# terms

id: GO:0005741
data:
  {"annotated_genes":["SJAG_03415","SJAG_03328","SJAG_00428","SJAG_01212","SJAG_03435","SJAG_01880","SJAG_01134","SJAG_01312","SJAG_02641","SJAG_02265","SJAG_00031","SJAG_00812","SJAG_00699","SJAG_03464","SJAG_04370","SJAG_00999","SJAG_00368","SJAG_01116","SJAG_01305","SJAG_00605","SJAG_02361","SJAG_04203","SJAG_00569","SJAG_04907","SJAG_01357","SJAG_00265","SJAG_00754","SJAG_03345","SJAG_03358","SJAG_00048","SJAG_05268","SJAG_04759","SJAG_02848","SJAG_00235","SJAG_04732","SJAG_00880","SJAG_01260","SJAG_03416","SJAG_03710","SJAG_00655","SJAG_04270","SJAG_05259","SJAG_04996","SJAG_03502","SJAG_03515","SJAG_01780","SJAG_01951","SJAG_02355","SJAG_02543","SJAG_00948","SJAG_03175","SJAG_01929","SJAG_02084"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85170,85615,88005,88035,88244,91548,92202,92997,96623,96900,97438,97562,98861,100455,100695,100740,101884,102007,102067,103807,104974,105378,106702,107971,112398,113656,113752,114836],"is_not":false,"summary":null,"term":"GO:0005741"},{"annotations":[85368,111852,100898],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036266"},{"annotations":[111853,100899,100558,95356,102674,85371,98607,96622],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032473"},{"annotations":[87009,103618,103117,103747,112710,101926],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032865"},{"annotations":[103305],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031315"},{"annotations":[106500,107888],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140595"},{"annotations":[87004,102258,95635,95526,103665,103687],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005742"},{"annotations":[94686,87011,86487,106492],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001401"}]},"cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane","termid":"GO:0031966"},{"relation_name":"is_a","term_name":"organelle outer membrane","termid":"GO:0031968"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00048":null,"SJAG_00235":null,"SJAG_00265":null,"SJAG_00368":null,"SJAG_00428":null,"SJAG_00569":null,"SJAG_00605":null,"SJAG_00655":null,"SJAG_00699":null,"SJAG_00754":null,"SJAG_00812":null,"SJAG_00880":null,"SJAG_00948":null,"SJAG_00999":null,"SJAG_01116":null,"SJAG_01134":null,"SJAG_01212":null,"SJAG_01260":null,"SJAG_01305":null,"SJAG_01312":null,"SJAG_01357":null,"SJAG_01780":null,"SJAG_01880":null,"SJAG_01929":null,"SJAG_01951":null,"SJAG_02084":null,"SJAG_02265":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02543":null,"SJAG_02641":null,"SJAG_02848":null,"SJAG_03175":null,"SJAG_03328":null,"SJAG_03345":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03435":null,"SJAG_03464":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03710":null,"SJAG_04203":null,"SJAG_04270":null,"SJAG_04370":null,"SJAG_04732":null,"SJAG_04759":null,"SJAG_04907":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"mitochondrial outer membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Outer_mitochondrial_membrane","NIF_Subcellular:sao1289741256"],"synonyms":[{"name":"mitochondrion outer membrane","type":"exact"},{"name":"outer mitochondrial membrane","type":"exact"},{"name":"outer mitochondrion membrane","type":"exact"}],"termid":"GO:0005741","terms_by_termid":{"GO:0001401":null,"GO:0005741":null,"GO:0005742":null,"GO:0031315":null,"GO:0032473":null,"GO:0032865":null,"GO:0036266":null,"GO:0140595":null}}


id: PBO:0078843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 5-1","termid":"PBO:0078843"}


id: GO:0021820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the deposition of extracellular matrix signals in the marginal zone of the developing cerebral cortex. This extracellular matrix controls the movement of migrating cells. In mammals, the matrix is modified by Cajal-Retzius cells.","definition_xrefs":["GOC:dgh","PMID:12626695","GOC:jid","GO_REF:0000021","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"},{"relation_name":"part_of","term_name":"layer formation in cerebral cortex","termid":"GO:0021819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extracellular matrix organization in marginal zone involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"extracellular matrix organisation in marginal zone involved in cerebral cortex radial glia guided migration","type":"exact"},{"name":"organization of extracellular matrix in the marginal zone involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021820"}


id: GO:0141157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of  host exocytosis. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17185412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host vesicle-mediated transport","termid":"GO:1990215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host exocytosis","termid":"GO:0141157"}


id: GO:0100001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any action potential process that regulates skeletal muscle contraction.","definition_xrefs":["GOC:cjm","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"action potential","termid":"GO:0001508"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction by action potential","termid":"GO:0100001"}


id: GO:0120173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin filament bundle convergence involved in mitotic contractile ring assembly.","definition_xrefs":["PMID:24798735","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin filament bundle convergence involved in mitotic contractile ring assembly (obsolete GO:0120173)","termid":"GO:0120173"}


id: PBO:0069497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 764, pseudogene","termid":"PBO:0069497"}


id: GO:1990038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The periphery of a Lewy body. In Parkinson's disease, it contains spherical accumulations of filaments arranged in a loose, radiating array.","definition_xrefs":["NIF_Subcellular:sao5764355747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"Lewy body","termid":"GO:0097413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Lewy body corona","synonyms":[{"name":"halo","type":"broad"}],"termid":"GO:1990038"}


id: FYPO:0007082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the lengthening of the distance between poles of the meiotic spindle that occurs as part of the second meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"normal spindle elongation in meiosis II","synonyms":[{"name":"normal meiotic spindle elongation in meiosis II","type":"exact"},{"name":"normal meiotic spindle elongation in second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007082"}


id: GO:0015165
data:
  {"annotated_genes":["SJAG_04697","SJAG_00434","SJAG_04162","SJAG_01177"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84504,108472,111652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[108473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[101064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[101065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a pyrimidine nucleotide-sugar from one side of a membrane to the other. Pyrimidine nucleotide-sugars are pyrimidine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar transmembrane transporter activity","termid":"GO:0005338"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00434":null,"SJAG_01177":null,"SJAG_04162":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"pyrimidine nucleotide-sugar transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015165","terms_by_termid":{"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null}}


id: GO:0070732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle envelope that surrounds the chromosomes and the central part of the spindle apparatus during mitosis and meiosis; observed in many invertebrates. The spindle envelope consists of membrane layers, called parafusorial membranes, derived from endoplasmic reticulum membrane; in male meiosis it forms during prometaphase and persists until early in the ensuing interphase.","definition_xrefs":["GOC:sart","PMID:6428889","PMID:19417004","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope","termid":"GO:0031967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spindle envelope","termid":"GO:0070732"}


id: PBO:0028035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_equatorial_microtubule_organizing_center_assembly","termid":"PBO:0028035"}


id: PBO:0061939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily N member 2","termid":"PBO:0061939"}


id: GO:0090249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the controlled self-propelled movement of a cell that contributes to somitogenic axis elongation.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"cell migration involved in somitogenic axis elongation","termid":"GO:0090248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell migration involved in somitogenic axis elongation","synonyms":[{"name":"regulation of cell motility involved in somitogenic axis elongation","type":"broad"}],"termid":"GO:0090249"}


id: PBO:0057533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 649","termid":"PBO:0057533"}


id: PR:O74366
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIH subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12831:SF0","OMA:SCHPO02813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.07c","secondary_identifiers":["UniProtKB:O74366"],"synonyms":[{"name":"RNA polymerase II transcription factor B 34 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B p34 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GTF2H3","type":"exact"}],"termid":"PR:O74366"}


id: GO:0052505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the deposition of callose by the symbiont in its cell walls, occurring as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont cell wall callose deposition (obsolete GO:0052505)","synonyms":[{"name":"induction by organism of defense-related symbiont cell wall callose deposition","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont cell wall callose deposition","type":"exact"}],"termid":"GO:0052505"}


id: PBO:0071871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 9","termid":"PBO:0071871"}


id: PR:P41838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rae1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A)+ RNA export protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.05c","synonyms":[{"name":"Spom972h-rae1","type":"exact"}],"termid":"PR:P41838"}


id: PBO:0004932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component II (predicted)","termid":"PBO:0004932"}


id: PBO:0055681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase family member J","termid":"PBO:0055681"}


id: GO:0120021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes oxysterol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:24220498","PMID:20823909","GOC:krc","PMID:25797198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transfer activity","termid":"GO:0120015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0120013","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"oxysterol transfer activity","synonyms":[{"name":"intermembrane oxysterol transfer activity","type":"narrow"},{"name":"oxysterol carrier activity","type":"exact"}],"termid":"GO:0120021"}


id: GO:0010763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of fibroblast cell migration. Fibroblast cell migration is accomplished by extension and retraction of a pseudopodium.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast migration","termid":"GO:0010762"},{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"positively_regulates","term_name":"fibroblast migration","termid":"GO:0010761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast migration","synonyms":[{"name":"positive regulation of fibroblast cell migration","type":"exact"}],"termid":"GO:0010763"}


id: PR:Q9USS6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysophosphatidic acid phosphatase type 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase SPBC4.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.06","secondary_identifiers":["UniProtKB:Q9USS6"],"synonyms":[{"name":"Spom972h-ACP6","type":"exact"}],"termid":"PR:Q9USS6"}


id: GO:0000930
data:
  {"annotated_genes":["SJAG_03835","SJAG_01215","SJAG_00856","SJAG_07018","SJAG_02609","SJAG_02886","SJAG_01756","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102524,104933,96178,105698,93753,113267,106671,97081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000931"},{"annotations":[104934,105699,97082,106672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008275"}]},"cv_name":"cellular_component","definition":"A multiprotein complex composed of gamma-tubulin and other non-tubulin proteins. Gamma-tubulin complexes are localized to microtubule organizing centers, and play an important role in the nucleation of microtubules. The number and complexity of non-tubulin proteins associated with these complexes varies between species.","definition_xrefs":["GOC:clt","PMID:12134075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02431":null,"SJAG_02609":null,"SJAG_02886":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"gamma-tubulin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000930","terms_by_termid":{"GO:0000931":null,"GO:0008275":null}}


id: PBO:0059886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 9","termid":"PBO:0059886"}


id: PBO:0113531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane cation-chloride cotransporter (CCC); involved in potassium homeostasis and salt tolerance; localizes to sites of contact between vacuole and mitochondria (vCLAMPs); targeted to vacuole via AP-3 pathway; similar to mammalian electroneutral Na(+)-(K+)-C1- cotransporter family","termid":"PBO:0113531"}


id: GO:0003218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a left cardiac ventricle from unspecified parts.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac ventricle formation","termid":"GO:0003211"},{"relation_name":"part_of","term_name":"cardiac left ventricle morphogenesis","termid":"GO:0003214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac left ventricle formation","termid":"GO:0003218"}


id: FYPO:0003845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype in which protein localization to the prospore membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to prospore membrane","synonyms":[{"name":"normal protein localisation to prospore membrane","type":"exact"},{"name":"normal protein localization to forespore membrane","type":"exact"}],"termid":"FYPO:0003845"}


id: PBO:0056368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6 pseudogene 5","termid":"PBO:0056368"}


id: GO:1902942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated chloride channel activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:22006324","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of anion channel activity","termid":"GO:0010360"},{"relation_name":"is_a","term_name":"regulation of voltage-gated chloride channel activity","termid":"GO:1902941"},{"relation_name":"is_a","term_name":"negative regulation of inorganic anion transmembrane transport","termid":"GO:1903796"},{"relation_name":"is_a","term_name":"negative regulation of chloride transport","termid":"GO:2001226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of voltage-gated chloride channel activity","synonyms":[{"name":"down regulation of voltage gated chloride channel activity","type":"exact"},{"name":"down regulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"down regulation of voltage-gated chloride channel activity","type":"exact"},{"name":"down-regulation of voltage gated chloride channel activity","type":"exact"},{"name":"down-regulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"down-regulation of voltage-gated chloride channel activity","type":"exact"},{"name":"downregulation of voltage gated chloride channel activity","type":"exact"},{"name":"downregulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"downregulation of voltage-gated chloride channel activity","type":"exact"},{"name":"inhibition of voltage gated chloride channel activity","type":"narrow"},{"name":"inhibition of voltage-dependent chloride channel activity","type":"narrow"},{"name":"inhibition of voltage-gated chloride channel activity","type":"narrow"},{"name":"negative regulation of voltage gated chloride channel activity","type":"exact"},{"name":"negative regulation of voltage-dependent chloride channel activity","type":"exact"}],"termid":"GO:1902942"}


id: GO:0048003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses lipid antigen in association with an MHC class Ib protein complex on its cell surface, including lipid extraction, degradation, and transport steps for the lipid antigen both prior to and following assembly with the MHC protein complex. The lipid antigen may originate from an endogenous or exogenous source of lipid. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family.","definition_xrefs":["PMID:10375559","PMID:15928678","PMID:15928680","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"antigen presentation, lipid antigen","type":"exact"},{"name":"lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0048003"}


id: FYPO:0000745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch internalization begins later than normal. Actin cortical patch internalization is the process in which the patch moves from the cell surface to the inside of the cell.","definition_xrefs":["PMID:21620704","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch internalization","termid":"FYPO:0000743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0004803","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of actin cortical patch internalization","synonyms":[{"name":"delayed actin cortical patch internalization","type":"exact"},{"name":"delayed onset of F-actin patch internalization","type":"exact"},{"name":"delayed onset of abnormal actin cortical patch internalization during vegetative growth","type":"exact"},{"name":"delayed onset of actin cortical patch internalisation","type":"exact"},{"name":"delayed onset of actin cortical patch internalization during mitotic cell cycle","type":"related"},{"name":"delayed onset of actin patch internalization","type":"exact"}],"termid":"FYPO:0000745"}


id: GO:0097001
data:
  {"annotated_genes":["SJAG_03690"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113594],"is_not":false,"summary":null,"term":"GO:0097001"}]},"cv_name":"molecular_function","definition":"Binding to a ceramide, a class of lipids composed of sphingosine linked to a fatty acid. Ceramides are a major component of cell membranes.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"sphingolipid binding","termid":"GO:0046625"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03690":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"ceramide binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097001","terms_by_termid":{"GO:0097001":null}}


id: GO:0004620
data:
  {"annotated_genes":["SJAG_01519","SJAG_02091","SJAG_04110","SJAG_01198","SJAG_03204","SJAG_00199","SJAG_01219","SJAG_02093","SJAG_02100","SJAG_02161","SJAG_00321","SJAG_04292","SJAG_04323"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88662,109951],"is_not":false,"summary":null,"term":"GO:0004620"},{"annotations":[104914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052712"},{"annotations":[113066,96918,87989,110849,86239,87981,99079,110159,90026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004622"},{"annotations":[104915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"},{"annotations":[92041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070290"},{"annotations":[93880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034479"},{"annotations":[89481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004435"},{"annotations":[99080,86240,96919,110850,87982,95849,87990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004623"},{"annotations":[92043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004630"},{"annotations":[104916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004767"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a glycerophospholipid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_00321":null,"SJAG_01198":null,"SJAG_01219":null,"SJAG_01519":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_03204":null,"SJAG_04110":null,"SJAG_04292":null,"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phospholipase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6792445","Reactome:R-HSA-6786650"],"termid":"GO:0004620","terms_by_termid":{"GO:0004435":null,"GO:0004620":null,"GO:0004622":null,"GO:0004623":null,"GO:0004630":null,"GO:0004767":null,"GO:0034479":null,"GO:0052712":null,"GO:0052714":null,"GO:0070290":null}}


id: GO:0035657
data:
  {"annotated_genes":["SJAG_04890","SJAG_03949"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92323,92587],"is_not":false,"summary":null,"term":"GO:0035657"}]},"cv_name":"cellular_component","definition":"A protein complex required for the methylation of a glutamine (Gln) residue in the protein release factor eRF1. In S. cerevisiae, this complex consists of at least Trm112p and Mtq2p.","definition_xrefs":["PMID:17008308","PMID:20400505","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03949":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"eRF1 methyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eRF1 MTase complex","type":"exact"}],"termid":"GO:0035657","terms_by_termid":{"GO:0035657":null}}


id: PBO:0075747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 72 pseudogene 2","termid":"PBO:0075747"}


id: FYPO:0005535
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 in telomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H4-K16 acetylation at telomere during vegetative growth","synonyms":[{"name":"increased histone H4-K16 acetylation at telomere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005535"}


id: GO:0106425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopa + O2 + H2O + H+ = 3,4-dihydroxyphenylacetaldehyde + CO2 + NH(4)+ + H2O2.","definition_xrefs":["PMID:21283636","RHEA:55524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"3,4-dihydroxyphenylacetaldehyde synthase activity","secondary_identifiers":["EC:4.1.1.107"],"synonyms":[{"name":"DHPAA synthase","type":"exact"}],"termid":"GO:0106425"}


id: GO:0034660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving non-coding RNA transcripts (ncRNAs).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA metabolic process (obsolete GO:0034660)","synonyms":[{"name":"ncRNA metabolism","type":"exact"}],"termid":"GO:0034660"}


id: PBO:0058743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6867","termid":"PBO:0058743"}


id: FYPO:0003781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the nuclear envelope is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear envelope morphology","termid":"FYPO:0003751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal nuclear envelope morphology during mitotic interphase","synonyms":[{"name":"normal nuclear envelope morphology during interphase during vegetative growth","type":"exact"},{"name":"normal nuclear envelope morphology during interphase of mitotic cell cycle","type":"exact"},{"name":"normal nuclear membrane morphology during mitotic interphase","type":"narrow"}],"termid":"FYPO:0003781"}


id: GO:0016884
data:
  {"annotated_genes":["SJAG_01577","SJAG_03355","SJAG_04549","SJAG_04634","SJAG_05560","SJAG_00392","SJAG_02832","SJAG_02618","SJAG_00964","SJAG_02721","SJAG_00412"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106890,98267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004066"},{"annotations":[89521,107174,102609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004088"},{"annotations":[107385,114467,92773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050567"},{"annotations":[89524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003922"},{"annotations":[97295],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0003921"},{"annotations":[113385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003952"},{"annotations":[95672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004642"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of the amide nitrogen of glutamine to a substrate. Usually composed of two subunits or domains, one that first hydrolyzes glutamine, and then transfers the resulting ammonia to the second subunit (or domain), where it acts as a source of nitrogen.","definition_xrefs":["PMID:12360532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00964":null,"SJAG_01577":null,"SJAG_02618":null,"SJAG_02721":null,"SJAG_02832":null,"SJAG_03355":null,"SJAG_04549":null,"SJAG_04634":null,"SJAG_05560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016003","EC:6.3.5.-"],"termid":"GO:0016884","terms_by_termid":{"GO:0003921":null,"GO:0003922":null,"GO:0003952":null,"GO:0004066":null,"GO:0004088":null,"GO:0004642":null,"GO:0050567":null}}


id: GO:2001214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vasculogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of vasculogenesis","termid":"GO:2001212"},{"relation_name":"positively_regulates","term_name":"vasculogenesis","termid":"GO:0001570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vasculogenesis","synonyms":[{"name":"positive regulation of vascular morphogenesis","type":"exact"}],"termid":"GO:2001214"}


id: PBO:0045365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPH1 antisense RNA 1","termid":"PBO:0045365"}


id: PBO:0052063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 5","termid":"PBO:0052063"}


id: GO:0034410
data:
  {"annotated_genes":["SJAG_00610","SJAG_04668","SJAG_00218","SJAG_01290","SJAG_00876","SJAG_01453","SJAG_03705","SJAG_02222","SJAG_01835","SJAG_04771","SJAG_05285","SJAG_04483","SJAG_04666","SJAG_01787","SJAG_03123","SJAG_03587","SJAG_04462","SJAG_01288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[84204,111909,102186,87694,103876,87684,105399,109267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[104708,98741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[83651,88516],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[88501,113977,88518,86883,101426,98949],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall beta-glucan metabolic process","termid":"GO:0034406"},{"relation_name":"is_a","term_name":"beta-glucan biosynthetic process","termid":"GO:0051274"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall beta-glucan anabolism","type":"exact"},{"name":"cell wall beta-glucan biosynthesis","type":"exact"},{"name":"cell wall beta-glucan formation","type":"exact"},{"name":"cell wall beta-glucan synthesis","type":"exact"}],"termid":"GO:0034410","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: MOD:01653
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 5-dimethylaminonaphthalene-1-sulfonyl chloride, dansyl chloride.","definition_xrefs":["Unimod:139","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dansyl chloride derivatized residue","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"},{"name":"Dansyl (Dns)","type":"exact"},{"name":"DansylRes","type":"exact"}],"termid":"MOD:01653"}


id: GO:0006973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accumulation of glycerol within a cell, for example by increased glycerol biosynthesis combined with decreased permeability of the cell membrane to glycerol, in response to the detection of a hyperosmotic environment.","definition_xrefs":["GOC:jl","PMID:11752666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"},{"relation_name":"part_of","term_name":"cellular hyperosmotic response","termid":"GO:0071474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular accumulation of glycerol","termid":"GO:0006973"}


id: GO:1901340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of store-operated calcium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium channel activity","termid":"GO:1901339"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of store-operated calcium channel activity","synonyms":[{"name":"down regulation of store-operated calcium channel activity","type":"exact"},{"name":"down-regulation of store-operated calcium channel activity","type":"exact"},{"name":"downregulation of store-operated calcium channel activity","type":"exact"},{"name":"inhibition of store-operated calcium channel activity","type":"narrow"}],"termid":"GO:1901340"}


id: GO:0034341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon.","definition_xrefs":["PMID:15546383","GOC:add","ISBN:0126896631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"},{"relation_name":"part_of","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to type II interferon","synonyms":[{"name":"response to gamma-interferon","type":"related"},{"name":"response to immune interferon","type":"exact"},{"name":"response to interferon-gamma","type":"broad"},{"name":"response to type II IFN","type":"broad"}],"termid":"GO:0034341"}


id: PR:O14035
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized permease C29B12.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.14c","synonyms":[{"name":"Spom972h-SPAC29B12.14c","type":"exact"}],"termid":"PR:O14035"}


id: PBO:0040018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 7","termid":"PBO:0040018"}


id: PBO:0040070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin beta 1","termid":"PBO:0040070"}


id: PBO:0086009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cytosol; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0086009"}


id: PBO:0047973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1","termid":"PBO:0047973"}


id: PBO:0091751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell surface protein, Kre9/Knh1 family, Knh4","termid":"PBO:0091751"}


id: GO:0052705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + N-alpha-methyl-L-histidine = S-adenosyl-L-homocysteine + N-alpha,N-alpha-dimethyl-L-histidine.","definition_xrefs":["EC:2.1.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"methylhistidine N-methyltransferase activity","synonyms":[{"name":"S-adenosyl-L-methionine:N-alpha-dimethyl-L-histidine N-alpha-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:alpha-N-dimethyl-L-histidine alpha-N-methyltransferase activity","type":"related"},{"name":"histidine-alpha-N-methyltransferase activity","type":"broad"},{"name":"methylhistidine methyltransferase activity","type":"related"}],"termid":"GO:0052705"}


id: PBO:0062441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 105 pseudogene","termid":"PBO:0062441"}


id: PBO:0052428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIT ligand","termid":"PBO:0052428"}


id: GO:0000178
data:
  {"annotated_genes":["SJAG_04153","SJAG_04006","SJAG_02991","SJAG_01431","SJAG_01818","SJAG_01191","SJAG_00854","SJAG_03745","SJAG_04084","SJAG_03179","SJAG_04321","SJAG_04824","SJAG_01521","SJAG_04818"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88330,89159,92016,93353,98175,100490,101334,102541,103541,111522,111969,114358],"is_not":false,"summary":null,"term":"GO:0000178"},{"annotations":[114356,101332,89158,100488,98173,92014,93351,111967,102539,103540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000177"},{"annotations":[95051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045025"},{"annotations":[103542,114359,100491,111523,98176,93354,111970,102542,89160,88332,92017,97135,101335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000176"}]},"cv_name":"cellular_component","definition":"A ribonuclease complex that has 3-prime to 5-prime exoribonuclease activity and possibly endoribonuclease activity, producing 5-prime-phosphomonoesters. Participates in a multitude of cellular RNA processing and degradation events preventing nuclear export and/or translation of aberrant RNAs. Restricted to processing linear and circular single-stranded RNAs (ssRNA) only. RNAs with complex secondary structures may have to be unwound or pre-processed by co-factors prior to entering the complex, esp if the 3-prime end is structured.","definition_xrefs":["PMID:17174896","PMID:26726035","PMID:20531386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exoribonuclease complex","termid":"GO:1905354"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_02991":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"exosome (RNase complex)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"exosome (ribonucleasease complex)","type":"exact"},{"name":"exosome multienzyme ribonuclease complex","type":"exact"}],"termid":"GO:0000178","terms_by_termid":{"GO:0000176":null,"GO:0000177":null,"GO:0000178":null,"GO:0045025":null}}


id: GO:0035848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the oviduct are generated and organized. An oviduct is a tube through which an ova passes from the ovary to the uterus, or from the ovary to the outside of the organism.","definition_xrefs":["GOC:yaf","PMID:22918811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"oviduct development","termid":"GO:0060066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oviduct morphogenesis","synonyms":[{"name":"fallopian tube morphogenesis","type":"narrow"}],"termid":"GO:0035848"}


id: PBO:0111424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo3","termid":"PBO:0111424"}


id: PBO:0071803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reprimo, TP53 dependent G2 arrest mediator homolog","termid":"PBO:0071803"}


id: PR:O74457
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-alpha-acetyltransferase 20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04414","PANTHER:PTHR23091:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal acetyltransferase B complex catalytic subunit naa20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.12","secondary_identifiers":["UniProtKB:O74457"],"synonyms":[{"name":"NatB Nalpha terminal acetyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NatB complex subunit naa20 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NAA20","type":"exact"}],"termid":"PR:O74457"}


id: PR:P79015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3202 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L32-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.10","synonyms":[{"name":"Spom972h-rpl3202","type":"exact"}],"termid":"PR:P79015"}


id: PBO:0065133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein activator of interferon induced protein kinase EIF2AK2","termid":"PBO:0065133"}


id: PBO:0005324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane ATPase Msp1 (predicted)","termid":"PBO:0005324"}


id: GO:0070093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of glucagon.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucagon secretion","termid":"GO:0070092"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"glucagon secretion","termid":"GO:0070091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of glucagon secretion","synonyms":[{"name":"down regulation of glucagon secretion","type":"exact"},{"name":"down-regulation of glucagon secretion","type":"exact"},{"name":"downregulation of glucagon secretion","type":"exact"},{"name":"inhibition of glucagon secretion","type":"narrow"}],"termid":"GO:0070093"}


id: PBO:0044392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 9","termid":"PBO:0044392"}


id: PBO:0040891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 1A","termid":"PBO:0040891"}


id: GO:0050331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + thiamin diphosphate = ADP + thiamin triphosphate.","definition_xrefs":["EC:2.7.4.15","MetaCyc:THIAMIN-DIPHOSPHATE-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"thiamine-diphosphate kinase activity","secondary_identifiers":["Reactome:R-HSA-997381","RHEA:11240"],"synonyms":[{"name":"ATP:thiamin-diphosphate phosphotransferase activity","type":"related"},{"name":"ATP:thiamine-diphosphate phosphotransferase activity","type":"related"},{"name":"TDP kinase activity","type":"related"},{"name":"protein bound thiamin diphosphate:ATP phosphoryltransferase activity","type":"related"},{"name":"thiamin diphosphate kinase activity","type":"exact"},{"name":"thiamin diphosphate phosphotransferase activity","type":"related"},{"name":"thiamin pyrophosphate kinase activity","type":"related"},{"name":"thiamin-diphosphate kinase activity","type":"exact"},{"name":"thiamine diphosphate kinase activity","type":"related"}],"termid":"GO:0050331"}


id: GO:0045106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Disassembly of intermediate filaments by the removal of component monomers from a filament.","definition_xrefs":["GOC:mah","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament polymerization or depolymerization","termid":"GO:0045105"},{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"intermediate filament depolymerization","termid":"GO:0045106"}


id: PBO:0109828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone, AAA family ATPase Rvb1","termid":"PBO:0109828"}


id: GO:0102833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1D-5-O-methyl-myo-inositol + alpha-D-galactosyl-(1->3)-1D-myo-inositol = D-galactosylononitol + myo-inositol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sequoyitol galactinol:D-galactosylononitol galactosyltransferase activity (obsolete GO:0102833)","termid":"GO:0102833"}


id: PBO:0071523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 26","termid":"PBO:0071523"}


id: PBO:0082179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor GTPase activating protein (ARF GAP); involved in ER-Golgi transport; shares functional similarity with Gcs1p","termid":"PBO:0082179"}


id: FYPO:0005009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:22976295"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein serine phosphorylation at RxxS site during vegetative growth (obsolete FYPO:0005009)","synonyms":[{"name":"decreased protein serine phosphorylation at Arg-X-X-Ser site during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation at PAS site during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation at RxxS site during mitotic cell cycle","type":"related"},{"name":"decreased protein serine phosphorylation at arginine-X-X-serine site during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation at phospho-Akt site during vegetative growth","type":"exact"},{"name":"reduced protein serine phosphorylation at RxxS site during vegetative growth","type":"exact"}],"termid":"FYPO:0005009"}


id: GO:0090272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor production","termid":"GO:0090270"},{"relation_name":"negatively_regulates","term_name":"fibroblast growth factor production","termid":"GO:0090269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of fibroblast growth factor production","termid":"GO:0090272"}


id: PBO:0038447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine and arginine rich domain containing protein","termid":"PBO:0038447"}


id: GO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol 1,2,3,4,5,6-hexakisphosphate = ADP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate.","definition_xrefs":["MetaCyc:2.7.1.152-RXN","RHEA:12793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"inositol hexakisphosphate 5-kinase activity","secondary_identifiers":["EC:2.7.4.21","KEGG_REACTION:R09087"],"synonyms":[{"name":"ATP:1D-myo-inositol-hexakisphosphate 5-phosphotransferase activity","type":"exact"}],"termid":"GO:0000832"}


id: FYPO:0001448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"altered cellular trehalose level","termid":"FYPO:0001446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"trehalose absent from cell during heat shock","synonyms":[{"name":"absent trehalose","type":"exact"},{"name":"trehalose absent from cell during heat shock during mitotic cell cycle","type":"related"},{"name":"trehalose absent from cell during vegetative growth and during heat shock","type":"exact"}],"termid":"FYPO:0001448"}


id: PBO:0079224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC3 antisense RNA 1","termid":"PBO:0079224"}


id: PBO:0087041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L1A; N-terminally acetylated; homologous to mammalian ribosomal protein L10A and bacterial L1; RPL1A has a paralog, RPL1B, that arose from the whole genome duplication; rpl1a rpl1b double null mutation is lethal; ribosomes containing Rpl1b are more efficient in translation of respiration-related proteins","termid":"PBO:0087041"}


id: GO:0060425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the lung are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung morphogenesis","termid":"GO:0060425"}


id: PBO:0017445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-produced_by","termid":"PBO:0017445"}


id: PBO:0080046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 19","termid":"PBO:0080046"}


id: PBO:0075779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 5","termid":"PBO:0075779"}


id: PBO:0053289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing 2","termid":"PBO:0053289"}


id: PATO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being a quadrilateral with two parallel sides.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quadrangular","termid":"PATO:0001988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trapezoid","synonyms":[{"name":"trapezoidal","type":"exact"}],"termid":"PATO:0002044"}


id: PR:O14216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication regulator sld2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:11937031","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication regulator sld2","termid":"PR:000027523"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication regulator sld2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.11","secondary_identifiers":["PR:000027524","UniProtKB:O14216"],"synonyms":[{"name":"DNA replication regulator drc1","type":"exact"},{"name":"SPAC6B12.11","type":"related"},{"name":"Spom972h-SLD2","type":"exact"}],"termid":"PR:O14216"}


id: GO:0060895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that contributes to the dorsal ventral patterning of the spinal cord.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in spinal cord dorsal/ventral patterning (obsolete GO:0060895)","synonyms":[{"name":"retinoic acid receptor signalling pathway involved in spinal cord dorsal/ventral patterning","type":"exact"}],"termid":"GO:0060895"}


id: PBO:0055914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A2","termid":"PBO:0055914"}


id: GO:0033183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of a ubiquitin group to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone ubiquitination (obsolete GO:0033183)","termid":"GO:0033183"}


id: PATO:0000841
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000841 relative auditory acuity value (obsolete PATO:0000841)","termid":"PATO:0000841"}


id: GO:1905930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular smooth muscle cell differentiation involved in phenotypic switching.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:25089138","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905063"},{"relation_name":"is_a","term_name":"regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905915"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell differentiation involved in phenotypic switching","termid":"GO:1905420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","synonyms":[{"name":"regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905930"}


id: GO:2001220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of G2 phase of mitotic cell cycle.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G2 phase of mitotic cell cycle (obsolete GO:2001220)","synonyms":[{"name":"negative regulation of G2 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:2001220"}


id: PBO:0039040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 2","termid":"PBO:0039040"}


id: GO:0005544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phospholipid, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"calcium-dependent phospholipid binding","termid":"GO:0005544"}


id: PBO:0061498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding repressor of NFAT","termid":"PBO:0061498"}


id: GO:1990085
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in inactivating the function of DnaA and thereby preventing multiple events of replication initiation. In E. coli, this complex is composed of the beta clamp (DnaN) and Hda.","definition_xrefs":["GOC:bhm","PMID:15150238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication inhibiting complex","termid":"GO:1990078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"Hda-beta clamp complex","synonyms":[{"name":"Hda-DnaN complex","type":"exact"},{"name":"Hda-dpo3b complex","type":"exact"}],"termid":"GO:1990085"}


id: PATO:0000047
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biological sex","termid":"PATO:0000047"}


id: PBO:0029578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_reactive_oxygen_species_level_in_stationary_phase","termid":"PBO:0029578"}


id: GO:0033897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a ribonucleotidyl-ribonucleotide-RNA + H2O = a 3'-end 3'-phospho-ribonucleotide-RNA + a 5'-end dephospho-ribonucleoside-RNA + H+. This reaction is a two-stage endonucleolytic cleavage to nucleoside 3'-phosphates and 3'-phosphooligonucleotides with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.19","RHEA:68052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788","GO:0140098","GO:0016829"],"is_obsolete":false,"name":"ribonuclease T2 activity","secondary_identifiers":["MetaCyc:3.1.27.5-RXN"],"synonyms":[{"name":"RNase II activity","type":"broad"},{"name":"RNase M activity","type":"related"},{"name":"RNase Ms activity","type":"exact"},{"name":"Escherichia coli ribonuclease I' ribonuclease PP2 activity","type":"exact"},{"name":"Escherichia coli ribonuclease II activity","type":"related"},{"name":"RNAase CL activity","type":"exact"},{"name":"RNase (non-base specific) activity","type":"exact"},{"name":"RNase T2 activity","type":"related"},{"name":"acid RNase activity","type":"exact"},{"name":"acid ribonuclease activity","type":"exact"},{"name":"base-non-specific ribonuclease activity","type":"exact"},{"name":"non-base specific ribonuclease activity","type":"exact"},{"name":"nonbase-specific RNase activity","type":"exact"},{"name":"nonspecific RNase activity","type":"exact"},{"name":"ribonnuclease (non-base specific) activity","type":"exact"},{"name":"ribonuclease (non-base specific) activity","type":"related"},{"name":"ribonuclease II activity","type":"broad"},{"name":"ribonuclease M activity","type":"exact"},{"name":"ribonuclease N2 activity","type":"exact"},{"name":"ribonuclease PP3 activity","type":"related"},{"name":"ribonuclease U4 activity","type":"exact"},{"name":"ribonucleate 3'-oligonucleotide hydrolase activity","type":"exact"},{"name":"ribonucleate nucleotido-2'-transferase (cyclizing) activity","type":"broad"}],"termid":"GO:0033897"}


id: PBO:0017938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase involved in very long-chain fatty acid elongation Phs1 (predicted)","termid":"PBO:0017938"}


id: FYPO:0002944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal when the cell is in G0 phase. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during G0","termid":"FYPO:0003864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during G0","synonyms":[{"name":"decreased RNA accumulation during G0","type":"related"},{"name":"decreased RNA level during cell quiescence","type":"exact"},{"name":"decreased RNA level during quiescence","type":"exact"},{"name":"decreased transcript level during G0","type":"exact"},{"name":"reduced RNA level during G0","type":"exact"}],"termid":"FYPO:0002944"}


id: PBO:0110825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, sexual differentiation inducing Esc1","termid":"PBO:0110825"}


id: PBO:0056870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICALL2 divergent transcript","termid":"PBO:0056870"}


id: PBO:0074748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 107","termid":"PBO:0074748"}


id: FYPO:0001144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Man8GlcNAc2 measured in a cell is lower than normal. Man8GlcNAc2 is any N-glycan that consists of a branched ten-membered mannooligosaccharide containing eight D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["CHEBI:64048","PomBase:mah","CHEBI:64052","PMID:12686557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased polysaccharide level during vegetative growth","termid":"FYPO:0001080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased Man8GlcNAc level","synonyms":[{"name":"decreased Man8GlcNAc accumulation","type":"related"},{"name":"decreased Man8GlcNAc level during mitotic cell cycle","type":"related"},{"name":"decreased Man8GlcNAc level during vegetative growth","type":"exact"},{"name":"decreased Man8GlcNAc2 level","type":"exact"},{"name":"decreased cellular Man8GlcNAc level","type":"exact"},{"name":"reduced Man8GlcNAc level","type":"exact"}],"termid":"FYPO:0001144"}


id: PBO:0045927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain family member B","termid":"PBO:0045927"}


id: FYPO:0006218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to potassium ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to potassium ion starvation","synonyms":[{"name":"decreased growth during cellular response to potassium ion starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to potassium ion starvation","type":"exact"},{"name":"hypersensitive to potassium ion starvation","type":"exact"},{"name":"reduced growth in low potassium","type":"related"},{"name":"sensitive to potassium ion depletion","type":"exact"},{"name":"sensitive to potassium ion deprivation","type":"exact"},{"name":"sensitive to potassium ion starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to potassium ion starvation during vegetative growth","type":"exact"},{"name":"sensitive to potassium starvation","type":"exact"}],"termid":"FYPO:0006218"}


id: GO:1990223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the cytokinin levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24124900"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of cytokinin levels in host (obsolete GO:1990223)","termid":"GO:1990223"}


id: PBO:0006210
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ortholog_qualifier","termid":"PBO:0006210"}


id: PBO:0057146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR223 host gene","termid":"PBO:0057146"}


id: PBO:0042138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 2","termid":"PBO:0042138"}


id: PBO:0077226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 3","termid":"PBO:0077226"}


id: GO:0044132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of a symbiont from an initial condition to a later condition, within the cells or tissues of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont on or near host (obsolete GO:0044132)","termid":"GO:0044132"}


id: PBO:0045057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLEU7 antisense RNA 1","termid":"PBO:0045057"}


id: GO:0016352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete insecticide susceptibility/resistance (obsolete GO:0016352)","synonyms":[{"name":"insecticide susceptibility/resistance","type":"exact"}],"termid":"GO:0016352"}


id: GO:0046921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->6) linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"alpha-(1->6)-fucosyltransferase activity","synonyms":[{"name":"alpha(1,6)-fucosyltransferase activity","type":"exact"},{"name":"alpha-(1,6)-fucosyltransferase activity","type":"exact"},{"name":"alpha-1,6-fucosyltransferase activity","type":"exact"}],"termid":"GO:0046921"}


id: GO:1990791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a dorsal root ganglion over time, from its formation to the mature structure.","definition_xrefs":["PMID:18583150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion development","termid":"GO:0061548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal root ganglion development","synonyms":[{"name":"DRG development","type":"exact"}],"termid":"GO:1990791"}


id: PBO:0083651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endocytic site protein required for stress-induced cell elongation; may link the polarization signal with the endocytic machinery to facilitate adaptive morphogenesis under conditions of stress; interacts with the polarity regulator Cdc42p, the SH3 domains of actin patch components and actin filaments; contains a Rho-GAP domain lacking the catalytic arginine finger, PXXP motifs and an xACT (F-actin binding) motif; promoter contains a consensus binding sequence for transcription factor Abf1p","termid":"PBO:0083651"}


id: PBO:0090292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1/S-specific B-type cyclin Cig1","termid":"PBO:0090292"}


id: GO:1990538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + a xylan= CoA + an acetylated xylan.","definition_xrefs":["PMID:25141999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"xylan O-acetyltransferase activity","termid":"GO:1990538"}


id: GO:0098621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phosphoseryl-tRNA(Sec) + selenophosphoric acid + H2O => L-selenocysteinyl-tRNA(Sec) + 2 phosphoric acid.","definition_xrefs":["RHEA:25041","PMID:17142313","PMID:19608919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenotransferase activity","termid":"GO:0016785"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140098","GO:0140101","GO:0003824"],"is_obsolete":false,"name":"O-phosphoseryl-tRNA(Sec) selenium transferase activity","secondary_identifiers":["EC:2.9.1.2","Reactome:R-HSA-2408555"],"synonyms":[{"name":"O-phospho-L-seryl-tRNA(Sec):L-selenocysteinyl-tRNA synthase","type":"exact"},{"name":"O-phosphoseryl-tRNA:selenocysteinyl-tRNA synthase","type":"exact"},{"name":"SepSecS","type":"exact"},{"name":"phosphoseryl-selenocysteinyl-tRNA selenium transferase activity","type":"exact"}],"termid":"GO:0098621"}


id: PBO:0003385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol kinase Tor2","termid":"PBO:0003385"}


id: GO:0106156
data:
  {"annotated_genes":["SJAG_05265"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90911],"is_not":false,"summary":null,"term":"GO:0106156"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein L-lysine + 2-oxoglutarate + O2 = protein 4-hydroxy-L-lysine + succinate + CO2.","definition_xrefs":["RHEA:57156","GOC:pde","PMID:24486019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0140096","GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"peptidyl-lysine 4-dioxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9629946"],"termid":"GO:0106156","terms_by_termid":{"GO:0106156":null}}


id: MOD:00555
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 202 was merged with entry 195, remap to MOD:00548. modification from Unimod Chemical derivative","definition_xrefs":["Unimod:203"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00555 APTA-d0 with quaternary amine loss (obsolete MOD:00555)","termid":"MOD:00555"}


id: PBO:0109317
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome Loss when Overexpressed","termid":"PBO:0109317"}


id: PR:000050475
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein kinase wis1 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Ser-469 and Thr-473 of the amino acid sequence represented by UniProtKB:P33886. Example: UniProtKB:P33886, Ser-469, MOD:00046|Thr-473, MOD:00047.","definition_xrefs":["PMID:12181336","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase wis1 (Schizosaccharomyces pombe)","termid":"PR:000050474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wis1/Phos(S469,T473)","pombase_gene_id":"SPBC409.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: protein kinase wis1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-wis1/Phos:1","type":"exact"},{"name":"UniProtKB:P33886, Ser-469, MOD:00046|Thr-473, MOD:00047","type":"narrow"},{"name":"wis1/Phos(S469,T473)","type":"exact"}],"termid":"PR:000050475"}


id: GO:0002922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a humoral immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of humoral immune response","termid":"GO:0002920"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"humoral immune response","termid":"GO:0006959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of humoral immune response","synonyms":[{"name":"activation of humoral immune response","type":"narrow"},{"name":"stimulation of humoral immune response","type":"narrow"},{"name":"up regulation of humoral immune response","type":"exact"},{"name":"up-regulation of humoral immune response","type":"exact"},{"name":"upregulation of humoral immune response","type":"exact"}],"termid":"GO:0002922"}


id: GO:0021525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of lateral motor column neurons. Lateral motor column neurons are generated only on limb levels and send axons into the limb mesenchyme. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["PMID:11262869","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"},{"relation_name":"part_of","term_name":"somatic motor neuron differentiation","termid":"GO:0021523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral motor column neuron differentiation","termid":"GO:0021525"}


id: PATO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000484 tactile hyporesponsive (obsolete PATO:0000484)","termid":"PATO:0000484"}


id: PATO:0000380
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A frequency which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"frequency","termid":"PATO:0000044"},{"relation_name":"is_a","term_name":"increased rate","termid":"PATO:0000912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased frequency","synonyms":[{"name":"frequent","type":"related"},{"name":"high frequency","type":"exact"}],"termid":"PATO:0000380"}


id: GO:2000816
data:
  {"annotated_genes":["SJAG_00460","SJAG_02336","SJAG_01837","SJAG_02451","SJAG_01679","SJAG_03126","SJAG_03353","SJAG_03681","SJAG_04999","SJAG_04699","SJAG_00883","SJAG_01082","SJAG_04126","SJAG_01330","SJAG_04259","SJAG_02169","SJAG_04884","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99384],"is_not":false,"summary":null,"term":"GO:2000816"},{"annotations":[109883,110363,108056,103326,99998,104350,86835,95686,111991],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[109887,97898,95534,111640,86837,106005,102401,112769,110592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[111641,102402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[90305],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112773],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[90306],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic sister chromatid separation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid separation","termid":"GO:0010965"},{"relation_name":"is_a","term_name":"negative regulation of mitotic sister chromatid segregation","termid":"GO:0033048"},{"relation_name":"is_a","term_name":"negative regulation of chromosome separation","termid":"GO:1905819"},{"relation_name":"negatively_regulates","term_name":"mitotic sister chromatid separation","termid":"GO:0051306"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic sister chromatid separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of chromosome separation during mitosis","type":"related"},{"name":"negative regulation of mitotic chromosome separation","type":"related"},{"name":"negative regulation of mitotic sister chromatid resolution","type":"exact"},{"name":"negative regulation of sister chromatid separation during mitosis","type":"exact"}],"termid":"GO:2000816","terms_by_termid":{"GO:0007094":null,"GO:0045841":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:2000816":null}}


id: PBO:0057420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548v","termid":"PBO:0057420"}


id: PBO:0061473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding protein 2","termid":"PBO:0061473"}


id: PATO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an bearer by virtue of the bearer's extension in two dimensions.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-D extent","synonyms":[{"name":"2-D size","type":"exact"}],"termid":"PATO:0001709"}


id: GO:0061438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the renal system vasculature is generated and organized. Morphogenesis pertains to the creation of form.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10","PMID:11891195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"renal system vasculature development","termid":"GO:0061437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system vasculature morphogenesis","termid":"GO:0061438"}


id: GO:1903141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of endothelial barrier.","definition_xrefs":["GOC:als","PMID:24851274","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell development","termid":"GO:1901551"},{"relation_name":"is_a","term_name":"regulation of establishment of endothelial barrier","termid":"GO:1903140"},{"relation_name":"negatively_regulates","term_name":"establishment of endothelial barrier","termid":"GO:0061028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of endothelial barrier","synonyms":[{"name":"down regulation of establishment of endothelial barrier","type":"exact"},{"name":"down-regulation of establishment of endothelial barrier","type":"exact"},{"name":"downregulation of establishment of endothelial barrier","type":"exact"},{"name":"inhibition of establishment of endothelial barrier","type":"narrow"}],"termid":"GO:1903141"}


id: PBO:0084462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway; functionally redundant with Ssk2p; interacts with and is activated by Ssk1p; phosphorylates Pbs2p; SSK22 has a paralog, SSK2, that arose from the whole genome duplication","termid":"PBO:0084462"}


id: PBO:0087056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L27A; homologous to mammalian ribosomal protein L27, no bacterial homolog; RPL27A has a paralog, RPL27B, that arose from the whole genome duplication","termid":"PBO:0087056"}


id: PBO:0064141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase N2","termid":"PBO:0064141"}


id: PBO:0064732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 68","termid":"PBO:0064732"}


id: PBO:0047149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 181 member B","termid":"PBO:0047149"}


id: PBO:0081414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 267","termid":"PBO:0081414"}


id: PBO:0083638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF3j component of translation initiation factor 3 (eIF3); dual function protein involved in translation initiation as a substoichiometric component (eIF3j) of eIF3; required for 20S pre-rRNA processing; required at post-transcriptional step for efficient retrotransposition; absence decreases Ty1 Gag:GFP protein levels; binds eIF3 subunits Rpg1p, Prt1p and 18S rRNA; eIF3 also involved in programmed stop codon read through; human homolog EIF3J can complement yeast hcr1 mutant","termid":"PBO:0083638"}


id: PBO:0061980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AT member 1 pseudogene","termid":"PBO:0061980"}


id: PBO:0001583
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.2.5","termid":"PBO:0001583"}


id: PBO:0004597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set6 (predicted)","termid":"PBO:0004597"}


id: PBO:0085331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol transfer protein (PITP); controlled by the multiple drug resistance regulator Pdr1p; localizes to lipid particles and microsomes; controls levels of various lipids, may regulate lipid synthesis; homologous to Pdr17p; protein abundance increases in response to DNA replication stress","termid":"PBO:0085331"}


id: PBO:0059599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 11","termid":"PBO:0059599"}


id: PBO:0044362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 51","termid":"PBO:0044362"}


id: PBO:0060472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide phosphoribosyltransferase pseudogene 2","termid":"PBO:0060472"}


id: PBO:0061856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 1","termid":"PBO:0061856"}


id: PBO:0028559
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_microtubule_cytoskeleton_during_mitotic_interphase","termid":"PBO:0028559"}


id: SO:1000158
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intrachromosomal transposition whereby the segment between the first two breaks listed is removed and inserted at the third break; the insertion is in cytologically inverted orientation with respect to its flanking segments.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inversion","termid":"SO:1000036"},{"relation_name":"is_a","term_name":"inversion_cum_translocation","termid":"SO:1000148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_intrachromosomal_transposition","synonyms":[{"name":"(Drosophila)iTp","type":"related"},{"name":"inverted intrachromosomal transposition","type":"exact"}],"termid":"SO:1000158"}


id: PBO:0058208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4500 host gene","termid":"PBO:0058208"}


id: PBO:0050115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 25","termid":"PBO:0050115"}


id: PBO:0065575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parathyroid hormone","termid":"PBO:0065575"}


id: PBO:0058235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4524a","termid":"PBO:0058235"}


id: GO:0039519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus effect a change in the frequency, rate or extent of autophagy in the host.","definition_xrefs":["GOC:bf","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host cellular process","termid":"GO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by virus of host autophagy","synonyms":[{"name":"regulation by virus of host autophagy","type":"exact"}],"termid":"GO:0039519"}


id: GO:0048034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heme O, a derivative of heme containing a 17-carbon hydroxyethylfarnesyl side chain at position 8 of the tetrapyrrole macrocycle.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme biosynthetic process","termid":"GO:0006783"},{"relation_name":"is_a","term_name":"heme O metabolic process","termid":"GO:0048033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme O biosynthetic process","synonyms":[{"name":"haem O biosynthesis","type":"exact"},{"name":"haem O biosynthetic process","type":"exact"},{"name":"heme O anabolism","type":"exact"},{"name":"heme O biosynthesis","type":"exact"},{"name":"heme O formation","type":"exact"},{"name":"heme O synthesis","type":"exact"}],"termid":"GO:0048034"}


id: GO:0010372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellin biosynthetic process","termid":"GO:0010371"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of gibberellin biosynthetic process","synonyms":[{"name":"positive regulation of gibberellic acid biosynthetic process","type":"narrow"}],"termid":"GO:0010372"}


id: PBO:0017952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex substrate recognition subunit Apc10","termid":"PBO:0017952"}


id: PBO:0111825
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin family","termid":"PBO:0111825"}


id: PBO:0076558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 2","termid":"PBO:0076558"}


id: PBO:0011483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1-5,6,7,8-tetrahydrofolate (THF) synthase, trifunctional enzyme","termid":"PBO:0011483"}


id: PBO:0072852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A pseudogene 2","termid":"PBO:0072852"}


id: PBO:0029497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_normal_unseptated_germ_tube_morphology_(obsolete_FYPO:0002218)","termid":"PBO:0029497"}


id: GO:0070023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is formed by the association of a heterodimeric interleukin-12 receptor complex with an interleukin-12 heterodimer.","definition_xrefs":["PMID:11900991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"interleukin-12-interleukin-12 receptor complex","synonyms":[{"name":"IL12-IL12 receptor complex","type":"exact"},{"name":"IL12B-IL12RB1-IL12RB2 complex","type":"narrow"}],"termid":"GO:0070023"}


id: PBO:0063685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 5","termid":"PBO:0063685"}


id: SO:0000289
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat_region containing repeat_units of 2 to 10 bp repeated in tandem.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"satellite_DNA","termid":"SO:0000005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsatellite","secondary_identifiers":["http://en.wikipedia.org/wiki/Microsatellite"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:microsatellite","type":"exact"},{"name":"STR","type":"exact"},{"name":"microsatellite locus","type":"exact"},{"name":"microsatellite marker","type":"exact"},{"name":"short tandem repeat","type":"exact"}],"termid":"SO:0000289"}


id: GO:0046314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphocreatine, a phosphagen of creatine which is synthesized and broken down by creatine phosphokinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphocreatine metabolic process","termid":"GO:0006603"},{"relation_name":"is_a","term_name":"phosphagen biosynthetic process","termid":"GO:0042396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphocreatine biosynthetic process","synonyms":[{"name":"phosphocreatine anabolism","type":"exact"},{"name":"phosphocreatine biosynthesis","type":"exact"},{"name":"phosphocreatine formation","type":"exact"},{"name":"phosphocreatine synthesis","type":"exact"}],"termid":"GO:0046314"}


id: PBO:0049556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 18","termid":"PBO:0049556"}


id: PBO:0068393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 213","termid":"PBO:0068393"}


id: PBO:0036021
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_recombination_at_rDNA","termid":"PBO:0036021"}


id: PBO:0082951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; binds the drug cyclosporin A; N-terminally propionylated in vivo; protein abundance increases in response to DNA replication stress","termid":"PBO:0082951"}


id: GO:0001086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIIA class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIIA-class binding (obsolete GO:0001086)","synonyms":[{"name":"TFIIA-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001086"}


id: GO:0005108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane ephrin (obsolete GO:0005108)","synonyms":[{"name":"transmembrane ephrin","type":"exact"}],"termid":"GO:0005108"}


id: GO:0036474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process that results in permanent cessation of all vital functions of a cell upon exposure to hydrogen peroxide (H2O2).","definition_xrefs":["GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete cell death in response to hydrogen peroxide (obsolete GO:0036474)","synonyms":[{"name":"cell death in response to H2O2","type":"exact"},{"name":"hydrogen peroxide-mediated cell death","type":"related"}],"termid":"GO:0036474"}


id: PBO:0076303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 1","termid":"PBO:0076303"}


id: PBO:0113260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal matrix protein that regulates lysine biosynthesis; localization to peroxisomes upon lysine deprivation is dependent on targeting factor Pex5p and lysine biosynthesis enzyme Lys1p; affects abundance of Lys1p and the lysine biosynthesis pathway","termid":"PBO:0113260"}


id: GO:0034269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of discadenine, (2S)-2-amino-4-{6-[(3-methylbut-2-en-1-yl)amino]-3H-purin-3-yl}butanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin catabolic process","termid":"GO:0009823"},{"relation_name":"is_a","term_name":"discadenine metabolic process","termid":"GO:0034267"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"discadenine catabolic process","synonyms":[{"name":"discadenine breakdown","type":"exact"},{"name":"discadenine catabolism","type":"exact"},{"name":"discadenine degradation","type":"exact"}],"termid":"GO:0034269"}


id: PATO:0001266
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of blue hue and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blue","termid":"PATO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated blue","synonyms":[{"name":"pale blue","type":"exact"}],"termid":"PATO:0001266"}


id: GO:0000285
data:
  {"annotated_genes":["SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106086],"is_not":false,"summary":null,"term":"GO:0000285"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate + ADP + H+.","definition_xrefs":["EC:2.7.1.150","RHEA:13609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 5-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.7.1.150-RXN","Reactome:R-HSA-1675921","Reactome:R-HSA-1675910","Reactome:R-HSA-1676134","Reactome:R-HSA-1676168","KEGG_REACTION:R05802"],"synonyms":[{"name":"ATP:1-phosphatidyl-1D-myo-inositol-3-phosphate 5-phosphotransferase activity","type":"related"},{"name":"phosphatidylinositol 3-phosphate 5-kinase activity","type":"related"},{"name":"phosphatidylinositol-3-phosphate 5-kinase activity","type":"exact"},{"name":"type III PIP kinase activity","type":"related"}],"termid":"GO:0000285","terms_by_termid":{"GO:0000285":null}}


id: PBO:0060304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL12A pseudogene 1","termid":"PBO:0060304"}


id: PBO:0029342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_mitochondrial_polycistronic_RNA_precursors","termid":"PBO:0029342"}


id: PBO:0062622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily G member 1 pseudogene","termid":"PBO:0062622"}


id: PBO:0059409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35","termid":"PBO:0059409"}


id: POMBASE_GENE_EX_REL:in_presence_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"a substance is present","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_presence_of","termid":"POMBASE_GENE_EX_REL:in_presence_of"}


id: FYPO:0004588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitosis takes place abnormally after the cell has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype following normal mitosis","termid":"FYPO:0004593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000337","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitosis following normal mitosis","synonyms":[{"name":"abnormal mitosis following normal mitosis and interphase","type":"exact"},{"name":"abnormal mitosis following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"abnormal mitosis following normal mitosis during vegetative growth","type":"exact"},{"name":"abnormal mitotic nuclear division following normal mitotic nuclear division","type":"exact"},{"name":"abnormal nuclear division following normal nuclear division during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004588"}


id: GO:0042267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a natural killer cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors.","definition_xrefs":["GOC:add","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"},{"relation_name":"is_a","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell mediated cytotoxicity","synonyms":[{"name":"NK cell mediated cell death","type":"exact"},{"name":"NK cell mediated cell killing","type":"exact"},{"name":"NK cell mediated cytolysis","type":"related"},{"name":"NK cell mediated cytotoxicity","type":"exact"},{"name":"killer activity","type":"related"},{"name":"natural killer cell mediated cell death","type":"exact"},{"name":"natural killer cell mediated cell killing","type":"exact"},{"name":"natural killer cell mediated cytolysis","type":"related"},{"name":"natural killer-cell mediated cytolysis","type":"related"}],"termid":"GO:0042267"}


id: GO:0042043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurexin, a synaptic cell surface protein related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals.","definition_xrefs":["PMID:18923512","GOC:curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neurexin family protein binding","secondary_identifiers":["GO:0019963"],"synonyms":[{"name":"neuroligin","type":"related"}],"termid":"GO:0042043"}


id: MOD:01282
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:15541752","Unimod:206#H","PubMed:10825247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrolein addition +56","termid":"MOD:00557"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +56 - site H","synonyms":[{"name":"Acrolein addition +56","type":"related"},{"name":"Delta:H(4)C(3)O(1)","type":"related"}],"termid":"MOD:01282"}


id: _global:is_unit_of
data:
  {"annotation_feature_type":"gene","cv_name":"pato.ontology","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_unit_of","termid":"_global:is_unit_of"}


id: FYPO:0001028
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in any part of interphase, under conditions where arrest is not a normal occurrence.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic interphase","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal mitotic cell cycle arrest in interphase","type":"exact"},{"name":"abnormal mitotic interphase cell cycle arrest","type":"exact"}],"termid":"FYPO:0001028","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: GO:0036484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The characteristic movement of trunk neural crest cells from the neural tube to other locations in the vertebrate embryo.","definition_xrefs":["GOC:mat","GOC:PARL","GOC:bf","PMID:2387238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell migration","termid":"GO:0001755"},{"relation_name":"part_of","term_name":"trunk segmentation","termid":"GO:0035290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trunk neural crest cell migration","synonyms":[{"name":"trunk NCC migration","type":"exact"}],"termid":"GO:0036484"}


id: PBO:0001750
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homodimeric","termid":"PBO:0001750"}


id: GO:0061617
data:
  {"annotated_genes":["SJAG_02002","SJAG_02028","SJAG_02501","SJAG_05241"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97802,103411,106111,110727],"is_not":false,"summary":null,"term":"GO:0061617"}]},"cv_name":"cellular_component","definition":"Mitochondrial inner membrane complex involved in maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane. In Saccharomyces cerevisiae the complex has six subunits: MIC10, MIC12, MIC19, MIC26, MIC27, and MIC60.","definition_xrefs":["PMID:24687277","PMID:21944719","GOC:dph","PMID:21987634","PMID:22009199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02002":null,"SJAG_02028":null,"SJAG_02501":null,"SJAG_05241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005739"],"is_obsolete":false,"name":"MICOS complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Fcj1 complex","type":"exact"},{"name":"MINOS complex","type":"exact"},{"name":"MitOS complex","type":"exact"},{"name":"mitochondrial contact site and cristae organizing system","type":"exact"}],"termid":"GO:0061617","terms_by_termid":{"GO:0061617":null}}


id: PBO:0072891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strawberry notch homolog 2","termid":"PBO:0072891"}


id: GO:0018415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a 3Fe-2S cluster via tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide.","definition_xrefs":["RESID:AA0292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016226","GO:0044085"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl L-cysteine persulphido bis-L-glutamato L-histidino nickel triiron disulphide trioxide","type":"exact"}],"termid":"GO:0018415"}


id: GO:0150102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monocyte activation.","definition_xrefs":["GOC:aruk","PMID:15597323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"negatively_regulates","term_name":"monocyte activation","termid":"GO:0042117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte activation","synonyms":[{"name":"repression of monocyte activation","type":"exact"}],"termid":"GO:0150102"}


id: PBO:0028444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0028444"}


id: GO:0047245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosaminyldiphosphoundecaprenol + UDP-D-glucose = beta-D-glucosyl-1,4-N-acetyl-D-glucosaminyldiphosphoundecaprenol + UDP.","definition_xrefs":["MetaCyc:2.4.1.188-RXN","EC:2.4.1.188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"N-acetylglucosaminyldiphosphoundecaprenol glucosyltransferase activity","secondary_identifiers":["RHEA:20952"],"synonyms":[{"name":"UDP-D-glucose:N-acetylglucosaminyl pyrophosphorylundecaprenol glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:N-acetyl-D-glucosaminyldiphosphoundecaprenol 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:N-acetyl-D-glucosaminyldiphosphoundecaprenol 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-acetylglucosaminylpyrophosphorylundecaprenol glucosyltransferase activity","type":"related"}],"termid":"GO:0047245"}


id: GO:0140380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of psilocybin, a psychotropic tryptamine-derived natural product.","definition_xrefs":["PMID:28763571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"psilocybin biosynthetic process","termid":"GO:0140380"}


id: PBO:0011130
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene","termid":"PBO:0011130"}


id: GO:0001703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gastrulation process in which the initial invagination becomes the mouth and the anus forms second.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastrulation with mouth forming first","synonyms":[{"name":"protostomic gastrulation","type":"narrow"}],"termid":"GO:0001703"}


id: PBO:0013786
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha1,2-Mannosyltransferase Homolog","termid":"PBO:0013786"}


id: GO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that recognizes and ubiquitinates membrane proteins with misfolded cytosolic domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Ssm4p/Doa10p.","definition_xrefs":["GOC:elh","PMID:16873066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER ubiquitin ligase complex","termid":"GO:0000835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005789","GO:0032991","GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"Doa10p ubiquitin ligase complex","synonyms":[{"name":"Ssm4p ubiquitin ligase complex","type":"exact"}],"termid":"GO:0000837"}


id: PBO:0077069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain containing 3 pseudogene 1","termid":"PBO:0077069"}


id: FYPO:0001456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to endoplasmic reticulum stress is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"increased RNA accumulation during cellular response to endoplasmic reticulum stress","type":"related"},{"name":"increased RNA level during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"},{"name":"increased RNA level during response to ER stress","type":"exact"},{"name":"increased RNA level under ER stress-inducing conditions","type":"related"},{"name":"increased mRNA level during cellular response to endoplasmic reticulum stress","type":"narrow"},{"name":"increased transcript level during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"increased unfolded protein response","type":"related"}],"termid":"FYPO:0001456"}


id: PBO:0002565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF890 family protein","termid":"PBO:0002565"}


id: GO:0046386
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[95090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribose phosphate metabolic process","termid":"GO:0019692"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose phosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribose phosphate breakdown","type":"exact"},{"name":"deoxyribose phosphate catabolism","type":"exact"},{"name":"deoxyribose phosphate degradation","type":"exact"}],"termid":"GO:0046386","terms_by_termid":{"GO:0035863":null,"GO:0046081":null}}


id: PBO:0078261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon ACA) 1-1","termid":"PBO:0078261"}


id: PBO:0074226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC45A4 antisense RNA 1","termid":"PBO:0074226"}


id: PBO:0076739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 11 like 1","termid":"PBO:0076739"}


id: PBO:0066859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 159","termid":"PBO:0066859"}


id: PBO:0069692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 971, pseudogene","termid":"PBO:0069692"}


id: GO:1905837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triterpenoid stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:28078994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to triterpenoid","termid":"GO:1905836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to triterpenoid","termid":"GO:1905837"}


id: PR:O60141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 94 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03000","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein saf4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.10c","secondary_identifiers":["UniProtKB:O60141"],"synonyms":[{"name":"Spom972h-CCDC94","type":"exact"}],"termid":"PR:O60141"}


id: PBO:0091058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige protein homolog Lvs1","termid":"PBO:0091058"}


id: GO:0047935
data:
  {"annotated_genes":["SJAG_02148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114515],"is_not":false,"summary":null,"term":"GO:0047935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose + NADP+ = D-glucono-1,5-lactone + NADPH.","definition_xrefs":["EC:1.1.1.119","MetaCyc:GLUCOSE-1-DEHYDROGENASE-NADP+-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose 1-dehydrogenase [NAD(P)+] activity","termid":"GO:0047936"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucose 1-dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14405"],"synonyms":[{"name":"D-glucose:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"NADP-dependent glucose dehydrogenase activity","type":"related"},{"name":"NADP-linked aldohexose dehydrogenase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide phosphate-linked aldohexose dehydrogenase activity","type":"related"}],"termid":"GO:0047935","terms_by_termid":{"GO:0047935":null}}


id: GO:0042273
data:
  {"annotated_genes":["SJAG_02840","SJAG_02759","SJAG_03466","SJAG_03413","SJAG_04308","SJAG_00166","SJAG_00921","SJAG_02644","SJAG_00271","SJAG_01811","SJAG_03713","SJAG_00932","SJAG_02745","SJAG_00882","SJAG_04304","SJAG_04289","SJAG_02275","SJAG_05223","SJAG_01954","SJAG_00479","SJAG_03697","SJAG_01454","SJAG_04180","SJAG_00537","SJAG_00323","SJAG_03666","SJAG_02754","SJAG_01839","SJAG_00390","SJAG_04562","SJAG_01364","SJAG_02475","SJAG_05190","SJAG_04066","SJAG_03496","SJAG_03905","SJAG_04346","SJAG_02952","SJAG_04669","SJAG_04992","SJAG_01420","SJAG_05248","SJAG_04847","SJAG_04108","SJAG_04414","SJAG_04176","SJAG_04004","SJAG_01581","SJAG_03012","SJAG_03080","SJAG_02436","SJAG_02890","SJAG_04599","SJAG_00749","SJAG_01568","SJAG_00949","SJAG_02427","SJAG_04940","SJAG_03773","SJAG_01621","SJAG_00722","SJAG_01752","SJAG_03658","SJAG_03458","SJAG_02868","SJAG_00752","SJAG_05679","SJAG_02830","SJAG_01122","SJAG_01606","SJAG_04919","SJAG_03789","SJAG_02374","SJAG_02535","SJAG_02508","SJAG_02417","SJAG_00689","SJAG_01339","SJAG_04330","SJAG_01494","SJAG_00841","SJAG_01813","SJAG_04395","SJAG_04492","SJAG_01161"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84073,86068,86478,86931,87158,87159,88110,94515,96575,96837,97974,99010,99504,100655,101811,101812,103065,104047,104089,104270,107159,108383,108899,112209,112651,113372,114974,115025,115026],"is_not":false,"summary":null,"term":"GO:0042273"},{"annotations":[112748,108998,95281,102085,111862,112258,88483,105106,107534,94088,96691,85749,99614,103531,89299,106904,88901,108238,111861,96505,114957,96835,98621],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[100218,114625,87793,91062],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[93178,100384,88196,106833,90940,95559,98004,111441,98622,83787,100155,100235,101297,111442,106834,112672,100890,98005,94089,112671],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180023"},{"annotations":[88903,103972,109714,112260,114959,88992],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000470"},{"annotations":[102087,106906,111863,110937,111864,113743,85751,88484,113722,85963,96836,94058,94091],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000463"},{"annotations":[104479],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902775"},{"annotations":[89460,98587,111803,97309,113846,93591,111736,93590,98588,101639,99780,114257],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000027"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a large ribosomal subunit; includes transport to the sites of protein synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex biogenesis","termid":"GO:0022613"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":85,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_00271":null,"SJAG_00323":null,"SJAG_00390":null,"SJAG_00479":null,"SJAG_00537":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00841":null,"SJAG_00882":null,"SJAG_00921":null,"SJAG_00932":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01339":null,"SJAG_01364":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01568":null,"SJAG_01581":null,"SJAG_01606":null,"SJAG_01621":null,"SJAG_01752":null,"SJAG_01811":null,"SJAG_01813":null,"SJAG_01839":null,"SJAG_01954":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02417":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02475":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02644":null,"SJAG_02745":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02890":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03413":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03658":null,"SJAG_03666":null,"SJAG_03697":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03789":null,"SJAG_03905":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04176":null,"SJAG_04180":null,"SJAG_04289":null,"SJAG_04304":null,"SJAG_04308":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04414":null,"SJAG_04492":null,"SJAG_04562":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04847":null,"SJAG_04919":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_05190":null,"SJAG_05223":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"ribosomal large subunit biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal large subunit biogenesis and assembly","type":"exact"}],"termid":"GO:0042273","terms_by_termid":{"GO:0000027":null,"GO:0000448":null,"GO:0000463":null,"GO:0000470":null,"GO:0042273":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: PBO:0049350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 8","termid":"PBO:0049350"}


id: GO:0034706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ion channel complex through which sodium ions pass.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sodium channel complex","termid":"GO:0034706"}


id: GO:0035971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphoric residues from peptidyl-O-phospho-L-histidine to form peptidyl-histidine.","definition_xrefs":["GOC:vk","GOC:BHF","PMID:12383260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine dephosphorylation","termid":"GO:0035971"}


id: PBO:0031864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-qualifier","termid":"PBO:0031864"}


id: PBO:0059373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 6","termid":"PBO:0059373"}


id: PBO:0003677
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CRE 5'-TGACGT-3'","termid":"PBO:0003677"}


id: PBO:0024816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of","termid":"PBO:0024816"}


id: PBO:0113265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoinositide binding protein; required for vesicle formation in cytoplasm-to-vacuole targeting (CVT) pathway, autophagy, micronucleophagy and mitophagy; binds to several phosphoinositides including PtdIns(3,5)P2, PI3P and PI4P; involved in PI3P-dependent recruitment and organization of both Atg12-Atg5-Atg16 complex and Atg8p at pre-autophagosomal structure; necessary for oxidant-induced cell death; targeted to vacuole via AP-3 pathway; WD-40 repeat containing PROPPIN family member","termid":"PBO:0113265"}


id: PBO:0060243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC proto-oncogene, bHLH transcription factor","termid":"PBO:0060243"}


id: PBO:0083970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucokinase; catalyzes the phosphorylation of glucose at C6 in the first irreversible step of glucose metabolism; one of three glucose phosphorylating enzymes; expression regulated by non-fermentable carbon sources; GLK1 has a paralog, EMI2, that arose from the whole genome duplication","termid":"PBO:0083970"}


id: GO:0032943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a mononuclear cell population by cell division. A mononuclear cell is a leukocyte with a single non-segmented nucleus in the mature form.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mononuclear cell proliferation","synonyms":[{"name":"PBMC proliferation","type":"narrow"},{"name":"peripheral blood mononuclear cell proliferation","type":"narrow"}],"termid":"GO:0032943"}


id: PBO:0065427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1","termid":"PBO:0065427"}


id: PBO:0059715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 23","termid":"PBO:0059715"}


id: PBO:0044365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 55","termid":"PBO:0044365"}


id: PR:Q9HGM5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX49 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04078","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.06c","secondary_identifiers":["UniProtKB:Q9HGM5"],"synonyms":[{"name":"Spom972h-DDX49","type":"exact"}],"termid":"PR:Q9HGM5"}


id: PBO:0052345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 2B","termid":"PBO:0052345"}


id: GO:1905893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cellular response to thapsigargin.","definition_xrefs":["GOC:bc","GO_REF:0000058","GOC:TermGenie","PMID:21803450","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular response to thapsigargin (obsolete GO:1905893)","synonyms":[{"name":"activation of cellular response to thapsigargin","type":"narrow"},{"name":"up regulation of cellular response to thapsigargin","type":"exact"},{"name":"up-regulation of cellular response to thapsigargin","type":"exact"},{"name":"upregulation of cellular response to thapsigargin","type":"exact"}],"termid":"GO:1905893"}


id: PBO:0030792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spore_with_normal_morphology","termid":"PBO:0030792"}


id: PBO:0029963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_hydrogen_ion_transporting_ATP_synthase_activity,_rotational_mechanism","termid":"PBO:0029963"}


id: PBO:0004989
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acatalasia","termid":"PBO:0004989"}


id: GO:1901981
data:
  {"annotated_genes":["SJAG_00118","SJAG_00368","SJAG_01516","SJAG_00115","SJAG_00638","SJAG_05179","SJAG_04010","SJAG_01382","SJAG_02657","SJAG_00971","SJAG_03250","SJAG_01783","SJAG_00173","SJAG_02166","SJAG_02468","SJAG_00724","SJAG_00152","SJAG_01143","SJAG_04077","SJAG_04960","SJAG_01945","SJAG_00216","SJAG_01135","SJAG_03851","SJAG_01519","SJAG_01769","SJAG_04024","SJAG_02587","SJAG_02248","SJAG_01748","SJAG_04219","SJAG_00314","SJAG_00117","SJAG_02392","SJAG_04963","SJAG_02572","SJAG_00663","SJAG_04644","SJAG_02177"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91967],"is_not":false,"summary":null,"term":"GO:1901981"},{"annotations":[98531,113543,84196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005547"},{"annotations":[95427,94713,96388,93719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080025"},{"annotations":[86693,93720,95938,100918,94714,95801,105890,106089,95937,111316,87607,97815,104751,108557,92042,105742,96389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032266"},{"annotations":[85738,95391,97872,102111,102687,98023,115035,86863,110976,97862,113126,95428,114569,84128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005546"},{"annotations":[90614,95392,96221,98532,94821,108597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070273"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol phosphate.","definition_xrefs":["GOC:TermGenie","PMID:23445487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol binding","termid":"GO:0035091"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00117":null,"SJAG_00118":null,"SJAG_00152":null,"SJAG_00173":null,"SJAG_00216":null,"SJAG_00314":null,"SJAG_00368":null,"SJAG_00638":null,"SJAG_00663":null,"SJAG_00724":null,"SJAG_00971":null,"SJAG_01135":null,"SJAG_01143":null,"SJAG_01382":null,"SJAG_01516":null,"SJAG_01519":null,"SJAG_01748":null,"SJAG_01769":null,"SJAG_01783":null,"SJAG_01945":null,"SJAG_02166":null,"SJAG_02177":null,"SJAG_02248":null,"SJAG_02392":null,"SJAG_02468":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02657":null,"SJAG_03250":null,"SJAG_03851":null,"SJAG_04010":null,"SJAG_04024":null,"SJAG_04077":null,"SJAG_04219":null,"SJAG_04644":null,"SJAG_04960":null,"SJAG_04963":null,"SJAG_05179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol phosphate binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901981","terms_by_termid":{"GO:0005546":null,"GO:0005547":null,"GO:0032266":null,"GO:0070273":null,"GO:0080025":null,"GO:1901981":null}}


id: MOD:00482
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N-formyl-L-methionine (not known as a natural, post-translational modification process).","definition_xrefs":["PubMed:3042771","PubMed:11152118","RESID:AA0021#MET","PubMed:2165784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formyl-L-methionine residue","termid":"MOD:00030"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-formyl-L-methionine (Met)","synonyms":[{"name":"(2S)-2-formylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formamido-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-formylazanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"MOD_RES N-formylmethionine","type":"exact"},{"name":"N-formyl-L-methionine","type":"exact"},{"name":"N-formylated L-methionine","type":"exact"},{"name":"NFoMet","type":"exact"}],"termid":"MOD:00482"}


id: PBO:0048000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 3","termid":"PBO:0048000"}


id: PBO:0034182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-concretizes","termid":"PBO:0034182"}


id: PBO:0091773
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae CDC6","termid":"PBO:0091773"}


id: PBO:0042029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 86","termid":"PBO:0042029"}


id: GO:1904229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of succinate dehydrogenase activity.","definition_xrefs":["GOC:rl","GO_REF:0000059","PMID:18160053","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of succinate dehydrogenase activity","synonyms":[{"name":"regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"regulation of fumarate reductase activity","type":"exact"},{"name":"regulation of fumaric hydrogenase activity","type":"exact"},{"name":"regulation of succinate oxidoreductase activity","type":"exact"},{"name":"regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"regulation of succinic dehydrogenase activity","type":"broad"},{"name":"regulation of succinodehydrogenase activity","type":"exact"},{"name":"regulation of succinyl dehydrogenase activity","type":"exact"}],"termid":"GO:1904229"}


id: PBO:0075522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E2B","termid":"PBO:0075522"}


id: GO:0106026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Gly-tRNA(Ala).","definition_xrefs":["PMID:28362257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA editing activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0140098","GO:0003824","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"Gly-tRNA(Ala) hydrolase activity","termid":"GO:0106026"}


id: GO:0007124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cells grow as a chain of physically attached, elongated cells in response to an environmental stimulus or stimuli.","definition_xrefs":["PMID:24710476","PMID:11104818","GOC:krc","PMID:19347739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"},{"relation_name":"is_a","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pseudohyphal growth","termid":"GO:0007124"}


id: PBO:0048597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone receptor","termid":"PBO:0048597"}


id: PBO:0060225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix remodeling associated 7","termid":"PBO:0060225"}


id: PBO:0046562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 4","termid":"PBO:0046562"}


id: PBO:0069605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 882, pseudogene","termid":"PBO:0069605"}


id: PATO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphologic quality inhering in a bearer by virtue of the bearer's relative size, organization and distribution of its surface elements or the representation or invention of the appearance of its surface; visual and tactile surface characteristics.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"texture","termid":"PATO:0000150"}


id: PBO:0036074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_microtubule_organizing_center","termid":"PBO:0036074"}


id: GO:0050783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cocaine, an alkaloid obtained from the dried leaves of the shrub Erythroxylon coca. It is a cerebral stimulant and narcotic.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid metabolic process","termid":"GO:0046448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cocaine metabolic process","synonyms":[{"name":"cocaine metabolism","type":"exact"}],"termid":"GO:0050783"}


id: PBO:0053933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1232","termid":"PBO:0053933"}


id: PBO:0066383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDX pseudogene 3","termid":"PBO:0066383"}


id: PBO:0048449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grancalcin","termid":"PBO:0048449"}


id: PBO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATPase inhibitor (predicted)","termid":"PBO:0005837"}


id: PBO:0049316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 4","termid":"PBO:0049316"}


id: PBO:0066677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLF pseudogene 1","termid":"PBO:0066677"}


id: PBO:0042058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 121","termid":"PBO:0042058"}


id: PBO:0048749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 1 pseudogene 2","termid":"PBO:0048749"}


id: GO:0051221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of tungsten into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"tungsten incorporation into metallo-sulfur cluster","synonyms":[{"name":"tungsten incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0051221"}


id: PBO:0027227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_heme_binding","termid":"PBO:0027227"}


id: PBO:0028731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynylselenocysteine_level_during_vegetative_growth","termid":"PBO:0028731"}


id: FYPO:0005604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Rad52 accumulates remain present for longer than normal during a cellular response to ionizing radiation.","definition_xrefs":["PMID:27098497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of Rad52 focus presence during vegetative growth","termid":"FYPO:0007191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation","synonyms":[{"name":"delayed peak level of Rad52 foci during cellular response to ionizing radiation","type":"related"},{"name":"increased duration of Rad22 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"increased persistence of Rad52 foci during cellular response to ionizing radiation","type":"exact"},{"name":"prolonged Rad52 focus presence during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005604"}


id: PBO:0088885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Pwp1","termid":"PBO:0088885"}


id: GO:1905609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smooth muscle cell-matrix adhesion.","definition_xrefs":["PMID:14970114","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-matrix adhesion","termid":"GO:0001954"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell-matrix adhesion","termid":"GO:2000097"},{"relation_name":"positively_regulates","term_name":"smooth muscle cell-matrix adhesion","termid":"GO:0061302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of smooth muscle cell-matrix adhesion","synonyms":[{"name":"activation of smooth muscle cell-matrix adhesion","type":"narrow"},{"name":"up regulation of smooth muscle cell-matrix adhesion","type":"exact"},{"name":"up-regulation of smooth muscle cell-matrix adhesion","type":"exact"},{"name":"upregulation of smooth muscle cell-matrix adhesion","type":"exact"}],"termid":"GO:1905609"}


id: GO:1902461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal stem cell proliferation.","definition_xrefs":["GOC:pm","GOC:TermGenie","PMID:18672106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell proliferation","termid":"GO:1902460"},{"relation_name":"is_a","term_name":"negative regulation of stem cell proliferation","termid":"GO:2000647"},{"relation_name":"negatively_regulates","term_name":"mesenchymal stem cell proliferation","termid":"GO:0097168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal stem cell proliferation","synonyms":[{"name":"down regulation of MSC proliferation","type":"exact"},{"name":"down regulation of mesenchymal stem cell proliferation","type":"exact"},{"name":"down-regulation of MSC proliferation","type":"exact"},{"name":"down-regulation of mesenchymal stem cell proliferation","type":"exact"},{"name":"downregulation of MSC proliferation","type":"exact"},{"name":"downregulation of mesenchymal stem cell proliferation","type":"exact"},{"name":"inhibition of MSC proliferation","type":"narrow"},{"name":"inhibition of mesenchymal stem cell proliferation","type":"narrow"},{"name":"negative regulation of MSC proliferation","type":"exact"}],"termid":"GO:1902461"}


id: PBO:0054159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1526","termid":"PBO:0054159"}


id: GO:2000353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell apoptotic process.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"is_a","term_name":"regulation of endothelial cell apoptotic process","termid":"GO:2000351"},{"relation_name":"positively_regulates","term_name":"endothelial cell apoptotic process","termid":"GO:0072577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell apoptotic process","synonyms":[{"name":"positive regulation of apoptosis of endothelial cells","type":"exact"},{"name":"positive regulation of endothelial cell apoptosis","type":"narrow"},{"name":"positive regulation of endothelial cell programmed cell death by apoptosis","type":"exact"},{"name":"positive regulation of killing of endothelial cells","type":"exact"},{"name":"positive regulation of programmed cell death of endothelial cells by apoptosis","type":"exact"},{"name":"positive regulation of programmed cell death, endothelial cells","type":"exact"}],"termid":"GO:2000353"}


id: PBO:0067701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 9","termid":"PBO:0067701"}


id: PBO:0086033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, contains a putative zinc-binding domain; expressed during sporulation; SPS18 has a paralog, GCS1, that arose from the whole genome duplication","termid":"PBO:0086033"}


id: PBO:0001845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S10 (predicted)","termid":"PBO:0001845"}


id: PBO:0073899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 13 member 5","termid":"PBO:0073899"}


id: GO:0060928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an atrioventricular (AV) node cell over time, from its formation to the mature state.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac pacemaker cell development","termid":"GO:0060926"},{"relation_name":"part_of","term_name":"atrioventricular node cell differentiation","termid":"GO:0060922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular node cell development","synonyms":[{"name":"AV node cell development","type":"exact"}],"termid":"GO:0060928"}


id: PBO:0071406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 12","termid":"PBO:0071406"}


id: PBO:0070499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 34","termid":"PBO:0070499"}


id: GO:0004892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete B cell receptor activity (obsolete GO:0004892)","synonyms":[{"name":"B cell receptor activity","type":"exact"}],"termid":"GO:0004892"}


id: PATO:0001205
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having toothlike projections in the margin.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serrated","termid":"PATO:0001206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentated","synonyms":[{"name":"dentate","type":"exact"},{"name":"toothed","type":"exact"}],"termid":"PATO:0001205"}


id: FYPO:0003192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleus during mitosis","synonyms":[{"name":"abolished protein localisation to nucleus during mitosis","type":"exact"},{"name":"abolished protein localization to nucleus during mitosis during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleus during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to nucleus during mitotic M phase","type":"related"},{"name":"abolished protein localization to nucleus during mitotic M-phase","type":"related"},{"name":"abolished protein localization to nucleus during mitotic nuclear division","type":"exact"},{"name":"nuclear exclusion during mitosis","type":"related"},{"name":"nuclear protein exclusion during mitosis","type":"related"},{"name":"protein localization to nucleus abolished during mitosis","type":"exact"}],"termid":"FYPO:0003192"}


id: PBO:0080966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 7C","termid":"PBO:0080966"}


id: GO:0016717
data:
  {"annotated_genes":["SJAG_03509","SJAG_05311","SJAG_03249","SJAG_01057","SJAG_00717","SJAG_03943"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000249"},{"annotations":[103629,85783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000248"},{"annotations":[85784,103630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050046"},{"annotations":[108638,105813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042284"},{"annotations":[110500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004768"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced to two molecules of water.","definition_xrefs":["EC:1.14.19.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_01057":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03943":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016717","terms_by_termid":{"GO:0000248":null,"GO:0000249":null,"GO:0004768":null,"GO:0042284":null,"GO:0050046":null}}


id: PBO:0040895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMPR1B divergent transcript","termid":"PBO:0040895"}


id: PBO:0049412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2C","termid":"PBO:0049412"}


id: GO:1902079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-valine.","definition_xrefs":["PMID:23085840","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valine catabolic process","termid":"GO:0006574"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-valine metabolic process","termid":"GO:1902114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"D-valine catabolic process","synonyms":[{"name":"D-valine breakdown","type":"exact"},{"name":"D-valine catabolism","type":"exact"},{"name":"D-valine degradation","type":"exact"}],"termid":"GO:1902079"}


id: MOD:00671
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a acyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-acylated residue","synonyms":[{"name":"OAcylRes","type":"exact"}],"termid":"MOD:00671"}


id: GO:0050957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive an orientational stimulus, convert it to a molecular signal, and recognize and characterize the signal. Equilibrioception refers to a combination of processes by which an organism can perceive its orientation with respect to gravity. In animals, stimuli come from labyrinth system of the inner ears, monitoring the direction of motion; visual stimuli, with information on orientation and motion; pressure receptors, which tell the organism which body surfaces are in contact with the ground; and proprioceptive cues, which report which parts of the body are in motion.","definition_xrefs":["PMID:29303967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"},{"relation_name":"part_of","term_name":"neuromuscular process controlling balance","termid":"GO:0050885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"equilibrioception","secondary_identifiers":["Wikipedia:Equilibrioception"],"synonyms":[{"name":"sensory perception of orientation with respect to gravity","type":"exact"}],"termid":"GO:0050957"}


id: GO:0120147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A [sulfatase]-L-cysteine + O2 + 2 a thiol = a [sulfatase]-3-oxo-L-alanine + hydrogen sulfide + a disulfide + H2O.","definition_xrefs":["RHEA:51152","EC:1.8.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"formylglycine-generating oxidase activity","secondary_identifiers":["MetaCyc:RXN-16226"],"termid":"GO:0120147"}


id: PBO:0036018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_invertase_activity_during_glucose_starvation","termid":"PBO:0036018"}


id: GO:0098502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing one or more phosphate groups from a DNA molecule.","definition_xrefs":["GOC:DOS"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA dephosphorylation (obsolete GO:0098502)","termid":"GO:0098502"}


id: PR:O13969
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24C9.09 gene.","definition_xrefs":["UniProtKB:O13969","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.09","synonyms":[{"name":"Spom972h-SPAC24C9.09","type":"exact"},{"name":"ThrRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"threonyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13969"}


id: PBO:0045920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 14","termid":"PBO:0045920"}


id: PBO:0065492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 1","termid":"PBO:0065492"}


id: PBO:0046936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member B","termid":"PBO:0046936"}


id: FYPO:0008155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which regulatory lncRNA 3' end processing is abnormal.","definition_xrefs":["PMID:32415063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000294","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulatory lncRNA 3'-end processing","termid":"FYPO:0008155"}


id: GO:0001956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a neurotransmitter.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter transport","termid":"GO:0051590"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neurotransmitter secretion","synonyms":[{"name":"activation of neurotransmitter secretion","type":"narrow"},{"name":"stimulation of neurotransmitter secretion","type":"narrow"},{"name":"up regulation of neurotransmitter secretion","type":"exact"},{"name":"up-regulation of neurotransmitter secretion","type":"exact"},{"name":"upregulation of neurotransmitter secretion","type":"exact"}],"termid":"GO:0001956"}


id: PBO:0049360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 19","termid":"PBO:0049360"}


id: GO:0042248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of an established polarized follicular epithelial sheet.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of follicular epithelium","termid":"GO:0016334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"maintenance of polarity of follicular epithelium","termid":"GO:0042248"}


id: PBO:0074078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A51 pseudogene 2","termid":"PBO:0074078"}


id: GO:1903283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutathione peroxidase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutathione peroxidase activity","termid":"GO:1903282"},{"relation_name":"is_a","term_name":"negative regulation of peroxidase activity","termid":"GO:2000469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutathione peroxidase activity","synonyms":[{"name":"down regulation of GSH peroxidase activity","type":"exact"},{"name":"down regulation of glutathione peroxidase activity","type":"exact"},{"name":"down regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"down regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"down regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"down regulation of selenium-glutathione peroxidase activity","type":"exact"},{"name":"down-regulation of GSH peroxidase activity","type":"exact"},{"name":"down-regulation of glutathione peroxidase activity","type":"exact"},{"name":"down-regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"down-regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"down-regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"down-regulation of selenium-glutathione peroxidase activity","type":"exact"},{"name":"downregulation of GSH peroxidase activity","type":"exact"},{"name":"downregulation of glutathione peroxidase activity","type":"exact"},{"name":"downregulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"downregulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"downregulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"downregulation of selenium-glutathione peroxidase activity","type":"exact"},{"name":"inhibition of GSH peroxidase activity","type":"narrow"},{"name":"inhibition of glutathione peroxidase activity","type":"narrow"},{"name":"inhibition of glutathione:hydrogen-peroxide oxidoreductase activity","type":"narrow"},{"name":"inhibition of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"inhibition of reduced glutathione peroxidase activity","type":"narrow"},{"name":"inhibition of selenium-glutathione peroxidase activity","type":"narrow"},{"name":"negative regulation of GSH peroxidase activity","type":"exact"},{"name":"negative regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"negative regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"negative regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"negative regulation of selenium-glutathione peroxidase activity","type":"exact"}],"termid":"GO:1903283"}


id: PR:Q09130
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif213 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.09","synonyms":[{"name":"Spom972h-tif213","type":"exact"},{"name":"eIF-2-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09130"}


id: PATO:0001115
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001115 impulse value (obsolete PATO:0001115)","termid":"PATO:0001115"}


id: GO:0015154
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[91880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of disaccharide from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transmembrane transporter activity","termid":"GO:0015157"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"disaccharide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015154","terms_by_termid":{"GO:0005364":null,"GO:0008506":null}}


id: FYPO:0000255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in the cell nucleus is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PMID:12896976","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"},{"relation_name":"is_a","term_name":"abnormal nucleus","termid":"FYPO:0002403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0002403","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased nuclear protein level during vegetative growth","synonyms":[{"name":"increased nuclear protein level during mitotic cell cycle","type":"related"},{"name":"increased protein level in nucleus during vegetative growth","type":"exact"},{"name":"localization defects, nuclear accumulation of Pap1 and Sty1","type":"narrow"},{"name":"nuclear accumulation of Pap1 and Sty1","type":"narrow"},{"name":"nuclear accumulation of protein","type":"exact"},{"name":"nuclear protein accumulation during vegetative growth","type":"exact"}],"termid":"FYPO:0000255"}


id: FYPO:0006266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size of the fungal-type vacuole is normal (i.e. indistinguishable from wild type)..","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vacuolar morphology during vegetative growth","termid":"FYPO:0004247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuole size during vegetative growth","synonyms":[{"name":"normal vacuolar size during vegetative growth","type":"exact"},{"name":"normal vacuole size during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006266"}


id: PBO:0074429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 29","termid":"PBO:0074429"}


id: FYPO:0005176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ferric-chelate reductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal ferric-chelate reductase activity","termid":"FYPO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased ferric-chelate reductase activity","termid":"FYPO:0005176"}


id: GO:0018930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-methylquinoline, C10H9N, an aromatic compound composed of a benzene ring and a heterocyclic N-containing ring.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"3-methylquinoline metabolic process","secondary_identifiers":["UM-BBD_pathwayID:mqn"],"synonyms":[{"name":"3-methylquinoline metabolism","type":"exact"}],"termid":"GO:0018930"}


id: FYPO:0002606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at ribosomal DNA during S phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation at rDNA during vegetative growth","termid":"FYPO:0002604"},{"relation_name":"is_a","term_name":"increased protein phosphorylation during mitotic S phase","termid":"FYPO:0004353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at rDNA during mitotic S phase","synonyms":[{"name":"increased histone H2A phosphorylation at rDNA during mitotic S phase during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at ribosomal DNA during mitotic S phase","type":"exact"}],"termid":"FYPO:0002606"}


id: PBO:0047946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(16)(q22.1)","termid":"PBO:0047946"}


id: GO:1990576
data:
  {"annotated_genes":["SJAG_01699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111617],"is_not":false,"summary":null,"term":"GO:1990576"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular glucose molecule and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:15667320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled glucose receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G-protein coupled glucose receptor activity","type":"exact"}],"termid":"GO:1990576","terms_by_termid":{"GO:1990576":null}}


id: PBO:0066533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal G protein coupled receptor","termid":"PBO:0066533"}


id: PBO:0047745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 9","termid":"PBO:0047745"}


id: FYPO:0006785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cobalt ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0000139","FYPO:0002057","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on cobalt","synonyms":[{"name":"normal cell population growth in presence of cobalt","type":"exact"},{"name":"normal cell population growth on cobalt","type":"exact"},{"name":"normal cell population growth on cobalt ion","type":"exact"},{"name":"normal cellular response to cobalt","type":"related"},{"name":"normal growth on cobalt ions","type":"exact"},{"name":"normal vegetative cell population growth on cobalt","type":"exact"}],"termid":"FYPO:0006785"}


id: PBO:0066886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 186","termid":"PBO:0066886"}


id: PBO:0083661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) localized protein; involved in ER-associated protein degradation (ERAD), ER stress, and homeostasis; interacts with components of ERAD-L and ERAD-C and Cdc48p; derlin-like family member similar to Der1p","termid":"PBO:0083661"}


id: GO:0009323
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the transfer of an acetyl group to ribosomal-protein alanine, forming ribosomal-protein acetylalanine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ribosomal-protein-alanine N-acetyltransferase complex (obsolete GO:0009323)","termid":"GO:0009323"}


id: PBO:0002612
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YJR070C","termid":"PBO:0002612"}


id: GO:0110134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A biological process that results in the unequal transmission of alleles, haplotypes, or chromosomes from a parental genome to gametes. In the absence of meiotic drive, the two copies of each gene or chromosome in a diploid organism are transmitted to offspring with equal probability, whereas meiotic drive results in overrepresentation of the driving allele among the surviving products of meiosis.","definition_xrefs":["PMID:26920473","GOC:mah","PMID:29322557","PMID:29499907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":0,"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic drive","termid":"GO:0110134"}


id: PBO:0063058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITX2 adjacent non-coding RNA","termid":"PBO:0063058"}


id: PBO:0058307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4680","termid":"PBO:0058307"}


id: GO:0102896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (10E,12Z,15Z)-9-hydroperoxyoctadeca-10,12,15-trienoate = colnelenate + H2O.","definition_xrefs":["EC:4.2.1.121","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"colnelenate synthase activity","secondary_identifiers":["MetaCyc:RXN-8498","RHEA:28178"],"termid":"GO:0102896"}


id: GO:0031892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoactive intestinal polypeptide receptor binding","termid":"GO:0031890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 2 vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"type 2 vasoactive intestinal polypeptide receptor ligand","type":"narrow"},{"name":"type 3 PACAP receptor binding","type":"exact"}],"termid":"GO:0031892"}


id: PBO:0028150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_macromolecular_complex","termid":"PBO:0028150"}


id: GO:0031352
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid inner membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of plastid inner membrane (obsolete GO:0031352)","synonyms":[{"name":"intrinsic to plastid inner membrane","type":"narrow"}],"termid":"GO:0031352"}


id: GO:0060041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates.","definition_xrefs":["ISBN:0815340729","GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina development in camera-type eye","secondary_identifiers":["GO:0002073"],"synonyms":[{"name":"retina development in camera-style eye","type":"exact"},{"name":"retinal development","type":"related"}],"termid":"GO:0060041"}


id: GO:0050593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-N-methylcoclaurine + H+ + NADPH + O2 = (S)-3'-hydroxy-N-methylcoclaurine + H2O + NADP+.","definition_xrefs":["RHEA:16649","EC:1.14.14.102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-methylcoclaurine 3'-monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.13.71-RXN","KEGG_REACTION:R05732"],"synonyms":[{"name":"(S)-N-methylcoclaurine 3'-hydroxylase activity","type":"related"},{"name":"(S)-N-methylcoclaurine,NADPH:oxygen oxidoreductase (3'-hydroxylating)","type":"related"},{"name":"N-methylcoclaurine 3'-hydroxylase activity","type":"exact"},{"name":"cytochrome P450 80B1 activity","type":"related"}],"termid":"GO:0050593"}


id: PBO:0061953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 5","termid":"PBO:0061953"}


id: PBO:0089996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-succinyltransferase, e2 component of oxoglutarate dehydrogenase complex Kdg2","termid":"PBO:0089996"}


id: PBO:0033817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator Sak1","termid":"PBO:0033817"}


id: PBO:0072429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 3","termid":"PBO:0072429"}


id: GO:0018710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetone + ATP + CO2 + 2 H2O = acetoacetate + AMP + 4 H+ + 2 phosphate.","definition_xrefs":["EC:6.4.1.6","RHEA:18385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"acetone carboxylase activity","secondary_identifiers":["KEGG_REACTION:R05735","MetaCyc:6.4.1.6-RXN"],"synonyms":[{"name":"acetone:carbon-dioxide ligase (AMP-forming)","type":"related"}],"termid":"GO:0018710"}


id: PBO:0112846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 6-2","termid":"PBO:0112846"}


id: PBO:0091615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine acetyltransferase","termid":"PBO:0091615"}


id: PBO:0069263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 519, pseudogene","termid":"PBO:0069263"}


id: GO:0106184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of other compounds not included in EC:7.1 through EC:7.5 .","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocation activity acting on other compounds (obsolete GO:0106184)","secondary_identifiers":["EC:7.6.-.-"],"termid":"GO:0106184"}


id: GO:1902286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any semaphorin-plexin signaling pathway that is involved in dendrite guidance.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","PMID:22790009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semaphorin-plexin signaling pathway involved in neuron projection guidance","termid":"GO:1902285"},{"relation_name":"part_of","term_name":"dendrite guidance","termid":"GO:0070983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway involved in dendrite guidance","synonyms":[{"name":"semaphorin-plexin signaling pathway involved in dendritic guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in dendrite guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in dendritic guidance","type":"exact"}],"termid":"GO:1902286"}


id: PBO:0017960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ornithine transmembrane transporter Ort1 (predicted)","termid":"PBO:0017960"}


id: PBO:0005063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha Ef1a-a","termid":"PBO:0005063"}


id: PBO:0028638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiotic_spindle_absent_from_cell_during_meiosis_II","termid":"PBO:0028638"}


id: PBO:0049712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1","termid":"PBO:0049712"}


id: GO:1990843
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A mitochondrion that occurs adjacent to the sarcolemma in striated muscle cells and responds in distinct ways to physiological triggers.","definition_xrefs":["PMID:23297307","PMID:26039174"],"gene_count":0,"genotype_count":0,"name":"obsolete subsarcolemmal mitochondrion (obsolete GO:1990843)","synonyms":[{"name":"SS mitochondrion","type":"exact"},{"name":"SSM","type":"exact"}],"termid":"GO:1990843"}


id: PBO:0068439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 11, pseudogene","termid":"PBO:0068439"}


id: PBO:0062216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AM member 1 pseudogene","termid":"PBO:0062216"}


id: GO:1902766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a skeletal muscle satellite cell from one site to another. Migration of these cells is a key step in the process of growth and repair of skeletal muscle cells.","definition_xrefs":["PMID:17996437","PMID:19609936","GOC:TermGenie","GOC:mr","GO_REF:0000091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell migration","termid":"GO:1902766"}


id: GO:0010653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cell communication via chemical coupling. Cell communication by chemical coupling is the process that mediates signaling interactions between one cell and another cell by the transfer of small, water-soluble molecules or metabolites between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:kmv","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication by chemical coupling","termid":"GO:0010645"},{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"negatively_regulates","term_name":"cell communication by chemical coupling","termid":"GO:0010643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell communication by chemical coupling","termid":"GO:0010653"}


id: PBO:0086370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl alcohol dehydrogenase; localizes to cytosol; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance","termid":"PBO:0086370"}


id: PBO:0070986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 10","termid":"PBO:0070986"}


id: PBO:0042685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein zeta","termid":"PBO:0042685"}


id: PATO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in an bearer by virtue of how that bearer interacts with radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation quality","termid":"PATO:0001739"}


id: PBO:0043778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A4","termid":"PBO:0043778"}


id: GO:0061957
data:
  {"annotated_genes":["SJAG_03976","SJAG_01088","SJAG_00181"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101837,109408,110540],"is_not":false,"summary":null,"term":"GO:0061957"}]},"cv_name":"cellular_component","definition":"A protein complex that is capable of contributing to protein localization by the NVT pathway. In fission yeast, the Nvt complex consists of Ape2, Lap2 and Nbr1.","definition_xrefs":["PMID:26365378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_01088":null,"SJAG_03976":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NVT complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061957","terms_by_termid":{"GO:0061957":null}}


id: PBO:0027844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_G2_DNA_damage_checkpoint","termid":"PBO:0027844"}


id: PBO:0078071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 61 (non-functional)","termid":"PBO:0078071"}


id: PBO:0081118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 6 pseudogene 1","termid":"PBO:0081118"}


id: GO:0051381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to histamine, a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"histamine binding","termid":"GO:0051381"}


id: PBO:0057581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 885","termid":"PBO:0057581"}


id: GO:0031927
data:
  {"annotated_genes":["SJAG_03652","SJAG_02962","SJAG_03808","SJAG_02152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86266,86267,113552,114815],"is_not":false,"summary":null,"term":"GO:0031927"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyridoxamine from one side of a membrane to the other. Pyridoxamine, 4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol, is one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"pyridoxamine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031927","terms_by_termid":{"GO:0031927":null}}


id: GO:1990046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Merging of two or more mitochondria within a cell to form a single compartment, as a result of a disturbance in cellular homeostasis.","definition_xrefs":["GOC:lb","PMID:19360003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial fusion","termid":"GO:0008053"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"stress-induced mitochondrial fusion","synonyms":[{"name":"SIMH","type":"narrow"},{"name":"mitochondrial fusion in response to stress","type":"related"},{"name":"stress-induced mitochondrial hyperfusion","type":"narrow"}],"termid":"GO:1990046"}


id: PBO:0074835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 30","termid":"PBO:0074835"}


id: PBO:0031799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_G2/M_phase_transition","termid":"PBO:0031799"}


id: PR:Q9Y7M6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nop52 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7M6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.07","synonyms":[{"name":"Spom972h-nop52","type":"exact"}],"termid":"PR:Q9Y7M6"}


id: GO:0036057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized cell-cell junction found between the interdigitating foot processes of the glomerular epithelium (the podocytes) in the vertebrate kidney, which is adapted for facilitating glomerular filtration.","definition_xrefs":["PMID:19478094","PMID:12386277","GOC:mtg_kidney_jan10","GOC:rph","PMID:15994232","PMID:18971929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filtration diaphragm","termid":"GO:0036056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"slit diaphragm","termid":"GO:0036057"}


id: GO:0009999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into an auditory hair cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of inner ear auditory receptor cell fate specification","termid":"GO:0042669"},{"relation_name":"is_a","term_name":"negative regulation of inner ear auditory receptor cell differentiation","termid":"GO:0045608"},{"relation_name":"negatively_regulates","term_name":"auditory receptor cell fate specification","termid":"GO:0042667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of auditory receptor cell fate specification","synonyms":[{"name":"down regulation of auditory receptor cell fate specification","type":"exact"},{"name":"down-regulation of auditory receptor cell fate specification","type":"exact"},{"name":"downregulation of auditory receptor cell fate specification","type":"exact"},{"name":"inhibition of auditory receptor cell fate specification","type":"narrow"},{"name":"negative regulation of auditory hair cell fate specification","type":"exact"},{"name":"suppression of auditory receptor cell fate","type":"exact"},{"name":"suppression of hair cell fate","type":"exact"}],"termid":"GO:0009999"}


id: GO:0003351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of cilia of epithelial cells. Depending on the type of cell, there may be one or many cilia per cell. This movement is usually coordinated between many epithelial cells, and serves to move extracellular fluid.","definition_xrefs":["GOC:krc","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium movement","termid":"GO:0003341"},{"relation_name":"is_a","term_name":"extracellular transport","termid":"GO:0006858"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"epithelial cilium movement involved in extracellular fluid movement","synonyms":[{"name":"cilium movement involved in fluid flow","type":"related"},{"name":"epithelial cilium beating","type":"related"}],"termid":"GO:0003351"}


id: PBO:0062718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily P member 1 pseudogene","termid":"PBO:0062718"}


id: PBO:0048002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 4A","termid":"PBO:0048002"}


id: PBO:0076150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUFU negative regulator of hedgehog signaling","termid":"PBO:0076150"}


id: GO:0106400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A mechanism of homologous recombination and DNA repair in which transcript RNA is used as a template for DSB repair.","definition_xrefs":["PMID:25186730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"double-strand break repair via transcription-associated homologous recombination","termid":"GO:0106400"}


id: GO:1990243
data:
  {"annotated_genes":["SJAG_02311","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88839,104060],"is_not":false,"summary":null,"term":"GO:1990243"}]},"cv_name":"cellular_component","definition":"A heterodimeric transcription factor complex composed of the bZIP proteins atf1 and pcr1. The heterodimer binds m26 sites (homologous to CRE).","definition_xrefs":["PMID:24224056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor AP-1 complex","termid":"GO:0035976"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"atf1-pcr1 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990243","terms_by_termid":{"GO:1990243":null}}


id: GO:0098650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a peptidyl-proline 4-dioxygenase.","definition_xrefs":["GOC:dos","GOC:kvm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"peptidyl-proline 4-dioxygenase binding","termid":"GO:0098650"}


id: FYPO:0007539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the threonine residue at position 4 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30282034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain threonine 4 residues during vegetative growth","synonyms":[{"name":"normal phosphorylation of RNA polymerase II C-terminal domain threonine 4 residues during mitotic cell cycle","type":"related"},{"name":"normal phosphorylation of RNA polymerase II CTD threonine 4 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0007539"}


id: GO:0019758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of glycosinolates, substituted thioglycosides found in rapeseed products and related cruciferae.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete glycosinolate biosynthetic process (obsolete GO:0019758)","synonyms":[{"name":"glycosinolate anabolism","type":"exact"},{"name":"glycosinolate biosynthesis","type":"exact"},{"name":"glycosinolate formation","type":"exact"},{"name":"glycosinolate synthesis","type":"exact"}],"termid":"GO:0019758"}


id: PBO:0035983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_phosphorylation_during_vegetative_growth","termid":"PBO:0035983"}


id: _global:evidence_for_feature
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"B is evidence_for_feature A, if an instance of B supports the existence of A.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evidence_for_feature","termid":"_global:evidence_for_feature"}


id: PBO:0072356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 42","termid":"PBO:0072356"}


id: PBO:0087533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Nup84p subcomplex of nuclear pore complex (NPC); contributes to nucleocytoplasmic transport, NPC biogenesis; is involved in establishment of a normal nucleocytoplasmic concentration gradient of GTPase Gsp1p; also plays roles in several processes that may require localization of genes or chromosomes at nuclear periphery, including double-strand break repair, transcription and chromatin silencing; relocalizes to cytosol in response to hypoxia; homolog of human NUP133","termid":"PBO:0087533"}


id: PBO:0064989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRC1 antisense RNA 1","termid":"PBO:0064989"}


id: MOD:01045
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3',5'-dichloro-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichlorinated tyrosine","termid":"MOD:01037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-dichloro-L-tyrosine","synonyms":[{"name":"3',5'-Cl2Tyr","type":"exact"}],"termid":"MOD:01045"}


id: PBO:0091096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Dhm2","termid":"PBO:0091096"}


id: PBO:0081297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 77","termid":"PBO:0081297"}


id: GO:0010399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the alternating alpha-(1->2)-linked rhamnose and alpha-(1->2)-linked B-galacturonic acid residues of the rhamnogalacturonan I backbone.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan I metabolic process","termid":"GO:0010395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"rhamnogalacturonan I backbone metabolic process","synonyms":[{"name":"rhamnogalacturonan I backbone metabolism","type":"exact"}],"termid":"GO:0010399"}


id: PBO:0027155
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_glutamine_level","termid":"PBO:0027155"}


id: GO:0052907
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91296],"is_not":false,"summary":null,"term":"GO:0052907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + adenine(1618) in 23S rRNA = S-adenosyl-L-homocysteine + rRNA containing N(6)-methyladenine(1618) in 23S rRNA.","definition_xrefs":["RHEA:16497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine-N6-)-methyltransferase activity","termid":"GO:0008988"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0140098","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"23S rRNA (adenine(1618)-N(6))-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.181","KEGG_REACTION:R07232","MetaCyc:RXN-11596"],"synonyms":[{"name":"M(6)A(1618) activity","type":"broad"},{"name":"rRNA large subunit methyltransferase F activity","type":"related"}],"termid":"GO:0052907","terms_by_termid":{"GO:0052907":null}}


id: PBO:0029355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_centromere","termid":"PBO:0029355"}


id: FYPO:0004251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the extent of DNA resection upstream of a stalled replication fork is greater than normal. DNA resection is the 5'-to-3' degradation of one strand of DNA, leaving a stretch of single-stranded DNA.","definition_xrefs":["PMID:24806966","PomBase:mah","PMID:20051983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased DNA resection during replication fork processing","synonyms":[{"name":"increased DNA resection during replication fork processing during mitotic cell cycle","type":"related"},{"name":"increased DNA resection during replication fork processing during vegetative growth","type":"exact"},{"name":"increased DNA resectioning during replication fork processing","type":"exact"},{"name":"increased extent of DNA resection during replication fork processing","type":"exact"},{"name":"increased extent of exonucleolytic DNA cleavage during replication fork processing","type":"exact"}],"termid":"FYPO:0004251"}


id: PBO:0060068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 15","termid":"PBO:0060068"}


id: GO:1900556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of emericellamide.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"},{"relation_name":"is_a","term_name":"depsipeptide catabolic process","termid":"GO:0050762"},{"relation_name":"is_a","term_name":"lactam catabolic process","termid":"GO:0072340"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"emericellamide metabolic process","termid":"GO:1900555"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"emericellamide catabolic process","synonyms":[{"name":"emericellamide breakdown","type":"exact"},{"name":"emericellamide catabolism","type":"exact"},{"name":"emericellamide degradation","type":"exact"}],"termid":"GO:1900556"}


id: PBO:0089985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase Otg2","termid":"PBO:0089985"}


id: GO:0043430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-decaprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-decaprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:jl","PMID:11583838"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-decaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity (obsolete GO:0043430)","synonyms":[{"name":"2-decaprenyl-6-methoxy-1,4-benzoquinone methylase activity","type":"exact"}],"termid":"GO:0043430"}


id: PBO:0084820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; YBR230W-A has a paralog, COQ8, that arose from the whole genome duplication","termid":"PBO:0084820"}


id: MOD:01659
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 1-amino-4-{[3-(ethenylsulfonyl)phenyl]amino}-9,10-dioxo-9,10-dihydroanthracene-2-sulfonate, Uniblue A.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uniblue A derivatized residue","synonyms":[{"name":"1-amino-4-{[3-(ethenylsulfonyl)phenyl]amino}-9,10-dioxo-9,10-dihydroanthracene-2-sulfonic acid","type":"exact"},{"name":"1-amino-9,10-dioxo-4-{[3-(vinylsulfonyl)phenyl]amino}-9,10-dihydroanthracene-2-sulfonic acid","type":"exact"},{"name":"Uniblue A","type":"exact"},{"name":"UniblueARes","type":"exact"}],"termid":"MOD:01659"}


id: PBO:0088619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk31","termid":"PBO:0088619"}


id: GO:0070013
data:
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id: GO:0034680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha10 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"integrin alpha10-beta1 complex","synonyms":[{"name":"ITGA10-ITGB1 complex","type":"narrow"},{"name":"alpha10-beta1 integrin complex","type":"exact"}],"termid":"GO:0034680"}


id: GO:0102386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phenylethanol + NADP = phenylacetaldehyde + NADPH + H+.","definition_xrefs":["PMID:17644147","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"phenylacetaldehyde reductase activity","secondary_identifiers":["MetaCyc:RXN-13536"],"termid":"GO:0102386"}


id: PBO:0041881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CATR tumorigenicity conversion 1","termid":"PBO:0041881"}


id: GO:0048344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a paraxial mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"paraxial mesodermal cell fate commitment","termid":"GO:0048343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell fate determination","termid":"GO:0048344"}


id: FYPO:0007055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which  endosome organization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0007032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal endosome organization","synonyms":[{"name":"during vegetative growth during mitotic cell cycle","type":"related"},{"name":"normal endosome organisation","type":"exact"},{"name":"normal endosome organization during vegetative growth","type":"exact"}],"termid":"FYPO:0007055"}


id: PBO:0055506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2940","termid":"PBO:0055506"}


id: PBO:0065419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 6","termid":"PBO:0065419"}


id: GO:0120137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency or rate of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity.","definition_xrefs":["PMID:23407971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","termid":"GO:0062002"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","termid":"GO:0120137"}


id: PBO:0058654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6782","termid":"PBO:0058654"}


id: PBO:0071358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 17","termid":"PBO:0071358"}


id: PBO:0087794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sumo-like domain protein; prevents accumulation of toxic intermediates during replication-associated recombinational repair; roles in silencing, lifespan, chromatid cohesion and the intra-S-phase DNA damage checkpoint; RENi family member","termid":"PBO:0087794"}


id: GO:0098778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The secretion of soluble curli subunits through the outer membrane, coupled to nucleation of curli fiber formation at the membrane surface.","definition_xrefs":["PMID:24080089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion by the type VIII secretion system","termid":"GO:0098777"},{"relation_name":"part_of","term_name":"curli assembly","termid":"GO:0098775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0044085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"curli subunit secretion coupled to curli assembly","synonyms":[{"name":"extracellular nucleation-precipitation pathway","type":"exact"}],"termid":"GO:0098778"}


id: GO:0009574
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense band of microtubules, 1-3 pm wide, that appears just beneath the cell membrane before the start of cell division in the cells of higher plants. It precedes the onset of prophase and then disappears as mitosis begins, yet it somehow determines the plane of orientation of the new cell plate forming in late telophase and marks the zone of the parental cell wall where fusion with the growing cell plate ultimately occurs.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0015630"],"is_obsolete":false,"name":"preprophase band","secondary_identifiers":["Wikipedia:Preprophase_band"],"termid":"GO:0009574"}


id: GO:1900465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cellular arginine catabolic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:19233144","GOC:dgf","GOC:TermGenie","PMID:8455631"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of arginine catabolic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900465)","synonyms":[{"name":"negative regulation of arginine breakdown by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of arginine catabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of arginine degradation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900465"}


id: MOD:00550
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EAPTA d0","synonyms":[{"name":"EAPTA d0","type":"related"},{"name":"EQAT","type":"related"}],"termid":"MOD:00550"}


id: PBO:0086904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative type-1 protein phosphatase targeting subunit; tethers Glc7p type-1 protein phosphatase to Gsy2p glycogen synthase; PIG2 has a paralog, GIP2, that arose from the whole genome duplication","termid":"PBO:0086904"}


id: PBO:0073412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 16","termid":"PBO:0073412"}


id: PBO:0058781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7150","termid":"PBO:0058781"}


id: PBO:0041434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C9","termid":"PBO:0041434"}


id: PBO:0046214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 7","termid":"PBO:0046214"}


id: PBO:0028244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_SRP-dependent_cotranslational_protein_targeting_to_membrane","termid":"PBO:0028244"}


id: GO:1902656
data:
  {"annotated_genes":["SJAG_04668","SJAG_05229","SJAG_03631","SJAG_04551","SJAG_01090","SJAG_02877","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95728,88443,110529,88496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[87320,109461],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[98249],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"The directed movement of calcium ion into a cytosol.","definition_xrefs":["GO_REF:0000075","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_02877":null,"SJAG_03631":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"calcium ion import into cytosol","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcium import into cytosol","type":"broad"}],"termid":"GO:1902656","terms_by_termid":{"GO:0098703":null,"GO:1905665":null,"GO:1905949":null}}


id: PBO:0053935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1234","termid":"PBO:0053935"}


id: PBO:0044342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 26","termid":"PBO:0044342"}


id: FYPO:0004221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H4-K20 dimethylation during vegetative growth","synonyms":[{"name":"normal histone H4 K20 dimethylation during vegetative growth","type":"exact"},{"name":"normal histone H4-K20 dimethylation during mitotic cell cycle","type":"related"},{"name":"normal histone H4K20me2 during vegetative growth","type":"exact"},{"name":"normal histone lysine H4 K20 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004221"}


id: PBO:0084250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine monophosphate dehydrogenase; catalyzes the rate-limiting step in the de novo synthesis of GTP; member of a four-gene family in S. cerevisiae, constitutively expressed; IMD4 has a paralog, IMD3, that arose from the whole genome duplication","termid":"PBO:0084250"}


id: PBO:0075069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 118","termid":"PBO:0075069"}


id: PBO:0042227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y","termid":"PBO:0042227"}


id: PR:Q7Z9I5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z9I5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.05","synonyms":[{"name":"Spom972h-wtf7","type":"exact"}],"termid":"PR:Q7Z9I5"}


id: PBO:0081353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 175","termid":"PBO:0081353"}


id: PBO:0048043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin","termid":"PBO:0048043"}


id: PBO:0063276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 2","termid":"PBO:0063276"}


id: GO:0032680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tumor necrosis factor production.","definition_xrefs":["GOC:mah","PMID:10891884","PMID:15560120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"tumor necrosis factor production","termid":"GO:0032640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of tumor necrosis factor production","secondary_identifiers":["GO:1904467","GO:0042534"],"synonyms":[{"name":"regulation of TNF production","type":"exact"},{"name":"regulation of TNF-alpha production","type":"exact"},{"name":"regulation of cachectin production","type":"exact"},{"name":"regulation of tumor necrosis factor biosynthetic process","type":"narrow"},{"name":"regulation of tumor necrosis factor secretion","type":"narrow"},{"name":"regulation of tumor necrosis factor-alpha production","type":"exact"}],"termid":"GO:0032680"}


id: GO:1900463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cellular response to alkalinity by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:12509465","GOC:dgf","GOC:TermGenie","PMID:17023428"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular response to alkaline pH by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900463)","synonyms":[{"name":"negative regulation of cellular response to alkalinity by negative regulation of transcription from RNA polymerase II promoter","type":"broad"},{"name":"negative regulation of cellular response to basic pH by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900463"}


id: GO:0031568
data:
  {"annotated_genes":["SJAG_03048","SJAG_03681","SJAG_01210","SJAG_01401","SJAG_00071"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85072,97721,98465,104984,111993],"is_not":false,"summary":null,"term":"GO:0031568"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint during the G1/S transition of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell size control checkpoint signaling","termid":"GO:0031567"},{"relation_name":"is_a","term_name":"negative regulation of G1/S transition of mitotic cell cycle","termid":"GO:2000134"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_03048":null,"SJAG_03681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049","GO:0044772"],"is_obsolete":false,"name":"mitotic G1 cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072450"],"synonyms":[{"name":"G1 cell size control checkpoint","type":"related"},{"name":"G1 cell size control checkpoint signalling","type":"related"},{"name":"mitotic G1 cell size control checkpoint","type":"exact"},{"name":"mitotic cell cycle G1/S transition size control checkpoint","type":"exact"},{"name":"signal transduction involved in G1 cell size control checkpoint","type":"related"},{"name":"signal transduction involved in mitotic cell cycle G1/S transition size control checkpoint","type":"related"}],"termid":"GO:0031568","terms_by_termid":{"GO:0031568":null}}


id: PBO:0059191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRGPRF antisense RNA 1","termid":"PBO:0059191"}


id: PR:O14369
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 4B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein sce3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.04c","secondary_identifiers":["UniProtKB:O14369"],"synonyms":[{"name":"Spom972h-EIF4B","type":"exact"}],"termid":"PR:O14369"}


id: PBO:0070427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase pseudogene 5","termid":"PBO:0070427"}


id: PBO:0034168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_between-species_paralogy_relationship_with","termid":"PBO:0034168"}


id: GO:1905400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of activated CD4-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["GO_REF:0000058","PMID:24187568","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905399"},{"relation_name":"negatively_regulates","term_name":"activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activated CD4-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"down regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"inhibition of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905400"}


id: GO:0001797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type IIa hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IIa hypersensitivity","termid":"GO:0001796"},{"relation_name":"is_a","term_name":"negative regulation of type II hypersensitivity","termid":"GO:0002893"},{"relation_name":"negatively_regulates","term_name":"type IIa hypersensitivity","termid":"GO:0001794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IIa hypersensitivity","synonyms":[{"name":"down regulation of type IIa hypersensitivity","type":"exact"},{"name":"down-regulation of type IIa hypersensitivity","type":"exact"},{"name":"downregulation of type IIa hypersensitivity","type":"exact"},{"name":"inhibition of type IIa hypersensitivity","type":"narrow"}],"termid":"GO:0001797"}


id: PBO:0088772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit Iss1","termid":"PBO:0088772"}


id: GO:0005490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome b that has a sulfur atom ligated to the iron of the prosthetic group (heme-thiolate); enzymes:typically monooxygenases acting on lipophilic substrates.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome P450 (obsolete GO:0005490)","synonyms":[{"name":"cytochrome P450","type":"exact"}],"termid":"GO:0005490"}


id: GO:0046164
data:
  {"annotated_genes":["SJAG_04954","SJAG_03786","SJAG_00237","SJAG_04870","SJAG_04320","SJAG_00244","SJAG_04048","SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[96968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006068"},{"annotations":[89153,112450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[84742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[84848,111135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[60920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"},{"annotations":[101129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_03786":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null,"SJAG_04870":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"alcohol catabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"alcohol breakdown","type":"exact"},{"name":"alcohol catabolism","type":"exact"},{"name":"alcohol degradation","type":"exact"}],"termid":"GO:0046164","terms_by_termid":{"GO:0006062":null,"GO:0006068":null,"GO:0016095":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null,"GO:0071545":null}}


id: RO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has potential to directly develop into y iff x directly develops into y or x is capable of directly developing into y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_potential_to_develop_into","termid":"RO:0002387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_potential_to_directly_develop_into","termid":"RO:0002388"}


id: FYPO:0004232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which methylated histone binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal methylated histone binding","termid":"FYPO:0004231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished methylated histone binding","synonyms":[{"name":"methylated histone binding abolished","type":"exact"}],"termid":"FYPO:0004232"}


id: GO:0034864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethylpentanal + H2O = 2,4,4-trimethylpentanoate + 3 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethylpentanal dehydrogenase activity (obsolete GO:0034864)","termid":"GO:0034864"}


id: PBO:0059018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 7","termid":"PBO:0059018"}


id: GO:0072590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acetyl-L-aspartate + L-glutamate = ADP + phosphate + N-acetylaspartyl-glutamate.","definition_xrefs":["PMID:20657015","PMID:20643647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"N-acetyl-L-aspartate-L-glutamate ligase activity","secondary_identifiers":["Reactome:R-HSA-8942575"],"termid":"GO:0072590"}


id: PBO:0005478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine induced death protein Cid2","termid":"PBO:0005478"}


id: FYPO:0005857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of antisense RNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total antisense RNA or a specific antisense RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"altered antisense RNA level during vegetative growth","synonyms":[{"name":"abnormal antisense RNA level during vegetative growth","type":"exact"},{"name":"altered antisense RNA level during mitotic cell cycle","type":"related"},{"name":"altered antisense RNA transcript level during vegetative growth","type":"exact"},{"name":"altered cellular antisense RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0005857"}


id: PBO:0018104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name description Alpha Amylase Homolog","termid":"PBO:0018104"}


id: PBO:0046782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EYA2 antisense RNA 1","termid":"PBO:0046782"}


id: PBO:0029351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hydroxyurea","termid":"PBO:0029351"}


id: GO:0046598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the introduction of viral entry into the host cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral entry into host cell","termid":"GO:0046596"},{"relation_name":"is_a","term_name":"positive regulation by symbiont of entry into host","termid":"GO:0075294"},{"relation_name":"is_a","term_name":"positive regulation of viral life cycle","termid":"GO:1903902"},{"relation_name":"positively_regulates","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral entry into host cell","synonyms":[{"name":"positive regulation of viral penetration into host cell","type":"exact"}],"termid":"GO:0046598"}


id: PBO:0066178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 4","termid":"PBO:0066178"}


id: GO:0098964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a messenger ribonucleoprotein complex along microtubules in nerve cell dendrites towards the postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde dendritic transport","termid":"GO:0098937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"anterograde dendritic transport of messenger ribonucleoprotein complex","synonyms":[{"name":"anterograde dendritic transport of mRNA RNP complex","type":"exact"}],"termid":"GO:0098964"}


id: PR:Q9P7C0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar RNA-interacting protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01388","PANTHER:PTHR19865:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C2E1P5.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P5.05","secondary_identifiers":["UniProtKB:Q9P7C0"],"synonyms":[{"name":"Spom972h-RRP9","type":"exact"}],"termid":"PR:Q9P7C0"}


id: GO:0046900
data:
  {"annotated_genes":["SJAG_00529","SJAG_03224"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89030,100839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrahydrofolylpolyglutamate, a folate derivative comprising tetrahydrofolate attached to a chain of glutamate residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_03224":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrahydrofolylpolyglutamate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tetrahydrofolyl-[Glu](n) metabolic process","type":"exact"},{"name":"tetrahydrofolyl-[Glu](n) metabolism","type":"exact"},{"name":"tetrahydrofolylpolyglutamate metabolism","type":"exact"}],"termid":"GO:0046900","terms_by_termid":{"GO:0046901":null}}


id: PBO:0031570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_septation_index","termid":"PBO:0031570"}


id: PBO:0056682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEFV innate immunity regulator, pyrin","termid":"PBO:0056682"}


id: GO:0051905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a pigment granule to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"},{"relation_name":"part_of","term_name":"pigment granule localization","termid":"GO:0051875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of pigment granule localization","synonyms":[{"name":"establishment of pigment granule localisation","type":"exact"}],"termid":"GO:0051905"}


id: GO:0000472
data:
  {"annotated_genes":["SJAG_02250","SJAG_00772","SJAG_04224","SJAG_04524"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95916,103719,105102,111288],"is_not":false,"summary":null,"term":"GO:0000472"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage between the 5'-External Transcribed Spacer (5'-ETS) and the 5' end of the SSU-rRNA of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript, to produce the mature end of the SSU-rRNA.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"is_a","term_name":"rRNA 5'-end processing","termid":"GO:0000967"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00772":null,"SJAG_02250":null,"SJAG_04224":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endonucleolytic cleavage at A1","type":"narrow"}],"termid":"GO:0000472","terms_by_termid":{"GO:0000472":null}}


id: PBO:0091607
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Important For Sex","termid":"PBO:0091607"}


id: MOD:01889
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(2-succinyl)-L-cysteine, by addition of either fumaric acid or maleic acid.","definition_xrefs":["PubMed:20677745","RESID:AA0561","Unimod:957","PubMed:16624247","PubMed:18448829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylated residue","termid":"MOD:00001"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-succinyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(1R)-1,2-dicarboxyethyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(2R)-2-{[(2R)-2-amino-2-carboxyethyl]sulfanyl}butanedioic acid","type":"exact"},{"name":"2-((2-amino-2-carboxyethyl)thio)butanedioic acid","type":"exact"},{"name":"2-amino-3-(1,2-dicarboxyethylthio)propanoic acid","type":"exact"},{"name":"MOD_RES S-(2-succinyl)cysteine","type":"exact"},{"name":"S-(1,2-dicarboxyethyl)cysteine","type":"exact"},{"name":"S-(2-succinyl)-L-cysteine","type":"exact"},{"name":"S-(2-succinyl)cysteine","type":"exact"},{"name":"S-[(2R)-2-succinyl]-L-cysteine","type":"exact"}],"termid":"MOD:01889"}


id: PBO:0064453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-fucosyltransferase 2","termid":"PBO:0064453"}


id: GO:0043354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for an enucleate erythrocyte to attain its fully functional state. An enucleate erythrocyte is an erythrocyte without a nucleus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte maturation","termid":"GO:0043249"},{"relation_name":"part_of","term_name":"enucleate erythrocyte development","termid":"GO:0048822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enucleate erythrocyte maturation","synonyms":[{"name":"enucleate RBC maturation","type":"exact"},{"name":"enucleate red blood cell maturation","type":"exact"}],"termid":"GO:0043354"}


id: PBO:0068485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 67, pseudogene","termid":"PBO:0068485"}


id: GO:0043303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome localization","termid":"GO:0032418"},{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"},{"relation_name":"part_of","term_name":"mast cell activation involved in immune response","termid":"GO:0002279"},{"relation_name":"part_of","term_name":"mast cell mediated immunity","termid":"GO:0002448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"mast cell degranulation","synonyms":[{"name":"mast cell granule exocytosis","type":"exact"}],"termid":"GO:0043303"}


id: PBO:0001964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Nop9 (predicted)","termid":"PBO:0001964"}


id: GO:2000193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fatty acid transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"regulation of fatty acid transport","termid":"GO:2000191"},{"relation_name":"positively_regulates","term_name":"fatty acid transport","termid":"GO:0015908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of fatty acid transport","termid":"GO:2000193"}


id: PBO:0026953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_equatorial_microtubule_organizing_center_during_vegetative_growth","termid":"PBO:0026953"}


id: PBO:0040458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase 13A1","termid":"PBO:0040458"}


id: PBO:0074261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO4A1 antisense RNA 2","termid":"PBO:0074261"}


id: MOD:00505
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:15456300","Unimod:136","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzoyl labeling reagent light form (N-term and K)","synonyms":[{"name":"Benzoyl","type":"related"},{"name":"Benzoyl (Bz)","type":"exact"},{"name":"labeling reagent light form (N-term & K)","type":"related"}],"termid":"MOD:00505"}


id: GO:0005191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete acidic epididymal glycoprotein (obsolete GO:0005191)","synonyms":[{"name":"acidic epididymal glycoprotein","type":"exact"}],"termid":"GO:0005191"}


id: GO:0006303
data:
  {"annotated_genes":["SJAG_01677","SJAG_05373","SJAG_04372","SJAG_04199","SJAG_00823","SJAG_00441","SJAG_16460","SJAG_02527","SJAG_02237","SJAG_01076","SJAG_03048","SJAG_05372","SJAG_00640"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84678,85286,91983,96034,101108,107039,107823,110377,112423,112894],"is_not":false,"summary":null,"term":"GO:0006303"},{"annotations":[112422,109994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097680"},{"annotations":[91985],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061674"},{"annotations":[98471],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001033"},{"annotations":[103502],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends. This term covers instances of separate pathways, called classical (or canonical) and alternative nonhomologous end joining (C-NHEJ and A-NHEJ). These in turn may further branch into sub-pathways, but evidence is still unclear.","definition_xrefs":["PMID:10827453","PMID:24837021","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_00640":null,"SJAG_00823":null,"SJAG_01076":null,"SJAG_01677":null,"SJAG_02237":null,"SJAG_02527":null,"SJAG_03048":null,"SJAG_04199":null,"SJAG_04372":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NHEJ","type":"exact"}],"termid":"GO:0006303","terms_by_termid":{"GO:0006303":null,"GO:0061674":null,"GO:0097680":null,"GO:2001033":null,"GO:2001034":null}}


id: GO:0160105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine(22) in tRNA + S-adenosyl-L-methionine = H+ + N(1)-methyladenosine(22) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0140101","GO:0003674","GO:0016740","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"tRNA (adenine(22)-N1)-methyltransferase activity","secondary_identifiers":["RHEA:43144"],"synonyms":[{"name":"tRNA (adenine(22)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (adenosine(22)-N(1))-methyltransferase activity","type":"exact"}],"termid":"GO:0160105"}


id: GO:0089708
data:
  {"annotated_genes":["SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93473],"is_not":false,"summary":null,"term":"GO:0089708"}]},"cv_name":"biological_process","definition":"The directed movement of L-histidine out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"L-histidine transmembrane transport","termid":"GO:0089709"},{"relation_name":"is_a","term_name":"L-histidine transport","termid":"GO:1902024"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transport","termid":"GO:1990822"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"L-histidine transmembrane export from vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0089708","terms_by_termid":{"GO:0089708":null}}


id: GO:1901713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of urea catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide catabolic process","termid":"GO:0034252"},{"relation_name":"is_a","term_name":"regulation of urea catabolic process","termid":"GO:0034254"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of nitrogen cycle metabolic process","termid":"GO:1903315"},{"relation_name":"negatively_regulates","term_name":"urea catabolic process","termid":"GO:0043419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"negatively_regulates","termid":"GO:0071941"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0071941"],"is_obsolete":false,"name":"negative regulation of urea catabolic process","synonyms":[{"name":"down regulation of urea breakdown","type":"exact"},{"name":"down regulation of urea catabolic process","type":"exact"},{"name":"down regulation of urea catabolism","type":"exact"},{"name":"down regulation of urea decomposition","type":"exact"},{"name":"down regulation of urea degradation","type":"exact"},{"name":"down-regulation of urea breakdown","type":"exact"},{"name":"down-regulation of urea catabolic process","type":"exact"},{"name":"down-regulation of urea catabolism","type":"exact"},{"name":"down-regulation of urea decomposition","type":"exact"},{"name":"down-regulation of urea degradation","type":"exact"},{"name":"downregulation of urea breakdown","type":"exact"},{"name":"downregulation of urea catabolic process","type":"exact"},{"name":"downregulation of urea catabolism","type":"exact"},{"name":"downregulation of urea decomposition","type":"exact"},{"name":"downregulation of urea degradation","type":"exact"},{"name":"inhibition of urea breakdown","type":"exact"},{"name":"inhibition of urea catabolic process","type":"narrow"},{"name":"inhibition of urea catabolism","type":"exact"},{"name":"inhibition of urea decomposition","type":"exact"},{"name":"inhibition of urea degradation","type":"exact"},{"name":"negative regulation of urea breakdown","type":"exact"},{"name":"negative regulation of urea catabolism","type":"exact"},{"name":"negative regulation of urea decomposition","type":"exact"},{"name":"negative regulation of urea degradation","type":"exact"}],"termid":"GO:1901713"}


id: PBO:0075968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 8","termid":"PBO:0075968"}


id: PBO:0069391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 651, pseudogene","termid":"PBO:0069391"}


id: GO:1904978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endosome organization.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:pad","PMID:22511594","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"endosome organization","termid":"GO:0007032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endosome organization","synonyms":[{"name":"regulation of endosome organisation","type":"exact"},{"name":"regulation of endosome organization and biogenesis","type":"related"}],"termid":"GO:1904978"}


id: GO:2001159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization by the Cvt pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"is_a","term_name":"regulation of protein targeting","termid":"GO:1903533"},{"relation_name":"regulates","term_name":"cytoplasm to vacuole targeting by the Cvt pathway","termid":"GO:0032258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006605","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization by the Cvt pathway","synonyms":[{"name":"regulation of cytoplasm to vacuole targeting","type":"exact"},{"name":"regulation of cytoplasm-to-vacuole targeting","type":"exact"}],"termid":"GO:2001159"}


id: PBO:0051123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-1 (pseudogene)","termid":"PBO:0051123"}


id: PBO:0045650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 8","termid":"PBO:0045650"}


id: PBO:0052549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor C2","termid":"PBO:0052549"}


id: PBO:0013100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein Lrp1","termid":"PBO:0013100"}


id: PBO:0031489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_mitotic_spindle","termid":"PBO:0031489"}


id: PBO:0051315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-108 (non-functional)","termid":"PBO:0051315"}


id: GO:1904556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-tryptophan across a membrane.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan transport","termid":"GO:0015827"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"L-tryptophan transmembrane transport","termid":"GO:1904556"}


id: PR:O94396
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pus1 gene.","definition_xrefs":["UniProtKB:O94396","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.03","synonyms":[{"name":"Spom972h-pus1","type":"exact"},{"name":"tRNA pseudouridylate synthase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-uridine isomerase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94396"}


id: PBO:0089253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd3b","termid":"PBO:0089253"}


id: PBO:0017619
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Stress Seventy","termid":"PBO:0017619"}


id: PBO:0046063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 2","termid":"PBO:0046063"}


id: PR:P37818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An arginase-2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase Car1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP26C9.02c","secondary_identifiers":["UniProtKB:P37818"],"synonyms":[{"name":"SPBP26C9.02c","type":"related"},{"name":"Spom972h-ARG2","type":"exact"}],"termid":"PR:P37818"}


id: PBO:0089061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein, possibly be part of SJAG_01450","termid":"PBO:0089061"}


id: GO:2000618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H4-K16 acetylation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H4-K16 acetylation (obsolete GO:2000618)","synonyms":[{"name":"regulation of histone H4 acetylation at K16","type":"exact"}],"termid":"GO:2000618"}


id: PBO:0075213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin gamma 1","termid":"PBO:0075213"}


id: GO:0110112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of lipid transporter activity.","definition_xrefs":["PMID:27365390","GOC:rph","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of transporter activity","termid":"GO:0032409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of lipid transporter activity","termid":"GO:0110112"}


id: PBO:0057685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1273h","termid":"PBO:0057685"}


id: MOD:02044
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-cysteine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-cysteine residue","synonyms":[{"name":"XlnkCys","type":"exact"}],"termid":"MOD:02044"}


id: PBO:0061930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily K member 1","termid":"PBO:0061930"}


id: PBO:0038957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipogenesis regulatory factor","termid":"PBO:0038957"}


id: PBO:0042837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 36","termid":"PBO:0042837"}


id: PBO:0053791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1044","termid":"PBO:0053791"}


id: GO:0047579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-4-hydroxymandelate + H+ + O2 = 4-hydroxybenzaldehyde + CO2 + H2O2.","definition_xrefs":["EC:1.1.3.19","RHEA:15833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-hydroxymandelate oxidase activity","secondary_identifiers":["MetaCyc:4-HYDROXYMANDELATE-OXIDASE-RXN","KEGG_REACTION:R02673"],"synonyms":[{"name":"(S)-2-hydroxy-2-(4-hydroxyphenyl)acetate:oxygen 1-oxidoreductase activity","type":"related"},{"name":"L-4-hydroxymandelate oxidase (decarboxylating)","type":"related"}],"termid":"GO:0047579"}


id: PBO:0056742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meteorin like, glial cell differentiation regulator","termid":"PBO:0056742"}


id: GO:2001311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a lysobisphosphatidic acid. A lysobisphosphatidic acid is a lysophosphatidic acid having the unusual property of a phosphodiester moiety linked to positions sn-1 and sn1' of glycerol; and two additional fatty acids esterified to the glycerol head group.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"},{"relation_name":"is_a","term_name":"alditol phosphate metabolic process","termid":"GO:0052646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lysobisphosphatidic acid metabolic process","synonyms":[{"name":"LBPA metabolic process","type":"exact"},{"name":"LBPA metabolism","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate (BMP) metabolic process","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate (BMP) metabolism","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate metabolic process","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate metabolism","type":"exact"},{"name":"lysobisphosphatidic acid metabolism","type":"exact"}],"termid":"GO:2001311"}


id: PBO:0077820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53RK divergent transcript","termid":"PBO:0077820"}


id: PBO:0065412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 1","termid":"PBO:0065412"}


id: PBO:0026927
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_serine_phosphorylation","termid":"PBO:0026927"}


id: GO:0018133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl cysteine cross-link by the condensation of a serine hydroxyl with the carbonyl of the preceding residue.","definition_xrefs":["RESID:AA0239"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteine oxazolinecarboxylic acid (obsolete GO:0018133)","termid":"GO:0018133"}


id: PBO:0088770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon gamma subunit Sss1","termid":"PBO:0088770"}


id: GO:0090527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of actin filaments.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete actin filament reorganization (obsolete GO:0090527)","termid":"GO:0090527"}


id: PBO:0045044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 4","termid":"PBO:0045044"}


id: PBO:0038345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_active_in","termid":"PBO:0038345"}


id: GO:0048866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a stem cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:isa_complete","CL:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"stem cell fate commitment","termid":"GO:0048865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell fate specification","termid":"GO:0048866"}


id: PBO:0004897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ku domain protein Pku80","termid":"PBO:0004897"}


id: GO:0003921
data:
  {"annotated_genes":["SJAG_04634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97295],"is_not":false,"summary":null,"term":"GO:0003921"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + XMP + NH4(+) = AMP + diphosphate + GMP + 2H+.","definition_xrefs":["RHEA:18301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"},{"relation_name":"part_of","term_name":"GMP synthase (glutamine-hydrolyzing) activity","termid":"GO:0003922"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"part_of","termid":"GO:0003824"},{"rel_name":"part_of","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"GMP synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GMP-SYN-NH3-RXN"],"termid":"GO:0003921","terms_by_termid":{"GO:0003921":null}}


id: PBO:0062559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 6 (gene/pseudogene)","termid":"PBO:0062559"}


id: GO:0046149
data:
  {"annotated_genes":["SJAG_00366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pigment, any general or particular coloring matter in living organisms, e.g. melanin.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pigment breakdown","type":"exact"},{"name":"pigment catabolism","type":"exact"},{"name":"pigment degradation","type":"exact"}],"termid":"GO:0046149","terms_by_termid":{"GO:0042167":null}}


id: GO:0016990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + H2O = L-citrulline + NH3.","definition_xrefs":["EC:3.5.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"arginine deiminase activity","secondary_identifiers":["RHEA:19597","MetaCyc:ARGININE-DEIMINASE-RXN"],"synonyms":[{"name":"L-arginine deiminase activity","type":"related"},{"name":"L-arginine iminohydrolase activity","type":"related"},{"name":"arginine dihydrolase activity","type":"related"},{"name":"citrulline iminase activity","type":"related"}],"termid":"GO:0016990"}


id: PBO:0058154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4449","termid":"PBO:0058154"}


id: PBO:0090044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp4","termid":"PBO:0090044"}


id: FYPO:0007952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is normal (i.e. indistinguishable from wild type), during stationary phase. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during stationary phase","termid":"FYPO:0007952"}


id: GO:0043066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"negatively_regulates","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process","secondary_identifiers":["GO:0006916"],"synonyms":[{"name":"anti-apoptosis","type":"exact"},{"name":"apoptosis inhibitor activity","type":"related"},{"name":"down regulation of apoptosis","type":"exact"},{"name":"down-regulation of apoptosis","type":"exact"},{"name":"downregulation of apoptosis","type":"exact"},{"name":"inhibition of apoptosis","type":"narrow"},{"name":"negative regulation of apoptosis","type":"narrow"},{"name":"pro-survival","type":"related"}],"termid":"GO:0043066"}


id: PBO:0043307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 1","termid":"PBO:0043307"}


id: PBO:0111815
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein","termid":"PBO:0111815"}


id: PBO:0063919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma","termid":"PBO:0063919"}


id: MOD:00601
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively produces an heterocyclic amino acid with a covalent bond between the side chain and either its alpha amino or 1-carboxyl group, possibly breaking the peptide chain.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclized residue","synonyms":[{"name":"CycRes","type":"exact"}],"termid":"MOD:00601"}


id: PBO:0036107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell-cell_adhesion","termid":"PBO:0036107"}


id: SO:0000897
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is allelically_excluded.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"allelically_excluded","termid":"SO:0000137"},{"relation_name":"is_a","term_name":"epigenetically_modified_gene","termid":"SO:0000898"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allelically_excluded_gene","synonyms":[{"name":"allelically excluded gene","type":"exact"}],"termid":"SO:0000897"}


id: GO:0031277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the assembly of pseudopodia from the lateral side of the cell.","definition_xrefs":["GOC:dph","GOC:pg","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of lateral pseudopodium assembly (obsolete GO:0031277)","synonyms":[{"name":"activation of lateral pseudopodium formation","type":"narrow"},{"name":"positive regulation of lateral pseudopodium formation","type":"related"},{"name":"stimulation of lateral pseudopodium formation","type":"narrow"},{"name":"up regulation of lateral pseudopodium formation","type":"related"},{"name":"up-regulation of lateral pseudopodium formation","type":"related"},{"name":"upregulation of lateral pseudopodium formation","type":"related"}],"termid":"GO:0031277"}


id: PBO:0041509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 119","termid":"PBO:0041509"}


id: GO:0072091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stem cell proliferation. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"stem cell proliferation","termid":"GO:0072089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stem cell proliferation","termid":"GO:0072091"}


id: FYPO:0000749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to selenite ((SeO3)2-) ions. Cells stop growing (and may die) at a concentration of selenite ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to selenite ion","synonyms":[{"name":"hypersensitive to selenite ion","type":"exact"},{"name":"sensitive to selenite ion during mitotic cell cycle","type":"related"},{"name":"sensitive to selenite ion during vegetative growth","type":"exact"},{"name":"sensitive to selenite ions","type":"exact"},{"name":"sensitive to selenium","type":"related"}],"termid":"FYPO:0000749"}


id: PBO:0029503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_elongated,_curved_germ_tube","termid":"PBO:0029503"}


id: GO:0006186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into dGDP, deoxyguanosine diphosphate, to produce dGTP.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete dGDP phosphorylation (obsolete GO:0006186)","termid":"GO:0006186"}


id: PBO:0004477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nem1-Spo7 phosphatase complex catalytic subunit Nem1 (predicted)","termid":"PBO:0004477"}


id: FYPO:0008106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell size phenotype in which a cell has a volume that is larger than normal during stationary phase.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell size","termid":"FYPO:0008096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"increased cell size during stationary phase","termid":"FYPO:0008106"}


id: PBO:0029800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thick_actin_cables","termid":"PBO:0029800"}


id: PR:O94303
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- his4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazole glycerol phosphate synthase hisHF (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC418.01c","synonyms":[{"name":"IGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IGPS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ImGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-his4","type":"exact"}],"termid":"PR:O94303"}


id: GO:0061686
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99737],"is_not":false,"summary":null,"term":"GO:0061686"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (hercynine) + O2 = hercynylcysteine sulfoxide + H2O.","definition_xrefs":["RHEA:42704","GOC:dph","PMID:24828577","PMID:4276459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hercynylcysteine sulfoxide synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.21.3.10"],"synonyms":[{"name":"hercynylcysteine S-oxide synthase","type":"exact"},{"name":"hercynylcysteine sulfoxide synthase","type":"exact"}],"termid":"GO:0061686","terms_by_termid":{"GO:0061686":null}}


