# terms

id: PBO:0030547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_valine_import","termid":"PBO:0030547"}


id: GO:1900000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anthocyanin catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of anthocyanin metabolic process","termid":"GO:0031537"},{"relation_name":"regulates","term_name":"anthocyanin-containing compound catabolic process","termid":"GO:0046284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anthocyanin catabolic process","synonyms":[{"name":"regulation of anthocyanin breakdown","type":"exact"},{"name":"regulation of anthocyanin catabolism","type":"exact"},{"name":"regulation of anthocyanin degradation","type":"exact"}],"termid":"GO:1900000"}


id: PBO:0061630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 13","termid":"PBO:0061630"}


id: GO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Degradation of a mitochondrion by microautophagy.","definition_xrefs":["PMID:27003723","PMID:15798367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy of mitochondrion","termid":"GO:0000422"},{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044248","GO:0007005","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"micromitophagy","termid":"GO:0000424"}


id: PBO:0084011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen phosphorylase required for the mobilization of glycogen; non-essential; regulated by cyclic AMP-mediated phosphorylation; phosphorylation by Cdc28p may coordinately regulate carbohydrate metabolism and the cell cycle; expression is regulated by stress-response elements and by the HOG MAP kinase pathway","termid":"PBO:0084011"}


id: PR:O74397
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine synthetase domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase domain-containing protein C4F6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.11c","secondary_identifiers":["UniProtKB:O74397"],"synonyms":[{"name":"Spom972h-ASNSD1","type":"exact"}],"termid":"PR:O74397"}


id: GO:0102883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-beta-chamigrene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.78","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"(+)-beta-chamigrene synthase activity","secondary_identifiers":["MetaCyc:RXN-8424","RHEA:30379"],"termid":"GO:0102883"}


id: PBO:0056886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uptake 1","termid":"PBO:0056886"}


id: SO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recombination signal including V-heptamer, V-spacer and V-nonamer in 3' of V-region of a V-gene or V-sequence of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_signal_feature","termid":"SO:0000939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_gene_recombination_feature","synonyms":[{"name":"V gene recombination feature","type":"exact"},{"name":"V-RS","type":"exact"}],"termid":"SO:0000538"}


id: PBO:0041094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRWD1 antisense RNA 2","termid":"PBO:0041094"}


id: PBO:0052862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-5","termid":"PBO:0052862"}


id: PBO:0003563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-endonuclease Apn2","termid":"PBO:0003563"}


id: PBO:0002716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein, BUD22 family (predicted)","termid":"PBO:0002716"}


id: PBO:0089647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-F/3-ketosphinganine reductase fusion protein","termid":"PBO:0089647"}


id: PBO:0046372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 7","termid":"PBO:0046372"}


id: PBO:0086507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein kinase, potentially phosphorylated by Cdc28p; interacts with ribosome biogenesis factors, Cka2, Gus1 and Arc1; protein abundance increases in response to DNA replication stress","termid":"PBO:0086507"}


id: GO:0010391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucomannan, a polysaccharide composed of D-glucose and D-mannose. The mannose units form the backbone structure (a linear main chain) with the D-glucose as single side-units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substituted mannan metabolic process","termid":"GO:0006080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucomannan metabolic process","synonyms":[{"name":"glucomannan metabolism","type":"exact"}],"termid":"GO:0010391"}


id: GO:0060575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a columnar/cuboidal epithelial cell of the intestine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial cell differentiation","termid":"GO:0060575"}


id: GO:0035753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in sustaining the fidelity and copy number of DNA trinucleotide repeats. DNA trinucleotide repeats are naturally occurring runs of three base-pairs.","definition_xrefs":["SO:0000291","GOC:rb","PMID:21347277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of DNA repeat elements","termid":"GO:0043570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"maintenance of DNA trinucleotide repeats","termid":"GO:0035753"}


id: PBO:0029699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_septated_mononucleate_vegetative_cell","termid":"PBO:0029699"}


id: PBO:0061867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodendrocyte myelin glycoprotein","termid":"PBO:0061867"}


id: PBO:0086232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with glycerol 3-phosphatase; plays a role in anaerobic glycerol production; localizes to the nucleus and cytosol","termid":"PBO:0086232"}


id: GO:0002194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a hepatocyte during the development of the liver. Hepatocytes emerge from the hepatic epithelium, populating the septum transversum and lateral mesenchymal areas of the hepatic lobes.","definition_xrefs":["CL:0000182","PMID:9794819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte cell migration","termid":"GO:0002194"}


id: FYPO:0004809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of heterochromatin maintenance is shorter than normal in the context of chromatin silencing at centromere outer repeat regions.","definition_xrefs":["PMID:25543137","PomBase:mah","GO:0070829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat","synonyms":[{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere otr","type":"exact"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at pericentric region","type":"related"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at pericentromeric region","type":"related"},{"name":"reduced duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat","type":"exact"}],"termid":"FYPO:0004809"}


id: PBO:0068821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 59, pseudogene","termid":"PBO:0068821"}


id: FYPO:0006495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA-DNA hybrid molecules is greater than normal at tRNA genes.","definition_xrefs":["PomBase:mah","PMID:29622660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of R-loops","termid":"FYPO:0007901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased number of R-loops at tRNA genes","synonyms":[{"name":"increased RNA-DNA hybrid level at tRNA genes","type":"exact"},{"name":"increased level of DNA:RNA hybrids at tRNA genes","type":"exact"},{"name":"increased level of RNA-DNA hybrids at tDNA","type":"exact"},{"name":"increased level of RNA-DNA hybrids at tRNA genes","type":"exact"},{"name":"increased level of RNA-DNA hybrids at tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased level of RNA-DNA hybrids at tRNA genes during vegetative growth","type":"exact"}],"termid":"FYPO:0006495"}


id: GO:0002719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of cytokine production contributing to an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"negative regulation of production of molecular mediator of immune response","termid":"GO:0002701"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"negatively_regulates","term_name":"cytokine production involved in immune response","termid":"GO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytokine production involved in immune response","secondary_identifiers":["GO:0002743","GO:0002740"],"synonyms":[{"name":"down regulation of cytokine production during immune response","type":"related"},{"name":"down-regulation of cytokine production during immune response","type":"exact"},{"name":"downregulation of cytokine production during immune response","type":"related"},{"name":"inhibition of cytokine production during immune response","type":"related"},{"name":"negative regulation of cytokine biosynthetic process involved in immune response","type":"narrow"},{"name":"negative regulation of cytokine production during immune response","type":"related"},{"name":"negative regulation of cytokine secretion involved in immune response","type":"narrow"}],"termid":"GO:0002719"}


id: FYPO:0003020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the autophosphorylation of one or more specific proteins, or of specific protein sites, does not occur. Protein autophosphorylation is the phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["PomBase:mah","GO:0031952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"},{"relation_name":"is_a","term_name":"abnormal protein autophosphorylation during vegetative growth","termid":"FYPO:0003019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein autophosphorylation during vegetative growth","synonyms":[{"name":"abolished protein autophosphorylation during mitotic cell cycle","type":"related"},{"name":"protein autophosphorylation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003020"}


id: PBO:0001344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp5 (predicted)","termid":"PBO:0001344"}


id: PBO:0067365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 465, pseudogene","termid":"PBO:0067365"}


id: PBO:0065589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 5","termid":"PBO:0065589"}


id: GO:0004896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a cytokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"cytokine receptor activity","secondary_identifiers":["GO:0004907"],"synonyms":[{"name":"IL receptor","type":"narrow"},{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor activity","type":"related"},{"name":"interleukin receptor activity","type":"narrow"}],"termid":"GO:0004896"}


id: GO:0046802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an assembled viral particle out of the host cell nucleus by budding and fusion through the nuclear membranes. In this process, enveloped viral particles are formed by budding through the inner nuclear membrane. These perinuclear enveloped particles then fuse with the outer nuclear membrane to deliver a naked capsid into the host cytoplasm.","definition_xrefs":["PMID:22858153","PMID:21494278","PMID:9601512","VZ:1952","PMID:9765421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exit of virus from host cell nucleus","termid":"GO:0039674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit of virus from host cell nucleus by nuclear egress","secondary_identifiers":["GO:0039676"],"synonyms":[{"name":"capsid egress","type":"exact"},{"name":"egress of viral procapsid from host cell nucleus","type":"related"},{"name":"nuclear egress","type":"exact"},{"name":"nuclear egress of viral procapsid","type":"exact"}],"termid":"GO:0046802"}


id: PBO:0085136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for export of tRNAs from the nucleus; also copurifies with the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA","termid":"PBO:0085136"}


id: GO:0048241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of epinephrine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"catecholamine transport","termid":"GO:0051937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"epinephrine transport","synonyms":[{"name":"adrenaline transport","type":"exact"}],"termid":"GO:0048241"}


id: GO:0021808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process that results in the fluctuations in intracellular calcium that are responsible for the initiation of movement as a component of the process of cerebral cortex glial-mediated radial migration.","definition_xrefs":["GOC:cls","GOC:dgh","PMID:12626695","GOC:jid","GOC:dph","GO_REF:0000021"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic calcium signaling involved in initiation of cell movement in glial-mediated radial cell migration (obsolete GO:0021808)","synonyms":[{"name":"cytosolic calcium signalling involved in the initiation of cell movement in glial-mediated radial cell migration","type":"exact"}],"termid":"GO:0021808"}


id: PBO:0015246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 (predicted)","termid":"PBO:0015246"}


id: GO:0015603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an iron chelate from one side of a membrane to the other. An iron chelate is a heterocyclic compound having a metal ion attached by coordinate bonds to at least two nonmetal ions.","definition_xrefs":["PMID:17660286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"}


id: GO:0052203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of catalytic activity in other organism involved in symbiotic interaction (obsolete GO:0052203)","synonyms":[{"name":"modulation of enzyme activity within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052203"}


id: GO:0102583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-sambubioside + 4-coumaryl-CoA = cyanidin 3-O-[2''-O-xylosyl) 6''-O-(p-coumaroyl) glucoside + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside-(2''-O-xyloside) 6''-O-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15329"],"termid":"GO:0102583"}


id: PBO:0051922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 5","termid":"PBO:0051922"}


id: GO:0015433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptide antigen(in) + ATP = peptide antigen(out) + ADP + phosphate.","definition_xrefs":["TC:3.A.1.209.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type peptide transporter activity","termid":"GO:0015440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type peptide antigen transporter activity","secondary_identifiers":["EC:7.4.2.14","Reactome:R-HSA-983144","RHEA:65972","MetaCyc:3.6.3.43-RXN","Reactome:R-HSA-1236949"],"synonyms":[{"name":"ATP-dependent peptide antigen transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled peptide antigen transmembrane transporter activity","type":"related"},{"name":"major histocompatibility peptide transporter activity","type":"exact"},{"name":"peptide antigen ABC transporter","type":"narrow"},{"name":"peptide antigen transporter activity","type":"broad"},{"name":"peptide antigen-transporting ATPase activity","type":"exact"}],"termid":"GO:0015433"}


id: PBO:0060256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCN upstream transcript","termid":"PBO:0060256"}


id: PBO:0054013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1343","termid":"PBO:0054013"}


id: GO:0006923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic degradation of cytoskeletal proteins that contributes to apoptosis, leading to the collapse of cytoskeletal structures.","definition_xrefs":["ISBN:0815332181","GOC:mah","GOC:mtg_apoptosis","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage of cytoskeletal proteins involved in execution phase of apoptosis (obsolete GO:0006923)","synonyms":[{"name":"apoptotic cleavage of cytoskeletal proteins","type":"exact"},{"name":"cleavage of cytoskeletal proteins involved in apoptosis","type":"broad"},{"name":"cleavage of cytoskeletal proteins involved in execution phase of apoptosis","type":"exact"}],"termid":"GO:0006923"}


id: PBO:0050846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ICA1 antisense RNA 1","termid":"PBO:0050846"}


id: GO:0072631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-29 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:15546383","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type III interferon production","termid":"GO:0034343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-29 production","secondary_identifiers":["GO:0072632"],"synonyms":[{"name":"IL-29 production","type":"exact"},{"name":"IL29 production","type":"exact"},{"name":"interferon lambda 1 production","type":"exact"},{"name":"interleukin-29 secretion","type":"narrow"}],"termid":"GO:0072631"}


id: GO:1900916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of octadecene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"regulation of octadecene biosynthetic process","termid":"GO:1900914"},{"relation_name":"is_a","term_name":"positive regulation of octadecene metabolic process","termid":"GO:1900919"},{"relation_name":"positively_regulates","term_name":"octadecene biosynthetic process","termid":"GO:1900682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of octadecene biosynthetic process","synonyms":[{"name":"activation of 1-octadecene biosynthetic process","type":"related"},{"name":"activation of octadecene anabolism","type":"related"},{"name":"activation of octadecene biosynthesis","type":"related"},{"name":"activation of octadecene biosynthetic process","type":"narrow"},{"name":"activation of octadecene formation","type":"related"},{"name":"activation of octadecene synthesis","type":"related"},{"name":"positive regulation of 1-octadecene biosynthetic process","type":"related"},{"name":"positive regulation of octadecene anabolism","type":"related"},{"name":"positive regulation of octadecene biosynthesis","type":"related"},{"name":"positive regulation of octadecene formation","type":"related"},{"name":"positive regulation of octadecene synthesis","type":"related"},{"name":"up regulation of 1-octadecene biosynthetic process","type":"related"},{"name":"up regulation of octadecene anabolism","type":"related"},{"name":"up regulation of octadecene biosynthesis","type":"related"},{"name":"up regulation of octadecene biosynthetic process","type":"exact"},{"name":"up regulation of octadecene formation","type":"related"},{"name":"up regulation of octadecene synthesis","type":"related"},{"name":"up-regulation of 1-octadecene biosynthetic process","type":"related"},{"name":"up-regulation of octadecene anabolism","type":"related"},{"name":"up-regulation of octadecene biosynthesis","type":"related"},{"name":"up-regulation of octadecene biosynthetic process","type":"exact"},{"name":"up-regulation of octadecene formation","type":"related"},{"name":"up-regulation of octadecene synthesis","type":"related"},{"name":"upregulation of 1-octadecene biosynthetic process","type":"related"},{"name":"upregulation of octadecene anabolism","type":"related"},{"name":"upregulation of octadecene biosynthesis","type":"related"},{"name":"upregulation of octadecene biosynthetic process","type":"exact"},{"name":"upregulation of octadecene formation","type":"related"},{"name":"upregulation of octadecene synthesis","type":"related"}],"termid":"GO:1900916"}


id: PATO:0000154
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000154 pain threshold (obsolete PATO:0000154)","termid":"PATO:0000154"}


id: PATO:0000769
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coordination quality of inhering in a bearer by virtue of the bearer's having skillful and effective interaction of movement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coordination","termid":"PATO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coordinated","termid":"PATO:0000769"}


id: GO:0002071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for a glandular epithelial cell to attain its fully functional state. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell maturation","termid":"GO:0002069"},{"relation_name":"part_of","term_name":"glandular epithelial cell development","termid":"GO:0002068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glandular epithelial cell maturation","termid":"GO:0002071"}


id: PBO:0061833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 1 pseudogene 1","termid":"PBO:0061833"}


id: GO:0014053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid secretion","termid":"GO:0014052"},{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid secretion","synonyms":[{"name":"down regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid secretion","type":"narrow"},{"name":"negative regulation of GABA secretion","type":"exact"}],"termid":"GO:0014053"}


id: PBO:0002788
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.1.5","termid":"PBO:0002788"}


id: PR:Q10242
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gluconokinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00941","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconokinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.12","secondary_identifiers":["UniProtKB:Q10242"],"synonyms":[{"name":"Spom972h-IDNK","type":"exact"},{"name":"gluconate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10242"}


id: GO:0018548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pentaerythritol trinitrate + NADPH = NADP+ + nitrate + pentaerythritol dinitrate.","definition_xrefs":["PMID:31119061","PMID:29168057"],"gene_count":0,"genotype_count":0,"name":"obsolete pentaerythritol trinitrate reductase activity (obsolete GO:0018548)","termid":"GO:0018548"}


id: PBO:0075005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-16","termid":"PBO:0075005"}


id: PBO:0086707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; member of the multi-drug and toxin extrusion (MATE) family of the multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) exporter superfamily","termid":"PBO:0086707"}


id: FYPO:0000289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype that affects the regulation of translation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype","termid":"FYPO:0000288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"translation regulation phenotype","synonyms":[{"name":"fission yeast translation regulation phenotype","type":"exact"}],"termid":"FYPO:0000289"}


id: GO:0072191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of smooth muscle in the ureter over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle tissue development","termid":"GO:0048745"},{"relation_name":"part_of","term_name":"ureter development","termid":"GO:0072189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter smooth muscle development","termid":"GO:0072191"}


id: PR:O59703
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyl pyrophosphate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.06c","synonyms":[{"name":"(2E,6E)-farnesyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Dimethylallyltranstransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Farnesyltranstransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GGPP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GGPPSase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Geranyltranstransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spo9","type":"exact"},{"name":"farnesyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"geranylgeranyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sporulation-specific protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59703"}


id: PBO:0087904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; targets include ATP-binding cassette (ABC) transporters, major facilitator superfamily transporters, and other genes involved in the pleiotropic drug resistance (PDR) phenomenon; PDR8 has a paralog, YRR1, that arose from the whole genome duplication","termid":"PBO:0087904"}


id: PBO:0064745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 81","termid":"PBO:0064745"}


id: FYPO:0007239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the old growing cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:31719163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to growing cell tip","termid":"FYPO:0003316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to old growing cell tip","synonyms":[{"name":"normal protein localisation to old growing cell tip","type":"exact"},{"name":"normal protein localization to old growing cell end","type":"exact"},{"name":"normal protein localization to old growing cell tip during mitotic cell cycle","type":"related"},{"name":"normal protein localization to old growing cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0007239"}


id: PBO:0056505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K12 binding inhibitory protein 1","termid":"PBO:0056505"}


id: PBO:0050879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI1 pseudogene 2","termid":"PBO:0050879"}


id: PBO:0043033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 4B pseudogene 1","termid":"PBO:0043033"}


id: GO:0032374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"regulates","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of cholesterol transport","termid":"GO:0032374"}


id: PBO:0047103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 153 member B","termid":"PBO:0047103"}


id: PBO:0076979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine hydroxylase","termid":"PBO:0076979"}


id: GO:1903353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nucleus organization.","definition_xrefs":["GO_REF:0000058","PMID:16943282","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"nucleus organization","termid":"GO:0006997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nucleus organization","synonyms":[{"name":"regulation of nuclear morphology","type":"related"},{"name":"regulation of nuclear organisation","type":"exact"},{"name":"regulation of nuclear organization","type":"exact"},{"name":"regulation of nuclear organization and biogenesis","type":"related"},{"name":"regulation of nucleus organization and biogenesis","type":"related"}],"termid":"GO:1903353"}


id: PBO:0066749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 47","termid":"PBO:0066749"}


id: FYPO:0002687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which telomere length is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere morphology during vegetative growth","termid":"FYPO:0006513"},{"relation_name":"is_a","term_name":"normal telomere length","termid":"FYPO:0006515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere length during vegetative growth","synonyms":[{"name":"normal telomere length during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002687"}


id: MOD:01943
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two adjacent residues by formation of a pyrrolidione ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrrolidione ring crosslinked residues","termid":"MOD:01943"}


id: GO:0007344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The merging of two pronuclei in a fertilized egg to fuse and produce a single zygotic genome.","definition_xrefs":["ISBN:087969307X","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyogamy","termid":"GO:0000741"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronuclear fusion","termid":"GO:0007344"}


id: PBO:0055035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2450","termid":"PBO:0055035"}


id: FYPO:0000342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular respiration is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular respiration","synonyms":[{"name":"decreased cellular respiration during mitotic cell cycle","type":"related"},{"name":"decreased cellular respiration during vegetative growth","type":"exact"},{"name":"decreased respiration","type":"broad"},{"name":"decreased respiratory metabolism","type":"exact"},{"name":"reduced cellular respiration","type":"exact"},{"name":"respiratory metabolism: decreased","type":"related"}],"termid":"FYPO:0000342"}


id: GO:0009116
data:
  {"annotated_genes":["SJAG_00044","SJAG_01070","SJAG_03771","SJAG_04693","SJAG_00957","SJAG_01359","SJAG_04264","SJAG_02179","SJAG_00694","SJAG_00134","SJAG_03881","SJAG_01859","SJAG_01781","SJAG_05029","SJAG_06634","SJAG_02959","SJAG_02582","SJAG_02580","SJAG_04927","SJAG_03213","SJAG_03096","SJAG_01673","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[83718,83717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[86657,109805,109806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046085"},{"annotations":[112932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[104473,85316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[104597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[104598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[109195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[104599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[94691,94690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043174"},{"annotations":[86767,108270,87177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[103357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042278"},{"annotations":[85900,111929,89637,89859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[86768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[103359,101582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006213"},{"annotations":[109919,93849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[108012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_00885":null,"SJAG_00957":null,"SJAG_01070":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null,"SJAG_03096":null,"SJAG_03213":null,"SJAG_03771":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_04693":null,"SJAG_04927":null,"SJAG_05029":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside metabolism","type":"exact"}],"termid":"GO:0009116","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0006213":null,"GO:0009972":null,"GO:0042278":null,"GO:0043097":null,"GO:0043174":null,"GO:0046085":null,"GO:0046086":null,"GO:0046132":null,"GO:0046135":null,"GO:0046495":null,"GO:0071590":null,"GO:0071592":null}}


id: PBO:0036403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein modifier, ubiquitin","termid":"PBO:0036403"}


id: GO:1904712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Wnt-Frizzled-LRP5/6 complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of Wnt-Frizzled-LRP5/6 complex assembly","termid":"GO:1904711"},{"relation_name":"positively_regulates","term_name":"Wnt-Frizzled-LRP5/6 complex assembly","termid":"GO:1904701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of Wnt-Frizzled-LRP5/6 complex assembly","synonyms":[{"name":"activation of Frizzled-LRP5/6 complex assembly","type":"narrow"},{"name":"activation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"activation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"activation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"activation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"activation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"activation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"narrow"},{"name":"activation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"narrow"},{"name":"activation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"activation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"positive regulation of Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"positive regulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"positive regulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"positive regulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"positive regulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"positive regulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"positive regulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"positive regulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"positive regulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"positive regulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"up regulation of Frizzled-LRP5/6 complex assembly","type":"exact"},{"name":"up regulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"up regulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"up regulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"up regulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"up regulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"up regulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"up regulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"up regulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"up regulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"up-regulation of Frizzled-LRP5/6 complex assembly","type":"exact"},{"name":"up-regulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"up-regulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"up-regulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"up-regulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"up-regulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"up-regulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"up-regulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"up-regulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"up-regulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"upregulation of Frizzled-LRP5/6 complex assembly","type":"exact"},{"name":"upregulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"upregulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"upregulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"upregulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"upregulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"upregulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"upregulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"upregulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"upregulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"}],"termid":"GO:1904712"}


id: PBO:0003567
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unsupported by transcription data","termid":"PBO:0003567"}


id: GO:1900239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phenotypic switching.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phenotypic switching","synonyms":[{"name":"regulation of phenotypic dimorphism","type":"related"}],"termid":"GO:1900239"}


id: FYPO:0005909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an RNA molecule is abnormal during a cellular response to endoplasmic reticulum stress.","definition_xrefs":["PMID:23066505","PomBase:mah","GO:0031123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"abnormal RNA 3'-end processing during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"abnormal RNA 3'-end processing during cellular response to ER stress","type":"exact"},{"name":"abnormal RNA 3'-end processing during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"abnormal RNA 3'-end processing during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"}],"termid":"FYPO:0005909"}


id: PBO:0053912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1206","termid":"PBO:0053912"}


id: PBO:0056567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucolipin TRP cation channel 2","termid":"PBO:0056567"}


id: PBO:0083431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YGR294W","termid":"PBO:0083431"}


id: PBO:0086197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; detected in highly purified mitochondria in high-throughput studies; predicted to be involved in ribosome biogenesis","termid":"PBO:0086197"}


id: PR:O74776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial ribosome-associated GTPase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome-associated GTPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.04c","secondary_identifiers":["UniProtKB:O74776"],"synonyms":[{"name":"SPBC25B2.04c","type":"related"},{"name":"Spom972h-MTG1","type":"exact"}],"termid":"PR:O74776"}


id: GO:2000651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transport","termid":"GO:1902307"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of sodium ion transmembrane transporter activity","synonyms":[{"name":"positive regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000651"}


id: PBO:0078247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 24/OR9-2 (pseudogene)","termid":"PBO:0078247"}


id: PBO:0040373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit d pseudogene 1","termid":"PBO:0040373"}


id: PBO:0067724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 22","termid":"PBO:0067724"}


id: PBO:0068271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 8","termid":"PBO:0068271"}


id: GO:0043114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which blood vessels can be pervaded by fluid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular permeability","termid":"GO:0043114"}


id: PBO:0055701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLPH divergent transcript","termid":"PBO:0055701"}


id: PBO:0054927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2341","termid":"PBO:0054927"}


id: GO:1905463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA duplex unwinding.","definition_xrefs":["PMID:26503245","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA duplex unwinding","termid":"GO:1905462"},{"relation_name":"is_a","term_name":"negative regulation of chromosome organization","termid":"GO:2001251"},{"relation_name":"negatively_regulates","term_name":"DNA duplex unwinding","termid":"GO:0032508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA duplex unwinding","synonyms":[{"name":"down regulation of DNA duplex unwinding","type":"exact"},{"name":"down regulation of DNA unwinding","type":"exact"},{"name":"down regulation of duplex DNA melting","type":"exact"},{"name":"down-regulation of DNA duplex unwinding","type":"exact"},{"name":"down-regulation of DNA unwinding","type":"exact"},{"name":"down-regulation of duplex DNA melting","type":"exact"},{"name":"downregulation of DNA duplex unwinding","type":"exact"},{"name":"downregulation of DNA unwinding","type":"exact"},{"name":"downregulation of duplex DNA melting","type":"exact"},{"name":"inhibition of DNA duplex unwinding","type":"narrow"},{"name":"inhibition of DNA unwinding","type":"narrow"},{"name":"inhibition of duplex DNA melting","type":"narrow"},{"name":"negative regulation of DNA unwinding","type":"exact"},{"name":"negative regulation of duplex DNA melting","type":"exact"}],"termid":"GO:1905463"}


id: PBO:0029237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_disassembly","termid":"PBO:0029237"}


id: FYPO:0000286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype observed in the vegetative growth phase of the life cycle in which a population of cells grow poorly in medium that has a low concentration of manganese (Mn2+).","definition_xrefs":["PMID:14723709","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell population growth","termid":"FYPO:0001356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to manganese depletion","synonyms":[{"name":"hypersensitive to manganese depletion","type":"exact"},{"name":"sensitive to manganese depletion during mitotic cell cycle","type":"related"},{"name":"sensitive to manganese depletion during vegetative growth","type":"exact"}],"termid":"FYPO:0000286"}


id: PBO:0031190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delaminated_cell_wall_during_vegetative_growth","termid":"PBO:0031190"}


id: PBO:0081966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZPR1 pseudogene 1","termid":"PBO:0081966"}


id: GO:1990891
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112775],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905824"}]},"cv_name":"biological_process","definition":"The cell cycle process in which sister chromatid arms are physically detached from each other during mitosis.","definition_xrefs":["PMID:21633354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid separation","termid":"GO:0051306"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"mitotic sister chromatid arm separation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990891","terms_by_termid":{"GO:1905824":null}}


id: PBO:0004939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase Spi1","termid":"PBO:0004939"}


id: GO:0047380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a medium-chain acyl-CoA = a medium-chain carboxylate + CoA. Requires ADP.","definition_xrefs":["MetaCyc:3.1.2.19-RXN","EC:3.1.2.19"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP-dependent medium-chain-acyl-CoA hydrolase activity (obsolete GO:0047380)","synonyms":[{"name":"ADP-dependent medium-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain acyl-CoA hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain acyl-thioester hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain hydrolase activity","type":"related"},{"name":"ADP-dependent myristoyl-CoA thioesterase activity","type":"narrow"},{"name":"ADP-dependent-medium-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0047380"}


id: GO:0004631
data:
  {"annotated_genes":["SJAG_01474"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92703],"is_not":false,"summary":null,"term":"GO:0004631"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-5-phosphomevalonate + ATP = (R)-5-diphosphomevalonate + ADP + H+.","definition_xrefs":["EC:2.7.4.2","RHEA:16341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01474":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"phosphomevalonate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03245","MetaCyc:PHOSPHOMEVALONATE-KINASE-RXN","Reactome:R-HSA-191422"],"synonyms":[{"name":"5-phosphomevalonate kinase activity","type":"related"},{"name":"ATP:(R)-5-phosphomevalonate phosphotransferase activity","type":"related"},{"name":"ATP:5-phosphomevalonate phosphotransferase activity","type":"related"},{"name":"mevalonate phosphate kinase activity","type":"related"},{"name":"mevalonate-5-phosphate kinase activity","type":"related"},{"name":"mevalonic acid phosphate kinase activity","type":"related"}],"termid":"GO:0004631","terms_by_termid":{"GO:0004631":null}}


id: GO:0008829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dCTP + H2O = dUTP + NH3.","definition_xrefs":["EC:3.5.4.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"dCTP deaminase activity","secondary_identifiers":["Reactome:R-HSA-180632","MetaCyc:DCTP-DEAM-RXN","RHEA:22680"],"synonyms":[{"name":"5-methyl-dCTP deaminase activity","type":"related"},{"name":"dCTP aminohydrolase activity","type":"related"},{"name":"deoxycytidine triphosphate deaminase activity","type":"related"}],"termid":"GO:0008829"}


id: GO:0050020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinonate = 2-dehydro-3-deoxy-L-arabinonate + H2O.","definition_xrefs":["EC:4.2.1.25","RHEA:20968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-arabinonate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R02522","MetaCyc:L-ARABINONATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"L-arabinonate hydro-lyase (2-dehydro-3-deoxy-L-arabinonate-forming)","type":"related"},{"name":"L-arabinonate hydro-lyase activity","type":"related"},{"name":"L-arabonate dehydrase activity","type":"related"},{"name":"L-arabonate dehydratase activity","type":"related"}],"termid":"GO:0050020"}


id: PBO:0062213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AK member 4 pseudogene","termid":"PBO:0062213"}


id: GO:0034752
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An aryl hydrocarbon receptor complex found in the cytosol, in which the ligand-binding subunit AhR is not bound to ligand; consists of AhR, two molecules of HSP90, the protein kinase c-Src, and the immunophilin XAP2/AIP.","definition_xrefs":["PMID:8937476","PMID:7598497","PMID:9447995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aryl hydrocarbon receptor complex","termid":"GO:0034751"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytosolic aryl hydrocarbon receptor complex","synonyms":[{"name":"9S-cytosolic aryl hydrocarbon (Ah) receptor non-ligand activated complex","type":"related"},{"name":"cytosolic AHRC","type":"exact"},{"name":"cytosolic AhR complex","type":"exact"}],"termid":"GO:0034752"}


id: GO:0018911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,2,4-trichlorobenzene, a derivative of benzene with chlorine atoms attached to positions 1, 2 and 4 of the ring. It is a colorless liquid used as a solvent in chemical manufacturing, in dyes and intermediates, dielectric fluid, synthetic transformer oils, lubricants, heat-transfer medium and insecticides.","definition_xrefs":["PMID:1987135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,2,4-trichlorobenzene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:tbz"],"synonyms":[{"name":"1,2,4-trichlorobenzene metabolic process","type":"broad"},{"name":"1,2,4-trichlorobenzene metabolism","type":"broad"}],"termid":"GO:0018911"}


id: GO:0004793
data:
  {"annotated_genes":["SJAG_02450"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008732"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine = glycine + acetaldehyde.","definition_xrefs":["EC:4.1.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02450":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"threonine aldolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:19625","MetaCyc:THREONINE-ALDOLASE-RXN"],"synonyms":[{"name":"L-threonine acetaldehyde-lyase (glycine-forming)","type":"related"},{"name":"L-threonine acetaldehyde-lyase activity","type":"related"},{"name":"L-threonine aldolase activity","type":"exact"}],"termid":"GO:0004793","terms_by_termid":{"GO:0008732":null}}


id: PBO:0003551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein But2","termid":"PBO:0003551"}


id: PBO:0076873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 22","termid":"PBO:0076873"}


id: GO:0072731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a papulacandin B stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to papulacandin B","termid":"GO:0072730"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to papulacandin B","termid":"GO:0072731"}


id: GO:0043110
data:
  {"annotated_genes":["SJAG_00247","SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98386,111116],"is_not":false,"summary":null,"term":"GO:0043110"},{"annotations":[98387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"}]},"cv_name":"molecular_function","definition":"Binding to replication fork barriers found in rDNA spacers, sites that inhibit replication forks in the direction opposite to rDNA transcription.","definition_xrefs":["GOC:jl","PMID:14645529","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rDNA binding","termid":"GO:0000182"},{"relation_name":"is_a","term_name":"replication fork barrier binding","termid":"GO:0031634"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"rDNA spacer replication fork barrier binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RFB binding","type":"exact"}],"termid":"GO:0043110","terms_by_termid":{"GO:0043110":null,"GO:0110035":null}}


id: GO:0035160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that tracheal tubes in an open tracheal system maintain their epithelial structure during the cell shape changes and movements that occur during the branching process.","definition_xrefs":["PMID:10694415","GOC:mtg_sensu","PMID:14681183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial structure maintenance","termid":"GO:0010669"},{"relation_name":"is_a","term_name":"regulation of tube architecture, open tracheal system","termid":"GO:0035152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of epithelial integrity, open tracheal system","synonyms":[{"name":"maintenance of tracheal epithelial integrity","type":"exact"}],"termid":"GO:0035160"}


id: PBO:0047481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 8","termid":"PBO:0047481"}


id: GO:0055058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the physical partitioning and separation of a neuroblast into two equi-potent daughter cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast division","termid":"GO:0055057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symmetric neuroblast division","termid":"GO:0055058"}


id: GO:0031279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cyclase activity","termid":"GO:0031279"}


id: GO:1905442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chondroitin 4'-sulfate stimulus.","definition_xrefs":["GOC:TermGenie","PMID:22365850","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to chondroitin 4'-sulfate","termid":"GO:1905441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chondroitin 4'-sulfate","termid":"GO:1905442"}


id: GO:0010297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heteropolysaccharide, a glycan composed of more than one type of monosaccharide residue.","definition_xrefs":["PMID:16640603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"heteropolysaccharide binding","synonyms":[{"name":"heteroglycan binding","type":"exact"}],"termid":"GO:0010297"}


id: PBO:0057259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 486-1","termid":"PBO:0057259"}


id: GO:1903518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single strand break repair.","definition_xrefs":["GO_REF:0000058","PMID:17395247","GOC:rl","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"positively_regulates","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of single strand break repair","synonyms":[{"name":"activation of single strand break repair","type":"narrow"},{"name":"up regulation of single strand break repair","type":"exact"},{"name":"up-regulation of single strand break repair","type":"exact"},{"name":"upregulation of single strand break repair","type":"exact"}],"termid":"GO:1903518"}


id: GO:0032971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle filament sliding.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle contraction","termid":"GO:0006937"},{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of actin filament-based movement","termid":"GO:1903115"},{"relation_name":"regulates","term_name":"muscle filament sliding","termid":"GO:0030049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of muscle filament sliding","termid":"GO:0032971"}


id: GO:0032229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic transmission, GABAergic","termid":"GO:0032228"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"negatively_regulates","term_name":"synaptic transmission, GABAergic","termid":"GO:0051932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of synaptic transmission, GABAergic","synonyms":[{"name":"down regulation of synaptic transmission, GABAergic","type":"exact"},{"name":"down-regulation of synaptic transmission, GABAergic","type":"exact"},{"name":"downregulation of synaptic transmission, GABAergic","type":"exact"},{"name":"inhibition of synaptic transmission, GABAergic","type":"narrow"}],"termid":"GO:0032229"}


id: FYPO:0005737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which prospore membrane formation begins later than normal.","definition_xrefs":["PomBase:mah","PMID:27630265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000121","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of prospore membrane formation","synonyms":[{"name":"delayed onset of ascospore-type prospore membrane assembly","type":"exact"},{"name":"delayed onset of forespore membrane formation","type":"exact"},{"name":"delayed prospore membrane formation","type":"exact"}],"termid":"FYPO:0005737"}


id: PBO:0069401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 661, pseudogene","termid":"PBO:0069401"}


id: PBO:0036089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_following_cellular_response_to_UV","termid":"PBO:0036089"}


id: GO:0075228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of encysted zoospore germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of encysted zoospore germination","termid":"GO:0075227"},{"relation_name":"is_a","term_name":"positive regulation of spore germination","termid":"GO:1904361"},{"relation_name":"positively_regulates","term_name":"encysted zoospore germination","termid":"GO:0075226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of encysted zoospore germination","synonyms":[{"name":"positive regulation of encysted zoospore germination on or near host","type":"exact"}],"termid":"GO:0075228"}


id: GO:0072175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an epithelial tube.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube formation","termid":"GO:0035148"},{"relation_name":"part_of","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial tube formation","termid":"GO:0072175"}


id: PBO:0080148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAV3 antisense RNA 1","termid":"PBO:0080148"}


id: GO:0008164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete organophosphorus resistance (obsolete GO:0008164)","synonyms":[{"name":"organophosphorus resistance","type":"exact"}],"termid":"GO:0008164"}


id: GO:0046437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-amino acids, the D-enantiomers of amino acids.","definition_xrefs":["GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"D-amino acid biosynthetic process","synonyms":[{"name":"D-amino acid anabolism","type":"exact"},{"name":"D-amino acid biosynthesis","type":"exact"},{"name":"D-amino acid formation","type":"exact"},{"name":"D-amino acid synthesis","type":"exact"}],"termid":"GO:0046437"}


id: PR:Q9UTQ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arp9 gene.","definition_xrefs":["UniProtKB:Q9UTQ7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit arp9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.06","synonyms":[{"name":"Spom972h-arp9","type":"exact"},{"name":"actin-like protein arp9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"actin-related protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"chromatin structure-remodeling complex subunit arp9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTQ7"}


id: PBO:0027642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_of_pheromone_response_gene_mRNA_during_vegetative_growth","termid":"PBO:0027642"}


id: PBO:0047772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box B1","termid":"PBO:0047772"}


id: SO:0001613
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant with in the CDS that causes out of frame elongation of the resulting polypeptide sequence at the C terminus.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated_polypeptide_C_terminal","termid":"SO:0001610"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_out_of_frame_polypeptide_C_terminal","synonyms":[{"name":"elongated polypeptide out of frame C terminal","type":"exact"}],"termid":"SO:0001613"}


id: FYPO:0005132
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to an enzymes that degrades cell wall polysaccharides.","definition_xrefs":["PMID:24623719","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spores sensitive to cell wall-degrading enzymes","synonyms":[{"name":"spores sensitive to glusulase","type":"narrow"}],"termid":"FYPO:0005132"}


id: PBO:0036032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abnormal_mitotic_chromosome_segregation_during_cellular_response_to_hydroxyurea","termid":"PBO:0036032"}


id: GO:0140474
data:
  {"annotated_genes":["SJAG_01305","SJAG_03710","SJAG_03416","SJAG_04370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87017,101932,103623,103752],"is_not":false,"summary":null,"term":"GO:0140474"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a mitochondrion and an ER membrane either via membrane lipid binding or by interacting with a mitochondrial outer membrane protein, to establish or maintain the localization of the mitochondrion.","definition_xrefs":["PMID:19556461","PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum-organelle membrane tether activity","termid":"GO:0170009"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01305":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"mitochondrion-endoplasmic reticulum membrane tether activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-mitochondrion membrane adaptor activity","type":"exact"},{"name":"ER-mitochondrion membrane tether activity","type":"exact"},{"name":"endoplasmic reticulum-mitochondrion membrane adaptor activity","type":"exact"},{"name":"endoplasmic reticulum-mitochondrion membrane tether activity","type":"exact"},{"name":"mitochondrion-ER membrane adaptor activity","type":"exact"},{"name":"mitochondrion-ER membrane tether activity","type":"exact"},{"name":"mitochondrion-endoplasmic reticulum membrane adaptor activity","type":"exact"}],"termid":"GO:0140474","terms_by_termid":{"GO:0140474":null}}


id: GO:0047053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-scoulerine + [reduced NADPH--hemoprotein reductase] + O2 = (S)-cheilanthifoline + [oxidized NADPH--hemoprotein reductase] + 2 H2O.","definition_xrefs":["RHEA:20485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-cheilanthifoline synthase activity","secondary_identifiers":["EC:1.14.19.65","MetaCyc:1.14.21.2-RXN","KEGG_REACTION:R03834"],"synonyms":[{"name":"(S)-scoulerine oxidase (methylenedioxy-bridge-forming) activity","type":"exact"}],"termid":"GO:0047053"}


id: GO:0009360
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The DNA polymerase III holoenzyme is a complex that contains 10 different types of subunits. These subunits are organized into 3 functionally essential sub-assemblies: the pol III core, the beta sliding clamp processivity factor and the clamp-loading complex. The pol III core carries out the polymerase and the 3'-5' exonuclease proofreading activities. The polymerase is tethered to the template via the sliding clamp processivity factor. The clamp-loading complex assembles the beta processivity factor onto the primer template and plays a central role in the organization and communication at the replication fork.","definition_xrefs":["PMID:12940977","UniProt:P06710","PMID:11525729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase complex","termid":"GO:0042575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA polymerase III complex","synonyms":[{"name":"DNA polymerase III holoenzyme complex","type":"exact"}],"termid":"GO:0009360"}


id: PBO:0003744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VII Cox7 (predicted)","termid":"PBO:0003744"}


id: GO:0032687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-alpha production.","definition_xrefs":["GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of type I interferon production","termid":"GO:0032480"},{"relation_name":"is_a","term_name":"regulation of interferon-alpha production","termid":"GO:0032647"},{"relation_name":"negatively_regulates","term_name":"interferon-alpha production","termid":"GO:0032607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interferon-alpha production","secondary_identifiers":["GO:0045355","GO:1902740"],"synonyms":[{"name":"down regulation of interferon-alpha production","type":"exact"},{"name":"down-regulation of interferon-alpha production","type":"exact"},{"name":"downregulation of interferon-alpha production","type":"exact"},{"name":"inhibition of interferon-alpha production","type":"narrow"},{"name":"negative regulation of interferon-alpha biosynthetic process","type":"narrow"},{"name":"negative regulation of interferon-alpha secretion","type":"narrow"}],"termid":"GO:0032687"}


id: FYPO:0002058
data:
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type"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sdh3delta":{"display_name":"sdh3delta","display_uniquename":"sdh3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03920:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03575","SJAG_01946","SJAG_03689","SJAG_02668","SJAG_02621","SJAG_03198","SJAG_03118"],"name":"viable cell population","references_by_uniquename":{"PMID:23090706":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_00364","SJAG_00514","SJAG_04697","SJAG_00409","SJAG_02763","SJAG_01794","SJAG_01242","SJAG_02527","SJAG_03449","SJAG_01946","SJAG_04703","SJAG_00601","SJAG_03920","SJAG_00429","SJAG_03453","SJAG_01355","SJAG_01753","SJAG_00266","SJAG_03198","SJAG_05207","SJAG_02592","SJAG_03720","SJAG_04464","SJAG_04843","SJAG_00426","SJAG_03892"],"single_locus_genotype_uniquenames":["oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","scd2delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta","mdh1delta","atf1delta","vps32delta","rad26delta","scd1delta","for3delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","ras1delta","ned1delta","oar2delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","rip1delta","tel1delta","cmp7delta","rad3delta","sty1delta","gpd1delta","cox6delta","fum1delta","gms1delta","sdh3delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","cem1delta"],"termid":"FYPO:0002058","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000103":null,"FYECO:0000117":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000080":null,"FYPO:0000082":null,"FYPO:0000674":null,"FYPO:0001234":null,"FYPO:0001355":null,"FYPO:0001357":null,"FYPO:0001408":null,"FYPO:0001690":null,"FYPO:0002058":null,"FYPO:0004481":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PR:000027556
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 phosphorylated form in which the phosphorylation occurs at the Ser or Thr residue within the LLPKx[ST] motif by the mitotic checkpoint serine/threonine-protein kinase BUB1. Example: UniProtKB:P04910, Ser-122, MOD:00046.","definition_xrefs":["PMID:19965387","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A.2 phosphorylated form","termid":"PR:000027552"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.2 phosphorylated 2","synonyms":[{"name":"HTA2/Phos:2","type":"exact"}],"termid":"PR:000027556"}


id: GO:0016737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which reduced flavodoxin acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.19.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on reduced flavodoxin as donor","termid":"GO:0016737"}


id: GO:0002563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor genes are diversified through alternate splicing.","definition_xrefs":["GOC:add","PMID:16166509","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immune receptors via alternate splicing","termid":"GO:0002563"}


id: GO:0043755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-ribazole 5'-phosphate + H2O = alpha-ribazole + phosphate.","definition_xrefs":["RHEA:24456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"alpha-ribazole phosphatase activity","secondary_identifiers":["KEGG_REACTION:R04594","EC:3.1.3.73","GO:0019175","MetaCyc:RXN-16788"],"synonyms":[{"name":"CobC","type":"related"},{"name":"alpha-ribazole-5'-P phosphatase activity","type":"exact"},{"name":"alpha-ribazole-5'-phosphate phosphohydrolase activity","type":"exact"}],"termid":"GO:0043755"}


id: GO:0031666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling in response to detection of lipopolysaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of lipopolysaccharide-mediated signaling pathway","termid":"GO:0031664"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"positively_regulates","term_name":"lipopolysaccharide-mediated signaling pathway","termid":"GO:0031663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"activation of lipopolysaccharide-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of LPS-mediated signaling pathway","type":"exact"},{"name":"positive regulation of lipopolysaccharide-mediated signalling pathway","type":"exact"},{"name":"stimulation of lipopolysaccharide-mediated signaling pathway","type":"narrow"},{"name":"up regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"up-regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"upregulation of lipopolysaccharide-mediated signaling pathway","type":"exact"}],"termid":"GO:0031666"}


id: PBO:0113014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy receptor; highly enriched in autophagic body fractions of both rapamycin-treated and nitrogen-starved cells; binds directly to forming isolation membranes during bulk autophagy; small protein of 144 amino acid residues without any identifiable membrane-spanning regions; N-terminal 42 amino acid region contains an amphipathic helix and an Atg8-family interacting motif","termid":"PBO:0113014"}


id: GO:0018032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Addition of an amide group from a glycine to a protein amino acid.","definition_xrefs":["UniProtKB-KW:KW-0027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein amidation","synonyms":[{"name":"protein amino acid amidation","type":"exact"}],"termid":"GO:0018032"}


id: GO:0103015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (Kdo)2-lipid A + 2 4-amino-4-deoxy-alpha-L-arabinopyranosyl di-trans,poly-cis-undecaprenyl phosphate = (beta-L-Ara4N)2-(KDO)2-lipid A + 2 ditrans,polycis-undecaprenyl phosphate.","definition_xrefs":["GOC:pz","EC:2.4.2.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-amino-4-deoxy-L-arabinose transferase activity","secondary_identifiers":["RHEA:35371","MetaCyc:RXN0-2001"],"termid":"GO:0103015"}


id: GO:0015994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"chlorophyll metabolic process","synonyms":[{"name":"chlorophyll metabolism","type":"exact"}],"termid":"GO:0015994"}


id: PBO:0063554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternally expressed 10","termid":"PBO:0063554"}


id: PBO:0113190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysolipid acyltransferase; involved in the synthesis of phosphatidic acid from 1-acyl-2-hydroxy-sn-glycero-3-phosphate using oleoyl-CoA as acyl donor and in phospholipid remodeling, incorporating palmitic acid into the sn-1 position of phosphatidylserine and phosphatidylethanolamine; localizes to ER membranes associated with mitochondria (MAMs); contains three predicted transmembrane domains; similar to C. elegans F55A11.5 and maize 1-acyl-glycerol-3-phosphate acyltransferase","termid":"PBO:0113190"}


id: PBO:0002027
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of the Ras1-Byr2 signalling pathway, acting downstream of Ras1","termid":"PBO:0002027"}


id: GO:1900589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of violaceol I.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"violaceol I metabolic process","termid":"GO:1900588"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"violaceol I catabolic process","synonyms":[{"name":"violaceol I breakdown","type":"exact"},{"name":"violaceol I catabolism","type":"exact"},{"name":"violaceol I degradation","type":"exact"}],"termid":"GO:1900589"}


id: PBO:0046724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecotropic viral integration site 2B","termid":"PBO:0046724"}


id: PBO:0043583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XV alpha 1 chain","termid":"PBO:0043583"}


id: PBO:0074036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A21 antisense RNA 1","termid":"PBO:0074036"}


id: PBO:0067951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 253","termid":"PBO:0067951"}


id: PBO:0052688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 12","termid":"PBO:0052688"}


id: PBO:0090907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator Bag101","termid":"PBO:0090907"}


id: PBO:0075369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 7","termid":"PBO:0075369"}


id: PBO:0033752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sister_chromatid_meiotic_recombination","termid":"PBO:0033752"}


id: GO:1903121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902041"},{"relation_name":"regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903121"}


id: PBO:0081868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 807, pseudogene","termid":"PBO:0081868"}


id: GO:1904961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the quiescent center. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GO_REF:0000084","GOC:TermGenie","PMID:21233333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quiescent center organization","synonyms":[{"name":"quiescent center structural organization","type":"exact"}],"termid":"GO:1904961"}


id: PBO:0070371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 9","termid":"PBO:0070371"}


id: PBO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 4 pseudogene 3","termid":"PBO:0043314"}


id: GO:0003146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the heart cone is displaced to the left with respect to the vector of the anterior-posterior axis.","definition_xrefs":["GOC:mtg_heart","PMID:9334285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic heart tube morphogenesis","termid":"GO:0003143"},{"relation_name":"part_of","term_name":"determination of heart left/right asymmetry","termid":"GO:0061371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart jogging","synonyms":[{"name":"cardiac jogging","type":"exact"}],"termid":"GO:0003146"}


id: GO:0032103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of a response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to external stimulus","synonyms":[{"name":"activation of response to external stimulus","type":"narrow"},{"name":"stimulation of response to external stimulus","type":"narrow"},{"name":"up regulation of response to external stimulus","type":"exact"},{"name":"up-regulation of response to external stimulus","type":"exact"},{"name":"upregulation of response to external stimulus","type":"exact"}],"termid":"GO:0032103"}


id: GO:0036470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of tyrosine 3-monooxygenase (tyrosine hydroxylase).","definition_xrefs":["GOC:bf","GOC:PARL","PMID:19703902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"tyrosine 3-monooxygenase activator activity","synonyms":[{"name":"TH activator activity","type":"exact"},{"name":"tyrosine hydroxylase activator activity","type":"exact"}],"termid":"GO:0036470"}


id: PBO:0061860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodendrocyte transcription factor 1","termid":"PBO:0061860"}


id: _global:regulates_o_results_in_morphogenesis_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"This is the combination of the regulates relation with the results_in_morphogenesis_of relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_morphogenesis_of","secondary_identifiers":["GOREL:0001026"],"termid":"_global:regulates_o_results_in_morphogenesis_of"}


id: PBO:0063840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase type 2 beta","termid":"PBO:0063840"}


id: PBO:0065856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB13, member RAS oncogene family","termid":"PBO:0065856"}


id: PBO:0084562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane bound guanine nucleotide exchange factor; also known as a GEF or GDP-release factor; indirectly regulates adenylate cyclase through activation of Ras1p and Ras2p by stimulating the exchange of GDP for GTP; required for progression through G1; thermosensitivity of the cdc25-5 mutant is functionally complemented by human RASGRF1 or by a fragment of human SOS1 comprising the CDC25-related catalytic domain","termid":"PBO:0084562"}


id: GO:0043167
data:
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binding","type":"related"}],"termid":"GO:0043167","terms_by_termid":{"GO:0000287":null,"GO:0000822":null,"GO:0002134":null,"GO:0002135":null,"GO:0005506":null,"GO:0005507":null,"GO:0005509":null,"GO:0005524":null,"GO:0005525":null,"GO:0005546":null,"GO:0005547":null,"GO:0008198":null,"GO:0008199":null,"GO:0008270":null,"GO:0010181":null,"GO:0016151":null,"GO:0016208":null,"GO:0016594":null,"GO:0019002":null,"GO:0019003":null,"GO:0030145":null,"GO:0030170":null,"GO:0030552":null,"GO:0030955":null,"GO:0030975":null,"GO:0030976":null,"GO:0031210":null,"GO:0036042":null,"GO:0043169":null,"GO:0043295":null,"GO:0043325":null,"GO:0043531":null,"GO:0046870":null,"GO:0046872":null,"GO:0046911":null,"GO:0046914":null,"GO:0050660":null,"GO:0070095":null,"GO:0070300":null,"GO:0070401":null,"GO:0070402":null,"GO:0070403":null,"GO:0071949":null,"GO:0080025":null,"GO:1901612":null,"GO:1901691":null,"GO:1902444":null,"GO:1904047":null}}


id: GO:0010293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-cis-(+)-abscisic aldehyde + H2O + O2 = 2-cis-(+)-abscisate + H+ + H2O2.","definition_xrefs":["RHEA:20529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aryl-aldehyde oxidase activity","termid":"GO:0018488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"abscisic aldehyde oxidase activity","secondary_identifiers":["GO:0033725","EC:1.2.3.14","KEGG_REACTION:R06957","MetaCyc:1.2.3.14-RXN"],"synonyms":[{"name":"AAO3","type":"related"},{"name":"AOdelta","type":"related"},{"name":"abscisic-aldehyde oxidase activity","type":"related"},{"name":"abscisic-aldehyde:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0010293"}


id: PBO:0083370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps verified ORF ALG3","termid":"PBO:0083370"}


id: PBO:0049612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 15","termid":"PBO:0049612"}


id: PBO:0056087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 96","termid":"PBO:0056087"}


id: GO:0033723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fluoroacetaldehyde + NAD+ + H2O = fluoroacetate + NADH + 2 H+.","definition_xrefs":["EC:1.2.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fluoroacetaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:16677"],"synonyms":[{"name":"fluoroacetaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0033723"}


id: GO:0035680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a posterior lateral line neuromast hair cell progresses from its initial formation to its mature state. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell morphogenesis","termid":"GO:0035678"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast hair cell development","termid":"GO:0035677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast hair cell morphogenesis","termid":"GO:0035680"}


id: PBO:0058840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8070","termid":"PBO:0058840"}


id: GO:0005396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane conductance regulator activity (obsolete GO:0005396)","synonyms":[{"name":"transmembrane conductance regulator activity","type":"exact"}],"termid":"GO:0005396"}


id: GO:1904198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of regulation of vascular smooth muscle cell membrane depolarization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20826763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of membrane depolarization","termid":"GO:1904180"},{"relation_name":"negatively_regulates","term_name":"regulation of vascular associated smooth muscle cell membrane depolarization","termid":"GO:1990736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of regulation of vascular associated smooth muscle cell membrane depolarization","synonyms":[{"name":"down regulation of regulation of vascular smooth muscle cell membrane depolarization","type":"exact"},{"name":"down-regulation of regulation of vascular smooth muscle cell membrane depolarization","type":"exact"},{"name":"downregulation of regulation of vascular smooth muscle cell membrane depolarization","type":"exact"},{"name":"inhibition of regulation of vascular smooth muscle cell membrane depolarization","type":"narrow"},{"name":"negative regulation of regulation of vascular smooth muscle cell membrane depolarization","type":"exact"}],"termid":"GO:1904198"}


id: PBO:0060904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal differentiation 4","termid":"PBO:0060904"}


id: PBO:0085467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-mRNA splicing factor; important for catalytic step II of pre-mRNA splicing and plays a role in cell cycle progression, particularly at the G1/S phase transition; required for DNA synthesis during mitosis and meiosis; has WD repeats; thermosensitivity of the cdc40 null mutant is functionally complemented by a chimeric construct containing the N-terminal 156 amino acids of yeast Cdc40p fused to the C-terminal two thirds (297 amino acids) of human CDC40","termid":"PBO:0085467"}


id: PBO:0038463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 3","termid":"PBO:0038463"}


id: PBO:0086723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene; interacts genetically with CHS5, a gene involved in chitin biosynthesis","termid":"PBO:0086723"}


id: PBO:0090188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps68","termid":"PBO:0090188"}


id: PBO:0087291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silenced copy of ALPHA2 at HML; homeobox-domain protein that associates with Mcm1p in haploid cells to repress a-specific gene expression and interacts with a1p in diploid cells to repress haploid-specific gene expression","termid":"PBO:0087291"}


id: PBO:0005832
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.13","termid":"PBO:0005832"}


id: GO:0030222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specializes features of an eosinophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte differentiation","termid":"GO:0030851"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil differentiation","secondary_identifiers":["GO:0035856"],"synonyms":[{"name":"eosinophil cell development","type":"related"},{"name":"eosinophil cell differentiation","type":"exact"},{"name":"eosinophil development","type":"related"}],"termid":"GO:0030222"}


id: PBO:0045579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 1","termid":"PBO:0045579"}


id: PBO:0067567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 720, pseudogene","termid":"PBO:0067567"}


id: GO:0007524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the adult visceral muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral muscle development","termid":"GO:0007522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult visceral muscle development","termid":"GO:0007524"}


id: GO:0051949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051942"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","termid":"GO:0051947"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"down regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"negative regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"negative regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"negative regulation of GABA reuptake","type":"exact"},{"name":"negative regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"negative regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"}],"termid":"GO:0051949"}


id: GO:0006408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of snRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA export from nucleus","termid":"GO:0006405"},{"relation_name":"is_a","term_name":"snRNA transport","termid":"GO:0051030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"snRNA export from nucleus","synonyms":[{"name":"snRNA export from cell nucleus","type":"exact"},{"name":"snRNA export out of nucleus","type":"exact"},{"name":"snRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"snRNA-nucleus export","type":"exact"}],"termid":"GO:0006408"}


id: PBO:0087353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor; component of the U4/U6-U5 snRNP complex","termid":"PBO:0087353"}


id: PR:O94713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.14c","synonyms":[{"name":"Spom972h-meu27","type":"exact"}],"termid":"PR:O94713"}


id: PBO:0040112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with SH3 domain, ankyrin repeat and PH domain 2","termid":"PBO:0040112"}


id: PR:Q9UT52
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mod21 gene.","definition_xrefs":["UniProtKB:Q9UT52","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-tubulin complex subunit mod21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.08c","synonyms":[{"name":"Spom972h-mod21","type":"exact"}],"termid":"PR:Q9UT52"}


id: PBO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Rrp6 (predicted)","termid":"PBO:0000484"}


id: GO:0060332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a response to type II interferon (interferon-gamma). Response to interferon gamma is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of response to type II interferon","termid":"GO:0060330"},{"relation_name":"is_a","term_name":"positive regulation of response to cytokine stimulus","termid":"GO:0060760"},{"relation_name":"positively_regulates","term_name":"response to type II interferon","termid":"GO:0034341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to type II interferon","synonyms":[{"name":"positive regulation of response to gamma-interferon","type":"related"},{"name":"positive regulation of response to immune interferon","type":"exact"},{"name":"positive regulation of response to interferon-gamma","type":"exact"},{"name":"positive regulation of response to type II IFN","type":"broad"}],"termid":"GO:0060332"}


id: PBO:0076964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 1 pseudogene 1","termid":"PBO:0076964"}


id: PBO:0082739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; essential for mitotic growth; RSC6 has a paralog, SNF12, that arose from the whole genome duplication","termid":"PBO:0082739"}


id: GO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell over time, from its formation to the mature structure. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"columnar/cuboidal epithelial cell development","termid":"GO:0002066"}


id: PBO:0109026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3102","termid":"PBO:0109026"}


id: PBO:0047869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(q33)","termid":"PBO:0047869"}


id: FYPO:0000422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of endocytosis is decreased. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased protein level in plasma membrane","termid":"FYPO:0003504"},{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased endocytosis during vegetative growth","synonyms":[{"name":"decreased endocytosis during mitotic cell cycle","type":"related"},{"name":"decreased protein internalization during vegetative growth","type":"narrow"},{"name":"endocytosis: decreased during vegetative growth","type":"related"},{"name":"reduced actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"reduced endocytosis during vegetative growth","type":"exact"}],"termid":"FYPO:0000422"}


id: GO:0006929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another along a substrate such as the extracellular matrix; the migrating cell forms a protrusion that attaches to the substrate.","definition_xrefs":["PMID:14657486","ISBN:0815316194","PMID:11944043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cell migration","synonyms":[{"name":"substrate-bound cell migration","type":"exact"}],"termid":"GO:0006929"}


id: PBO:0067429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 549, pseudogene","termid":"PBO:0067429"}


id: PBO:0056842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056842"}


id: GO:0019511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-proline to form peptidyl-hydroxyproline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline hydroxylation","secondary_identifiers":["GO:0006472"],"termid":"GO:0019511"}


id: PBO:0043232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 3 pseudogene 1","termid":"PBO:0043232"}


id: PBO:0045774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ecm29 proteasome adaptor and scaffold","termid":"PBO:0045774"}


id: GO:1905325
data:
  {"annotated_genes":["SJAG_04259","SJAG_03327"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97435],"is_not":false,"summary":null,"term":"GO:1905325"},{"annotations":[109888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the meiosis I spindle assembly checkpoint.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26483559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiosis I","termid":"GO:0060631"},{"relation_name":"is_a","term_name":"regulation of spindle checkpoint","termid":"GO:0090231"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902102"},{"relation_name":"regulates","term_name":"meiosis I spindle assembly checkpoint signaling","termid":"GO:1905318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03327":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"regulation of meiosis I spindle assembly checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905325","terms_by_termid":{"GO:1905325":null,"GO:1905326":null}}


id: GO:0032473
data:
  {"annotated_genes":["SJAG_00605","SJAG_03464","SJAG_01134","SJAG_04732","SJAG_00368","SJAG_05268","SJAG_00948","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85371,95356,96622,98607,100558,100899,102674,111853],"is_not":false,"summary":null,"term":"GO:0032473"}]},"cv_name":"cellular_component","definition":"The external (cytoplasmic) face of the mitochondrial outer membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"mitochondrial outer membrane","termid":"GO:0005741"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_00605":null,"SJAG_00948":null,"SJAG_01134":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_04732":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of mitochondrial outer membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytosolic side of mitochondrial outer membrane","type":"exact"},{"name":"external leaflet of mitochondrial outer membrane","type":"exact"},{"name":"external side of mitochondrial envelope","type":"related"},{"name":"external side of mitochondrial outer membrane","type":"exact"}],"termid":"GO:0032473","terms_by_termid":{"GO:0032473":null}}


id: GO:0035023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rho protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Rho protein signal transduction","termid":"GO:0007266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Rho protein signal transduction","termid":"GO:0035023"}


id: PBO:0069129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 379, pseudogene","termid":"PBO:0069129"}


id: FYPO:0003867
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of ubiquitinated protein measured in the cell is higher than normal when the cell is in G0 phase. Total protein or a specific protein may be affected.","definition_xrefs":["PMID:20133687","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during G0","termid":"FYPO:0003866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of ubiquitinated protein in cell during G0","synonyms":[{"name":"increased accumulation of ubiquitinated protein in cell during G0","type":"related"},{"name":"increased level of ubiquitinated protein in cell during cell quiescence","type":"exact"},{"name":"increased level of ubiquitinated protein in cell during quiescence","type":"exact"},{"name":"increased ubiquitinated protein level during G0","type":"exact"}],"termid":"FYPO:0003867"}


id: PBO:0088132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein of unknown function; is conserved in mammals; predicted to contain eleven transmembrane helices; interacts with Pdr5p, a protein involved in multidrug resistance","termid":"PBO:0088132"}


id: PBO:0061862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodendrocyte transcription factor 3","termid":"PBO:0061862"}


id: PBO:0109830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-stranded telomeric binding protein Tcg1","termid":"PBO:0109830"}


id: PBO:0078024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 14","termid":"PBO:0078024"}


id: PBO:0044197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin F","termid":"PBO:0044197"}


id: FYPO:0006343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule bundle formation, which normally results in a parallel arrangement of microtubules, does not occur.","definition_xrefs":["GO:0001578","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle formation","termid":"FYPO:0002761"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abolished microtubule bundle formation","synonyms":[{"name":"abolished microtubule array formation","type":"related"},{"name":"abolished microtubule bundling","type":"exact"},{"name":"microtubule bundle formation abolished","type":"exact"}],"termid":"FYPO:0006343"}


id: PBO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein","termid":"PBO:0001785"}


id: PBO:0039130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacyl tRNA synthetase complex interacting multifunctional protein 1","termid":"PBO:0039130"}


id: GO:0018955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenanthrene, a tricyclic aromatic hydrocarbon used in explosives and in the synthesis of dyes and drugs. Although phenanthrene is not mutagenic or carcinogenic, it has been shown to be toxic to marine diatoms, gastropods, mussels, crustaceans, and fish.","definition_xrefs":["GOC:jl","UM-BBD_pathwayID:pha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenanthrene metabolic process","synonyms":[{"name":"phenanthrene metabolism","type":"exact"}],"termid":"GO:0018955"}


id: PBO:0061157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NmrA like redox sensor 2, pseudogene","termid":"PBO:0061157"}


id: PBO:0046422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A6","termid":"PBO:0046422"}


id: PBO:0084135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity Ca2+/Mn2+ P-type ATPase; required for Ca2+ and Mn2+ transport into Golgi; involved in Ca2+ dependent protein sorting, processing; D53A mutant (Mn2+ transporting) is rapamycin sensitive, Q783A mutant (Ca2+ transporting) is rapamycin resistant; Mn2+ transport into Golgi lumen required for rapamycin sensitivity; mutations in human homolog ATP2C1 cause acantholytic skin condition Hailey-Hailey disease; human ATP2C1 can complement yeast null mutant","termid":"PBO:0084135"}


id: PBO:0062227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AZ member 1 pseudogene","termid":"PBO:0062227"}


id: PBO:0031464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_bismuth","termid":"PBO:0031464"}


id: GO:1990234
data:
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id: GO:0072333
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id: PBO:0082831
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id: GO:2000615
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id: PBO:0034280
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id: MOD:01839
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id: PBO:0064332
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id: PR:Q9Y7Z9
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id: GO:1901775
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id: PBO:0074601
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id: PR:O13924
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id: GO:0070654
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id: PBO:0030940
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id: GO:0045613
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id: GO:0035907
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the dorsal aorta over time, from its initial formation to the mature structure. The dorsal aorta is a blood vessel in a single-pass circulatory system that carries oxygenated blood from the gills to the rest of the body. In a single-pass circulatory system blood passes once through the heart to supply the body once.","definition_xrefs":["GOC:dgh","UBERON:0005805","Wikipedia:Aorta","GOC:bf","ZFA:0000014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal aorta development","termid":"GO:0035907"}


id: PBO:0056348
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id: PR:O14008
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id: PBO:0051049
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id: GO:0051886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of timing of anagen, the growth phase of the hair cycle.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hair follicle maturation","termid":"GO:0048817"},{"relation_name":"is_a","term_name":"regulation of timing of anagen","termid":"GO:0051884"},{"relation_name":"negatively_regulates","term_name":"anagen","termid":"GO:0042640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of timing of anagen","synonyms":[{"name":"down regulation of anagen","type":"related"},{"name":"down-regulation of anagen","type":"related"},{"name":"downregulation of anagen","type":"related"},{"name":"inhibition of anagen","type":"narrow"},{"name":"negative regulation of anagen","type":"related"}],"termid":"GO:0051886"}


id: PBO:0000676
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.2.1","termid":"PBO:0000676"}


id: GO:0005655
data:
  {"annotated_genes":["SJAG_06613","SJAG_01369","SJAG_03234","SJAG_04582","SJAG_00955","SJAG_02547","SJAG_01623","SJAG_04916","SJAG_00306","SJAG_02553","SJAG_03796"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87189,90807,92896,95586,98155,100638,100856,109583,111391,111476,114657],"is_not":false,"summary":null,"term":"GO:0005655"}]},"cv_name":"cellular_component","definition":"A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules.","definition_xrefs":["GOC:mah","PMID:12045094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multimeric ribonuclease P complex","termid":"GO:0030681"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00955":null,"SJAG_01369":null,"SJAG_01623":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03796":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005730","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nucleolar ribonuclease P complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleolar RNase P complex","type":"exact"}],"termid":"GO:0005655","terms_by_termid":{"GO:0005655":null}}


id: PBO:0028942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_non-growing_cell_tip","termid":"PBO:0028942"}


id: GO:0030901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles).","definition_xrefs":["PMID:4992177","PMID:4975589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain development","synonyms":[{"name":"mesencephalon development","type":"exact"}],"termid":"GO:0030901"}


id: GO:0003148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the outflow tract septum are generated and organized. The outflow tract septum is a partition in the outflow tract.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outflow tract septum morphogenesis","termid":"GO:0003148"}


id: PBO:0078321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 3","termid":"PBO:0078321"}


id: GO:1900553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of asperfuranone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"diol catabolic process","termid":"GO:0034313"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"asperfuranone metabolic process","termid":"GO:1900552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"asperfuranone catabolic process","synonyms":[{"name":"asperfuranone breakdown","type":"exact"},{"name":"asperfuranone catabolism","type":"exact"},{"name":"asperfuranone degradation","type":"exact"}],"termid":"GO:1900553"}


id: PR:O74765
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proline--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.03","secondary_identifiers":["UniProtKB:O74765"],"synonyms":[{"name":"ProRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PARS2","type":"exact"},{"name":"prolyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74765"}


id: PBO:0077386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 126B","termid":"PBO:0077386"}


id: PBO:0083424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF STP3/YLR375W","termid":"PBO:0083424"}


id: PBO:0083505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF BDF2/YDL070W","termid":"PBO:0083505"}


id: GO:0070397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving wall teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues and which is covalently linked to peptidoglycan.","definition_xrefs":["PMID:16020688","GOC:add","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wall teichoic acid metabolic process","synonyms":[{"name":"WTA metabolic process","type":"exact"},{"name":"wall teichoic acid metabolism","type":"exact"}],"termid":"GO:0070397"}


id: GO:0002864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an acute inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of inflammatory response to antigenic stimulus","termid":"GO:0002861"},{"relation_name":"regulates","term_name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acute inflammatory response to antigenic stimulus","termid":"GO:0002864"}


id: GO:0050879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any physiological process involved in changing the position of a multicellular organism or an anatomical part of a multicellular organism.","definition_xrefs":["GOC:tb","GOC:mtg_muscle","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal movement","termid":"GO:0050879"}


id: GO:0050698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + proteoglycan = adenosine 3',5'-bisphosphate + proteoglycan sulfate. A proteoglycan is a glycoprotein whose carbohydrate units are glycosaminoglycans.","definition_xrefs":["EC:2.8.2.-","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"proteoglycan sulfotransferase activity","synonyms":[{"name":"proteoglycan sulfate transfer","type":"related"},{"name":"proteoglycan sulphotransferase activity","type":"exact"}],"termid":"GO:0050698"}


id: FYPO:0001509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to chromatin","termid":"FYPO:0006163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to chromatin during vegetative growth","synonyms":[{"name":"normal protein localisation to chromatin during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001509"}


id: PR:O14337
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl7 gene.","definition_xrefs":["UniProtKB:O14337","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L7, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.02c","synonyms":[{"name":"Spom972h-mrpl7","type":"exact"}],"termid":"PR:O14337"}


id: PBO:0027349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_centromere_central_core","termid":"PBO:0027349"}


id: PBO:0052197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily N member 1","termid":"PBO:0052197"}


id: GO:0004608
data:
  {"annotated_genes":["SJAG_00825"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103490],"is_not":false,"summary":null,"term":"GO:0004608"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phosphatidylethanolamine = S-adenosyl-L-homocysteine + H+ + phosphatidyl-N-methylethanolamine.","definition_xrefs":["EC:2.1.1.17","RHEA:11164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00825":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylethanolamine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483174","KEGG_REACTION:R02056","MetaCyc:2.1.1.17-RXN"],"synonyms":[{"name":"LMTase activity","type":"related"},{"name":"PEMT","type":"related"},{"name":"S-adenosyl-L-methionine:phosphatidylethanolamine N-methyltransferase activity","type":"related"},{"name":"lipid methyl transferase activity","type":"related"},{"name":"phosphatidylethanolamine methyltransferase activity","type":"related"},{"name":"phosphatidylethanolamine-N-methylase activity","type":"related"},{"name":"phosphatidylethanolamine-S-adenosylmethionine methyltransferase activity","type":"related"}],"termid":"GO:0004608","terms_by_termid":{"GO:0004608":null}}


id: PBO:0029538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_tapered_cells_(obsolete_FYPO:0002184)","termid":"PBO:0029538"}


id: PBO:0080811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 6 pseudogene 1","termid":"PBO:0080811"}


id: GO:0009239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of enterobactin, a catechol-derived siderochrome of Enterobacteria; enterobactin (N',N',N''-(2,6,10-trioxo-1,5,9-triacyclodecane-3,7,11-triyl)tris(2,3-dihydroxy)benzamide) is a self-triester of 2,3-dihydroxy-N-benzoyl-L-serine and a product of the shikimate pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enterobactin metabolic process","termid":"GO:0009238"},{"relation_name":"is_a","term_name":"catechol-containing siderophore biosynthetic process","termid":"GO:0019540"},{"relation_name":"is_a","term_name":"macrolide biosynthetic process","termid":"GO:0033068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"enterobactin biosynthetic process","secondary_identifiers":["MetaCyc:ENTBACSYN-PWY","GO:0031191","GO:0031192"],"synonyms":[{"name":"enterobactin anabolism","type":"exact"},{"name":"enterobactin biosynthesis","type":"exact"},{"name":"enterobactin biosynthetic process, peptide formation","type":"narrow"},{"name":"enterobactin biosynthetic process, peptide modification","type":"narrow"},{"name":"enterobactin formation","type":"exact"},{"name":"enterobactin synthesis","type":"exact"},{"name":"enterobactin synthetase","type":"related"},{"name":"enterochelin biosynthesis","type":"exact"},{"name":"enterochelin biosynthetic process","type":"exact"}],"termid":"GO:0009239"}


id: GO:0052142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis within host (obsolete GO:0052142)","termid":"GO:0052142"}


id: GO:0120165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a perithecium over time, from its formation to the mature structure. Peritheicum is a flask-shaped fruiting body of certain molds and ascomycetous fungi having a pore for the escape of spores. In the ascomycetous fungi such as Neurospora crassa and Sordaria macrospora, these perithecia are formed in the sexual phase and they discharge ascospores through the ostiolum at the tip of the perithecial neck.","definition_xrefs":["DOI:10.1007/978-3-642-00286-1_2","PMID:125266","PMID:20739093","PMID:25311923","PMID:19547974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perithecium development","termid":"GO:0120165"}


id: PBO:0027233
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_midzone","termid":"PBO:0027233"}


id: PATO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000746 consumption value (obsolete PATO:0000746)","termid":"PATO:0000746"}


id: GO:0070764
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is formed by the association of the Notch ligand Delta1 with the gamma-secretase complex.","definition_xrefs":["PMID:12794186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"gamma-secretase-Delta1 complex","termid":"GO:0070764"}


id: PBO:0030085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_lithium","termid":"PBO:0030085"}


id: PBO:0081175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 21","termid":"PBO:0081175"}


id: PBO:0029467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mannose_binding","termid":"PBO:0029467"}


id: PBO:0051233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-31-1 (pseudogene)","termid":"PBO:0051233"}


id: PBO:0029049
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleus_mislocalized_to_cell_cortex_during_nitrogen_starvation","termid":"PBO:0029049"}


id: PBO:0071975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 3","termid":"PBO:0071975"}


id: PBO:0040658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 2","termid":"PBO:0040658"}


id: FYPO:0005290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is decreased.","definition_xrefs":["PomBase:mah","PMID:26132084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane at cell division site during vegetative growth","termid":"FYPO:0005544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to plasma membrane at cell division site during vegetative growth","synonyms":[{"name":"decreased protein localisation to plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"decreased protein localization to plasma membrane at cell division site during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to plasma membrane at cell division site during vegetative growth","type":"exact"}],"termid":"FYPO:0005290"}


id: PBO:0091768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific polypeptide matMc","termid":"PBO:0091768"}


id: PBO:0042940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin assembly factor 1 subunit A","termid":"PBO:0042940"}


id: PBO:0086123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for fermentation at low temperature; plays a role in the maturation of secretory proteins; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086123"}


id: MOD:01817
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a 2'-oxo-L-tryptophan.","definition_xrefs":["RESID:AA0543","PubMed:9461080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidation of tryptophan to 2'-oxo-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"2'-oxo-L-tryptophan","type":"exact"},{"name":"2-azanyl-3-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"2-oxo-L-tryptophan","type":"exact"},{"name":"2-oxotryptophan","type":"exact"}],"termid":"MOD:01817"}


id: PBO:0030816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_aconitate_hydratase_activity","termid":"PBO:0030816"}


id: PBO:0085724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the HOG (high osmolarity glycerol) pathway; negatively regulates Hog1p by recruitment of phosphatase Ptc1p to the Pbs2p-Hog1p complex; interacts with Bck1p and down regulates the cell wall integrity pathway; found in the nucleus and cytoplasm; contains an SH3 domain and a Ptc1p binding domain (PBM)","termid":"PBO:0085724"}


id: PBO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC domain protein","termid":"PBO:0002326"}


id: PBO:0083280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the essential gene UGP1 gene and uncharacterized ORF YKL037W","termid":"PBO:0083280"}


id: GO:0033663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont reduces of the levels of defense-related proteins in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host defense-related protein level (obsolete GO:0033663)","termid":"GO:0033663"}


id: PBO:0079650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 T","termid":"PBO:0079650"}


id: GO:0051018
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034236"}]},"cv_name":"molecular_function","definition":"Binding to a protein kinase A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"protein kinase A binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PKA binding","type":"exact"},{"name":"protein kinase A anchoring activity","type":"related"}],"termid":"GO:0051018","terms_by_termid":{"GO:0034236":null}}


id: FYPO:0007822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which vacuoles are larger than normal in G0 phase.","definition_xrefs":["PMID:34147496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large vacuoles","termid":"FYPO:0007821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"large vacuoles during G0","synonyms":[{"name":"enlarged vacuoles during G0","type":"exact"},{"name":"large vacuoles during cell quiescence","type":"exact"},{"name":"large vacuoles during quiescence","type":"exact"}],"termid":"FYPO:0007822"}


id: PBO:0055148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2567","termid":"PBO:0055148"}


id: SO:1001288
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoding stimulatory signal that is a stop codon and has effect on efficiency of recoding.","definition_xrefs":["SO:ke","PMID:12519954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_codon_signal","synonyms":[{"name":"stop codon signal","type":"exact"}],"termid":"SO:1001288"}


id: PBO:0045178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B1","termid":"PBO:0045178"}


id: GO:0045124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bone tissue loss (resorption).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone remodeling","termid":"GO:0046850"},{"relation_name":"regulates","term_name":"bone resorption","termid":"GO:0045453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bone resorption","termid":"GO:0045124"}


id: PBO:0060960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor zeta","termid":"PBO:0060960"}


id: PBO:0031362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_K-252a","termid":"PBO:0031362"}


id: PBO:0088648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination mediator, RecA family ATPase Rad57/Rhp57","termid":"PBO:0088648"}


id: PBO:0067358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 456, pseudogene","termid":"PBO:0067358"}


id: PBO:0071917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 2","termid":"PBO:0071917"}


id: GO:1903495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dehydroepiandrosterone stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","GOC:mr","PMID:3585228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to dehydroepiandrosterone","termid":"GO:1903494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dehydroepiandrosterone","termid":"GO:1903495"}


id: GO:0001408
data:
  {"annotated_genes":["SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63283,111239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"}]},"cv_name":"biological_process","definition":"The directed movement of guanine nucleotides, GTP, GDP, and/or GMP, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transport","termid":"GO:0015865"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00760":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"guanine nucleotide transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0001408","terms_by_termid":{"GO:1903790":null}}


id: PBO:0044261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXADR pseudogene 3","termid":"PBO:0044261"}


id: PBO:0018161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase, involved in cytoplasmic translational initiation (predicted)","termid":"PBO:0018161"}


id: PR:O14348
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein Dr1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03561","PANTHER:PTHR11064:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative cofactor 2 complex subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.02","secondary_identifiers":["UniProtKB:O14348"],"synonyms":[{"name":"NC2 complex subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DR1","type":"exact"}],"termid":"PR:O14348"}


id: PBO:0084801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; almost completely overlaps ORF HVG1/YER039C","termid":"PBO:0084801"}


id: FYPO:0007357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell does not contain a detectable Smp focus.","definition_xrefs":["PomBase:mah","PMID:31811152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"is_a","term_name":"altered level of macromolecular complex","termid":"FYPO:0007316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"Smp focus absent from cell","synonyms":[{"name":"Sme2 focus absent from cell","type":"narrow"},{"name":"Smp dot complex absent from cell","type":"exact"},{"name":"Smp focus absent from cell during meiotic cell cycle","type":"exact"},{"name":"absence of Smp focus","type":"exact"},{"name":"absent Smp focus","type":"exact"}],"termid":"FYPO:0007357"}


id: PBO:0087812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tetrameric histone acetyltransferase; has similarity to Gcn5p, Hat1p, Elp3p, and Hpa3p; acetylates histones H3 and H4 in vitro and exhibits autoacetylation activity; also acetylates polyamines","termid":"PBO:0087812"}


id: PBO:0113114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) localized protein; involved in ER-associated protein degradation (ERAD), ER stress, and homeostasis; acts as disaggregase that removes misfolded membrane protein aggregates; interacts with components of ERAD-L and ERAD-C and Cdc48p; derlin-like family member similar to Der1p","termid":"PBO:0113114"}


id: FYPO:0002391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at ribosomal DNA repeat regions is decreased.","definition_xrefs":["PMID:24945319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at ncRNA genes","termid":"FYPO:0004346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at rDNA","secondary_identifiers":["FYPO:0006350"],"synonyms":[{"name":"decreased protein localisation to chromatin at rDNA","type":"exact"},{"name":"decreased protein localization to chromatin at rDNA during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at rDNA during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at rRNA genes","type":"exact"},{"name":"decreased protein localization to chromatin at ribosomal DNA","type":"exact"},{"name":"decreased protein localization to rDNA","type":"exact"},{"name":"reduced protein localization to chromatin at rDNA","type":"exact"}],"termid":"FYPO:0002391"}


id: PR:O74341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit gamma that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03080","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.08c","secondary_identifiers":["UniProtKB:O74341"],"synonyms":[{"name":"CCT-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT3","type":"exact"},{"name":"TCP-1-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74341"}


id: PR:P46595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc4 gene.","definition_xrefs":["UniProtKB:P46595","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.02","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc4","type":"exact"},{"name":"ubiquitin carrier protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P46595"}


id: GO:0051006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of the enzyme lipoprotein lipase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein lipase activity","termid":"GO:0051004"},{"relation_name":"is_a","term_name":"positive regulation of triglyceride lipase activity","termid":"GO:0061365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipoprotein lipase activity","synonyms":[{"name":"activation of lipoprotein lipase activity","type":"narrow"},{"name":"stimulation of lipoprotein lipase activity","type":"narrow"},{"name":"up regulation of lipoprotein lipase activity","type":"exact"},{"name":"up-regulation of lipoprotein lipase activity","type":"exact"},{"name":"upregulation of lipoprotein lipase activity","type":"exact"}],"termid":"GO:0051006"}


id: GO:0021546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the rhombomere over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere development","termid":"GO:0021546"}


id: GO:0036454
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that has growth factor activity.","definition_xrefs":["GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"growth factor complex","termid":"GO:0036454"}


id: GO:0044029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic gene regulation mechanism that positively regulates gene expression by demethylation of cytosine residues in chromosomal CpG islands. CpG islands are genomic regions that contain a high frequency of the CG dinucleotide and are often associated with the transcription start site of genes.","definition_xrefs":["Wikipedia:Cpg_island","PMID:36150101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription initiation-coupled chromatin remodeling","termid":"GO:0045815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"positive regulation of gene expression via chromosomal CpG island demethylation","synonyms":[{"name":"DNA demethylation","type":"broad"},{"name":"DNA hypomethylation of CpG island","type":"exact"},{"name":"hypomethylation of CpG island","type":"exact"},{"name":"positive regulation of gene expression via chromosomal CpG dinucleotide demethylation","type":"exact"}],"termid":"GO:0044029"}


id: SO:0000603
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Group II introns are found in rRNA, tRNA and mRNA of organelles in fungi, plants and protists, and also in mRNA in bacteria. They are large self-splicing ribozymes and have 6 structural domains (usually designated dI to dVI). A subset of group II introns also encode essential splicing proteins in intronic ORFs. The length of these introns can therefore be up to 3kb. Splicing occurs in almost identical fashion to nuclear pre-mRNA splicing with two transesterification steps. The 2' hydroxyl of a bulged adenosine in domain VI attacks the 5' splice site, followed by nucleophilic attack on the 3' splice site by the 3' OH of the upstream exon. Protein machinery is required for splicing in vivo, and long range intron to intron and intron-exon interactions are important for splice site positioning. Group II introns are further sub-classified into groups IIA and IIB which differ in splice site consensus, distance of bulged A from 3' splice site, some tertiary interactions, and intronic ORF phylogeny.","direct_ancestors":[{"relation_name":"is_a","term_name":"autocatalytically_spliced_intron","termid":"SO:0000588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_II_intron","secondary_identifiers":["http://en.wikipedia.org/wiki/Group_II_intron"],"synonyms":[{"name":"group II intron","type":"exact"}],"termid":"SO:0000603"}


id: PBO:0003803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine phosphatase Ser2 (predicted)","termid":"PBO:0003803"}


id: GO:0032910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of transforming growth factor-beta3.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta production","termid":"GO:0071634"},{"relation_name":"regulates","term_name":"transforming growth factor beta3 production","termid":"GO:0032907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of transforming growth factor beta3 production","synonyms":[{"name":"regulation of TGF-B3 production","type":"exact"},{"name":"regulation of TGFB3 production","type":"exact"},{"name":"regulation of transforming growth factor-beta3 production","type":"exact"}],"termid":"GO:0032910"}


id: MOD:00397
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with iodoacetamide, usually replacement of a reactive hydrogen with a methylcarboxamido group.","definition_xrefs":["PubMed:11327326","PubMed:11510821","Unimod:4","PubMed:12422359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetamide derivatized residue","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"}],"termid":"MOD:00397"}


id: PBO:0041948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 8","termid":"PBO:0041948"}


id: PBO:0066409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELT like 1","termid":"PBO:0066409"}


id: PBO:0085243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; potential role in the secretory pathway; seamless-GFP and mCherry fusion proteins localize to the vacuole, while SWAT-GFP fusion localizes to both the endoplasmic reticulum and vacuole; suppresses toxicity of slow-folding human Z-type alpha1-antitrypsin variant associated with liver cirrhosis and emphysema","termid":"PBO:0085243"}


id: PBO:0072618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSPH1 divergent transcript","termid":"PBO:0072618"}


id: GO:0090184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:tb","GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"positively_regulates","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of kidney development","synonyms":[{"name":"positive regulation of nephrogenesis","type":"related"}],"termid":"GO:0090184"}


id: PBO:0003119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 variant, CENP-T ortholog (predicted)","termid":"PBO:0003119"}


id: PBO:0046113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1","termid":"PBO:0046113"}


id: GO:1900436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to starvation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900430"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:1900434"},{"relation_name":"positively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:0036170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation","synonyms":[{"name":"activation of filamentous growth of a population of unicellular organisms in response to starvation","type":"narrow"},{"name":"up regulation of filamentous growth of a population of unicellular organisms in response to starvation","type":"exact"},{"name":"up-regulation of filamentous growth of a population of unicellular organisms in response to starvation","type":"exact"},{"name":"upregulation of filamentous growth of a population of unicellular organisms in response to starvation","type":"exact"}],"termid":"GO:1900436"}


id: PR:Q9Y7Y3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC365.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Y3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C365.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.04c","synonyms":[{"name":"Spom972h-SPBC365.04c","type":"exact"}],"termid":"PR:Q9Y7Y3"}


id: GO:0022842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a solute across a membrane via a narrow pore channel that may be gated or ungated.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"narrow pore channel activity","termid":"GO:0022842"}


id: GO:0006382
data:
  {"annotated_genes":["SJAG_04189","SJAG_04380","SJAG_00352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100339,100053,97215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002100"}]},"cv_name":"biological_process","definition":"The conversion of an adenosine residue to inosine in an RNA molecule by deamination.","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base conversion or substitution editing","termid":"GO:0016553"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00352":null,"SJAG_04189":null,"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adenosine to inosine editing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006382","terms_by_termid":{"GO:0002100":null}}


id: PATO:0001628
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wholeness quality inhering in a bearer by virtue of the bearer's lacks enough functionality.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sufficiency","termid":"PATO:0001626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insufficient","synonyms":[{"name":"inadequate ","type":"related"}],"termid":"PATO:0001628"}


id: PBO:0004460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp43 (predicted)","termid":"PBO:0004460"}


id: GO:0102504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: luteolinidin + UDP-alpha-D-glucose = luteolinidin 5-O-glucoside + UDP + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete luteolinidin 5-O-glucosyltransferase activity (obsolete GO:0102504)","termid":"GO:0102504"}


id: GO:0061919
data:
  {"annotated_genes":["SJAG_03100","SJAG_04552","SJAG_00850","SJAG_00763","SJAG_00704","SJAG_04963","SJAG_00004","SJAG_00114","SJAG_01251","SJAG_03136","SJAG_05261","SJAG_01135","SJAG_06309","SJAG_01274","SJAG_03851","SJAG_04021","SJAG_00645","SJAG_04655","SJAG_00059","SJAG_01382","SJAG_01283","SJAG_04219","SJAG_03435","SJAG_05184","SJAG_04502","SJAG_03467","SJAG_01722","SJAG_03371","SJAG_00169","SJAG_05000","SJAG_02432","SJAG_03170","SJAG_05210","SJAG_05289","SJAG_00724","SJAG_02723","SJAG_04249","SJAG_05346","SJAG_00824","SJAG_02699","SJAG_04837","SJAG_00732","SJAG_02100","SJAG_01716","SJAG_02441","SJAG_04860","SJAG_05017","SJAG_00284","SJAG_04759","SJAG_00355","SJAG_02765","SJAG_04435","SJAG_00079","SJAG_00380","SJAG_03718","SJAG_02433","SJAG_04496","SJAG_01467","SJAG_01561","SJAG_02414","SJAG_01415","SJAG_02655","SJAG_02525","SJAG_00457","SJAG_02640","SJAG_02315","SJAG_00053","SJAG_05245","SJAG_04991","SJAG_03345","SJAG_02663","SJAG_01783","SJAG_01876","SJAG_01184","SJAG_04232","SJAG_01509","SJAG_01080","SJAG_04294","SJAG_00029","SJAG_00115","SJAG_02539","SJAG_04023","SJAG_00820"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035973"},{"annotations":[107784,109941,99693,113885,71628,89000,88716,93699,90732,86199,90918,109746,83968,93985,100689,105865,92746,87716,96077],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000045"},{"annotations":[109747,86200,85378],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097352"},{"annotations":[90733],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[112987,85736,91623,90422,93743,104654,103725,88216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006914"},{"annotations":[107785,96383,71629,104742,93714,94708,86201,109748,99694,91550,105866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000422"},{"annotations":[98233,93715,94709,96384,96078,104743,93700,83969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030242"},{"annotations":[93716,96385,104744,105867,94710,86202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[93702,98235,106371,105522,86203,93717,93986,94711,84801,88718,99844,89629,105904,113886,90919,87717,100978,104657,109749,111252,97224,95212,98634,107611,101046,105868,90021,107786,96079,105924,96386,104746,90735,89001,83970,93427,106760,99695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016236"},{"annotations":[110605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016237"},{"annotations":[96080,111314,90736,91074,89002,100914,83971,93987,88719,86090,95797,106761,85172,113887,87718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000423"},{"annotations":[105359,114431],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010507"},{"annotations":[102742],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0016242"},{"annotations":[94712,105869,96387,104658,95500,93718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044804"},{"annotations":[90025,90352,87719,100915,83972,99696,93988,71627,96081,95798,112318,113888,104303,104747,107787,86204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"},{"annotations":[104659,104748],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000786"},{"annotations":[93732],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[110671,107052,90279,94978,103495,107940,105775,95544],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010508"},{"annotations":[67902],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903599"},{"annotations":[94118,102343],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0016239"},{"annotations":[85641],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140501"},{"annotations":[67553,113889,71630,94664],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010506"},{"annotations":[113890,99697,104660,111315,71636,100917,104749,95800,96082,112694,86526,95501,100475,106762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061709"},{"annotations":[96083,109645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034517"}]},"cv_name":"biological_process","definition":"A cellular process involving delivery of a portion of the cytoplasm to lysosomes or to the plant or fungal vacuole that does not involve direct transport through the endocytic or vacuolar protein sorting (Vps) pathways. This process typically leads to degradation of the cargo; however, it can also be used to deliver resident proteins, such as in the cytoplasm-to-vacuole targeting (Cvt) pathway.","definition_xrefs":["PMID:22966490","PMID:28596378","PMID:21997368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":83,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00029":null,"SJAG_00053":null,"SJAG_00059":null,"SJAG_00079":null,"SJAG_00114":null,"SJAG_00115":null,"SJAG_00169":null,"SJAG_00284":null,"SJAG_00355":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00645":null,"SJAG_00704":null,"SJAG_00724":null,"SJAG_00732":null,"SJAG_00763":null,"SJAG_00820":null,"SJAG_00824":null,"SJAG_00850":null,"SJAG_01080":null,"SJAG_01135":null,"SJAG_01184":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01415":null,"SJAG_01467":null,"SJAG_01509":null,"SJAG_01561":null,"SJAG_01716":null,"SJAG_01722":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02100":null,"SJAG_02315":null,"SJAG_02414":null,"SJAG_02432":null,"SJAG_02433":null,"SJAG_02441":null,"SJAG_02525":null,"SJAG_02539":null,"SJAG_02640":null,"SJAG_02655":null,"SJAG_02663":null,"SJAG_02699":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_03100":null,"SJAG_03136":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03371":null,"SJAG_03435":null,"SJAG_03467":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04021":null,"SJAG_04023":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04249":null,"SJAG_04294":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04552":null,"SJAG_04655":null,"SJAG_04759":null,"SJAG_04837":null,"SJAG_04860":null,"SJAG_04963":null,"SJAG_04991":null,"SJAG_05000":null,"SJAG_05017":null,"SJAG_05184":null,"SJAG_05210":null,"SJAG_05245":null,"SJAG_05261":null,"SJAG_05289":null,"SJAG_05346":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"process utilizing autophagic mechanism","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0061919","terms_by_termid":{"GO:0000045":null,"GO:0000422":null,"GO:0000423":null,"GO:0006914":null,"GO:0010506":null,"GO:0010507":null,"GO:0010508":null,"GO:0016236":null,"GO:0016237":null,"GO:0016239":null,"GO:0016240":null,"GO:0016242":null,"GO:0030242":null,"GO:0034517":null,"GO:0034727":null,"GO:0035973":null,"GO:0044804":null,"GO:0061709":null,"GO:0061723":null,"GO:0097352":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null,"GO:2000786":null}}


id: GO:0070276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any halogen, elements of Group VII; includes metabolism of halogen-containing compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"halogen metabolic process","synonyms":[{"name":"halogen metabolism","type":"exact"}],"termid":"GO:0070276"}


id: GO:0051584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the catecholamine neurotransmitter dopamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine uptake involved in synaptic transmission","termid":"GO:0051940"},{"relation_name":"regulates","term_name":"dopamine uptake involved in synaptic transmission","termid":"GO:0051583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of dopamine uptake involved in synaptic transmission","synonyms":[{"name":"regulation of dopamine import involved in synaptic transmission","type":"exact"}],"termid":"GO:0051584"}


id: PR:Q9UUE2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cnt5 gene.","definition_xrefs":["UniProtKB:Q9UUE2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein csx2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.08c","synonyms":[{"name":"Spom972h-cnt5","type":"exact"}],"termid":"PR:Q9UUE2"}


id: PBO:0040034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo like helical domain containing 1","termid":"PBO:0040034"}


id: GO:1901608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vesicle transport along microtubule.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle transport along microtubule","termid":"GO:1902513"},{"relation_name":"regulates","term_name":"vesicle transport along microtubule","termid":"GO:0047496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of vesicle transport along microtubule","synonyms":[{"name":"regulation of microtubule-based vesicle localization","type":"exact"}],"termid":"GO:1901608"}


id: PBO:0080765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X chromosome inactivation center","termid":"PBO:0080765"}


id: SO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, of a nucleotide molecule, that interacts selectively and non-covalently with polypeptide residues of a nuclease.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease_binding_site","synonyms":[{"name":"nuclease binding site","type":"exact"}],"termid":"SO:0000059"}


id: PBO:0061424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NQO1 divergent transcript","termid":"PBO:0061424"}


id: RO:0002639
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of intercellular endoparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"has_endoparasite","termid":"RO:0002635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_intercellular_endoparasite","termid":"RO:0002639"}


id: PBO:0057744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1539","termid":"PBO:0057744"}


id: PBO:0046272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endomucin","termid":"PBO:0046272"}


id: FYPO:0002705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to methionine. Cells stop growing (and may die) at a concentration of methionine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to methionine","synonyms":[{"name":"hypersensitive to methionine","type":"exact"},{"name":"methionine inhibited","type":"exact"},{"name":"sensitive to methionine during mitotic cell cycle","type":"related"},{"name":"sensitive to methionine during vegetative growth","type":"exact"}],"termid":"FYPO:0002705"}


id: PBO:0040065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPP19 pseudogene 1","termid":"PBO:0040065"}


id: GO:0018775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxymuconate semialdehyde + H2O = formate + 2-oxopent-4-enoate.","definition_xrefs":["EC:3.7.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxymuconate-semialdehyde hydrolase activity","secondary_identifiers":["MetaCyc:3.7.1.9-RXN","RHEA:14549","UM-BBD_enzymeID:e0139"],"synonyms":[{"name":"2-hydroxymuconate-semialdehyde formylhydrolase activity","type":"related"},{"name":"2-hydroxymuconic semialdehyde hydrolase activity","type":"related"},{"name":"HMSH","type":"related"},{"name":"HOD hydrolase activity","type":"related"}],"termid":"GO:0018775"}


id: GO:0033440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an ACG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488","GO:0060090"],"is_obsolete":false,"name":"ACG codon-amino acid adaptor activity","synonyms":[{"name":"threonine tRNA","type":"related"}],"termid":"GO:0033440"}


id: FYPO:0006840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which LinE complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal LinE complex assembly","synonyms":[{"name":"normal linear element protein complex assembly","type":"exact"}],"termid":"FYPO:0006840"}


id: FYPO:0006055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is normal (i.e. indistinguishable from wild type) during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle pole body","termid":"FYPO:0003541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle pole body during meiosis II","synonyms":[{"name":"normal protein localisation to meiotic spindle pole body during meiosis II","type":"exact"},{"name":"normal protein localization to meiotic SPB during meiosis II","type":"exact"},{"name":"normal protein localization to meiotic spindle pole body during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006055"}


id: PBO:0004437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex alpha subunit Egd2","termid":"PBO:0004437"}


id: GO:0061562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of a cranial ganglion. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion structural organization","termid":"GO:0061555"},{"relation_name":"part_of","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"cranial ganglion morphogenesis","termid":"GO:0061559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion structural organization","synonyms":[{"name":"cranial ganglia structural organization","type":"related"}],"termid":"GO:0061562"}


id: PBO:0090114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase Inp53","termid":"PBO:0090114"}


id: GO:0042757
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Extremely large, unmyelinated axon found in invertebrates. Has high conduction speeds and is usually involved in panic or escape responses.","definition_xrefs":["PMID:9705477","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"giant axon","termid":"GO:0042757"}


id: PBO:0061943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily R member 1 pseudogene","termid":"PBO:0061943"}


id: PBO:0005090
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undergoes depletion in translin deficient cells via a translin-dependent proteasome independent pathway","termid":"PBO:0005090"}


id: GO:0051497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of actin filament bundle assembly","termid":"GO:0032232"},{"relation_name":"is_a","term_name":"regulation of stress fiber assembly","termid":"GO:0051492"},{"relation_name":"negatively_regulates","term_name":"stress fiber assembly","termid":"GO:0043149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"negative regulation of stress fiber assembly","synonyms":[{"name":"down regulation of stress fiber formation","type":"related"},{"name":"down-regulation of stress fiber formation","type":"exact"},{"name":"downregulation of stress fiber formation","type":"related"},{"name":"inhibition of stress fiber formation","type":"narrow"},{"name":"negative regulation of stress fibre biosynthesis","type":"related"},{"name":"negative regulation of stress fibre formation","type":"related"}],"termid":"GO:0051497"}


id: PBO:0001633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPs complex subunit Pep5/Vps11 (predicted)","termid":"PBO:0001633"}


id: FYPO:0001166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing fructose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on fructose carbon source","synonyms":[{"name":"normal cell population growth on fructose carbon source","type":"exact"},{"name":"normal vegetative cell population growth on fructose carbon source","type":"exact"}],"termid":"FYPO:0001166"}


id: PBO:0014303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMR domain protein, possibly involved in DNA repair and neddylation","termid":"PBO:0014303"}


id: PBO:0088707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP Gyp2","termid":"PBO:0088707"}


id: GO:0051846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of immune avoidance that directly affects the symbiont immune system, e.g. blocking any stage in symbiont MHC class I and II presentation. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12439615"],"gene_count":0,"genotype_count":0,"name":"obsolete active evasion of symbiont immune response (obsolete GO:0051846)","synonyms":[{"name":"active evasion of symbiont immune response","type":"exact"},{"name":"active immune evasion","type":"broad"}],"termid":"GO:0051846"}


id: PBO:0050494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B4","termid":"PBO:0050494"}


id: PBO:0034119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pollinated_by","termid":"PBO:0034119"}


id: PR:P0CY17
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mat1-Mc gene.","definition_xrefs":["UniProtKB:P0CY17","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mc (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.09","synonyms":[{"name":"Spom972h-mat1-Mc","type":"exact"},{"name":"mat-Mc (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CY17"}


id: PBO:0017931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Mgr2 (predicted)","termid":"PBO:0017931"}


id: FYPO:0006579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to manganese. Cells stop growing (and may die) at a concentration of manganese ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to manganese","synonyms":[{"name":"hypersensitive to manganese","type":"exact"},{"name":"sensitive to manganese during mitotic cell cycle","type":"related"},{"name":"sensitive to manganese during vegetative growth","type":"exact"},{"name":"sensitive to manganese ions","type":"exact"}],"termid":"FYPO:0006579"}


id: PBO:0087886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor and activator; involved in repression of flocculation-related genes, and activation of stress responsive genes; has direct role in INO1 transcriptional memory; negatively regulated by cAMP-dependent protein kinase A subunit Tpk2p; premature stop codon (C1430T, Q477-stop) in SK1 background is linked to the aggressively invasive phenotype of SK1 relative to BY4741 (S288C)","termid":"PBO:0087886"}


id: PBO:0016897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA (N6-adenosine)-methyltransferase Ime4 (predicted)","termid":"PBO:0016897"}


id: PBO:0072873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SATB2 antisense RNA 1","termid":"PBO:0072873"}


id: FYPO:0005888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased, and some of the protein is present in the nucleoplasm instead.","definition_xrefs":["PomBase:mah","PMID:27666591"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to nucleoplasm","termid":"FYPO:0002843"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleoplasm","termid":"FYPO:0002843"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm","synonyms":[{"name":"decreased protein localisation to centromeric chromatin, with protein mislocalised to nucleoplasm","type":"exact"},{"name":"decreased protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at centromere, with protein mislocalized to nucleoplasm","type":"exact"},{"name":"reduced protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm","type":"exact"}],"termid":"FYPO:0005888"}


id: GO:0102911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-secoisolariciresinol + NAD = H+ + (-)-lactol + NADH.","definition_xrefs":["EC:1.1.1.331","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(-)-secoisolariciresinol dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-8680"],"termid":"GO:0102911"}


id: PBO:0060271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 6","termid":"PBO:0060271"}


id: PBO:0001949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human hmmtag2 homolog","termid":"PBO:0001949"}


id: PBO:0054090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1443","termid":"PBO:0054090"}


id: PBO:0065560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTGES3L-AARSD1 readthrough","termid":"PBO:0065560"}


id: PBO:0048550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP dependent ribosome recycling factor mitochondrial 2","termid":"PBO:0048550"}


id: PBO:0002228
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.2.8","termid":"PBO:0002228"}


id: PBO:0074829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 25","termid":"PBO:0074829"}


id: PBO:0077150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 1","termid":"PBO:0077150"}


id: PBO:0112835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved nucleolar protein, human CCDC137 ortholog, implicated in rDNA metabolism or ribosome biogenesis","termid":"PBO:0112835"}


id: GO:0033958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of DNA and polynucleotides, releasing free hypoxanthine.","definition_xrefs":["EC:3.2.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798","GO:0140097"],"is_obsolete":false,"name":"DNA-deoxyinosine glycosylase activity","secondary_identifiers":["MetaCyc:3.2.2.15-RXN"],"synonyms":[{"name":"DNA(hypoxanthine) glycohydrolase activity","type":"related"},{"name":"DNA-deoxyinosine deoxyribohydrolase activity","type":"related"},{"name":"DNA-deoxyinosine glycosidase activity","type":"related"},{"name":"deoxyribonucleic acid glycosylase activity","type":"related"},{"name":"hypoxanthine-DNA glycosylase activity","type":"related"}],"termid":"GO:0033958"}


id: GO:0075046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of symbiont haustorium formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of formation of structure involved in a symbiotic process","termid":"GO:0044149"},{"relation_name":"is_a","term_name":"regulation of formation by symbiont of haustorium for nutrient acquisition from host","termid":"GO:0075045"},{"relation_name":"positively_regulates","term_name":"formation of haustorium for nutrient acquisition","termid":"GO:0052094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation by symbiont of haustorium for nutrient acquisition from host","termid":"GO:0075046"}


id: PBO:0077421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 160","termid":"PBO:0077421"}


id: GO:0030101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:mgi_curators","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell activation","synonyms":[{"name":"NK cell activation","type":"exact"}],"termid":"GO:0030101"}


id: GO:0052905
data:
  {"annotated_genes":["SJAG_04993"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95508],"is_not":false,"summary":null,"term":"GO:0052905"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine9 in tRNA + S-adenosyl-L-methionine = H+ + N1-methylguanosine9 in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:43156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04993":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016740","GO:0016741","GO:0140101","GO:0003824"],"is_obsolete":false,"name":"tRNA (guanosine(9)-N1)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6786621","Reactome:R-HSA-6787591","MetaCyc:RXN-12459","EC:2.1.1.221"],"synonyms":[{"name":"tRNA (guanine(9)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (guanine-N(1)-)-methyltransferase activity","type":"related"},{"name":"tRNA (guanosine(9)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(9)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA m(1)G(9) Mtase activity","type":"related"},{"name":"tRNA m(1)G(9)-methyltransferase activity","type":"related"},{"name":"tRNA(m(1)G(9)/m(1)A(9))-methyltransferase activity","type":"related"},{"name":"tRNA(m(1)G(9)/m(1)A(9))Mtase activity","type":"related"}],"termid":"GO:0052905","terms_by_termid":{"GO:0052905":null}}


id: PBO:0073755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC2A9 antisense RNA 1","termid":"PBO:0073755"}


id: GO:0033342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of collagen binding.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of collagen binding","termid":"GO:0033341"},{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collagen binding","synonyms":[{"name":"down regulation of collagen binding","type":"exact"},{"name":"down-regulation of collagen binding","type":"exact"},{"name":"downregulation of collagen binding","type":"exact"},{"name":"inhibition of collagen binding","type":"narrow"}],"termid":"GO:0033342"}


id: FYPO:0007225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which assembly of heterochromatin mediated by small RNA is normal (i.e. indistinguishable from wild type). Small RNA-mediated heterochromatin assembly results in transcriptional silencing.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing","termid":"FYPO:0002335"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal heterochromatin assembly by small RNA","synonyms":[{"name":"normal RNAi-mediated chromatin silencing","type":"exact"},{"name":"normal chromatin silencing by small RNA","type":"exact"},{"name":"normal heterochromatin assembly by small RNA during mitotic cell cycle","type":"related"},{"name":"normal heterochromatin assembly by small RNA during vegetative growth","type":"exact"}],"termid":"FYPO:0007225"}


id: GO:0012502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death","secondary_identifiers":["GO:0012503"],"synonyms":[{"name":"induction of non-apoptotic programmed cell death","type":"narrow"},{"name":"induction of nonapoptotic programmed cell death","type":"narrow"}],"termid":"GO:0012502"}


id: PBO:0071756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 3","termid":"PBO:0071756"}


id: PBO:0001166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly ADAM family peptidase Mde10","termid":"PBO:0001166"}


id: GO:0006862
data:
  {"annotated_genes":["SJAG_00760","SJAG_00154","SJAG_00612","SJAG_03503","SJAG_03452","SJAG_03334","SJAG_02050","SJAG_04328","SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[98957,106987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[106988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015867"},{"annotations":[61267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035350"},{"annotations":[111239,63283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[97456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[106989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[98958,106990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[86941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[103661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"},{"annotations":[88995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"},{"annotations":[61266,106991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901679"},{"annotations":[95399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"}]},"cv_name":"biological_process","definition":"The directed movement of a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_04325":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"nucleotide transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006862","terms_by_termid":{"GO:0015866":null,"GO:0015867":null,"GO:0035348":null,"GO:0035350":null,"GO:0140021":null,"GO:1901679":null,"GO:1903790":null,"GO:1990519":null,"GO:1990544":null,"GO:1990548":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null}}


id: FYPO:0007030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the levels and proportions of monosaccharides in the cell wall are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:30389790","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cell wall monosaccharide composition during vegetative growth","synonyms":[{"name":"normal cell wall monosaccharide composition during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007030"}


id: GO:0061576
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes the reaction acyl-CoA + sphingosine = CoA + N-acylsphingosine. In S. cerevisiae it contains three subunits: lag1, lac1 and lip1.","definition_xrefs":["GOC:dph","PMID:15692566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"acyl-CoA ceramide synthase complex","termid":"GO:0061576"}


id: PBO:0051218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 7-4-1","termid":"PBO:0051218"}


id: PBO:0086648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus and nucleus; predicted to be involved in ribosome biogenesis","termid":"PBO:0086648"}


id: PBO:0072920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 1","termid":"PBO:0072920"}


id: PBO:0042297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD6 molecule","termid":"PBO:0042297"}


id: PR:Q9C0Z3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slx9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Z3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein slx9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB21F2.03","synonyms":[{"name":"Spom972h-slx9","type":"exact"}],"termid":"PR:Q9C0Z3"}


id: PBO:0111439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex subunit Vtc4","termid":"PBO:0111439"}


id: PBO:0058173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4468","termid":"PBO:0058173"}


id: MOD:00519
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:151","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc2Pent1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)Pent(1)","type":"related"},{"name":"Hex1HexNAc2Pent1","type":"related"}],"termid":"MOD:00519"}


id: FYPO:0004132
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sulfite reductase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal sulfite reductase activity","synonyms":[{"name":"normal sulphite reductase activity","type":"exact"}],"termid":"FYPO:0004132"}


id: PBO:0028377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_xanthine_DNA_N-glycosylase_activity","termid":"PBO:0028377"}


id: GO:0034874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: thioacetamide S-oxide + O2 + 2 H+ + 2 e- = thioacetamide S,S-dioxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete thioacetamide S-oxide S-oxygenase activity (obsolete GO:0034874)","termid":"GO:0034874"}


id: PBO:0086940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase; GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear organization, RNA processing and transport; regulated by Srm1p, Rna1p, Yrb1p, Yrb2p, Yrp4p, Yrb30p, Cse1p and Kap95p; GSP1 has a paralog, GSP2, that arose from the whole genome duplication","termid":"PBO:0086940"}


id: PBO:0069120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 369, pseudogene","termid":"PBO:0069120"}


id: GO:0141192
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93120],"is_not":false,"summary":null,"term":"GO:0141192"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP + H+ = diphosphate + P(1),P(4)-bis(5'-adenosyl)tetraphosphate.","definition_xrefs":["PMID:16884494","PMID:19710017","PMID:27398309","RHEA:34935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"ATP:ATP adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenine triphosphate adenylyltransferase activity","type":"related"}],"termid":"GO:0141192","terms_by_termid":{"GO:0141192":null}}


id: PR:Q9C116
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1786.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1786.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1786.04","synonyms":[{"name":"Spom972h-SPAC1786.04","type":"exact"}],"termid":"PR:Q9C116"}


id: GO:0032564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dATP, deoxyadenosine triphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl deoxyribonucleotide binding","termid":"GO:0032558"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"dATP binding","termid":"GO:0032564"}


id: GO:1904719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of AMPA glutamate receptor clustering.","definition_xrefs":["GOC:hjd","GOC:TermGenie","GO_REF:0000058","PMID:21558424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of postsynaptic membrane organization","termid":"GO:1901628"},{"relation_name":"is_a","term_name":"positive regulation of receptor clustering","termid":"GO:1903911"},{"relation_name":"is_a","term_name":"regulation of AMPA glutamate receptor clustering","termid":"GO:1904717"},{"relation_name":"positively_regulates","term_name":"AMPA glutamate receptor clustering","termid":"GO:0097113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of AMPA glutamate receptor clustering","synonyms":[{"name":"activation of AMPA glutamate receptor clustering","type":"narrow"},{"name":"activation of AMPA receptor clustering","type":"narrow"},{"name":"activation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"narrow"},{"name":"positive regulation of AMPA receptor clustering","type":"exact"},{"name":"positive regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"up regulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"up regulation of AMPA receptor clustering","type":"exact"},{"name":"up regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"up-regulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"up-regulation of AMPA receptor clustering","type":"exact"},{"name":"up-regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"upregulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"upregulation of AMPA receptor clustering","type":"exact"},{"name":"upregulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"}],"termid":"GO:1904719"}


id: PBO:0079978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 16","termid":"PBO:0079978"}


id: PBO:0089611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex subunit C, Pcf3","termid":"PBO:0089611"}


id: PBO:0003600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Msl1 (predicted)","termid":"PBO:0003600"}


id: PBO:0047315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAST kinase domains 5","termid":"PBO:0047315"}


id: PBO:0058825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8055","termid":"PBO:0058825"}


id: PBO:0001035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human 4F5S homolog","termid":"PBO:0001035"}


id: GO:0043638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of puromycin, an aminonucleoside antibiotic that is a potent inhibitor of translation; produced by the bacterium Streptomyces alboniger.","definition_xrefs":["GOC:jl","Wikipedia:Puromycin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"puromycin metabolic process","termid":"GO:0043637"},{"relation_name":"is_a","term_name":"purine ribonucleoside biosynthetic process","termid":"GO:0046129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"puromycin biosynthetic process","termid":"GO:0043638"}


id: PBO:0082838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; required for ribosomal large subunit maturation; functionally redundant with Ssf2p; member of the Brix family; SSF1 has a paralog, SSF2, that arose from the whole genome duplication","termid":"PBO:0082838"}


id: PBO:0030142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_L-thialysine","termid":"PBO:0030142"}


id: PBO:0062895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXCT1 antisense RNA 1","termid":"PBO:0062895"}


id: PBO:0070923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 31","termid":"PBO:0070923"}


id: GO:0009512
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that transfers electrons from reduced plastoquinone to oxidized plastocyanin and translocates protons from the stroma to the lumen. The complex contains a core structure of three catalytic subunits: cytochrome b, the Rieske iron sulfur protein (ISP), and cytochrome f, which are arranged in an integral membrane-bound dimeric complex; additional subunits are present, and vary among different species.","definition_xrefs":["PMID:16228398","PMID:16352458","ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex","termid":"GO:0070069"},{"relation_name":"part_of","term_name":"thylakoid","termid":"GO:0009579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytochrome b6f complex","secondary_identifiers":["Wikipedia:Cytochrome_b6f_complex"],"synonyms":[{"name":"cyt b(6)f complex","type":"exact"},{"name":"cyt b6-f complex","type":"exact"},{"name":"cyt b6/f complex","type":"exact"},{"name":"cyt b6f complex","type":"exact"},{"name":"cytochrome b(6)f complex","type":"exact"},{"name":"cytochrome b6-f complex","type":"exact"},{"name":"cytochrome b6/f complex","type":"exact"}],"termid":"GO:0009512"}


id: FYPO:0002840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a specific location on a chromosome is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromosome during vegetative growth","synonyms":[{"name":"increased protein localisation to chromosome during vegetative growth","type":"exact"},{"name":"increased protein localization to chromosome during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002840"}


id: PBO:0087196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA m5C methyltransferase; methylates cytosine at position 2278 of 25S rRNA while Nop2p methylates cytosine at position 2870; contains seven beta-strand methyltransferase motif; localized to the nucleolus; interacts with Trm112p; homolog of NSUN5A, a human gene which is deleted in Williams-Beuren Syndrome","termid":"PBO:0087196"}


id: GO:0045743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040036"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"activation of fibroblast growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of FGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of FGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of FGFR signaling pathway","type":"exact"},{"name":"stimulation of fibroblast growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of fibroblast growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0045743"}


id: GO:0048623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a seed germinates before being shed from the parent plant.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seed germination","termid":"GO:0009845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed germination on parent plant","synonyms":[{"name":"non-vegetative vivipary","type":"broad"},{"name":"pre-harvest sprouting","type":"exact"},{"name":"vivipary","type":"broad"}],"termid":"GO:0048623"}


id: PBO:0085764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase of unknown cellular role; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0085764"}


id: GO:0004963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with follicle-stimulating hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"follicle-stimulating hormone receptor activity","synonyms":[{"name":"FSH receptor activity","type":"exact"},{"name":"follicle stimulating hormone receptor activity","type":"exact"}],"termid":"GO:0004963"}


id: PBO:0012003
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-consensus GAG acceptor","termid":"PBO:0012003"}


id: GO:0008378
data:
  {"annotated_genes":["SJAG_04095","SJAG_03871","SJAG_00183","SJAG_01972","SJAG_03149","SJAG_04401","SJAG_02996","SJAG_03790","SJAG_03150"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89251,94883,114115,94861,94882,95024,98818,94881,94863,94860,94862,89252,89249,94884,89250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031278"},{"annotations":[106806,94868,106812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001962"},{"annotations":[101849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_01972":null,"SJAG_02996":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04095":null,"SJAG_04401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1964501"],"termid":"GO:0008378","terms_by_termid":{"GO:0001962":null,"GO:0031278":null,"GO:0047220":null}}


id: GO:0015775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of beta-glucans into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Beta-glucans are compounds composed of glucose residues linked by beta-glucosidic bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide transport","termid":"GO:0015774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"beta-glucan transport","termid":"GO:0015775"}


id: PBO:0042012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 69","termid":"PBO:0042012"}


id: PBO:0079909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1","termid":"PBO:0079909"}


id: GO:0009421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proteinaceous structure at the distal tip of the bacterial-type flagellar filament.","definition_xrefs":["GOC:mtg_sensu","PMID:10572114","GOC:cilia","PMID:12624192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum filament","termid":"GO:0009420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum filament cap","synonyms":[{"name":"flagellar filament cap","type":"exact"},{"name":"flagellin-based flagellum filament cap","type":"exact"}],"termid":"GO:0009421"}


id: PBO:0044396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 56, pseudogene","termid":"PBO:0044396"}


id: FYPO:0006715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitosis phenotype observed in the vegetative growth phase of the life cycle in which the nucleus divides unequally to produce one daughter nucleus that is larger than the other.","definition_xrefs":["PomBase:jh","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002403","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"large and small daughter nuclei","synonyms":[{"name":"large and small daughter nuclei during mitotic cell cycle","type":"related"},{"name":"large and small daughter nuclei during vegetative growth","type":"exact"}],"termid":"FYPO:0006715"}


id: GO:0006631
data:
  {"annotated_genes":["SJAG_00734","SJAG_04107","SJAG_03972","SJAG_04570","SJAG_04913","SJAG_00947","SJAG_03909","SJAG_00221","SJAG_00099","SJAG_02717","SJAG_01356","SJAG_00902","SJAG_00305","SJAG_00706","SJAG_01946","SJAG_04972","SJAG_01396","SJAG_03553","SJAG_02763","SJAG_00102","SJAG_02007","SJAG_02788","SJAG_03471","SJAG_01300","SJAG_02885","SJAG_03198","SJAG_03526","SJAG_03130","SJAG_01458","SJAG_02769","SJAG_03943","SJAG_03313","SJAG_00630","SJAG_00413","SJAG_03180","SJAG_01238"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87903,89615,97323,97742,104807,111847],"is_not":false,"summary":null,"term":"GO:0006631"},{"annotations":[107929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[102616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[94465,91115,93794,94372,93430,84251,87543,108601,96841,98152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[87561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[101966,94307,107415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[88041,85625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[88042,85626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[88300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019395"},{"annotations":[93282,108786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[93795,96842,100421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[109861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"},{"annotations":[101683,104461,109518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001676"},{"annotations":[107354],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[93797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[110498,69266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[99578,85628,88045,101968,107416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"cellular lipid metabolic process","termid":"GO:0044255"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00099":null,"SJAG_00102":null,"SJAG_00221":null,"SJAG_00305":null,"SJAG_00413":null,"SJAG_00630":null,"SJAG_00706":null,"SJAG_00734":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_01238":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01396":null,"SJAG_01458":null,"SJAG_01946":null,"SJAG_02007":null,"SJAG_02717":null,"SJAG_02763":null,"SJAG_02769":null,"SJAG_02788":null,"SJAG_02885":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03313":null,"SJAG_03471":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03909":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04107":null,"SJAG_04570":null,"SJAG_04913":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Fatty_acid_metabolism"],"synonyms":[{"name":"fatty acid metabolism","type":"exact"}],"termid":"GO:0006631","terms_by_termid":{"GO:0001561":null,"GO:0001676":null,"GO:0006631":null,"GO:0006633":null,"GO:0006635":null,"GO:0006636":null,"GO:0009062":null,"GO:0009107":null,"GO:0019367":null,"GO:0019395":null,"GO:0030497":null,"GO:0034625":null,"GO:0042758":null,"GO:0042759":null,"GO:0042761":null,"GO:0045717":null,"GO:1900535":null}}


id: PR:O74402
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A chaperone protein ClpB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 78, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.17c","secondary_identifiers":["UniProtKB:O74402"],"synonyms":[{"name":"Spom972h-clpB","type":"exact"}],"termid":"PR:O74402"}


id: PBO:0076904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX101 pseudogene 1","termid":"PBO:0076904"}


id: PBO:0049896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase family member 6","termid":"PBO:0049896"}


id: GO:0045919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytolysis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytolysis","termid":"GO:0042268"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cytolysis","termid":"GO:0019835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytolysis","synonyms":[{"name":"activation of cytolysis","type":"narrow"},{"name":"stimulation of cytolysis","type":"narrow"},{"name":"up regulation of cytolysis","type":"exact"},{"name":"up-regulation of cytolysis","type":"exact"},{"name":"upregulation of cytolysis","type":"exact"}],"termid":"GO:0045919"}


id: PBO:0040589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain and CNC homolog 1","termid":"PBO:0040589"}


id: PBO:0067464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 591, pseudogene","termid":"PBO:0067464"}


id: GO:0034322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: decanoyl-CoA + an alcohol = CoA + a decyl ester.","definition_xrefs":["GOC:mah","PMID:16361250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"},{"relation_name":"is_a","term_name":"alcohol O-acyltransferase activity","termid":"GO:0034318"},{"relation_name":"is_a","term_name":"O-decanoyltransferase activity","termid":"GO:0034325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"alcohol O-decanoyltransferase activity","termid":"GO:0034322"}


id: GO:0002599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of lipid antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002593"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0002598"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"down regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"down-regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"downregulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"inhibition of antigen processing and presentation of lipid antigen via MHC class Ib","type":"narrow"},{"name":"negative regulation of lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002599"}


id: PBO:0003493
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focus formation at DNA damage sites, Swi5_dependent","termid":"PBO:0003493"}


