestinal absorption.","definition_xrefs":["PMID:12469120","GO_REF:0000058","GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal absorption","termid":"GO:1904478"}


id: GO:0003227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the right ventricular myocardium are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"right ventricular cardiac muscle tissue morphogenesis","termid":"GO:0003221"},{"relation_name":"is_a","term_name":"ventricular trabecula myocardium morphogenesis","termid":"GO:0003222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right ventricular trabecular myocardium morphogenesis","termid":"GO:0003227"}


id: PBO:0089781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery involved in ribosome biogenesis protein Lto1","termid":"PBO:0089781"}


id: PBO:0057324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519d","termid":"PBO:0057324"}


id: PBO:0026808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_micafungin","termid":"PBO:0026808"}


id: PBO:0075566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-B transcription factor","termid":"PBO:0075566"}


id: PBO:0059740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 14","termid":"PBO:0059740"}


id: PBO:0059168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPV17L2 pseudogene 1","termid":"PBO:0059168"}


id: PBO:0046925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 43 member A","termid":"PBO:0046925"}


id: PBO:0049646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.Y histone 2","termid":"PBO:0049646"}


id: PBO:0060723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A10","termid":"PBO:0060723"}


id: PBO:0042542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 8 pseudogene 1","termid":"PBO:0042542"}


id: GO:0050315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: synephrine = (4-hydroxyphenyl)acetaldehyde + methylammonium.","definition_xrefs":["EC:4.2.1.88","RHEA:32203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"synephrine dehydratase activity","secondary_identifiers":["MetaCyc:SYNEPHRINE-DEHYDRATASE-RXN","KEGG_REACTION:R03359"],"synonyms":[{"name":"1-(4-hydroxyphenyl)-2-(methylamino)ethanol hydro-lyase (methylamine-forming)","type":"related"}],"termid":"GO:0050315"}


id: FYPO:0001446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of trehalose measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered cellular trehalose level","synonyms":[{"name":"abnormal cellular trehalose accumulation","type":"related"},{"name":"abnormal cellular trehalose level","type":"exact"}],"termid":"FYPO:0001446"}


id: PBO:0029992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_thiamine_starvation","termid":"PBO:0029992"}


id: PBO:0029588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_binding","termid":"PBO:0029588"}


id: GO:0010694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of alkaline phosphatase activity, the catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alkaline phosphatase activity","termid":"GO:0010692"},{"relation_name":"is_a","term_name":"positive regulation of phosphatase activity","termid":"GO:0010922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of alkaline phosphatase activity","termid":"GO:0010694"}


id: PBO:0070440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase A","termid":"PBO:0070440"}


id: MOD:01034
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a 4-nitrophenyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-nitrophenyl modified residue","synonyms":[{"name":"ONp","type":"exact"},{"name":"p-nitrophenyl","type":"exact"}],"termid":"MOD:01034"}


id: PBO:0013769
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EXOC1","termid":"PBO:0013769"}


id: GO:0046642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of alpha-beta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell proliferation","termid":"GO:0046640"},{"relation_name":"negatively_regulates","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of alpha-beta T cell proliferation","synonyms":[{"name":"down regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"down-regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"downregulation of alpha-beta T cell proliferation","type":"exact"},{"name":"inhibition of alpha-beta T cell proliferation","type":"narrow"},{"name":"negative regulation of alpha-beta T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of alpha-beta T-cell proliferation","type":"exact"},{"name":"negative regulation of alpha-beta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046642"}


id: GO:0048151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The excessive phosphorylation of a protein, as a result of activation of kinases, deactivation of phosphatases, or both.","definition_xrefs":["GOC:jid","PMID:12859672","ISBN:039751820X"],"gene_count":0,"genotype_count":0,"name":"obsolete hyperphosphorylation (obsolete GO:0048151)","synonyms":[{"name":"hyperphosphorylation","type":"exact"}],"termid":"GO:0048151"}


id: PBO:0052343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF1C antisense RNA 1","termid":"PBO:0052343"}


id: PBO:0064891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bdelta pseudogene 1","termid":"PBO:0064891"}


id: FYECO:0000249
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which copper(II) sulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CuSO4","synonyms":[{"name":"+ copper(II) sulfate","type":"exact"}],"termid":"FYECO:0000249"}


id: PBO:0004598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MYND type","termid":"PBO:0004598"}


id: PBO:0089605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingoid long chain base kinase","termid":"PBO:0089605"}


id: PBO:0030745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_phosphatidylinositol-3-phosphate_level","termid":"PBO:0030745"}


id: GO:0036115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group.","definition_xrefs":["PMID:10578051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate catabolic process","termid":"GO:0034031"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate catabolic process","termid":"GO:0034034"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0044248","GO:0006790","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"fatty-acyl-CoA catabolic process","synonyms":[{"name":"fatty-acyl-CoA breakdown","type":"exact"},{"name":"fatty-acyl-CoA catabolism","type":"exact"},{"name":"fatty-acyl-CoA degradation","type":"exact"}],"termid":"GO:0036115"}


id: MOD:00741
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a nickel atom or a cluster containing nickel for hydrogen atoms, or that coordinates a nickel ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nickel containing modified residue","synonyms":[{"name":"NiRes","type":"exact"}],"termid":"MOD:00741"}


id: GO:0099581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any ATPase coupled ion transmembrane transporter activity, occurring in the postsynaptic membrane, that is involved in regulation of postsynaptic membrane potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled ion transmembrane transporter activity","termid":"GO:0042625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ATPase coupled ion transmembrane transporter activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"ATPase coupled ion transmembrane transporter activity involved in regulation of post-synaptic membrane potential","type":"exact"},{"name":"ATPase-coupled ion transmembrane transporter activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0099581"}


id: PBO:0052176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 6","termid":"PBO:0052176"}


id: PBO:0109606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A13","termid":"PBO:0109606"}


id: PBO:0070334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 6","termid":"PBO:0070334"}


id: GO:0046520
data:
  {"annotated_genes":["SJAG_01057","SJAG_00880","SJAG_04178","SJAG_02305","SJAG_02429","SJAG_02706"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105812,93772,88876,93013,102069,101626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingoids, any of a class of compounds comprising sphinganine and its homologues and stereoisomers, and derivatives of these compounds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01057":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphingoid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sphingoid anabolism","type":"exact"},{"name":"sphingoid biosynthesis","type":"exact"},{"name":"sphingoid formation","type":"exact"},{"name":"sphingoid synthesis","type":"exact"}],"termid":"GO:0046520","terms_by_termid":{"GO:0046512":null}}


id: GO:0036279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm in response to deprivation of glucose.","definition_xrefs":["PMID:3541942","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to glucose starvation","termid":"GO:0042149"},{"relation_name":"is_a","term_name":"positive regulation of protein export from nucleus","termid":"GO:0046827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"positive regulation of protein export from nucleus in response to glucose starvation","termid":"GO:0036279"}


id: GO:0016014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex comprising alpha- and beta-dystrobrevin; forms part of the dystrophin glycoprotein complex.","definition_xrefs":["PMID:15117830","PMID:16710609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"dystrophin-associated glycoprotein complex","termid":"GO:0016010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"dystrobrevin complex","termid":"GO:0016014"}


id: GO:2000440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of toll-like receptor 15 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 15 signaling pathway","termid":"GO:0035681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 15 signaling pathway","synonyms":[{"name":"regulation of TLR15 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 15 signalling pathway","type":"exact"}],"termid":"GO:2000440"}


id: PATO:0000244
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000244 ocular reflex (obsolete PATO:0000244)","termid":"PATO:0000244"}


id: PBO:0056029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanosterol synthase","termid":"PBO:0056029"}


id: PBO:0065756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pygopus family PHD finger 1","termid":"PBO:0065756"}


id: GO:0034997
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that comprises one integrin alphav subunit, one integrin beta5 subunit, and vitronectin.","definition_xrefs":["PMID:1694173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alphav-beta5 integrin-vitronectin complex","synonyms":[{"name":"ITGAV-ITGB5-VTN complex","type":"narrow"}],"termid":"GO:0034997"}


id: PBO:0042884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 298","termid":"PBO:0042884"}


id: GO:1902396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a bicellular tight junction.","definition_xrefs":["GOC:TermGenie","PMID:18332111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to bicellular tight junction","synonyms":[{"name":"protein localisation in tight junction","type":"exact"},{"name":"protein localisation to tight junction","type":"exact"},{"name":"protein localization in tight junction","type":"exact"}],"termid":"GO:1902396"}


id: GO:0032892
data:
  {"annotated_genes":["SJAG_02605","SJAG_03591","SJAG_05346","SJAG_00991","SJAG_04920"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[89422,87840,94979,106636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[94980,87841,89423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[89424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"organic acid transport","termid":"GO:0015849"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_04920":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of organic acid transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of organic acid transport","type":"narrow"},{"name":"stimulation of organic acid transport","type":"narrow"},{"name":"up regulation of organic acid transport","type":"exact"},{"name":"up-regulation of organic acid transport","type":"exact"},{"name":"upregulation of organic acid transport","type":"exact"}],"termid":"GO:0032892","terms_by_termid":{"GO:0035432":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: FYPO:0005738
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of serine at position 10 of histone H3 not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone H3-S10 phosphorylation during vegetative growth","synonyms":[{"name":"abolished histone H3 phosphorylation at S10 during vegetative growth","type":"exact"},{"name":"abolished histone H3-S10 phosphorylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3S10 phosphorylation during vegetative growth","type":"exact"},{"name":"histone H3-S10 phosphorylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-S10 phosphorylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0005738"}


id: PATO:0000826
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000826 visual acuity value (obsolete PATO:0000826)","termid":"PATO:0000826"}


id: GO:0000991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, core RNA polymerase II binding (obsolete GO:0000991)","synonyms":[{"name":"core RNA polymerase II binding transcription factor activity","type":"exact"}],"termid":"GO:0000991"}


id: GO:0051978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of lysophospholipids from one side of a membrane to the other. A lysophospholipid is a phospholipid that lacks one of its fatty acyl chains; it is an intermediate formed during digestion of dietary and biliary phospholipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"lysophospholipid:sodium symporter activity","synonyms":[{"name":"lysophospholipid transporter activity","type":"broad"}],"termid":"GO:0051978"}


id: GO:0030413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A small peptide excreted by a naturally transformable bacterium (e.g. Bacillus subtilis) that transmits a signal required for the establishment of competence.","definition_xrefs":["GOC:mah","PMID:7698645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pheromone activity","termid":"GO:0005186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005186"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0098772","GO:0140677","GO:0005488","GO:0003674","GO:0005186"],"is_obsolete":false,"name":"competence pheromone activity","termid":"GO:0030413"}


id: PBO:0057261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 487a","termid":"PBO:0057261"}


id: PBO:0039408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 11","termid":"PBO:0039408"}


id: GO:0005821
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Structure between the central and outer plaques of the spindle pole body.","definition_xrefs":["PMID:9215630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005816","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"intermediate layer of spindle pole body","termid":"GO:0005821"}


id: FYPO:0003586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which replication fork processing is abnormal. Replication fork processing is process in which a DNA replication fork that has stalled (due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes) is repaired and replication is restarted.","definition_xrefs":["PomBase:mah","GO:0031297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal replication fork processing","synonyms":[{"name":"abnormal HR-mediated fork restart","type":"related"},{"name":"abnormal collapsed replication fork processing","type":"exact"},{"name":"abnormal recovery from replication fork arrest","type":"exact"},{"name":"abnormal recovery from replication fork stalling","type":"exact"},{"name":"abnormal replication fork processing during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork processing during vegetative growth","type":"exact"},{"name":"abnormal replication fork restart","type":"related"},{"name":"abnormal replication restart","type":"related"}],"termid":"FYPO:0003586"}


