# genes

id: SJAG_05239
data:
  {"coiled_coil_coords":[[898,918],[1009,1029]],"cv_annotations":{"biological_process":[{"annotations":[62590],"is_not":false,"summary":null,"term":"GO:0071897"},{"annotations":[93538],"is_not":false,"summary":null,"term":"GO:0006281"},{"annotations":[93539],"is_not":false,"summary":null,"term":"GO:0007534"},{"annotations":[93540],"is_not":false,"summary":null,"term":"GO:0006273"},{"annotations":[93541],"is_not":false,"summary":null,"term":"GO:0006272"},{"annotations":[93542],"is_not":false,"summary":null,"term":"GO:1902975"},{"annotations":[93543],"is_not":false,"summary":null,"term":"GO:1902315"},{"annotations":[93544],"is_not":false,"summary":null,"term":"GO:0006279"}],"cellular_component":[{"annotations":[93533],"is_not":false,"summary":null,"term":"GO:0005658"},{"annotations":[93534],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[93535],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[93536],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[93537],"is_not":false,"summary":null,"term":"GO:0035861"}],"molecular_function":[{"annotations":[93545],"is_not":false,"summary":null,"term":"GO:0003682"},{"annotations":[93546],"is_not":false,"summary":null,"term":"GO:0003688"},{"annotations":[93547],"is_not":false,"summary":null,"term":"GO:0003887"},{"annotations":[93548],"is_not":false,"summary":null,"term":"GO:0003697"}]},"dbxrefs":["InterPro:IPR006133","GOA:B6JY90","EnsemblGenomes-Tr:EEB06508","UniProtKB/TrEMBL:B6JY90","InterPro:IPR038256","InterPro:IPR024647","InterPro:IPR006134","InterPro:IPR006172","InterPro:IPR023211","InterPro:IPR012337","InterPro:IPR015088","InterPro:IPR036397","InterPro:IPR042087","EnsemblGenomes-Gn:SJAG_05239","InterPro:IPR017964"],"deletion_viability":"unknown","disordered_region_coords":[[37,37],[49,63],[66,68],[104,135],[137,167],[179,220],[223,224],[238,260],[306,335],[340,343],[348,353],[355,360],[382,381],[805,816],[818,821],[875,876],[1166,1175],[226,226],[288,293],[364,371]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpt5","uniquename":"SJAG_01544"},{"name":"pfd6","uniquename":"SJAG_01545"},{"name":"pkl1","uniquename":"SJAG_01546"},{"name":"aar2","uniquename":"SJAG_01547"},{"name":"rps14a","uniquename":"SJAG_01548"},{"name":"pol1","uniquename":"SJAG_05239"},{"name":"rpl702","uniquename":"SJAG_01551"},{"uniquename":"SJAG_01552"},{"uniquename":"SJAG_01553"},{"uniquename":"SJAG_06627"},{"uniquename":"SJAG_01555"}],"genes_by_uniquename":{"HGNC:9173":null,"SJAG_05239":null,"SPAC3H5.06c":null,"YNL102W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.132.60","interpro_id":"IPR042087","interpro_name":"DNA polymerase family B, thumb domain","interpro_type":"Homologous_superfamily","locations":[{"end":1234,"score":0.0,"start":1056}],"model":"4qclA05","name":"DNA polymerase family B, C-terminal domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.3200.20","interpro_id":"IPR038256","interpro_name":"DNA polymerase alpha, zinc finger domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1375,"score":1.2000000284906736e-32,"start":1236}],"model":"3floB00","name":"DNA Polymerase alpha, zinc finger"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.420.10","interpro_id":"IPR036397","interpro_name":"Ribonuclease H superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":753,"score":0.0,"start":525}],"model":"4fvmA03","name":"Ribonuclease H-like superfamily/Ribonuclease H"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.2820","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":478,"score":1.7000000270575425e-26,"start":368}],"model":"4qclA02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.1600.10","interpro_id":"IPR023211","interpro_name":"DNA polymerase, palm domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":966,"score":0.0,"start":757},{"end":1042,"score":0.0,"start":795}],"model":"4fxdA04","name":"Palm domain of DNA polymerase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00136","interpro_id":"IPR006134","interpro_name":"DNA-directed DNA polymerase, family B, multifunctional domain","interpro_type":"Domain","locations":[{"end":1205,"score":0.0,"start":768}],"model":"PF00136","name":"DNA polymerase family B"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03104","interpro_id":"IPR006133","interpro_name":"DNA-directed DNA polymerase, family B, exonuclease domain","interpro_type":"Domain","locations":[{"end":703,"score":2.300000046786758e-37,"start":398}],"model":"PF03104","name":"DNA polymerase family B, exonuclease domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08996","interpro_id":"IPR015088","interpro_name":"Zinc finger, DNA-directed DNA polymerase, family B, alpha","interpro_type":"Domain","locations":[{"end":1364,"score":1.5999999674579037e-30,"start":1241}],"model":"PF08996","name":"DNA Polymerase alpha zinc finger"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF12254","interpro_id":"IPR024647","interpro_name":"DNA polymerase alpha catalytic subunit, N-terminal domain","interpro_type":"Domain","locations":[{"end":102,"score":3.6999998825824334e-20,"start":38}],"model":"PF12254","name":"DNA polymerase alpha subunit p180 N terminal"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00106","interpro_id":"IPR006172","interpro_name":"DNA-directed DNA polymerase, family B","interpro_type":"Family","locations":[{"end":857,"score":1.1999999952050366e-11,"start":844},{"end":941,"score":1.1999999952050366e-11,"start":929},{"end":989,"score":1.1999999952050366e-11,"start":981}],"model":"PR00106","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00116","interpro_id":"IPR017964","interpro_name":"DNA-directed DNA polymerase, family B, conserved site","interpro_type":"Conserved_site","locations":[{"end":991,"score":0.0,"start":983}],"model":"PS00116","name":"DNA polymerase family B signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR45861","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":225,"score":0.0,"start":28}],"model":"PTHR45861:SF1","name":"DNA POLYMERASE ALPHA CATALYTIC SUBUNIT"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00486","interpro_id":"IPR006172","interpro_name":"DNA-directed DNA polymerase, family B","interpro_type":"Family","locations":[{"end":995,"score":0.0,"start":525}],"model":"SM00486","name":"DNA polymerase type-B family"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53098","interpro_id":"IPR012337","interpro_name":"Ribonuclease H-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":791,"score":0.0,"start":414}],"model":"0046173","name":"Ribonuclease H-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56672","interpro_id":"IPR043502","interpro_name":"DNA/RNA polymerase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1220,"score":0.0,"start":792}],"model":"0046174","name":"DNA/RNA polymerases"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00592","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1203,"score":0.0,"start":392}],"model":"TIGR00592","name":"DNA polymerase (pol2)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd05532","interpro_id":"IPR045846","interpro_name":"DNA polymerase alpha catalytic subunit, catalytic domain","interpro_type":"Domain","locations":[{"end":1221,"score":0.0,"start":831}],"model":"cd05532","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd05776","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":760,"score":0.0,"start":525}],"model":"cd05776","name":"inactive DEDDy 3'-5' exonuclease domain of eukaryotic DNA polymerase alpha, a family-B DNA polymerase"}],"location":{"chromosome_name":"supercont5.3","end_pos":1869552,"start_pos":1864924,"strand":"reverse"},"low_complexity_region_coords":[[227,237],[272,282],[294,305],[372,381],[383,395],[821,830]],"name":"pol1","ortholog_annotations":[{"gene_uniquename":"SJAG_05239","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9173","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05239","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H5.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05239","ortholog_taxonid":4932,"ortholog_uniquename":"YNL102W","reference_uniquename":"PMID:29761456"}],"product":"DNA polymerase alpha catalytic subunit","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006281","GO:0005694","GO:0006310","GO:0140097","GO:0006260","GO:0005634","GO:0016779"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0003682":null,"GO:0003688":null,"GO:0003697":null,"GO:0003887":null,"GO:0005634":null,"GO:0005658":null,"GO:0006272":null,"GO:0006273":null,"GO:0006279":null,"GO:0006281":null,"GO:0007534":null,"GO:0035861":null,"GO:0071897":null,"GO:0140445":null,"GO:1902315":null,"GO:1902975":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05239.1"],"transcripts_by_uniquename":{"SJAG_05239.1":null},"uniprot_identifier":"B6JY90","uniquename":"SJAG_05239"}


id: SJAG_05240
data:
  {"cv_annotations":{"biological_process":[{"annotations":[112504],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[112505],"is_not":false,"summary":null,"term":"GO:0000956"},{"annotations":[112506],"is_not":false,"summary":null,"term":"GO:1905323"}],"cellular_component":[{"annotations":[112493],"is_not":false,"summary":null,"term":"GO:0071013"},{"annotations":[112494],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[112495],"is_not":false,"summary":null,"term":"GO:1990726"},{"annotations":[112496],"is_not":false,"summary":null,"term":"GO:0120115"},{"annotations":[112497],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[112498],"is_not":false,"summary":null,"term":"GO:0005697"},{"annotations":[112499],"is_not":false,"summary":null,"term":"GO:0005686"},{"annotations":[112500],"is_not":false,"summary":null,"term":"GO:0071004"},{"annotations":[112501],"is_not":false,"summary":null,"term":"GO:0046540"},{"annotations":[112502],"is_not":false,"summary":null,"term":"GO:0005682"},{"annotations":[112503],"is_not":false,"summary":null,"term":"GO:0005688"}],"molecular_function":[{"annotations":[112507],"is_not":false,"summary":null,"term":"GO:0008266"},{"annotations":[112508],"is_not":false,"summary":null,"term":"GO:0030620"}]},"dbxrefs":["InterPro:IPR001163","EnsemblGenomes-Gn:SJAG_05240","GOA:B6JYC4","InterPro:IPR017132","UniProtKB/TrEMBL:B6JYC4","InterPro:IPR010920","EnsemblGenomes-Tr:EEB06542"],"deletion_viability":"unknown","disordered_region_coords":[[1,25],[61,65],[67,76],[104,112]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl32a","uniquename":"SJAG_01580"},{"name":"las1","uniquename":"SJAG_01581"},{"uniquename":"SJAG_01582"},{"name":"deb1","uniquename":"SJAG_01583"},{"name":"nup60","uniquename":"SJAG_01584"},{"name":"lsm7","uniquename":"SJAG_05240"},{"name":"dsc5","uniquename":"SJAG_01585"},{"name":"ear1","uniquename":"SJAG_01586"},{"name":"mak3","uniquename":"SJAG_01587"},{"name":"rpl27a","uniquename":"SJAG_01588"},{"name":"pet802","uniquename":"SJAG_01589"}],"genes_by_uniquename":{"HGNC:20470":null,"SJAG_05240":null,"SPCC285.12":null,"YNL147W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.30.100","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":107,"score":9.800000012268644e-32,"start":3}],"model":"4m75F00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01423","interpro_id":"IPR001163","interpro_name":"Sm domain, eukaryotic/archaea-type","interpro_type":"Domain","locations":[{"end":97,"score":3.999999935100636e-17,"start":27}],"model":"PF01423","name":"LSM domain"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF037188","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":112,"score":0.0,"start":1}],"model":"PIRSF037188","name":"U6 snRNA-associated Sm-like protein LSm7"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS52002","interpro_id":"IPR047575","interpro_name":"Sm domain","interpro_type":"Domain","locations":[{"end":102,"score":0.0,"start":23}],"model":"PS52002","name":"Sm domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10553","interpro_id":"IPR044641","interpro_name":"Sm-like protein Lsm7/SmG","interpro_type":"Family","locations":[{"end":109,"score":3.0999999496450275e-27,"start":21}],"model":"PTHR10553:SF5","name":"SMALL NUCLEAR RIBONUCLEOPROTEIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00651","interpro_id":"IPR001163","interpro_name":"Sm domain, eukaryotic/archaea-type","interpro_type":"Domain","locations":[{"end":98,"score":2.9999999047965676e-22,"start":26}],"model":"SM00651","name":"snRNP Sm proteins"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50182","interpro_id":"IPR010920","interpro_name":"LSM domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":102,"score":4.040000001039682e-19,"start":28}],"model":"0046263","name":"Sm-like ribonucleoproteins"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01729","interpro_id":"IPR017132","interpro_name":"Sm-like protein Lsm7","interpro_type":"Family","locations":[{"end":109,"score":0.0,"start":22}],"model":"cd01729","name":"Like-Sm protein 7"}],"location":{"chromosome_name":"supercont5.3","end_pos":1942317,"start_pos":1941932,"strand":"reverse"},"low_complexity_region_coords":[[83,96]],"name":"lsm7","ortholog_annotations":[{"gene_uniquename":"SJAG_05240","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20470","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05240","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC285.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05240","ortholog_taxonid":4932,"ortholog_uniquename":"YNL147W","reference_uniquename":"PMID:29761456"}],"product":"Lsm2-8 complex subunit Lsm7","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016071","GO:0005829","GO:0065003","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000956":null,"GO:0005634":null,"GO:0005682":null,"GO:0005686":null,"GO:0005688":null,"GO:0005697":null,"GO:0005829":null,"GO:0008266":null,"GO:0030620":null,"GO:0045292":null,"GO:0046540":null,"GO:0071004":null,"GO:0071013":null,"GO:0120115":null,"GO:1905323":null,"GO:1990726":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05240.1"],"transcripts_by_uniquename":{"SJAG_05240.1":null},"uniprot_identifier":"B6JYC4","uniquename":"SJAG_05240"}


id: SJAG_05241
data:
  {"coiled_coil_coords":[[52,72]],"cv_annotations":{"biological_process":[{"annotations":[103413],"is_not":false,"summary":null,"term":"GO:0042407"}],"cellular_component":[{"annotations":[103411],"is_not":false,"summary":null,"term":"GO:0061617"},{"annotations":[103412],"is_not":false,"summary":null,"term":"GO:0044284"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06595","InterPro:IPR012471","UniProtKB/TrEMBL:B6JYH7","EnsemblGenomes-Gn:SJAG_05241"],"deletion_viability":"unknown","disordered_region_coords":[[1,2],[4,9],[22,40],[64,99],[101,110],[112,114]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"prp3","uniquename":"SJAG_01634"},{"uniquename":"SJAG_01635"},{"uniquename":"SJAG_01636"},{"name":"gid2","uniquename":"SJAG_01637"},{"name":"tan1","uniquename":"SJAG_01638"},{"name":"mic19","uniquename":"SJAG_05241"},{"name":"mrs2","uniquename":"SJAG_01639"},{"name":"tim22","uniquename":"SJAG_01640"},{"name":"egd2","uniquename":"SJAG_01641"},{"name":"hrf1","uniquename":"SJAG_01642"},{"name":"tif11","uniquename":"SJAG_01643"}],"genes_by_uniquename":{"HGNC:21906":null,"HGNC:28184":null,"SJAG_05241":null,"SPBC25H2.09":null,"YFR011C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07956","interpro_id":"IPR012471","interpro_name":"Protein of unknown function DUF1690","interpro_type":"Family","locations":[{"end":145,"score":3.099999966246605e-17,"start":13}],"model":"PF07956","name":"Protein of Unknown function (DUF1690)"}],"location":{"chromosome_name":"supercont5.3","end_pos":2054940,"start_pos":2054431,"strand":"reverse"},"name":"mic19","ortholog_annotations":[{"gene_uniquename":"SJAG_05241","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21906","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05241","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28184","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05241","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC25H2.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05241","ortholog_taxonid":4932,"ortholog_uniquename":"YFR011C","reference_uniquename":"PMID:29761456"}],"product":"MICOS complex subunit Mic19/25","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0007005","GO:0005739","GO:0061024"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0042407":null,"GO:0044284":null,"GO:0061617":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05241.1"],"transcripts_by_uniquename":{"SJAG_05241.1":null},"uniprot_identifier":"B6JYH7","uniquename":"SJAG_05241"}


id: SJAG_05242
data:
  {"alleles_by_uniquename":{"SJAG_05242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05242","name":"wcs2delta","uniquename":"SJAG_05242:allele-1"}},"cv_annotations":{"biological_process":[{"annotations":[115212],"is_not":false,"summary":null,"term":"GO:0071483"},{"annotations":[68057],"is_not":false,"summary":null,"term":"GO:0006355"}],"molecular_function":[{"annotations":[68056],"is_not":false,"summary":null,"term":"GO:0043565"},{"annotations":[68055],"is_not":false,"summary":null,"term":"GO:0008270"}],"single_locus_phenotype":[{"annotations":[115215],"is_not":false,"summary":null,"term":"FYPO:0008031"},{"annotations":[115217],"is_not":false,"summary":null,"term":"FYPO:0008046"}]},"dbxrefs":["UniProtKB/TrEMBL:B6JYM0","GOA:B6JYM0","EnsemblGenomes-Tr:EEB06638","InterPro:IPR013088","EnsemblGenomes-Gn:SJAG_05242","InterPro:IPR000679"],"deletion_viability":"unknown","disordered_region_coords":[[1,19],[21,47],[49,71],[73,75],[83,84],[88,92],[100,105],[107,110],[147,149],[176,183],[207,209],[239,241],[390,393],[426,429],[452,463],[470,487],[508,514],[541,542],[431,439],[535,534]],"feature_publications":[{"reference_uniquename":"PMID:23873862","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl31b","uniquename":"SJAG_01676"},{"name":"rad50","uniquename":"SJAG_01677"},{"name":"gid1","uniquename":"SJAG_01678"},{"name":"ubc11","uniquename":"SJAG_01679"},{"name":"chk1","uniquename":"SJAG_01680"},{"name":"wcs2","uniquename":"SJAG_05242"},{"name":"hsp10","uniquename":"SJAG_01684"},{"name":"pex32","uniquename":"SJAG_01685"},{"name":"aly3","uniquename":"SJAG_01686"},{"name":"wcy2","uniquename":"SJAG_05729"},{"uniquename":"SJAG_01689"}],"genes_by_uniquename":{"SJAG_05242":null},"genotypes_by_uniquename":{"wcs2delta":{"display_name":"wcs2delta","display_uniquename":"wcs2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05242:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.50.10","interpro_id":"IPR013088","interpro_name":"Zinc finger, NHR/GATA-type","interpro_type":"Homologous_superfamily","locations":[{"end":542,"score":5.59999993561067e-15,"start":489}],"model":"4gatA00","name":"Erythroid Transcription Factor GATA-1, subunit A"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00320","interpro_id":"IPR000679","interpro_name":"Zinc finger, GATA-type","interpro_type":"Domain","locations":[{"end":532,"score":2.3000000515249752e-10,"start":499}],"model":"PF00320","name":"GATA zinc finger"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00344","interpro_id":"IPR000679","interpro_name":"Zinc finger, GATA-type","interpro_type":"Domain","locations":[{"end":524,"score":0.0,"start":499}],"model":"PS00344","name":"GATA-type zinc finger domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50114","interpro_id":"IPR000679","interpro_name":"Zinc finger, GATA-type","interpro_type":"Domain","locations":[{"end":526,"score":0.0,"start":493}],"model":"PS50114","name":"GATA-type zinc finger domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR45658","interpro_id":"IPR051140","interpro_name":"Plant GATA Transcription Factor","interpro_type":"Family","locations":[{"end":533,"score":2.59999998825566e-14,"start":52}],"model":"PTHR45658:SF169","name":"GATA TRANSCRIPTION FACTOR"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00401","interpro_id":"IPR000679","interpro_name":"Zinc finger, GATA-type","interpro_type":"Domain","locations":[{"end":542,"score":1.199999978942004e-13,"start":493}],"model":"SM00401","name":"zinc finger binding to DNA consensus sequence [AT]GATA[AG]"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57716","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":537,"score":5.699999933855837e-13,"start":494}],"model":"0045592","name":"Glucocorticoid receptor-like (DNA-binding domain)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00202","interpro_id":"IPR000679","interpro_name":"Zinc finger, GATA-type","interpro_type":"Domain","locations":[{"end":541,"score":2.1875600289544828e-13,"start":498}],"model":"cd00202","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":2139341,"start_pos":2136437,"strand":"reverse"},"low_complexity_region_coords":[[172,183],[235,246],[440,451],[535,540]],"name":"wcs2","name_descriptions":["White-Collar for Neurospora homologS"],"product":"blue light signalling transcription factor, zf-GATA type Wcs2","references_by_uniquename":{"GO_REF:0000002":null,"PMID:23873862":null},"subset_termids":["FYPO:0000298","GO:0006355","GO:0006351"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0008031":null,"FYPO:0008046":null,"FYPO_EXT:0000001":null,"GO:0006355":null,"GO:0008270":null,"GO:0043565":null,"GO:0071483":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05242.1"],"transcripts_by_uniquename":{"SJAG_05242.1":null},"uniprot_identifier":"B6JYM0","uniquename":"SJAG_05242"}


id: SJAG_05243
data:
  {"cv_annotations":{"biological_process":[{"annotations":[111633],"is_not":false,"summary":null,"term":"GO:0071030"}],"cellular_component":[{"annotations":[111630],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[111631],"is_not":false,"summary":null,"term":"GO:0044615"},{"annotations":[111632],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[111634],"is_not":false,"summary":null,"term":"GO:0017056"},{"annotations":[111635],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR012935","InterPro:IPR013909","EnsemblGenomes-Gn:SJAG_05243","EnsemblGenomes-Tr:EEB06654","GOA:B6JYN6","UniProtKB/TrEMBL:B6JYN6"],"deletion_viability":"unknown","disordered_region_coords":[[105,106],[108,109],[282,292]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sec1","uniquename":"SJAG_01697"},{"name":"ssb2","uniquename":"SJAG_01698"},{"name":"git3","uniquename":"SJAG_01699"},{"name":"rec7","uniquename":"SJAG_07002"},{"name":"tol1","uniquename":"SJAG_01702"},{"name":"rsm1","uniquename":"SJAG_05243"},{"name":"tco89","uniquename":"SJAG_01703"},{"name":"mrpl37","uniquename":"SJAG_05244"},{"name":"cca2","uniquename":"SJAG_01704"},{"name":"mug117","uniquename":"SJAG_01705"},{"uniquename":"SJAG_01706"}],"genes_by_uniquename":{"HGNC:29913":null,"SJAG_05243":null,"SPCC1753.05":null,"YML107C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07967","interpro_id":"IPR012935","interpro_name":"Zinc finger, C3HC-like","interpro_type":"Domain","locations":[{"end":141,"score":7.100000032345122e-10,"start":36}],"model":"PF07967","name":"C3HC zinc finger-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08600","interpro_id":"IPR013909","interpro_name":"Nuclear-interacting partner of ALK/Rsm1-like, C-terminal","interpro_type":"Domain","locations":[{"end":247,"score":0.0010999999940395355,"start":193}],"model":"PF08600","name":"Rsm1-like"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR15835","interpro_id":"IPR052238","interpro_name":"SCF(NIPA) complex component","interpro_type":"Family","locations":[{"end":145,"score":1.000000013351432e-10,"start":29}],"model":"PTHR15835:SF6","name":"NUCLEAR-INTERACTING PARTNER OF ALK"}],"location":{"chromosome_name":"supercont5.3","end_pos":2182843,"start_pos":2181869,"strand":"forward"},"name":"rsm1","ortholog_annotations":[{"gene_uniquename":"SJAG_05243","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29913","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05243","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1753.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05243","ortholog_taxonid":4932,"ortholog_uniquename":"YML107C","reference_uniquename":"PMID:29761456"}],"product":"pre-mRNA leakage protein Rsm1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005643","GO:0005634","GO:0005829","GO:0016071","GO:0005198"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0008270":null,"GO:0017056":null,"GO:0044615":null,"GO:0071030":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05243.1"],"transcripts_by_uniquename":{"SJAG_05243.1":null},"uniprot_identifier":"B6JYN6","uniquename":"SJAG_05243"}


id: SJAG_05244
data:
  {"cv_annotations":{"biological_process":[{"annotations":[113989],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[113987],"is_not":false,"summary":null,"term":"GO:0005762"},{"annotations":[113988],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[113990],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["GOA:B6JYN8","EnsemblGenomes-Tr:EEB06656","UniProtKB/TrEMBL:B6JYN8","EnsemblGenomes-Gn:SJAG_05244","InterPro:IPR013870"],"deletion_viability":"unknown","disordered_region_coords":[[50,53],[55,59],[61,63],[89,100],[102,115]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"git3","uniquename":"SJAG_01699"},{"name":"rec7","uniquename":"SJAG_07002"},{"name":"tol1","uniquename":"SJAG_01702"},{"name":"rsm1","uniquename":"SJAG_05243"},{"name":"tco89","uniquename":"SJAG_01703"},{"name":"mrpl37","uniquename":"SJAG_05244"},{"name":"cca2","uniquename":"SJAG_01704"},{"name":"mug117","uniquename":"SJAG_01705"},{"uniquename":"SJAG_01706"},{"name":"bye1","uniquename":"SJAG_01707"},{"name":"sfr1","uniquename":"SJAG_01708"}],"genes_by_uniquename":{"HGNC:16685":null,"SJAG_05244":null,"SPCC645.09":null,"YBR268W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08561","interpro_id":"IPR013870","interpro_name":"Large ribosomal subunit protein mL54","interpro_type":"Family","locations":[{"end":106,"score":3.20000001160798e-14,"start":41}],"model":"PF08561","name":"Mitochondrial ribosomal protein L37"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28595","interpro_id":"IPR013870","interpro_name":"Large ribosomal subunit protein mL54","interpro_type":"Family","locations":[{"end":113,"score":2.3000000341777405e-12,"start":43}],"model":"PTHR28595:SF1","name":"39S RIBOSOMAL PROTEIN L54, MITOCHONDRIAL"}],"location":{"chromosome_name":"supercont5.3","end_pos":2184855,"start_pos":2184505,"strand":"forward"},"low_complexity_region_coords":[[11,23]],"name":"mrpl37","ortholog_annotations":[{"gene_uniquename":"SJAG_05244","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16685","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05244","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC645.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05244","ortholog_taxonid":4932,"ortholog_uniquename":"YBR268W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit L54","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005739","GO:0140053","GO:0005198"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005739":null,"GO:0005762":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05244.1"],"transcripts_by_uniquename":{"SJAG_05244.1":null},"uniprot_identifier":"B6JYN8","uniquename":"SJAG_05244"}


id: SJAG_05245
data:
  {"coiled_coil_coords":[[1649,1669]],"cv_annotations":{"biological_process":[{"annotations":[103725],"is_not":false,"summary":null,"term":"GO:0006914"},{"annotations":[103726],"is_not":false,"summary":null,"term":"GO:0045324"},{"annotations":[103727],"is_not":false,"summary":null,"term":"GO:0007033"}],"cellular_component":[{"annotations":[103722],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[103723],"is_not":false,"summary":null,"term":"GO:0000324"},{"annotations":[103724],"is_not":false,"summary":null,"term":"GO:0016020"}],"molecular_function":[{"annotations":[103728],"is_not":false,"summary":null,"term":"GO:0046872"},{"annotations":[103729],"is_not":false,"summary":null,"term":"GO:0035091"}]},"dbxrefs":["InterPro:IPR036322","UniProtKB/TrEMBL:B6JYR8","InterPro:IPR023362","InterPro:IPR036372","InterPro:IPR013320","InterPro:IPR000409","EnsemblGenomes-Gn:SJAG_05245","InterPro:IPR017986","GOA:B6JYR8","EnsemblGenomes-Tr:EEB06686","InterPro:IPR015943","InterPro:IPR011011","InterPro:IPR001680"],"deletion_viability":"unknown","disordered_region_coords":[[521,523],[1599,1600],[1604,1628],[1638,1639],[1641,1648],[1822,1825],[1915,1919],[2137,2141]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01730"},{"uniquename":"SJAG_01731"},{"name":"wsp1","uniquename":"SJAG_01732"},{"name":"btf3","uniquename":"SJAG_01733"},{"uniquename":"SJAG_01734"},{"name":"lvs1","uniquename":"SJAG_05245"},{"name":"ksh1","uniquename":"SJAG_05736"},{"name":"bag102","uniquename":"SJAG_01737"},{"name":"mod5","uniquename":"SJAG_01738"},{"uniquename":"SJAG_01739"},{"name":"prt1","uniquename":"SJAG_01740"}],"genes_by_uniquename":{"HGNC:20751":null,"HGNC:29323":null,"SJAG_05245":null,"SPBC28E12.06c":null,"YCR032W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.1540.10","interpro_id":"IPR036372","interpro_name":"BEACH domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":2141,"score":0.0,"start":1849}],"model":"1t77A02","name":"BEACH domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.130.10.10","interpro_id":"IPR015943","interpro_name":"WD40/YVTN repeat-like-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":2520,"score":6.399999796899344e-20,"start":2181}],"model":"2ovrB02","name":"YVTN repeat-like/Quinoprotein amine dehydrogenase"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.29.30","interpro_id":"IPR011993","interpro_name":"PH-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1810,"score":7.099999947968172e-7,"start":1691}],"model":"1t77A01","name":"Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00400","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":2309,"score":14.0,"start":2274}],"model":"PF00400","name":"WD domain, G-beta repeat"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02138","interpro_id":"IPR000409","interpro_name":"BEACH domain","interpro_type":"Domain","locations":[{"end":2141,"score":0.0,"start":1859}],"model":"PF02138","name":"Beige/BEACH domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF14844","interpro_id":"IPR023362","interpro_name":"PH-BEACH domain","interpro_type":"Domain","locations":[{"end":1810,"score":0.0005699999746866524,"start":1749}],"model":"PF14844","name":"PH domain associated with Beige/BEACH"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50082","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":2318,"score":0.0,"start":2277}],"model":"PS50082","name":"Trp-Asp (WD) repeats profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50197","interpro_id":"IPR000409","interpro_name":"BEACH domain","interpro_type":"Domain","locations":[{"end":2141,"score":0.0,"start":1846}],"model":"PS50197","name":"BEACH domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51783","interpro_id":"IPR023362","interpro_name":"PH-BEACH domain","interpro_type":"Domain","locations":[{"end":1811,"score":0.0,"start":1675}],"model":"PS51783","name":"BEACH-type PH domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR46108","interpro_id":"IPR051944","interpro_name":"BEACH domain-containing protein","interpro_type":"Family","locations":[{"end":2481,"score":0.0,"start":357}],"model":"PTHR46108:SF4","name":"BLUE CHEESE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00320","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":2262,"score":22.0,"start":2223},{"end":2309,"score":8.69999985297909e-6,"start":2270},{"end":2404,"score":1.100000023841858,"start":2358},{"end":2478,"score":15.0,"start":2429}],"model":"SM00320","name":"WD40 repeats"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01026","interpro_id":"IPR000409","interpro_name":"BEACH domain","interpro_type":"Domain","locations":[{"end":2141,"score":0.0,"start":1858}],"model":"SM01026","name":"Beige/BEACH domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF49899","interpro_id":"IPR013320","interpro_name":"Concanavalin A-like lectin/glucanase domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":493,"score":3.9599999013262277e-7,"start":332}],"model":"0045737","name":"Concanavalin A-like lectins/glucanases"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50729","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1812,"score":2.2100000154282994e-16,"start":1682}],"model":"0049561","name":"PH domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50978","interpro_id":"IPR036322","interpro_name":"WD40-repeat-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":2485,"score":5.03999998015993e-24,"start":2190}],"model":"0048349","name":"WD40 repeat-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57903","interpro_id":"IPR011011","interpro_name":"Zinc finger, FYVE/PHD-type","interpro_type":"Homologous_superfamily","locations":[{"end":2543,"score":9.589999905301738e-8,"start":2490}],"model":"0045116","name":"FYVE/PHD zinc finger"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF81837","interpro_id":"IPR036372","interpro_name":"BEACH domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":2141,"score":0.0,"start":1848}],"model":"0040941","name":"BEACH domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00065","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":2540,"score":1.3797699693895993e-7,"start":2496}],"model":"cd00065","name":"FYVE domain like superfamily"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd06071","interpro_id":"IPR000409","interpro_name":"BEACH domain","interpro_type":"Domain","locations":[{"end":2141,"score":0.0,"start":1858}],"model":"cd06071","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":2254541,"start_pos":2246886,"strand":"forward"},"low_complexity_region_coords":[[217,231],[793,802],[1011,1029],[1131,1136],[1592,1603],[1650,1666]],"name":"lvs1","ortholog_annotations":[{"gene_uniquename":"SJAG_05245","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20751","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05245","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29323","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05245","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC28E12.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05245","ortholog_taxonid":4932,"ortholog_uniquename":"YCR032W","reference_uniquename":"PMID:29761456"}],"product":"beige protein homolog Lvs1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006914","GO:0005829","GO:0005773","GO:0016192","GO:0008289"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000324":null,"GO:0005829":null,"GO:0006914":null,"GO:0007033":null,"GO:0016020":null,"GO:0035091":null,"GO:0045324":null,"GO:0046872":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05245.1"],"transcripts_by_uniquename":{"SJAG_05245.1":null},"uniprot_identifier":"B6JYR8","uniquename":"SJAG_05245"}


id: SJAG_05246
data:
  {"cv_annotations":{},"dbxrefs":["UniProtKB/TrEMBL:B6JYX3","EnsemblGenomes-Gn:SJAG_05246","EnsemblGenomes-Tr:EEB06741"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"kap114","uniquename":"SJAG_01789"},{"name":"ppa3","uniquename":"SJAG_01790"},{"uniquename":"SJAG_01791"},{"name":"scd2","uniquename":"SJAG_01794"},{"uniquename":"SJAG_01795"},{"uniquename":"SJAG_05246"},{"name":"php3","uniquename":"SJAG_05247"},{"name":"ala1","uniquename":"SJAG_01797"},{"name":"mpn1","uniquename":"SJAG_01798"},{"name":"cka1","uniquename":"SJAG_01799"},{"uniquename":"SJAG_01800"}],"genes_by_uniquename":{"SJAG_05246":null},"has_protein_features":false,"location":{"chromosome_name":"supercont5.3","end_pos":2374837,"start_pos":2374478,"strand":"forward"},"product":"candidate S. pombe SPAC23C11.07 ortholog, syntenic position","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_05246.1"],"transcripts_by_uniquename":{"SJAG_05246.1":null},"uniprot_identifier":"B6JYX3","uniquename":"SJAG_05246"}


id: SJAG_05247
data:
  {"cv_annotations":{"biological_process":[{"annotations":[89814],"is_not":false,"summary":null,"term":"GO:0045944"}],"cellular_component":[{"annotations":[89812],"is_not":false,"summary":null,"term":"GO:0016602"},{"annotations":[89813],"is_not":false,"summary":null,"term":"GO:0000785"}],"molecular_function":[{"annotations":[89815],"is_not":false,"summary":null,"term":"GO:0001228"},{"annotations":[89816],"is_not":false,"summary":null,"term":"GO:0000978"}]},"dbxrefs":["InterPro:IPR003958","GOA:B6JYX4","InterPro:IPR009072","UniProtKB/TrEMBL:B6JYX4","InterPro:IPR003956","EnsemblGenomes-Tr:EEB06742","EnsemblGenomes-Gn:SJAG_05247"],"deletion_viability":"unknown","disordered_region_coords":[[60,61],[102,118]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ppa3","uniquename":"SJAG_01790"},{"uniquename":"SJAG_01791"},{"name":"scd2","uniquename":"SJAG_01794"},{"uniquename":"SJAG_01795"},{"uniquename":"SJAG_05246"},{"name":"php3","uniquename":"SJAG_05247"},{"name":"ala1","uniquename":"SJAG_01797"},{"name":"mpn1","uniquename":"SJAG_01798"},{"name":"cka1","uniquename":"SJAG_01799"},{"uniquename":"SJAG_01800"},{"name":"hcn1","uniquename":"SJAG_01801"}],"genes_by_uniquename":{"HGNC:7805":null,"SJAG_05247":null,"SPAC23C11.08":null,"YBL021C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.20.10","interpro_id":"IPR009072","interpro_name":"Histone-fold","interpro_type":"Homologous_superfamily","locations":[{"end":117,"score":2.802596928649634e-45,"start":4}],"model":"4wzsB00","name":"Histone, subunit A"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00808","interpro_id":"IPR003958","interpro_name":"Transcription factor CBF/NF-Y/archaeal histone domain","interpro_type":"Domain","locations":[{"end":75,"score":2.69999990485058e-24,"start":12}],"model":"PF00808","name":"Histone-like transcription factor (CBF/NF-Y) and archaeal histone"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00615","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":57,"score":1.6999999460513883e-20,"start":39},{"end":76,"score":1.6999999460513883e-20,"start":58},{"end":95,"score":1.6999999460513883e-20,"start":77}],"model":"PR00615","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00685","interpro_id":"IPR003956","interpro_name":"Transcription factor, NFYB/HAP3, conserved site","interpro_type":"Conserved_site","locations":[{"end":58,"score":0.0,"start":42}],"model":"PS00685","name":"NF-YB/HAP3 subunit signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11064","interpro_id":"IPR027113","interpro_name":"Transcription factor NFYB/HAP3","interpro_type":"Family","locations":[{"end":111,"score":0.0,"start":7}],"model":"PTHR11064:SF9","name":"CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47113","interpro_id":"IPR009072","interpro_name":"Histone-fold","interpro_type":"Homologous_superfamily","locations":[{"end":109,"score":7.450000482985961e-39,"start":11}],"model":"0039520","name":"Histone-fold"}],"location":{"chromosome_name":"supercont5.3","end_pos":2375623,"start_pos":2374892,"strand":"forward"},"name":"php3","ortholog_annotations":[{"gene_uniquename":"SJAG_05247","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7805","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05247","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23C11.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05247","ortholog_taxonid":4932,"ortholog_uniquename":"YBL021C","reference_uniquename":"PMID:29761456"}],"product":"CCAAT-binding factor complex subunit Php3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005694","GO:0003700","GO:0006355","GO:0005634","GO:0006351"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0000978":null,"GO:0001228":null,"GO:0016602":null,"GO:0045944":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05247.1"],"transcripts_by_uniquename":{"SJAG_05247.1":null},"uniprot_identifier":"B6JYX4","uniquename":"SJAG_05247"}


id: SJAG_05248
data:
  {"cv_annotations":{"biological_process":[{"annotations":[111439,112669],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[111441,112671],"is_not":false,"summary":null,"term":"GO:0180023"}],"cellular_component":[{"annotations":[111433,112665],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[111435,112667],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[111437],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[111443,112673],"is_not":false,"summary":null,"term":"GO:0070180"},{"annotations":[111445,112675],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06772","InterPro:IPR036796","InterPro:IPR020784","InterPro:IPR020783","InterPro:IPR000911","InterPro:IPR020785","EnsemblGenomes-Gn:SJAG_05248","GOA:B6JZ04","InterPro:IPR036769","UniProtKB/TrEMBL:B6JZ04"],"deletion_viability":"unknown","disordered_region_coords":[[92,94],[96,97],[152,165]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sts5","uniquename":"SJAG_01822"},{"name":"dpb3","uniquename":"SJAG_01823"},{"name":"pgl1","uniquename":"SJAG_01824"},{"name":"pef1","uniquename":"SJAG_01825"},{"name":"naa20","uniquename":"SJAG_01826"},{"name":"rpl12a","uniquename":"SJAG_05248"},{"name":"sfc4","uniquename":"SJAG_01827"},{"uniquename":"SJAG_01828"},{"name":"rml2","uniquename":"SJAG_01829"},{"name":"cbc3","uniquename":"SJAG_01830"},{"name":"psm1","uniquename":"SJAG_01831"}],"genes_by_uniquename":{"HGNC:10302":null,"SJAG_05248":null,"SPCC16C4.13c":null,"SPCC31H12.04c":null,"YDR418W":null,"YEL054C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.10.250","interpro_id":"IPR036769","interpro_name":"Large ribosomal subunit protein uL11, C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":163,"score":1.4000000211677737e-38,"start":81}],"model":"1vx4K02","name":"Ribosomal protein L11, C-terminal domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.1550.10","interpro_id":"IPR036796","interpro_name":"Large ribosomal subunit protein uL11, N-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":80,"score":2.8999999517622036e-35,"start":1}],"model":"1wibA00","name":"Ribosomal protein L11/L12, N-terminal domain"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_00736","interpro_id":"IPR000911","interpro_name":"Ribosomal protein uL11","interpro_type":"Family","locations":[{"end":145,"score":0.0,"start":9}],"model":"MF_00736","name":"Large ribosomal subunit protein uL11 [rplK]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00298","interpro_id":"IPR020783","interpro_name":"Large ribosomal subunit protein uL11, C-terminal","interpro_type":"Domain","locations":[{"end":143,"score":2.3000000189311474e-15,"start":74}],"model":"PF00298","name":"Ribosomal protein L11, RNA binding domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03946","interpro_id":"IPR020784","interpro_name":"Large ribosomal subunit protein uL11, N-terminal","interpro_type":"Domain","locations":[{"end":69,"score":1.700000022048607e-16,"start":16}],"model":"PF03946","name":"Ribosomal protein L11, N-terminal domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00359","interpro_id":"IPR020785","interpro_name":"Large ribosomal subunit protein uL11, conserved site","interpro_type":"Conserved_site","locations":[{"end":145,"score":0.0,"start":130}],"model":"PS00359","name":"Ribosomal protein L11 signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11661","interpro_id":"IPR000911","interpro_name":"Ribosomal protein uL11","interpro_type":"Family","locations":[{"end":153,"score":0.0,"start":1}],"model":"PTHR11661:SF2","name":"60S RIBOSOMAL PROTEIN L12"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00649","interpro_id":"IPR000911","interpro_name":"Ribosomal protein uL11","interpro_type":"Family","locations":[{"end":144,"score":0.0,"start":13}],"model":"SM00649","name":"Ribosomal protein L11/L12"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF46906","interpro_id":"IPR036769","interpro_name":"Large ribosomal subunit protein uL11, C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":148,"score":1.4400000163408984e-17,"start":75}],"model":"0053642","name":"Ribosomal protein L11, C-terminal domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54747","interpro_id":"IPR036796","interpro_name":"Large ribosomal subunit protein uL11, N-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":86,"score":9.810000271849507e-30,"start":1}],"model":"0050580","name":"Ribosomal L11/L12e N-terminal domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00349","interpro_id":"IPR000911","interpro_name":"Ribosomal protein uL11","interpro_type":"Family","locations":[{"end":143,"score":0.0,"start":15}],"model":"cd00349","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":2435433,"start_pos":2434784,"strand":"reverse"},"name":"rpl12a","ortholog_annotations":[{"gene_uniquename":"SJAG_05248","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10302","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05248","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC16C4.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05248","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC31H12.04c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_05248","ortholog_taxonid":4932,"ortholog_uniquename":"YDR418W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05248","ortholog_taxonid":4932,"ortholog_uniquename":"YEL054C","reference_uniquename":"PMID:29761456"}],"product":"60S ribosomal protein L12.1/L12A","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0022626","GO:0005730","GO:0002181","GO:0005634","GO:0042254","GO:0065003","GO:0005198","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005730":null,"GO:0005829":null,"GO:0022625":null,"GO:0070180":null,"GO:0180023":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05248.1"],"transcripts_by_uniquename":{"SJAG_05248.1":null},"uniprot_identifier":"B6JZ04","uniquename":"SJAG_05248"}


id: SJAG_05249
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84398],"is_not":false,"summary":null,"term":"GO:0032543"},{"annotations":[84399],"is_not":false,"summary":null,"term":"GO:0002127"}],"cellular_component":[{"annotations":[84396],"is_not":false,"summary":null,"term":"GO:0005759"},{"annotations":[84397],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[84400],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[84401],"is_not":false,"summary":null,"term":"GO:0032267"}]},"dbxrefs":["InterPro:IPR011063","InterPro:IPR012795","EnsemblGenomes-Tr:EEB06835","UniProtKB/TrEMBL:B6JZ67","InterPro:IPR014729","EnsemblGenomes-Gn:SJAG_05249","InterPro:IPR012094","GOA:B6JZ67"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gid8","uniquename":"SJAG_01886"},{"name":"rhp41","uniquename":"SJAG_01887"},{"name":"exg2","uniquename":"SJAG_01888"},{"name":"nod1","uniquename":"SJAG_01889"},{"name":"pet801","uniquename":"SJAG_01890"},{"name":"til1","uniquename":"SJAG_05249"},{"uniquename":"SJAG_01893"},{"name":"acp1","uniquename":"SJAG_01894"},{"name":"emi5","uniquename":"SJAG_01895"},{"name":"icp55","uniquename":"SJAG_01896"},{"name":"pby1","uniquename":"SJAG_01897"}],"genes_by_uniquename":{"SJAG_05249":null,"SPAC12B10.08c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.620","interpro_id":"IPR014729","interpro_name":"Rossmann-like alpha/beta/alpha sandwich fold","interpro_type":"Homologous_superfamily","locations":[{"end":247,"score":8.407790785948902e-45,"start":18}],"model":"1ni5A01","name":"HUPs"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_01161","interpro_id":"IPR012094","interpro_name":"tRNA(Ile)-lysidine synthase","interpro_type":"Family","locations":[{"end":307,"score":0.0,"start":12}],"model":"MF_01161","name":"tRNA(Ile)-lysidine synthase [tilS]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01171","interpro_id":"IPR011063","interpro_name":"tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal","interpro_type":"Domain","locations":[{"end":214,"score":7.800000226515352e-35,"start":26}],"model":"PF01171","name":"PP-loop family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43033","interpro_id":"IPR012094","interpro_name":"tRNA(Ile)-lysidine synthase","interpro_type":"Family","locations":[{"end":446,"score":0.0,"start":24}],"model":"PTHR43033:SF1","name":"TRNA(ILE)-LYSIDINE SYNTHASE-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52402","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":215,"score":8.869999722028723e-33,"start":5}],"model":"0050746","name":"Adenine nucleotide alpha hydrolases-like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR02432","interpro_id":"IPR012795","interpro_name":"tRNA(Ile)-lysidine synthase, N-terminal","interpro_type":"Domain","locations":[{"end":214,"score":1.7999999391340913e-36,"start":25}],"model":"TIGR02432","name":"tRNA lysidine(34) synthetase TilS"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01992","interpro_id":"IPR012795","interpro_name":"tRNA(Ile)-lysidine synthase, N-terminal","interpro_type":"Domain","locations":[{"end":214,"score":0.0,"start":26}],"model":"cd01992","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":2561054,"start_pos":2559567,"strand":"forward"},"name":"til1","ortholog_annotations":[{"gene_uniquename":"SJAG_05249","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC12B10.08c","reference_uniquename":"PMID:21511999"}],"product":"mitochondrial tRNA(Ile)-lysidine synthetase Til1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0140101","GO:0016874","GO:0140053","GO:0005739","GO:0140098","GO:0006399"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002127":null,"GO:0005524":null,"GO:0005739":null,"GO:0005759":null,"GO:0032267":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05249.1"],"transcripts_by_uniquename":{"SJAG_05249.1":null},"uniprot_identifier":"B6JZ67","uniquename":"SJAG_05249"}


id: SJAG_05250
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05250","UniProtKB/TrEMBL:B6JZ95","EnsemblGenomes-Tr:EEB06863"],"deletion_viability":"unknown","disordered_region_coords":[[27,29],[39,57],[69,72],[74,109],[137,162],[4,13]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"teb1","uniquename":"SJAG_01916"},{"name":"mba1","uniquename":"SJAG_01917"},{"name":"eki1","uniquename":"SJAG_01918"},{"name":"msa1","uniquename":"SJAG_01919"},{"name":"cit1","uniquename":"SJAG_01922"},{"uniquename":"SJAG_05250"},{"uniquename":"SJAG_01923"},{"name":"mpc1","uniquename":"SJAG_01924"},{"name":"sec6","uniquename":"SJAG_01925"},{"name":"hif2","uniquename":"SJAG_01926"},{"name":"pdh1","uniquename":"SJAG_01927"}],"genes_by_uniquename":{"SJAG_05250":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":2619084,"start_pos":2618290,"strand":"forward"},"low_complexity_region_coords":[[14,26]],"product":"Schizosaccharomyces japonicus specific protein","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_05250.1"],"transcripts_by_uniquename":{"SJAG_05250.1":null},"uniprot_identifier":"B6JZ95","uniquename":"SJAG_05250"}


id: SJAG_05252
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74175],"is_not":false,"summary":null,"term":"GO:0010499"}],"cellular_component":[{"annotations":[74178],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[74176],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[74179],"is_not":false,"summary":null,"term":"GO:0070577"},{"annotations":[74177],"is_not":false,"summary":null,"term":"GO:0016504"},{"annotations":[74180],"is_not":false,"summary":null,"term":"GO:0070628"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05252","InterPro:IPR035309","EnsemblGenomes-Tr:EEB06980","InterPro:IPR032430","UniProtKB/TrEMBL:B6JZL2","GOA:B6JZL2"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02047"},{"name":"ntu2","uniquename":"SJAG_02048"},{"name":"mrl1","uniquename":"SJAG_02049"},{"name":"anc1","uniquename":"SJAG_02050"},{"uniquename":"SJAG_02052"},{"uniquename":"SJAG_05252"},{"name":"pdf1","uniquename":"SJAG_02056"},{"name":"lsc1","uniquename":"SJAG_02057"},{"name":"dsk1","uniquename":"SJAG_02058"},{"uniquename":"SJAG_02059"},{"uniquename":"SJAG_02060"}],"genes_by_uniquename":{"SJAG_05252":null,"YFL007W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF16507","interpro_id":"IPR032430","interpro_name":"Proteasome activator Blm10, mid region","interpro_type":"Domain","locations":[{"end":855,"score":0.0,"start":348}],"model":"PF16507","name":"Proteasome-substrate-size regulator, mid region"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR32170","interpro_id":"IPR035309","interpro_name":"Proteasome activator complex subunit 4","interpro_type":"Family","locations":[{"end":1178,"score":0.0,"start":11}],"model":"PTHR32170:SF3","name":"PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4"}],"location":{"chromosome_name":"supercont5.3","end_pos":2912151,"start_pos":2908594,"strand":"forward"},"low_complexity_region_coords":[[207,218]],"ortholog_annotations":[{"gene_uniquename":"SJAG_05252","ortholog_taxonid":4932,"ortholog_uniquename":"YFL007W","reference_uniquename":"PMID:26896847"}],"product":"armadillo fold, proteasome activator Blm10-like","references_by_uniquename":{"GO_REF:0000033":null,"PMID:26896847":null},"subset_termids":["GO:0030234","GO:0005634","GO:0005829","GO:0030163","GO:0098772"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0010499":null,"GO:0016504":null,"GO:0070577":null,"GO:0070628":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05252.1"],"transcripts_by_uniquename":{"SJAG_05252.1":null},"uniprot_identifier":"B6JZL2","uniquename":"SJAG_05252"}


id: SJAG_05253
data:
  {"coiled_coil_coords":[[711,742]],"cv_annotations":{"biological_process":[{"annotations":[99457],"is_not":false,"summary":null,"term":"GO:0006364"}],"cellular_component":[{"annotations":[99454],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[99455],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[99456],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[99458],"is_not":false,"summary":null,"term":"GO:0000182"},{"annotations":[99459],"is_not":false,"summary":null,"term":"GO:0001163"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06994","InterPro:IPR016024","EnsemblGenomes-Gn:SJAG_05253","UniProtKB/TrEMBL:B6JZM6","GOA:B6JZM6","InterPro:IPR007015"],"deletion_viability":"unknown","disordered_region_coords":[[607,608],[667,709],[713,744],[766,768],[929,951]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cqd2","uniquename":"SJAG_02064"},{"name":"oca3","uniquename":"SJAG_02065"},{"name":"spt8","uniquename":"SJAG_02066"},{"name":"bot1","uniquename":"SJAG_02067"},{"uniquename":"SJAG_02068"},{"name":"pol5","uniquename":"SJAG_05253"},{"name":"srr1","uniquename":"SJAG_02069"},{"name":"rpb8","uniquename":"SJAG_02070"},{"name":"mrpl24","uniquename":"SJAG_02071"},{"name":"dbl3","uniquename":"SJAG_02072"},{"name":"tam10","uniquename":"SJAG_02073"}],"genes_by_uniquename":{"HGNC:7546":null,"SJAG_05253":null,"SPBC14C8.14c":null,"YEL055C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04931","interpro_id":"IPR007015","interpro_name":"DNA polymerase V/Myb-binding protein 1A","interpro_type":"Family","locations":[{"end":793,"score":0.0,"start":40}],"model":"PF04931","name":"DNA polymerase phi"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13213","interpro_id":"IPR007015","interpro_name":"DNA polymerase V/Myb-binding protein 1A","interpro_type":"Family","locations":[{"end":921,"score":0.0,"start":3}],"model":"PTHR13213:SF2","name":"MYB-BINDING PROTEIN 1A FAMILY MEMBER"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":553,"score":3.7999998703242e-9,"start":8}],"model":"0045874","name":"ARM repeat"}],"location":{"chromosome_name":"supercont5.3","end_pos":2949275,"start_pos":2946364,"strand":"forward"},"low_complexity_region_coords":[[540,561],[620,633],[669,692],[704,721],[724,750],[860,873]],"name":"pol5","ortholog_annotations":[{"gene_uniquename":"SJAG_05253","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7546","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05253","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC14C8.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05253","ortholog_taxonid":4932,"ortholog_uniquename":"YEL055C","reference_uniquename":"PMID:29761456"}],"product":"rRNA processing protein Pol5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0042254","GO:0005730","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000182":null,"GO:0001163":null,"GO:0005634":null,"GO:0005730":null,"GO:0005829":null,"GO:0006364":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05253.1"],"transcripts_by_uniquename":{"SJAG_05253.1":null},"uniprot_identifier":"B6JZM6","uniquename":"SJAG_05253"}


id: SJAG_05254
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05254","EnsemblGenomes-Tr:EEB07032","GOA:B6JZR4","UniProtKB/TrEMBL:B6JZR4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"atp18","uniquename":"SJAG_02105"},{"uniquename":"SJAG_02106"},{"uniquename":"SJAG_02107"},{"uniquename":"SJAG_05840"},{"name":"pll12","uniquename":"SJAG_02108"},{"uniquename":"SJAG_05254"}],"genes_by_uniquename":{"SJAG_05254":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":3031667,"start_pos":3031089,"strand":"reverse"},"product":"amino acid/polyamine transporter","taxonid":4897,"taxonomic_distribution":"other","tm_domain_coords":[[130,152]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05254.1"],"transcripts_by_uniquename":{"SJAG_05254.1":null},"uniprot_identifier":"B6JZR4","uniquename":"SJAG_05254"}


id: SJAG_05255
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB07050","EnsemblGenomes-Gn:SJAG_05255","UniProtKB/TrEMBL:B6K1L9"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02127"},{"uniquename":"SJAG_02126"},{"uniquename":"SJAG_02125"},{"uniquename":"SJAG_02124"},{"uniquename":"SJAG_06576"},{"uniquename":"SJAG_05255"},{"uniquename":"SJAG_02131"},{"uniquename":"SJAG_02132"},{"uniquename":"SJAG_02133"},{"name":"gpp6","uniquename":"SJAG_02134"},{"uniquename":"SJAG_02135"}],"genes_by_uniquename":{"SJAG_05255":null},"has_protein_features":false,"location":{"chromosome_name":"supercont5.1","end_pos":52458,"start_pos":52237,"strand":"reverse"},"product":"dubious","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_05255.1"],"transcripts_by_uniquename":{"SJAG_05255.1":null},"uniprot_identifier":"B6K1L9","uniquename":"SJAG_05255"}


id: SJAG_05256
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91644],"is_not":false,"summary":null,"term":"GO:0046294"}],"cellular_component":[{"annotations":[91642],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[91643],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[91645],"is_not":false,"summary":null,"term":"GO:0051907"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K1N3","EnsemblGenomes-Tr:EEB07064","EnsemblGenomes-Gn:SJAG_05256","InterPro:IPR011057","InterPro:IPR006913","GOA:B6K1N3"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02139"},{"uniquename":"SJAG_02140"},{"uniquename":"SJAG_02142"},{"uniquename":"SJAG_02143"},{"uniquename":"SJAG_02144"},{"uniquename":"SJAG_05256"},{"uniquename":"SJAG_02145"},{"uniquename":"SJAG_02146"},{"uniquename":"SJAG_02147"},{"name":"gcd1","uniquename":"SJAG_02148"},{"name":"mca1","uniquename":"SJAG_02149"}],"genes_by_uniquename":{"HGNC:29920":null,"HGNC:43879":null,"SJAG_05256":null,"SPAC29B12.13":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.170.150.70","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":121,"score":1.0000000036274937e-15,"start":3}],"model":"3facA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04828","interpro_id":"IPR006913","interpro_name":"CENP-V/GFA domain","interpro_type":"Domain","locations":[{"end":118,"score":0.00033999999868683517,"start":26}],"model":"PF04828","name":"Glutathione-dependent formaldehyde-activating enzyme"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51891","interpro_id":"IPR006913","interpro_name":"CENP-V/GFA domain","interpro_type":"Domain","locations":[{"end":143,"score":0.0,"start":3}],"model":"PS51891","name":"CENP-V/GFA domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR33337","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":136,"score":8.299999617179636e-15,"start":2}],"model":"PTHR33337:SF40","name":"GFA DOMAIN-CONTAINING PROTEIN"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51316","interpro_id":"IPR011057","interpro_name":"Mss4-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":143,"score":1.0499999958666522e-24,"start":1}],"model":"0050863","name":"Mss4-like"}],"location":{"chromosome_name":"supercont5.1","end_pos":94229,"start_pos":93744,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_05256","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29920","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05256","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:43879","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05256","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC29B12.13"}],"product":"CENP-V, S-(hydroxymethyl)glutathione synthase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:29761456":null},"subset_termids":["GO:0016829","GO:0005634","GO:0005829","GO:0098754"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0046294":null,"GO:0051907":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05256.1"],"transcripts_by_uniquename":{"SJAG_05256.1":null},"uniprot_identifier":"B6K1N3","uniquename":"SJAG_05256"}


id: SJAG_05257
data:
  {"cv_annotations":{"biological_process":[{"annotations":[103160],"is_not":false,"summary":null,"term":"GO:0006285"},{"annotations":[73583],"is_not":false,"summary":null,"term":"GO:0006307"}],"cellular_component":[{"annotations":[103158],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[103159],"is_not":false,"summary":null,"term":"GO:0032993"}],"molecular_function":[{"annotations":[103161],"is_not":false,"summary":null,"term":"GO:0032131"},{"annotations":[103162],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[103163],"is_not":false,"summary":null,"term":"GO:0140431"},{"annotations":[73579],"is_not":false,"summary":null,"term":"GO:0008725"},{"annotations":[73585],"is_not":false,"summary":null,"term":"GO:0043916"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K1P6","EnsemblGenomes-Gn:SJAG_05257","GOA:B6K1P6","EnsemblGenomes-Tr:EEB07077","InterPro:IPR003265","InterPro:IPR011257"],"deletion_viability":"unknown","disordered_region_coords":[[2,4],[19,22]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02152"},{"name":"gpp10","uniquename":"SJAG_02153"},{"uniquename":"SJAG_02154"},{"uniquename":"SJAG_02155"},{"uniquename":"SJAG_02156"},{"name":"mag2","uniquename":"SJAG_05257"},{"name":"lat1","uniquename":"SJAG_02158"},{"uniquename":"SJAG_02159"},{"name":"sec71","uniquename":"SJAG_02160"},{"name":"pgc1","uniquename":"SJAG_02161"},{"name":"pop2","uniquename":"SJAG_02162"}],"genes_by_uniquename":{"SJAG_05257":null,"SPBC23G7.11":null,"YER142C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.1670.40","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":212,"score":0.0,"start":22}],"model":"4b21A01","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.340.30","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":162,"score":0.0,"start":47}],"model":"4b21A02","name":"Hypothetical protein; domain 2"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00730","interpro_id":"IPR003265","interpro_name":"HhH-GPD domain","interpro_type":"Domain","locations":[{"end":199,"score":5.299999883412454e-10,"start":55}],"model":"PF00730","name":"HhH-GPD superfamily base excision DNA repair protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43003","interpro_id":"IPR051912","interpro_name":"Alkylbase DNA Glycosylase/Transcriptional Activator","interpro_type":"Family","locations":[{"end":215,"score":0.0,"start":10}],"model":"PTHR43003:SF15","name":"DNA-3-METHYLADENINE GLYCOSYLASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00478","interpro_id":"IPR003265","interpro_name":"HhH-GPD domain","interpro_type":"Domain","locations":[{"end":215,"score":8.500000148181641e-10,"start":59}],"model":"SM00478","name":"endonuclease III"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48150","interpro_id":"IPR011257","interpro_name":"DNA glycosylase","interpro_type":"Homologous_superfamily","locations":[{"end":213,"score":1.5000000282665023e-31,"start":46}],"model":"0041038","name":"DNA-glycosylase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00056","interpro_id":"IPR003265","interpro_name":"HhH-GPD domain","interpro_type":"Domain","locations":[{"end":212,"score":3.1759900578283525e-26,"start":51}],"model":"cd00056","name":""}],"location":{"chromosome_name":"supercont5.1","end_pos":125715,"start_pos":125041,"strand":"reverse"},"name":"mag2","ortholog_annotations":[{"gene_uniquename":"SJAG_05257","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC23G7.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05257","ortholog_taxonid":4932,"ortholog_uniquename":"YER142C","reference_uniquename":"PMID:29761456"}],"product":"DNA-3-methyladenine glycosylase Mag2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016798","GO:0140097","GO:0006281","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003677":null,"GO:0005634":null,"GO:0006285":null,"GO:0006307":null,"GO:0008725":null,"GO:0032131":null,"GO:0032993":null,"GO:0043916":null,"GO:0140431":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05257.1"],"transcripts_by_uniquename":{"SJAG_05257.1":null},"uniprot_identifier":"B6K1P6","uniquename":"SJAG_05257"}


id: SJAG_05258
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05258","EnsemblGenomes-Tr:EEB07125","UniProtKB/TrEMBL:B6K1U4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrp51","uniquename":"SJAG_02201"},{"name":"bbc1","uniquename":"SJAG_02202"},{"name":"rtr1","uniquename":"SJAG_02203"},{"name":"sec20","uniquename":"SJAG_02204"},{"uniquename":"SJAG_02205"},{"name":"new11","uniquename":"SJAG_05258"},{"name":"frs1","uniquename":"SJAG_02206"},{"name":"rpl16b","uniquename":"SJAG_02207"},{"name":"sec6102","uniquename":"SJAG_02208"},{"name":"iws1","uniquename":"SJAG_02209"},{"name":"tom5","uniquename":"SJAG_05259"}],"genes_by_uniquename":{"SJAG_05258":null,"SPAC23A1.20":null},"has_protein_features":false,"location":{"chromosome_name":"supercont5.1","end_pos":237854,"start_pos":237141,"strand":"forward"},"name":"new11","ortholog_annotations":[{"gene_uniquename":"SJAG_05258","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC23A1.20","reference_uniquename":"PMID:26896847"}],"product":"Schizosaccharomyces specific protein New11","references_by_uniquename":{"PMID:26896847":null},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_05258.1"],"transcripts_by_uniquename":{"SJAG_05258.1":null},"uniprot_identifier":"B6K1U4","uniquename":"SJAG_05258"}


id: SJAG_05259
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102259],"is_not":false,"summary":null,"term":"GO:0030150"}],"cellular_component":[{"annotations":[102258],"is_not":false,"summary":null,"term":"GO:0005742"}],"molecular_function":[{"annotations":[102260],"is_not":false,"summary":null,"term":"GO:0008320"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K1U9","GOA:B6K1U9","EnsemblGenomes-Gn:SJAG_05259","InterPro:IPR019603","EnsemblGenomes-Tr:EEB07130"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"new11","uniquename":"SJAG_05258"},{"name":"frs1","uniquename":"SJAG_02206"},{"name":"rpl16b","uniquename":"SJAG_02207"},{"name":"sec6102","uniquename":"SJAG_02208"},{"name":"iws1","uniquename":"SJAG_02209"},{"name":"tom5","uniquename":"SJAG_05259"},{"name":"nup44","uniquename":"SJAG_02210"},{"name":"cog5","uniquename":"SJAG_02211"},{"name":"tbf1","uniquename":"SJAG_02212"},{"name":"pdc2","uniquename":"SJAG_02213"},{"name":"ulp1","uniquename":"SJAG_02214"}],"genes_by_uniquename":{"HGNC:31369":null,"SJAG_05259":null,"SPBC19G7.19":null,"YPR133W-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10642","interpro_id":"IPR019603","interpro_name":"Mitochondrial outer membrane translocase complex, subunit Tom5","interpro_type":"Family","locations":[{"end":46,"score":1.6000000213622911e-9,"start":1}],"model":"PF10642","name":"Mitochondrial import receptor subunit or translocase"}],"location":{"chromosome_name":"supercont5.1","end_pos":245844,"start_pos":245593,"strand":"forward"},"low_complexity_region_coords":[[24,37]],"name":"tom5","ortholog_annotations":[{"gene_uniquename":"SJAG_05259","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:31369","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05259","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.19","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_05259","ortholog_taxonid":4932,"ortholog_uniquename":"YPR133W-A","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial TOM complex subunit Tom5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005739","GO:0006605","GO:0055085","GO:0022857","GO:0140318"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005742":null,"GO:0008320":null,"GO:0030150":null},"tm_domain_coords":[[27,44]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05259.1"],"transcripts_by_uniquename":{"SJAG_05259.1":null},"uniprot_identifier":"B6K1U9","uniquename":"SJAG_05259"}


id: SJAG_05260
data:
  {"cv_annotations":{"biological_process":[{"annotations":[96016],"is_not":false,"summary":null,"term":"GO:0032121"},{"annotations":[96017],"is_not":false,"summary":null,"term":"GO:0051321"}],"cellular_component":[{"annotations":[96011],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[96012],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[96013],"is_not":false,"summary":null,"term":"GO:0035974"},{"annotations":[96014],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[96015],"is_not":false,"summary":null,"term":"GO:0110092"}],"molecular_function":[{"annotations":[115609],"is_not":false,"summary":null,"term":"GO:0005515"},{"annotations":[96018,96019],"is_not":false,"summary":null,"term":"GO:0030674"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05260","EnsemblGenomes-Tr:EEB07158","UniProtKB/TrEMBL:B6K1X7","GOA:B6K1X7"],"deletion_viability":"unknown","feature_publications":[{"reference_uniquename":"PMID:23337086","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"put2","uniquename":"SJAG_02235"},{"uniquename":"SJAG_02236"},{"name":"xrc4","uniquename":"SJAG_02237"},{"name":"ebp1","uniquename":"SJAG_02238"},{"name":"puf4","uniquename":"SJAG_02239"},{"name":"bqt1","uniquename":"SJAG_05260"},{"name":"cfr1","uniquename":"SJAG_02240"},{"name":"syb1","uniquename":"SJAG_02241"},{"name":"sen1","uniquename":"SJAG_02242"},{"name":"rpl24a","uniquename":"SJAG_02243"},{"name":"ubp6","uniquename":"SJAG_02244"}],"genes_by_uniquename":{"SJAG_03287":null,"SJAG_05260":null,"SPAC6G9.13c":null},"has_protein_features":false,"location":{"chromosome_name":"supercont5.1","end_pos":305110,"start_pos":304656,"strand":"forward"},"name":"bqt1","ortholog_annotations":[{"gene_uniquename":"SJAG_05260","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G9.13c","reference_uniquename":"PMID:21511999"}],"physical_interactions":[{"evidence":"Co-purification","gene_uniquename":"SJAG_03287","interactor_uniquename":"SJAG_05260","reference_uniquename":"PMID:23337086","throughput":"low"}],"product":"bouquet formation protein Bqt1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:23337086":null},"subset_termids":["GO:0005694","GO:0005829","GO:0060090","GO:0005634","GO:0015630","GO:0005816","GO:0140013"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005515":null,"GO:0005634":null,"GO:0005829":null,"GO:0030674":null,"GO:0032121":null,"GO:0035974":null,"GO:0051321":null,"GO:0110092":null,"GO:0140445":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05260.1"],"transcripts_by_uniquename":{"SJAG_05260.1":null},"uniprot_identifier":"B6K1X7","uniquename":"SJAG_05260"}


id: SJAG_05261
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91072],"is_not":false,"summary":null,"term":"GO:0000266"},{"annotations":[91073],"is_not":false,"summary":null,"term":"GO:0090149"},{"annotations":[91074],"is_not":false,"summary":null,"term":"GO:0000423"}],"cellular_component":[{"annotations":[91069],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[91070],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[91071],"is_not":false,"summary":null,"term":"GO:0005758"}],"molecular_function":[{"annotations":[91075],"is_not":false,"summary":null,"term":"GO:0008289"},{"annotations":[91076],"is_not":false,"summary":null,"term":"GO:0140912"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB07191","EnsemblGenomes-Gn:SJAG_05261","UniProtKB/TrEMBL:B6K210","InterPro:IPR013726"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"alp31","uniquename":"SJAG_02270"},{"name":"rmt2","uniquename":"SJAG_02271"},{"name":"dsk2","uniquename":"SJAG_07000"},{"uniquename":"SJAG_05889"},{"name":"nsp1","uniquename":"SJAG_02274"},{"name":"atg44","uniquename":"SJAG_05261"},{"name":"dhp1","uniquename":"SJAG_02275"},{"uniquename":"SJAG_02276"},{"name":"cnt6","uniquename":"SJAG_02277"},{"name":"rga2","uniquename":"SJAG_02278"},{"name":"smb1","uniquename":"SJAG_02279"}],"genes_by_uniquename":{"SJAG_05261":null,"SPAC26A3.14c":null,"YIL156W-B":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08520","interpro_id":"IPR013726","interpro_name":"Mitofissin","interpro_type":"Family","locations":[{"end":70,"score":8.999999682835267e-24,"start":4}],"model":"PF08520","name":"Fungal protein of unknown function (DUF1748)"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28075","interpro_id":"IPR013726","interpro_name":"Mitofissin","interpro_type":"Family","locations":[{"end":71,"score":4.4999998571948514e-20,"start":4}],"model":"PTHR28075:SF1","name":"CHROMOSOME 16, WHOLE GENOME SHOTGUN SEQUENCE"}],"location":{"chromosome_name":"supercont5.1","end_pos":374313,"start_pos":374008,"strand":"forward"},"name":"atg44","ortholog_annotations":[{"gene_uniquename":"SJAG_05261","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC26A3.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05261","ortholog_taxonid":4932,"ortholog_uniquename":"YIL156W-B","reference_uniquename":"PMID:29761456"}],"product":"mitofissin Atg44","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005739","GO:0007005","GO:0061024","GO:0006914","GO:0008289"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000266":null,"GO:0000423":null,"GO:0005737":null,"GO:0005758":null,"GO:0005829":null,"GO:0008289":null,"GO:0090149":null,"GO:0140912":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05261.1"],"transcripts_by_uniquename":{"SJAG_05261.1":null},"uniprot_identifier":"B6K210","uniquename":"SJAG_05261"}


id: SJAG_05264
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74510],"is_not":false,"summary":null,"term":"GO:0006511"}],"cellular_component":[{"annotations":[109762],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[109763],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[74509],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[109764],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[109765],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[109766],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[109767],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K2E3","InterPro:IPR035983","EnsemblGenomes-Tr:EEB07324","EnsemblGenomes-Gn:SJAG_05264","GOA:B6K2E3","InterPro:IPR000569"],"deletion_viability":"unknown","disordered_region_coords":[[20,39],[537,542]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02405"},{"name":"thi5","uniquename":"SJAG_02406"},{"uniquename":"SJAG_05920"},{"name":"abz1","uniquename":"SJAG_02408"},{"name":"stc1","uniquename":"SJAG_02409"},{"name":"mug30","uniquename":"SJAG_05264"},{"uniquename":"SJAG_02412"},{"name":"cyp4","uniquename":"SJAG_02413"},{"name":"atg8","uniquename":"SJAG_02414"},{"name":"rnf10","uniquename":"SJAG_02415"},{"name":"spt16","uniquename":"SJAG_02416"}],"genes_by_uniquename":{"HGNC:26736":null,"SJAG_05264":null,"SPBP8B7.27":null,"YJR036C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.2410.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":650,"score":2.500000007927692e-30,"start":509}],"model":"1c4zA03","name":"Hect, E3 ligase catalytic domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.1750.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":469,"score":1.0000000195414814e-25,"start":339},{"end":507,"score":5.399999736255268e-7,"start":473}],"model":"3olmA01","name":"Hect, E3 ligase catalytic domains"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00632","interpro_id":"IPR000569","interpro_name":"HECT domain","interpro_type":"Domain","locations":[{"end":650,"score":6.6001157669698884e-43,"start":472}],"model":"PF00632","name":"HECT-domain (ubiquitin-transferase)"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50237","interpro_id":"IPR000569","interpro_name":"HECT domain","interpro_type":"Domain","locations":[{"end":464,"score":0.0,"start":416},{"end":650,"score":0.0,"start":472}],"model":"PS50237","name":"HECT domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11254","interpro_id":"IPR050409","interpro_name":"E3 ubiquitin-protein ligase","interpro_type":"Family","locations":[{"end":462,"score":0.0,"start":352}],"model":"PTHR11254:SF438","name":"HECT DOMAIN UBIQUITIN-PROTEIN LIGASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00119","interpro_id":"IPR000569","interpro_name":"HECT domain","interpro_type":"Domain","locations":[{"end":650,"score":3.100000074349185e-12,"start":414}],"model":"SM00119","name":"Domain Homologous to E6-AP Carboxyl Terminus with"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56204","interpro_id":"IPR035983","interpro_name":"HECT, E3 ligase catalytic domain","interpro_type":"Homologous_superfamily","locations":[{"end":644,"score":0.0,"start":378}],"model":"0048334","name":"Hect, E3 ligase catalytic domain"}],"location":{"chromosome_name":"supercont5.1","end_pos":683060,"start_pos":680650,"strand":"reverse"},"name":"mug30","ortholog_annotations":[{"gene_uniquename":"SJAG_05264","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26736","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05264","ortholog_taxonid":4896,"ortholog_uniquename":"SPBP8B7.27","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05264","ortholog_taxonid":4932,"ortholog_uniquename":"YJR036C","reference_uniquename":"PMID:29761456"}],"product":"HECT-type ubiquitin-protein ligase E3, found in association with TRAMP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0019787","GO:0005634","GO:0030163","GO:0005816","GO:0016746","GO:0140096","GO:0015630"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0006511":null,"GO:0008270":null,"GO:0032153":null,"GO:0044732":null,"GO:0051286":null,"GO:0061630":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05264.1"],"transcripts_by_uniquename":{"SJAG_05264.1":null},"uniprot_identifier":"B6K2E3","uniquename":"SJAG_05264"}


id: SJAG_05265
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90909],"is_not":false,"summary":null,"term":"GO:0002184"},{"annotations":[90910],"is_not":false,"summary":null,"term":"GO:0045905"}],"cellular_component":[{"annotations":[90906],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[90907],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[90908],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[90911],"is_not":false,"summary":null,"term":"GO:0106156"},{"annotations":[90912],"is_not":false,"summary":null,"term":"GO:0043565"}]},"deletion_viability":"unknown","disordered_region_coords":[[1,5],[28,41],[44,45]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02438"},{"name":"atp19","uniquename":"SJAG_07003"},{"name":"pcf3","uniquename":"SJAG_02439"},{"name":"meu29","uniquename":"SJAG_02440"},{"name":"atg101","uniquename":"SJAG_02441"},{"name":"jmj1","uniquename":"SJAG_05265"},{"name":"ddr48","uniquename":"SJAG_02442"},{"name":"avl9","uniquename":"SJAG_02443"},{"name":"gpa2","uniquename":"SJAG_02444"},{"uniquename":"SJAG_02445"},{"uniquename":"SJAG_02446"}],"genes_by_uniquename":{"HGNC:25724":null,"SJAG_05265":null,"SPAC25H1.02":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.120.650","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":252,"score":0.0,"start":1}],"model":"6fqcA01","name":"Cupin"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02373","interpro_id":"IPR003347","interpro_name":"JmjC domain","interpro_type":"Domain","locations":[{"end":250,"score":2.3999999240026902e-14,"start":143}],"model":"PF02373","name":"JmjC domain, hydroxylase"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51184","interpro_id":"IPR003347","interpro_name":"JmjC domain","interpro_type":"Domain","locations":[{"end":267,"score":0.0,"start":100}],"model":"PS51184","name":"JmjC domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12480","interpro_id":"IPR050910","interpro_name":"JMJD6 family arginine demethylases/lysyl-hydroxylases","interpro_type":"Family","locations":[{"end":317,"score":0.0,"start":1}],"model":"PTHR12480:SF6","name":"ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00558","interpro_id":"IPR003347","interpro_name":"JmjC domain","interpro_type":"Domain","locations":[{"end":267,"score":5.499999957255612e-28,"start":100}],"model":"SM00558","name":"A domain family that is part of the cupin metalloenzyme superfamily."},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51197","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":277,"score":1.0000000180025095e-35,"start":3}],"model":"0047105","name":"Clavaminate synthase-like"}],"location":{"chromosome_name":"supercont5.1","end_pos":749282,"start_pos":748098,"strand":"reverse"},"name":"jmj1","ortholog_annotations":[{"gene_uniquename":"SJAG_05265","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25724","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05265","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC25H1.02","reference_uniquename":"PMID:21511999"}],"product":"2-oxoglutarate- and Fe(II)-dependent oxygenase Jmj1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140096","GO:0002181","GO:0016491","GO:0005634","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0002184":null,"GO:0005634":null,"GO:0005737":null,"GO:0043565":null,"GO:0045905":null,"GO:0106156":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05265.1"],"transcripts_by_uniquename":{"SJAG_05265.1":null},"uniprot_identifier":"B6K2H3","uniquename":"SJAG_05265"}


id: SJAG_05266
data:
  {"coiled_coil_coords":[[110,130],[142,162]],"cv_annotations":{"biological_process":[{"annotations":[96619],"is_not":false,"summary":null,"term":"GO:1990758"},{"annotations":[96620],"is_not":false,"summary":null,"term":"GO:1990976"},{"annotations":[96621],"is_not":false,"summary":null,"term":"GO:0051455"}],"cellular_component":[{"annotations":[96611],"is_not":false,"summary":null,"term":"GO:0000779"},{"annotations":[96612],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[96613],"is_not":false,"summary":null,"term":"GO:0042729"},{"annotations":[96614],"is_not":false,"summary":null,"term":"GO:0000776"},{"annotations":[96615],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[96616],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[96617],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[96618],"is_not":false,"summary":null,"term":"GO:0005876"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05266","GOA:B6K2J9","UniProtKB/TrEMBL:B6K2J9","EnsemblGenomes-Tr:EEB07380"],"deletion_viability":"unknown","disordered_region_coords":[[5,6],[9,27],[29,30],[40,48],[50,58],[131,141]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mhf2","uniquename":"SJAG_02465"},{"name":"swc5","uniquename":"SJAG_02466"},{"name":"dph5","uniquename":"SJAG_02467"},{"name":"ksg1","uniquename":"SJAG_02468"},{"name":"lsm2","uniquename":"SJAG_02469"},{"name":"spc34","uniquename":"SJAG_05266"},{"uniquename":"SJAG_05267"},{"name":"oxr1","uniquename":"SJAG_02470"},{"name":"tif225","uniquename":"SJAG_02471"},{"name":"prr1","uniquename":"SJAG_02472"},{"name":"mrs3","uniquename":"SJAG_02473"}],"genes_by_uniquename":{"SJAG_05266":null,"SPAC8C9.17c":null,"YKR037C":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.1","end_pos":801719,"start_pos":801222,"strand":"forward"},"low_complexity_region_coords":[[145,159]],"name":"spc34","ortholog_annotations":[{"gene_uniquename":"SJAG_05266","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC8C9.17c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05266","ortholog_taxonid":4932,"ortholog_uniquename":"YKR037C","reference_uniquename":"PMID:29761456"}],"product":"DASH complex subunit Spc34","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0000070","GO:0140013","GO:0072686","GO:0005816","GO:0005829","GO:0005634","GO:0005694","GO:0015630","GO:0000776"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000776":null,"GO:0000779":null,"GO:0005634":null,"GO:0005829":null,"GO:0005876":null,"GO:0042729":null,"GO:0044732":null,"GO:0051455":null,"GO:0072686":null,"GO:1990758":null,"GO:1990976":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05266.1"],"transcripts_by_uniquename":{"SJAG_05266.1":null},"uniprot_identifier":"B6K2J9","uniquename":"SJAG_05266"}


id: SJAG_05267
data:
  {"coiled_coil_coords":[[80,107]],"cv_annotations":{},"deletion_viability":"unknown","disordered_region_coords":[[33,38],[45,57],[73,79],[146,163]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"swc5","uniquename":"SJAG_02466"},{"name":"dph5","uniquename":"SJAG_02467"},{"name":"ksg1","uniquename":"SJAG_02468"},{"name":"lsm2","uniquename":"SJAG_02469"},{"name":"spc34","uniquename":"SJAG_05266"},{"uniquename":"SJAG_05267"},{"name":"oxr1","uniquename":"SJAG_02470"},{"name":"tif225","uniquename":"SJAG_02471"},{"name":"prr1","uniquename":"SJAG_02472"},{"name":"mrs3","uniquename":"SJAG_02473"},{"name":"emr1","uniquename":"SJAG_05268"}],"genes_by_uniquename":{"SJAG_05267":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.1","end_pos":802217,"start_pos":801738,"strand":"forward"},"low_complexity_region_coords":[[134,145]],"product":"dubious","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_05267.1"],"transcripts_by_uniquename":{"SJAG_05267.1":null},"uniprot_identifier":"B6K2K0","uniquename":"SJAG_05267"}


id: SJAG_05268
data:
  {"cv_annotations":{"biological_process":[{"annotations":[96624],"is_not":false,"summary":null,"term":"GO:0120010"},{"annotations":[96625],"is_not":false,"summary":null,"term":"GO:0007008"}],"cellular_component":[{"annotations":[96622],"is_not":false,"summary":null,"term":"GO:0032473"},{"annotations":[96623],"is_not":false,"summary":null,"term":"GO:0005741"}]},"dbxrefs":["GOA:B6K2K5","EnsemblGenomes-Tr:EEB07386","UniProtKB/TrEMBL:B6K2K5","InterPro:IPR035195","EnsemblGenomes-Gn:SJAG_05268"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05267"},{"name":"oxr1","uniquename":"SJAG_02470"},{"name":"tif225","uniquename":"SJAG_02471"},{"name":"prr1","uniquename":"SJAG_02472"},{"name":"mrs3","uniquename":"SJAG_02473"},{"name":"emr1","uniquename":"SJAG_05268"},{"name":"fra2","uniquename":"SJAG_02474"},{"name":"rrp14","uniquename":"SJAG_02475"},{"name":"mug129a","uniquename":"SJAG_02476"},{"name":"mug129b","uniquename":"SJAG_05269"},{"name":"rps502","uniquename":"SJAG_02477"}],"genes_by_uniquename":{"SJAG_05268":null,"SPAC8C9.19":null,"YJL127C-B":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF17237","interpro_id":"IPR035195","interpro_name":"ERMES regulator 1","interpro_type":"Family","locations":[{"end":44,"score":1.3000000492180588e-18,"start":2}],"model":"PF17237","name":"ERMES regulator 1"}],"location":{"chromosome_name":"supercont5.1","end_pos":811885,"start_pos":811640,"strand":"reverse"},"low_complexity_region_coords":[[12,27]],"name":"emr1","ortholog_annotations":[{"gene_uniquename":"SJAG_05268","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC8C9.19","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05268","ortholog_taxonid":4932,"ortholog_uniquename":"YJL127C-B","reference_uniquename":"PMID:29761456"}],"product":"Ermes regulator Emr1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0007005","GO:0005739","GO:0061024"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005741":null,"GO:0007008":null,"GO:0032473":null,"GO:0120010":null},"tm_domain_coords":[[26,43]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05268.1"],"transcripts_by_uniquename":{"SJAG_05268.1":null},"uniprot_identifier":"B6K2K5","uniquename":"SJAG_05268"}


id: SJAG_05269
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[96572],"is_not":false,"summary":null,"term":"GO:0005737"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K2K9","EnsemblGenomes-Gn:SJAG_05269","EnsemblGenomes-Tr:EEB07390"],"deletion_viability":"unknown","disordered_region_coords":[[19,20]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrs3","uniquename":"SJAG_02473"},{"name":"emr1","uniquename":"SJAG_05268"},{"name":"fra2","uniquename":"SJAG_02474"},{"name":"rrp14","uniquename":"SJAG_02475"},{"name":"mug129a","uniquename":"SJAG_02476"},{"name":"mug129b","uniquename":"SJAG_05269"},{"name":"rps502","uniquename":"SJAG_02477"},{"name":"adg3","uniquename":"SJAG_02478"},{"name":"rps003","uniquename":"SJAG_02479"},{"name":"cox14","uniquename":"SJAG_02480"},{"name":"cgs2","uniquename":"SJAG_02481"}],"genes_by_uniquename":{"SJAG_05269":null,"SPAC8C9.09c":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.1","end_pos":815975,"start_pos":815163,"strand":"forward"},"name":"mug129b","ortholog_annotations":[{"gene_uniquename":"SJAG_05269","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC8C9.09c"}],"product":"Mug129-like protein Mug129b","references_by_uniquename":{"GO_REF:0000107":null},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05269.1"],"transcripts_by_uniquename":{"SJAG_05269.1":null},"uniprot_identifier":"B6K2K9","uniquename":"SJAG_05269"}


id: SJAG_05270
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110802],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[110801],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[110803],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["GOA:B6K2P0","InterPro:IPR040049","EnsemblGenomes-Tr:EEB07421","UniProtKB/TrEMBL:B6K2P0","EnsemblGenomes-Gn:SJAG_05270","InterPro:IPR007741"],"deletion_viability":"unknown","disordered_region_coords":[[113,118]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pre8","uniquename":"SJAG_02502"},{"name":"wss2","uniquename":"SJAG_02503"},{"name":"cox12","uniquename":"SJAG_02504"},{"name":"trp3","uniquename":"SJAG_02505"},{"name":"rpb3","uniquename":"SJAG_02506"},{"name":"mrp49","uniquename":"SJAG_05270"},{"name":"tsf1","uniquename":"SJAG_05271"},{"name":"brx1","uniquename":"SJAG_02508"},{"name":"atb2","uniquename":"SJAG_02509"},{"name":"rpl43a","uniquename":"SJAG_02510"},{"name":"ede1","uniquename":"SJAG_02511"}],"genes_by_uniquename":{"HGNC:14511":null,"SJAG_05270":null,"SPCC1442.19":null,"YKL167C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13274","interpro_id":"IPR040049","interpro_name":"Ribosomal subunit protein mS25/mL61, mitochondrial","interpro_type":"Family","locations":[{"end":111,"score":1.8000000700569598e-14,"start":12}],"model":"PTHR13274:SF2","name":"MITOCHONDRIAL RIBOSOMAL PROTEIN S25"}],"location":{"chromosome_name":"supercont5.1","end_pos":871608,"start_pos":871208,"strand":"forward"},"name":"mrp49","ortholog_annotations":[{"gene_uniquename":"SJAG_05270","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14511","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05270","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1442.19","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05270","ortholog_taxonid":4932,"ortholog_uniquename":"YKL167C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit Mrp49","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005198","GO:0005739","GO:0140053"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005762":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05270.1"],"transcripts_by_uniquename":{"SJAG_05270.1":null},"uniprot_identifier":"B6K2P0","uniquename":"SJAG_05270"}


id: SJAG_05271
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108242],"is_not":false,"summary":null,"term":"GO:0032543"},{"annotations":[108243],"is_not":false,"summary":null,"term":"GO:0070125"}],"cellular_component":[{"annotations":[108241],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[108244],"is_not":false,"summary":null,"term":"GO:0003746"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05271","GOA:B6K2P1","InterPro:IPR036402","UniProtKB/Swiss-Prot:B6K2P1","EnsemblGenomes-Tr:EEB07422","InterPro:IPR001816","InterPro:IPR014039"],"deletion_viability":"unknown","disordered_region_coords":[[226,231]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"wss2","uniquename":"SJAG_02503"},{"name":"cox12","uniquename":"SJAG_02504"},{"name":"trp3","uniquename":"SJAG_02505"},{"name":"rpb3","uniquename":"SJAG_02506"},{"name":"mrp49","uniquename":"SJAG_05270"},{"name":"tsf1","uniquename":"SJAG_05271"},{"name":"brx1","uniquename":"SJAG_02508"},{"name":"atb2","uniquename":"SJAG_02509"},{"name":"rpl43a","uniquename":"SJAG_02510"},{"name":"ede1","uniquename":"SJAG_02511"},{"uniquename":"SJAG_02512"}],"genes_by_uniquename":{"HGNC:12367":null,"SJAG_05271":null,"SPBC800.07c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.8.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":105,"score":6.599999835543713e-8,"start":48}],"model":"1xb2B01","name":"DNA helicase RuvA subunit, C-terminal domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.479.20","interpro_id":"IPR036402","interpro_name":"Elongation factor Ts, dimerisation domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":235,"score":3.5999998754161235e-17,"start":106}],"model":"1xb2B02","name":"Elongation factor Ts, dimerisation domain"},{"dbname":"HAMAP","evidence":"PrfScan","id":"MF_00050","interpro_id":"IPR001816","interpro_name":"Translation elongation factor EFTs/EF1B","interpro_type":"Family","locations":[{"end":310,"score":0.0,"start":51}],"model":"MF_00050","name":"Elongation factor Ts [tsf]"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00889","interpro_id":"IPR014039","interpro_name":"Translation elongation factor EFTs/EF1B, dimerisation","interpro_type":"Domain","locations":[{"end":275,"score":5.600000172779895e-13,"start":121}],"model":"PF00889","name":"Elongation factor TS"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11741","interpro_id":"IPR001816","interpro_name":"Translation elongation factor EFTs/EF1B","interpro_type":"Family","locations":[{"end":286,"score":8.499999650795961e-33,"start":38}],"model":"PTHR11741:SF0","name":"ELONGATION FACTOR TS"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54713","interpro_id":"IPR036402","interpro_name":"Elongation factor Ts, dimerisation domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":307,"score":9.810000170052194e-14,"start":102}],"model":"0050903","name":"Elongation factor Ts (EF-Ts), dimerisation domain"}],"location":{"chromosome_name":"supercont5.1","end_pos":872693,"start_pos":871761,"strand":"forward"},"low_complexity_region_coords":[[91,103],[142,154]],"name":"tsf1","ortholog_annotations":[{"gene_uniquename":"SJAG_05271","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12367","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05271","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC800.07c","reference_uniquename":"PMID:21511999"}],"product":"mitochondrial translation elongation factor EF-Ts Tsf1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005739","GO:0045182","GO:0140053"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003746":null,"GO:0005739":null,"GO:0032543":null,"GO:0070125":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05271.1"],"transcripts_by_uniquename":{"SJAG_05271.1":null},"uniprot_identifier":"B6K2P1","uniquename":"SJAG_05271"}


id: SJAG_05272
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114833],"is_not":false,"summary":null,"term":"GO:0016052"},{"annotations":[114834],"is_not":false,"summary":null,"term":"GO:0009272"}],"cellular_component":[{"annotations":[114832],"is_not":false,"summary":null,"term":"GO:0009897"}],"molecular_function":[{"annotations":[114835],"is_not":false,"summary":null,"term":"GO:0008496"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB07469","GOA:B6K0J8","UniProtKB/TrEMBL:B6K0J8","InterPro:IPR008928","InterPro:IPR014480","EnsemblGenomes-Gn:SJAG_05272","InterPro:IPR005198"],"deletion_viability":"unknown","disordered_region_coords":[[104,105],[135,136]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"asi1","uniquename":"SJAG_02550"},{"name":"pin1","uniquename":"SJAG_02551"},{"uniquename":"SJAG_05950"},{"name":"pop23","uniquename":"SJAG_02553"},{"name":"scw1","uniquename":"SJAG_02554"},{"name":"dcw1","uniquename":"SJAG_05272"},{"name":"mis18","uniquename":"SJAG_05273"},{"name":"rad16","uniquename":"SJAG_02556"},{"uniquename":"SJAG_02557"},{"name":"prp11","uniquename":"SJAG_02558"},{"uniquename":"SJAG_02559"}],"genes_by_uniquename":{"SJAG_05272":null,"SPCC970.02":null,"YKL046C":null,"YMR238W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.50.10.20","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":385,"score":2.802596928649634e-45,"start":29}],"model":"4c1sA00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03663","interpro_id":"IPR005198","interpro_name":"Glycoside hydrolase, family 76","interpro_type":"Family","locations":[{"end":392,"score":0.0,"start":28}],"model":"PF03663","name":"Glycosyl hydrolase family 76"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF016302","interpro_id":"IPR014480","interpro_name":"Mannan endo-1,6-alpha-mannosidase","interpro_type":"Family","locations":[{"end":419,"score":0.0,"start":2}],"model":"PIRSF016302","name":"Mannan endo-1,6-alpha-mannosidase"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12145","interpro_id":"IPR014480","interpro_name":"Mannan endo-1,6-alpha-mannosidase","interpro_type":"Family","locations":[{"end":414,"score":0.0,"start":3}],"model":"PTHR12145:SF36","name":"UNCHARACTERIZED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48208","interpro_id":"IPR008928","interpro_name":"Six-hairpin glycosidase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":376,"score":0.0,"start":37}],"model":"0048326","name":"Six-hairpin glycosidases"}],"location":{"chromosome_name":"supercont5.1","end_pos":971436,"start_pos":969981,"strand":"reverse"},"low_complexity_region_coords":[[7,15]],"name":"dcw1","ortholog_annotations":[{"gene_uniquename":"SJAG_05272","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC970.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05272","ortholog_taxonid":4932,"ortholog_uniquename":"YKL046C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05272","ortholog_taxonid":4932,"ortholog_uniquename":"YMR238W","reference_uniquename":"PMID:26896847"}],"product":"mannan endo-1,6-alpha-mannosidase Dcw1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005886","GO:0005975","GO:0016798","GO:0071554","GO:0009986"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0008496":null,"GO:0009272":null,"GO:0009897":null,"GO:0016052":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05272.1"],"transcripts_by_uniquename":{"SJAG_05272.1":null},"uniprot_identifier":"B6K0J8","uniquename":"SJAG_05272"}


id: SJAG_05273
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114909],"is_not":false,"summary":null,"term":"GO:0034080"},{"annotations":[114910],"is_not":false,"summary":null,"term":"GO:0007059"}],"cellular_component":[{"annotations":[114906],"is_not":false,"summary":null,"term":"GO:0098654"},{"annotations":[114907],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[114908],"is_not":false,"summary":null,"term":"GO:0000776"}],"molecular_function":[{"annotations":[114911],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["GOA:B6K0J9","UniProtKB/TrEMBL:B6K0J9","EnsemblGenomes-Tr:EEB07470","EnsemblGenomes-Gn:SJAG_05273","InterPro:IPR004910","InterPro:IPR034752"],"deletion_viability":"unknown","disordered_region_coords":[[3,5],[177,195]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pin1","uniquename":"SJAG_02551"},{"uniquename":"SJAG_05950"},{"name":"pop23","uniquename":"SJAG_02553"},{"name":"scw1","uniquename":"SJAG_02554"},{"name":"dcw1","uniquename":"SJAG_05272"},{"name":"mis18","uniquename":"SJAG_05273"},{"name":"rad16","uniquename":"SJAG_02556"},{"uniquename":"SJAG_02557"},{"name":"prp11","uniquename":"SJAG_02558"},{"uniquename":"SJAG_02559"},{"name":"cwf23","uniquename":"SJAG_02560"}],"genes_by_uniquename":{"HGNC:1286":null,"SJAG_05273":null,"SPCC970.12":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03226","interpro_id":"IPR004910","interpro_name":"Yippee/Mis18/Cereblon","interpro_type":"Domain","locations":[{"end":122,"score":1.4999999523982838e-22,"start":23}],"model":"PF03226","name":"Yippee zinc-binding/DNA-binding /Mis18, centromere assembly"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51793","interpro_id":"IPR034752","interpro_name":"Mis18 domain","interpro_type":"Domain","locations":[{"end":118,"score":0.0,"start":22}],"model":"PS51793","name":"Mis18 domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR16431","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":180,"score":1.3999999965049207e-35,"start":8}],"model":"PTHR16431:SF1","name":"NEUROGENIC PROTEIN MASTERMIND"}],"location":{"chromosome_name":"supercont5.1","end_pos":972367,"start_pos":971641,"strand":"reverse"},"name":"mis18","ortholog_annotations":[{"gene_uniquename":"SJAG_05273","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1286","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05273","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC970.12","reference_uniquename":"PMID:21511999"}],"product":"kinetochore protein Mis18","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0006325","GO:0065003","GO:0000776","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000776":null,"GO:0000785":null,"GO:0007059":null,"GO:0008270":null,"GO:0034080":null,"GO:0098654":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05273.1"],"transcripts_by_uniquename":{"SJAG_05273.1":null},"uniprot_identifier":"B6K0J9","uniquename":"SJAG_05273"}


id: SJAG_05274
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101379],"is_not":false,"summary":null,"term":"GO:0036503"},{"annotations":[101380],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[101377],"is_not":false,"summary":null,"term":"GO:0005938"},{"annotations":[101378],"is_not":false,"summary":null,"term":"GO:0000836"}],"molecular_function":[{"annotations":[101381],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[101382],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05274","EnsemblGenomes-Tr:EEB07543","GOA:B6K0S2","InterPro:IPR001841","InterPro:IPR013083","InterPro:IPR024766","UniProtKB/TrEMBL:B6K0S2"],"deletion_viability":"unknown","disordered_region_coords":[[277,280],[304,320],[352,356],[393,399],[403,413],[420,428],[430,457],[499,528],[361,373],[476,488]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pil1","uniquename":"SJAG_02626"},{"name":"spp2","uniquename":"SJAG_02627"},{"name":"tif301","uniquename":"SJAG_02628"},{"name":"nto1","uniquename":"SJAG_02629"},{"name":"pxp2","uniquename":"SJAG_02630"},{"name":"hrd1","uniquename":"SJAG_05274"},{"name":"nep1","uniquename":"SJAG_05977"},{"name":"psl1","uniquename":"SJAG_05978"},{"name":"trm6","uniquename":"SJAG_02637"},{"name":"sum2","uniquename":"SJAG_02638"},{"uniquename":"SJAG_02639"}],"genes_by_uniquename":{"HGNC:20738":null,"SJAG_05274":null,"SPBC17D11.02c":null,"YOL013C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.40.10","interpro_id":"IPR013083","interpro_name":"Zinc finger, RING/FYVE/PHD-type","interpro_type":"Homologous_superfamily","locations":[{"end":364,"score":1.1000000155791727e-22,"start":264}],"model":"2lxhC00","name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF12678","interpro_id":"IPR024766","interpro_name":"Zinc finger, RING-H2-type","interpro_type":"Domain","locations":[{"end":351,"score":0.000012999999853491317,"start":291}],"model":"PF12678","name":"RING-H2 zinc finger domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50089","interpro_id":"IPR001841","interpro_name":"Zinc finger, RING-type","interpro_type":"Domain","locations":[{"end":351,"score":0.0,"start":292}],"model":"PS50089","name":"Zinc finger RING-type profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR22763","interpro_id":"IPR050731","interpro_name":"HRD1 family E3 ubiquitin-protein ligases","interpro_type":"Family","locations":[{"end":358,"score":0.0,"start":5}],"model":"PTHR22763:SF184","name":"RING ZINC FINGER PROTEIN"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00184","interpro_id":"IPR001841","interpro_name":"Zinc finger, RING-type","interpro_type":"Domain","locations":[{"end":350,"score":1.8000000068241206e-7,"start":292}],"model":"SM00184","name":"Ring finger"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57850","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":357,"score":3.5299999849125226e-19,"start":272}],"model":"0050087","name":"RING/U-box"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd16479","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":351,"score":3.3859000573401204e-22,"start":289}],"model":"cd16479","name":"RING finger, H2 subclass, found in synoviolin and similar proteins"}],"location":{"chromosome_name":"supercont5.1","end_pos":1148062,"start_pos":1146198,"strand":"forward"},"low_complexity_region_coords":[[95,99],[374,392],[489,498]],"name":"hrd1","ortholog_annotations":[{"gene_uniquename":"SJAG_05274","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20738","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05274","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC17D11.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05274","ortholog_taxonid":4932,"ortholog_uniquename":"YOL013C","reference_uniquename":"PMID:29761456"}],"product":"Hrd1 ubiquitin ligase complex E3 subunit Hrd1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005783","GO:0005938","GO:0030163","GO:0016746","GO:0019787","GO:0005789","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000836":null,"GO:0005938":null,"GO:0008270":null,"GO:0036503":null,"GO:0043161":null,"GO:0061630":null},"tm_domain_coords":[[4,26],[38,60],[99,121],[142,164],[174,196],[224,246]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05274.1"],"transcripts_by_uniquename":{"SJAG_05274.1":null},"uniprot_identifier":"B6K0S2","uniquename":"SJAG_05274"}


id: SJAG_05276
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109679],"is_not":false,"summary":null,"term":"GO:0000380"},{"annotations":[109680],"is_not":false,"summary":null,"term":"GO:0000184"},{"annotations":[109681],"is_not":false,"summary":null,"term":"GO:0006364"}],"cellular_component":[{"annotations":[109675],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[109676],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[109677],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[109678],"is_not":false,"summary":null,"term":"GO:1990904"}],"molecular_function":[{"annotations":[109682],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[109683],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[109684],"is_not":false,"summary":null,"term":"GO:0003729"},{"annotations":[109685],"is_not":false,"summary":null,"term":"GO:0003724"}]},"dbxrefs":["GOA:B6K0V4","InterPro:IPR001650","InterPro:IPR011545","InterPro:IPR027417","InterPro:IPR014014","EnsemblGenomes-Gn:SJAG_05276","InterPro:IPR014001","InterPro:IPR000629","UniProtKB/TrEMBL:B6K0V4","EnsemblGenomes-Tr:EEB07575"],"deletion_viability":"unknown","disordered_region_coords":[[86,87],[92,100],[103,107],[110,112],[122,125],[175,176],[383,385],[480,483],[497,497],[509,512],[564,574],[1,31],[523,528]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fta3","uniquename":"SJAG_02664"},{"name":"vac7","uniquename":"SJAG_02665"},{"uniquename":"SJAG_02666"},{"name":"dpb2","uniquename":"SJAG_02667"},{"name":"mpe1","uniquename":"SJAG_02668"},{"name":"dbp2","uniquename":"SJAG_05276"},{"name":"ifh1","uniquename":"SJAG_02671"},{"name":"alp21","uniquename":"SJAG_02672"},{"uniquename":"SJAG_02673"},{"name":"pll7","uniquename":"SJAG_02675"},{"name":"gpp11","uniquename":"SJAG_02676"}],"genes_by_uniquename":{"HGNC:2740":null,"HGNC:2746":null,"SJAG_05276":null,"SPBP8B7.16c":null,"YNL112W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":356,"score":0.0,"start":120},{"end":531,"score":0.0,"start":357}],"model":"3fe2A00","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00270","interpro_id":"IPR011545","interpro_name":"DEAD/DEAH box helicase domain","interpro_type":"Domain","locations":[{"end":341,"score":0.0,"start":171}],"model":"PF00270","name":"DEAD/DEAH box helicase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00271","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal domain-like","interpro_type":"Domain","locations":[{"end":489,"score":4.599999894216332e-28,"start":386}],"model":"PF00271","name":"Helicase conserved C-terminal domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00039","interpro_id":"IPR000629","interpro_name":"ATP-dependent RNA helicase DEAD-box, conserved site","interpro_type":"Conserved_site","locations":[{"end":307,"score":0.0,"start":299}],"model":"PS00039","name":"DEAD-box subfamily ATP-dependent helicases signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51192","interpro_id":"IPR014001","interpro_name":"Helicase superfamily 1/2, ATP-binding domain","interpro_type":"Domain","locations":[{"end":353,"score":0.0,"start":178}],"model":"PS51192","name":"Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51194","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal domain-like","interpro_type":"Domain","locations":[{"end":528,"score":0.0,"start":385}],"model":"PS51194","name":"Superfamilies 1 and 2 helicase C-terminal domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51195","interpro_id":"IPR014014","interpro_name":"RNA helicase, DEAD-box type, Q motif","interpro_type":"Domain","locations":[{"end":175,"score":0.0,"start":147}],"model":"PS51195","name":"DEAD-box RNA helicase Q motif profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR47958","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":528,"score":0.0,"start":130}],"model":"PTHR47958:SF150","name":"ATP-DEPENDENT RNA HELICASE DBP3"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00487","interpro_id":"IPR014001","interpro_name":"Helicase superfamily 1/2, ATP-binding domain","interpro_type":"Domain","locations":[{"end":369,"score":0.0,"start":166}],"model":"SM00487","name":"DEAD-like helicases superfamily"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00490","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal domain-like","interpro_type":"Domain","locations":[{"end":489,"score":3.4000000325099397e-35,"start":408}],"model":"SM00490","name":"helicase superfamily c-terminal domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":506,"score":0.0,"start":219}],"model":"0050677","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd17966","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":354,"score":0.0,"start":158}],"model":"cd17966","name":"DEAD-box helicase domain of ATP-dependent RNA helicases DDX5 and DDX17"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd18787","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":498,"score":0.0,"start":366}],"model":"cd18787","name":"C-terminal helicase domain of the DEAD box helicases"}],"location":{"chromosome_name":"supercont5.1","end_pos":1218831,"start_pos":1216359,"strand":"reverse"},"low_complexity_region_coords":[[32,85],[490,496],[529,563]],"name":"dbp2","ortholog_annotations":[{"gene_uniquename":"SJAG_05276","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2740","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05276","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2746","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05276","ortholog_taxonid":4896,"ortholog_uniquename":"SPBP8B7.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05276","ortholog_taxonid":4932,"ortholog_uniquename":"YNL112W","reference_uniquename":"PMID:29761456"}],"product":"ATP-dependent RNA helicase Dbp2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016071","GO:0140098","GO:0005634","GO:0005730","GO:0005829","GO:0016887","GO:0042254"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000184":null,"GO:0000380":null,"GO:0003724":null,"GO:0003729":null,"GO:0005524":null,"GO:0005634":null,"GO:0005730":null,"GO:0005829":null,"GO:0006364":null,"GO:0016887":null,"GO:1990904":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05276.1"],"transcripts_by_uniquename":{"SJAG_05276.1":null},"uniprot_identifier":"B6K0V4","uniquename":"SJAG_05276"}


id: SJAG_05277
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88320],"is_not":false,"summary":null,"term":"GO:0015937"}],"cellular_component":[{"annotations":[88318],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[88319],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[88321],"is_not":false,"summary":null,"term":"GO:0004140"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05277","GOA:B6K169","InterPro:IPR004821","InterPro:IPR014729","UniProtKB/TrEMBL:B6K169","EnsemblGenomes-Tr:EEB07690"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_06013"},{"name":"any2","uniquename":"SJAG_02789"},{"uniquename":"SJAG_02790"},{"name":"ser1","uniquename":"SJAG_02791"},{"uniquename":"SJAG_02792"},{"name":"cab4","uniquename":"SJAG_05277"},{"name":"gpi17","uniquename":"SJAG_05278"},{"uniquename":"SJAG_02794"},{"name":"ppc89","uniquename":"SJAG_02795"},{"name":"pyk1","uniquename":"SJAG_02796"},{"uniquename":"SJAG_02797"}],"genes_by_uniquename":{"HGNC:29932":null,"SJAG_05277":null,"SPAC1F12.08":null,"YGR277C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.620","interpro_id":"IPR014729","interpro_name":"Rossmann-like alpha/beta/alpha sandwich fold","interpro_type":"Homologous_superfamily","locations":[{"end":231,"score":9.100032227325362e-41,"start":81}],"model":"3do8A00","name":"HUPs"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01467","interpro_id":"IPR004821","interpro_name":"Cytidyltransferase-like domain","interpro_type":"Domain","locations":[{"end":227,"score":8.199999790292622e-9,"start":84}],"model":"PF01467","name":"Cytidylyltransferase-like"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10695","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":226,"score":2.7000001050854396e-15,"start":80}],"model":"PTHR10695:SF64","name":"DEPHOSPHO-COA KINASE-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52374","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":228,"score":4.019999838823188e-17,"start":81}],"model":"0036094","name":"Nucleotidylyl transferase"}],"location":{"chromosome_name":"supercont5.1","end_pos":1480724,"start_pos":1479918,"strand":"forward"},"name":"cab4","ortholog_annotations":[{"gene_uniquename":"SJAG_05277","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29932","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05277","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1F12.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05277","ortholog_taxonid":4932,"ortholog_uniquename":"YGR277C","reference_uniquename":"PMID:29761456"}],"product":"dephospho-CoA kinase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0055086","GO:0016301","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004140":null,"GO:0005634":null,"GO:0005829":null,"GO:0015937":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05277.1"],"transcripts_by_uniquename":{"SJAG_05277.1":null},"uniprot_identifier":"B6K169","uniquename":"SJAG_05277"}


id: SJAG_05278
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88324],"is_not":false,"summary":null,"term":"GO:0016255"}],"cellular_component":[{"annotations":[88322],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[88323],"is_not":false,"summary":null,"term":"GO:0042765"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05278","UniProtKB/TrEMBL:B6K170","EnsemblGenomes-Tr:EEB07691","GOA:B6K170","InterPro:IPR019540"],"deletion_viability":"unknown","disordered_region_coords":[[510,512]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"any2","uniquename":"SJAG_02789"},{"uniquename":"SJAG_02790"},{"name":"ser1","uniquename":"SJAG_02791"},{"uniquename":"SJAG_02792"},{"name":"cab4","uniquename":"SJAG_05277"},{"name":"gpi17","uniquename":"SJAG_05278"},{"uniquename":"SJAG_02794"},{"name":"ppc89","uniquename":"SJAG_02795"},{"name":"pyk1","uniquename":"SJAG_02796"},{"uniquename":"SJAG_02797"},{"name":"swc3","uniquename":"SJAG_02798"}],"genes_by_uniquename":{"HGNC:14937":null,"SJAG_05278":null,"SPAC1F12.09":null,"YDR434W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10510","interpro_id":"IPR019540","interpro_name":"Phosphatidylinositol-glycan biosynthesis class S protein","interpro_type":"Family","locations":[{"end":497,"score":0.0,"start":30}],"model":"PF10510","name":"Phosphatidylinositol-glycan biosynthesis class S protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21072","interpro_id":"IPR019540","interpro_name":"Phosphatidylinositol-glycan biosynthesis class S protein","interpro_type":"Family","locations":[{"end":94,"score":0.0,"start":16}],"model":"PTHR21072:SF13","name":"GPI TRANSAMIDASE COMPONENT PIG-S"}],"location":{"chromosome_name":"supercont5.1","end_pos":1482551,"start_pos":1480886,"strand":"forward"},"name":"gpi17","ortholog_annotations":[{"gene_uniquename":"SJAG_05278","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14937","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05278","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1F12.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05278","ortholog_taxonid":4932,"ortholog_uniquename":"YDR434W","reference_uniquename":"PMID:29761456"}],"product":"pig-S","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005789","GO:0006629","GO:0042158","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0016255":null,"GO:0042765":null},"tm_domain_coords":[[27,49],[471,490]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05278.1"],"transcripts_by_uniquename":{"SJAG_05278.1":null},"uniprot_identifier":"B6K170","uniquename":"SJAG_05278"}


id: SJAG_05279
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[107684],"is_not":false,"summary":null,"term":"GO:0005783"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05279","EnsemblGenomes-Tr:EEB07704","UniProtKB/TrEMBL:B6K183"],"deletion_viability":"unknown","disordered_region_coords":[[50,52],[175,179],[220,222],[227,228],[232,233],[375,376],[378,383],[387,389],[392,393],[160,160]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_02801"},{"name":"rpl27b","uniquename":"SJAG_02802"},{"name":"rps001","uniquename":"SJAG_02803"},{"name":"gpi15","uniquename":"SJAG_02804"},{"name":"aps2","uniquename":"SJAG_02805"},{"uniquename":"SJAG_05279"},{"name":"exo5","uniquename":"SJAG_05280"},{"name":"pic1","uniquename":"SJAG_02807"},{"name":"ppk26","uniquename":"SJAG_02808"},{"name":"mmp2","uniquename":"SJAG_02809"},{"name":"cdc10","uniquename":"SJAG_02810"}],"genes_by_uniquename":{"SJAG_05279":null,"SPBC685.03":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.1","end_pos":1504703,"start_pos":1503330,"strand":"reverse"},"low_complexity_region_coords":[[161,174],[285,293]],"ortholog_annotations":[{"gene_uniquename":"SJAG_05279","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC685.03","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05279.1"],"transcripts_by_uniquename":{"SJAG_05279.1":null},"uniprot_identifier":"B6K183","uniquename":"SJAG_05279"}


id: SJAG_05280
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107679],"is_not":false,"summary":null,"term":"GO:0032042"},{"annotations":[107680],"is_not":false,"summary":null,"term":"GO:0036298"}],"cellular_component":[{"annotations":[107676,107677],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[107678],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[107681],"is_not":false,"summary":null,"term":"GO:0051539"},{"annotations":[107682],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[107683],"is_not":false,"summary":null,"term":"GO:0045145"}]},"dbxrefs":["GOA:B6K184","EnsemblGenomes-Tr:EEB07705","InterPro:IPR019190","UniProtKB/TrEMBL:B6K184","EnsemblGenomes-Gn:SJAG_05280"],"deletion_viability":"unknown","disordered_region_coords":[[66,68],[139,145]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl27b","uniquename":"SJAG_02802"},{"name":"rps001","uniquename":"SJAG_02803"},{"name":"gpi15","uniquename":"SJAG_02804"},{"name":"aps2","uniquename":"SJAG_02805"},{"uniquename":"SJAG_05279"},{"name":"exo5","uniquename":"SJAG_05280"},{"name":"pic1","uniquename":"SJAG_02807"},{"name":"ppk26","uniquename":"SJAG_02808"},{"name":"mmp2","uniquename":"SJAG_02809"},{"name":"cdc10","uniquename":"SJAG_02810"},{"name":"vps52","uniquename":"SJAG_02811"}],"genes_by_uniquename":{"HGNC:26115":null,"SJAG_05280":null,"SPBC685.02":null,"YBR163W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF09810","interpro_id":"IPR019190","interpro_name":"Exonuclease V","interpro_type":"Family","locations":[{"end":200,"score":1.8999999496013172e-31,"start":82},{"end":378,"score":1.4999999866463684e-37,"start":201}],"model":"PF09810","name":"Exonuclease V - a 5' deoxyribonuclease"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR14464","interpro_id":"IPR019190","interpro_name":"Exonuclease V","interpro_type":"Family","locations":[{"end":391,"score":0.0,"start":42}],"model":"PTHR14464:SF4","name":"EXONUCLEASE V"}],"location":{"chromosome_name":"supercont5.1","end_pos":1506286,"start_pos":1504894,"strand":"reverse"},"low_complexity_region_coords":[[155,167]],"name":"exo5","ortholog_annotations":[{"gene_uniquename":"SJAG_05280","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26115","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05280","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC685.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05280","ortholog_taxonid":4932,"ortholog_uniquename":"YBR163W","reference_uniquename":"PMID:29761456"}],"product":"nuclear single stranded DNA specific 5'-3' exodeoxyribonuclease Exo5.1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006310","GO:0005634","GO:0016788","GO:0004527","GO:0006281","GO:0007005","GO:0140097","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003677":null,"GO:0005634":null,"GO:0005739":null,"GO:0032042":null,"GO:0036298":null,"GO:0045145":null,"GO:0051539":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05280.1"],"transcripts_by_uniquename":{"SJAG_05280.1":null},"uniprot_identifier":"B6K184","uniquename":"SJAG_05280"}


id: SJAG_05282
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88469],"is_not":false,"summary":null,"term":"GO:0140861"}],"cellular_component":[{"annotations":[88467],"is_not":false,"summary":null,"term":"GO:0035267"},{"annotations":[88468],"is_not":false,"summary":null,"term":"GO:0000812"}],"molecular_function":[{"annotations":[88470],"is_not":false,"summary":null,"term":"GO:0005198"}]},"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"lsh1","uniquename":"SJAG_02875"},{"name":"hem14","uniquename":"SJAG_02876"},{"name":"yam8","uniquename":"SJAG_02877"},{"name":"shk2","uniquename":"SJAG_02878"},{"name":"fal1","uniquename":"SJAG_02879"},{"name":"tra2","uniquename":"SJAG_05282"},{"name":"trk2","uniquename":"SJAG_02883"},{"name":"elo1","uniquename":"SJAG_02885"},{"name":"mod21","uniquename":"SJAG_02886"},{"name":"ndk1","uniquename":"SJAG_02887"},{"uniquename":"SJAG_02888"}],"genes_by_uniquename":{"HGNC:12347":null,"SJAG_05282":null,"SPAC1F5.11c":null,"YHR099W":null},"has_protein_features":false,"location":{"chromosome_name":"supercont5.1","end_pos":1673534,"start_pos":1662946,"strand":"reverse"},"name":"tra2","ortholog_annotations":[{"gene_uniquename":"SJAG_05282","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12347","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05282","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1F5.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05282","ortholog_taxonid":4932,"ortholog_uniquename":"YHR099W","reference_uniquename":"PMID:29761456"}],"product":"NuA4 complex phosphatidylinositol pseudokinase complex subunit Tra2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006325","GO:0005694","GO:0005654","GO:0005198","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000812":null,"GO:0005198":null,"GO:0035267":null,"GO:0140861":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05282.1"],"transcripts_by_uniquename":{"SJAG_05282.1":null},"uniquename":"SJAG_05282"}


id: SJAG_05283
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92480],"is_not":false,"summary":null,"term":"GO:0006782"},{"annotations":[92481],"is_not":false,"summary":null,"term":"GO:0006780"}],"cellular_component":[{"annotations":[92478],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92479],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[92482],"is_not":false,"summary":null,"term":"GO:0004852"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB07815","InterPro:IPR039793","InterPro:IPR036108","EnsemblGenomes-Gn:SJAG_05283","GOA:B6K1J4","InterPro:IPR003754","UniProtKB/TrEMBL:B6K1J4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hsp20","uniquename":"SJAG_02919"},{"name":"naa15","uniquename":"SJAG_02920"},{"name":"pac2","uniquename":"SJAG_02921"},{"name":"eta2","uniquename":"SJAG_02922"},{"name":"spk1","uniquename":"SJAG_02923"},{"name":"hem4","uniquename":"SJAG_05283"},{"name":"dni1","uniquename":"SJAG_02924"},{"uniquename":"SJAG_02925"},{"name":"cct7","uniquename":"SJAG_02926"},{"name":"spt7","uniquename":"SJAG_02927"},{"uniquename":"SJAG_02928"}],"genes_by_uniquename":{"HGNC:12592":null,"SJAG_05283":null,"SPAC31G5.08":null,"YOR278W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.10090","interpro_id":"IPR036108","interpro_name":"Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":242,"score":0.0,"start":13},{"end":173,"score":0.0,"start":34}],"model":"1jr2A01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02602","interpro_id":"IPR003754","interpro_name":"Tetrapyrrole biosynthesis, uroporphyrinogen III synthase","interpro_type":"Domain","locations":[{"end":242,"score":3.0000001202542024e-26,"start":16}],"model":"PF02602","name":"Uroporphyrinogen-III synthase HemD"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12390","interpro_id":"IPR039793","interpro_name":"Uroporphyrinogen-III synthase","interpro_type":"Family","locations":[{"end":252,"score":0.0,"start":2}],"model":"PTHR12390:SF0","name":"UROPORPHYRINOGEN III SYNTHASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF69618","interpro_id":"IPR036108","interpro_name":"Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":245,"score":1.4400023279094685e-40,"start":1}],"model":"0039709","name":"HemD-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd06578","interpro_id":"IPR003754","interpro_name":"Tetrapyrrole biosynthesis, uroporphyrinogen III synthase","interpro_type":"Domain","locations":[{"end":245,"score":9.366920306042667e-34,"start":4}],"model":"cd06578","name":""}],"location":{"chromosome_name":"supercont5.1","end_pos":1764223,"start_pos":1763453,"strand":"reverse"},"name":"hem4","ortholog_annotations":[{"gene_uniquename":"SJAG_05283","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12592","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05283","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC31G5.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05283","ortholog_taxonid":4932,"ortholog_uniquename":"YOR278W","reference_uniquename":"PMID:29761456"}],"product":"uroporphyrinogen-III synthase Ups","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0033013","GO:0016829","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004852":null,"GO:0005634":null,"GO:0005829":null,"GO:0006780":null,"GO:0006782":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05283.1"],"transcripts_by_uniquename":{"SJAG_05283.1":null},"uniprot_identifier":"B6K1J4","uniquename":"SJAG_05283"}


id: SJAG_05285
data:
  {"cv_annotations":{"biological_process":[{"annotations":[111909],"is_not":false,"summary":null,"term":"GO:0071970"},{"annotations":[111910],"is_not":false,"summary":null,"term":"GO:1990344"}],"cellular_component":[{"annotations":[111894],"is_not":false,"summary":null,"term":"GO:0000148"},{"annotations":[111895],"is_not":false,"summary":null,"term":"GO:1902716"},{"annotations":[111896],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[111897],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[111898],"is_not":false,"summary":null,"term":"GO:0032154"},{"annotations":[111899],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[111900],"is_not":false,"summary":null,"term":"GO:0000935"},{"annotations":[111901],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[111902],"is_not":false,"summary":null,"term":"GO:0043332"},{"annotations":[111903],"is_not":false,"summary":null,"term":"GO:0110085"},{"annotations":[111904],"is_not":false,"summary":null,"term":"GO:0035841"},{"annotations":[111905],"is_not":false,"summary":null,"term":"GO:0031520"},{"annotations":[111906],"is_not":false,"summary":null,"term":"GO:0000936"},{"annotations":[111907],"is_not":false,"summary":null,"term":"GO:0030427"},{"annotations":[111908],"is_not":false,"summary":null,"term":"GO:0031160"}],"molecular_function":[{"annotations":[111911],"is_not":false,"summary":null,"term":"GO:0003843"},{"annotations":[111912],"is_not":false,"summary":null,"term":"GO:0140752"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB07877","InterPro:IPR003440","GOA:B6K320","EnsemblGenomes-Gn:SJAG_05285","InterPro:IPR026899","UniProtKB/TrEMBL:B6K320"],"deletion_viability":"unknown","disordered_region_coords":[[107,177],[183,191],[298,299],[305,318],[320,321],[939,943],[1069,1070],[1078,1080],[1109,1110],[1160,1176],[1,96]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nbp35","uniquename":"SJAG_02994"},{"name":"moe1","uniquename":"SJAG_02995"},{"name":"gmh5","uniquename":"SJAG_02996"},{"name":"pex6","uniquename":"SJAG_02997"},{"name":"sal3","uniquename":"SJAG_02998"},{"name":"bgs4","uniquename":"SJAG_05285"},{"name":"mog1","uniquename":"SJAG_03002"},{"name":"rbd2","uniquename":"SJAG_05286"},{"name":"pep3","uniquename":"SJAG_03005"},{"name":"brl1","uniquename":"SJAG_03006"},{"name":"bdp1","uniquename":"SJAG_03007"}],"genes_by_uniquename":{"SJAG_05285":null,"SPCC1840.02c":null,"YGR032W":null,"YLR342W":null,"YMR306W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02364","interpro_id":"IPR003440","interpro_name":"Glycosyl transferase, family 48","interpro_type":"Family","locations":[{"end":1677,"score":0.0,"start":843}],"model":"PF02364","name":"1,3-beta-glucan synthase component"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF14288","interpro_id":"IPR026899","interpro_name":"1,3-beta-glucan synthase component FKS1-like, domain-1","interpro_type":"Domain","locations":[{"end":461,"score":1.9999999774532045e-26,"start":355}],"model":"PF14288","name":"1,3-beta-glucan synthase subunit FKS1, domain-1"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12741","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1826,"score":0.0,"start":844}],"model":"PTHR12741:SF107","name":"LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01205","interpro_id":"IPR026899","interpro_name":"1,3-beta-glucan synthase component FKS1-like, domain-1","interpro_type":"Domain","locations":[{"end":465,"score":0.0,"start":353}],"model":"SM01205","name":"1,3-beta-glucan synthase subunit FKS1"}],"location":{"chromosome_name":"supercont5.2","end_pos":228972,"start_pos":223182,"strand":"forward"},"low_complexity_region_coords":[[97,106],[294,318],[322,334],[563,566],[1069,1079],[1338,1350],[1646,1658],[1687,1704],[1793,1805],[1852,1862]],"name":"bgs4","ortholog_annotations":[{"gene_uniquename":"SJAG_05285","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1840.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05285","ortholog_taxonid":4932,"ortholog_uniquename":"YGR032W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05285","ortholog_taxonid":4932,"ortholog_uniquename":"YLR342W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05285","ortholog_taxonid":4932,"ortholog_uniquename":"YMR306W","reference_uniquename":"PMID:29761456"}],"product":"cell wall and secondary septum 1,6 branched 1,3-beta-glucan synthase catalytic subunit Bgs4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005618","GO:0071554","GO:0016757","GO:0015629","GO:0005886","GO:0005794","GO:0000935","GO:0005938","GO:0070938","GO:0000281","GO:0005975"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000148":null,"GO:0000935":null,"GO:0000936":null,"GO:0003843":null,"GO:0005737":null,"GO:0005794":null,"GO:0030427":null,"GO:0031160":null,"GO:0031520":null,"GO:0032153":null,"GO:0032154":null,"GO:0035841":null,"GO:0043332":null,"GO:0051286":null,"GO:0071970":null,"GO:0110085":null,"GO:0140752":null,"GO:1902716":null,"GO:1990344":null},"tm_domain_coords":[[567,589],[596,618],[658,680],[713,735],[1335,1357],[1392,1414],[1474,1496],[1501,1523],[1594,1616],[1649,1671],[1686,1708],[1720,1742],[1791,1810],[1847,1869]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05285.1"],"transcripts_by_uniquename":{"SJAG_05285.1":null},"uniprot_identifier":"B6K320","uniquename":"SJAG_05285"}


id: SJAG_05286
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114509],"is_not":false,"summary":null,"term":"GO:0032933"}],"cellular_component":[{"annotations":[114507],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[114508],"is_not":false,"summary":null,"term":"GO:0000139"}],"molecular_function":[{"annotations":[114510],"is_not":false,"summary":null,"term":"GO:0030674"},{"annotations":[114511],"is_not":false,"summary":null,"term":"GO:0004252"}]},"dbxrefs":["InterPro:IPR022764","GOA:B6K322","EnsemblGenomes-Tr:EEB07879","InterPro:IPR035952","EnsemblGenomes-Gn:SJAG_05286","UniProtKB/TrEMBL:B6K322"],"deletion_viability":"unknown","disordered_region_coords":[[248,259]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gmh5","uniquename":"SJAG_02996"},{"name":"pex6","uniquename":"SJAG_02997"},{"name":"sal3","uniquename":"SJAG_02998"},{"name":"bgs4","uniquename":"SJAG_05285"},{"name":"mog1","uniquename":"SJAG_03002"},{"name":"rbd2","uniquename":"SJAG_05286"},{"name":"pep3","uniquename":"SJAG_03005"},{"name":"brl1","uniquename":"SJAG_03006"},{"name":"bdp1","uniquename":"SJAG_03007"},{"name":"bmt5","uniquename":"SJAG_03008"},{"name":"erm2","uniquename":"SJAG_03009"}],"genes_by_uniquename":{"SJAG_05286":null,"SPCC790.03":null,"YPL246C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1540.10","interpro_id":"IPR035952","interpro_name":"Rhomboid-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":201,"score":1.5000000170217692e-19,"start":11}],"model":"2nr9A00","name":"Rhomboid-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01694","interpro_id":"IPR022764","interpro_name":"Peptidase S54, rhomboid domain","interpro_type":"Domain","locations":[{"end":198,"score":7.199999771511762e-19,"start":51}],"model":"PF01694","name":"Rhomboid family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43066","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":207,"score":1.000000045813705e-18,"start":23}],"model":"PTHR43066:SF1","name":"RHOMBOID-RELATED PROTEIN"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF144091","interpro_id":"IPR035952","interpro_name":"Rhomboid-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":198,"score":1.5700000612484858e-22,"start":20}],"model":"0053209","name":"Rhomboid-like"}],"location":{"chromosome_name":"supercont5.2","end_pos":231796,"start_pos":230559,"strand":"reverse"},"low_complexity_region_coords":[[162,172]],"name":"rbd2","ortholog_annotations":[{"gene_uniquename":"SJAG_05286","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC790.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05286","ortholog_taxonid":4932,"ortholog_uniquename":"YPL246C","reference_uniquename":"PMID:29761456"}],"product":"Golgi rhomboid protease Rbd2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0060090","GO:0008233","GO:0023052","GO:0005794","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0004252":null,"GO:0005794":null,"GO:0030674":null,"GO:0032933":null},"tm_domain_coords":[[21,43],[58,80],[93,112],[122,144],[164,186]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05286.1"],"transcripts_by_uniquename":{"SJAG_05286.1":null},"uniprot_identifier":"B6K322","uniquename":"SJAG_05286"}


id: SJAG_05287
data:
  {"cv_annotations":{"biological_process":[{"annotations":[87873],"is_not":false,"summary":null,"term":"GO:0000256"},{"annotations":[87874],"is_not":false,"summary":null,"term":"GO:0006145"}],"cellular_component":[{"annotations":[87871],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[87872],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[87875],"is_not":false,"summary":null,"term":"GO:0004848"},{"annotations":[87876],"is_not":false,"summary":null,"term":"GO:0050385"}]},"dbxrefs":["InterPro:IPR011051","InterPro:IPR024060","UniProtKB/TrEMBL:B6K331","EnsemblGenomes-Tr:EEB07888","EnsemblGenomes-Gn:SJAG_05287","GOA:B6K331","InterPro:IPR007247"],"deletion_viability":"unknown","disordered_region_coords":[[93,98],[111,112],[174,181],[187,189],[195,197],[185,184]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bmt5","uniquename":"SJAG_03008"},{"name":"erm2","uniquename":"SJAG_03009"},{"name":"mug137","uniquename":"SJAG_03010"},{"name":"myo52","uniquename":"SJAG_03011"},{"name":"tif6","uniquename":"SJAG_03012"},{"name":"dal1","uniquename":"SJAG_05287"},{"name":"cda1","uniquename":"SJAG_03013"},{"name":"rpo41","uniquename":"SJAG_03014"},{"name":"kei1","uniquename":"SJAG_03015"},{"name":"bmt2","uniquename":"SJAG_03016"},{"name":"mug58","uniquename":"SJAG_03017"}],"genes_by_uniquename":{"SJAG_05287":null,"SPAC19G12.04":null,"YIR032C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.120.480","interpro_id":"IPR024060","interpro_name":"Ureidoglycolate lyase domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":193,"score":4.484155085839415e-44,"start":2}],"model":"2bdrA00","name":"Ureidoglycolate hydrolase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04115","interpro_id":"IPR007247","interpro_name":"Ureidoglycolate lyase","interpro_type":"Family","locations":[{"end":181,"score":3.4000000325099397e-35,"start":3}],"model":"PF04115","name":"Ureidoglycolate lyase"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF017306","interpro_id":"IPR007247","interpro_name":"Ureidoglycolate lyase","interpro_type":"Family","locations":[{"end":182,"score":7.400000111546748e-17,"start":1}],"model":"PIRSF017306","name":"Ureidoglycolate hydrolase"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR21221","interpro_id":"IPR007247","interpro_name":"Ureidoglycolate lyase","interpro_type":"Family","locations":[{"end":192,"score":0.0,"start":3}],"model":"PTHR21221:SF1","name":"UREIDOGLYCOLATE HYDROLASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF51182","interpro_id":"IPR011051","interpro_name":"RmlC-like cupin domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":183,"score":5.780000232738994e-31,"start":1}],"model":"0051957","name":"RmlC-like cupins"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd20298","interpro_id":"IPR047233","interpro_name":"Ureidoglycolate amidohydrolase, cupin domain","interpro_type":"Domain","locations":[{"end":156,"score":5.182289962562091e-36,"start":62}],"model":"cd20298","name":"ureidoglycolate amidohydrolase (UAH) and related proteins, cupin domain"}],"location":{"chromosome_name":"supercont5.2","end_pos":255732,"start_pos":255136,"strand":"reverse"},"low_complexity_region_coords":[[185,186]],"name":"dal1","ortholog_annotations":[{"gene_uniquename":"SJAG_05287","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19G12.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05287","ortholog_taxonid":4932,"ortholog_uniquename":"YIR032C","reference_uniquename":"PMID:29761456"}],"product":"ureidoglycolate hydrolase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016810","GO:0016829","GO:0055086","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000256":null,"GO:0004848":null,"GO:0005634":null,"GO:0005829":null,"GO:0006145":null,"GO:0050385":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05287.1"],"transcripts_by_uniquename":{"SJAG_05287.1":null},"uniprot_identifier":"B6K331","uniquename":"SJAG_05287"}


id: SJAG_05288
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105143],"is_not":false,"summary":null,"term":"GO:0051728"},{"annotations":[105144],"is_not":false,"summary":null,"term":"GO:0045944"},{"annotations":[105145],"is_not":false,"summary":null,"term":"GO:0110044"},{"annotations":[105146],"is_not":false,"summary":null,"term":"GO:0006357"}],"cellular_component":[{"annotations":[105141],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[105142],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[105147],"is_not":false,"summary":null,"term":"GO:0001228"},{"annotations":[105148],"is_not":false,"summary":null,"term":"GO:0003700"},{"annotations":[105149],"is_not":false,"summary":null,"term":"GO:0000978"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB07934","InterPro:IPR001766","EnsemblGenomes-Gn:SJAG_05288","GOA:B6K377","InterPro:IPR036388","UniProtKB/TrEMBL:B6K377","InterPro:IPR036390"],"deletion_viability":"unknown","disordered_region_coords":[[28,30],[32,36],[170,171],[201,296],[301,307],[314,314],[316,317],[319,321],[330,331],[339,342],[345,349],[354,355],[174,182]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cog8","uniquename":"SJAG_03054"},{"name":"his3","uniquename":"SJAG_03055"},{"name":"alg2","uniquename":"SJAG_03056"},{"name":"mok12","uniquename":"SJAG_03057"},{"uniquename":"SJAG_03058"},{"name":"mei4","uniquename":"SJAG_05288"},{"name":"cdk9","uniquename":"SJAG_03061"},{"name":"wdr8","uniquename":"SJAG_03062"},{"uniquename":"SJAG_03063"},{"name":"pdb1","uniquename":"SJAG_03064"},{"name":"rsm27","uniquename":"SJAG_03065"}],"genes_by_uniquename":{"SJAG_05288":null,"SPBC32H8.11":null,"YCR065W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.10.10","interpro_id":"IPR036388","interpro_name":"Winged helix-like DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":170,"score":1.2999999573964995e-33,"start":72}],"model":"2c6yB00","name":"Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00250","interpro_id":"IPR001766","interpro_name":"Fork head domain","interpro_type":"Domain","locations":[{"end":161,"score":8.299999725393384e-30,"start":79}],"model":"PF00250","name":"Forkhead domain"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00053","interpro_id":"IPR001766","interpro_name":"Fork head domain","interpro_type":"Domain","locations":[{"end":92,"score":2.20000002915631e-14,"start":79},{"end":117,"score":2.20000002915631e-14,"start":100},{"end":140,"score":2.20000002915631e-14,"start":123}],"model":"PR00053","name":""},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50039","interpro_id":"IPR001766","interpro_name":"Fork head domain","interpro_type":"Domain","locations":[{"end":164,"score":0.0,"start":79}],"model":"PS50039","name":"Fork head domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR45881","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":344,"score":8.300002908073037e-40,"start":75}],"model":"PTHR45881:SF1","name":"CHECKPOINT SUPPRESSOR 1-LIKE, ISOFORM A-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00339","interpro_id":"IPR001766","interpro_name":"Fork head domain","interpro_type":"Domain","locations":[{"end":167,"score":1.7000006462787594e-39,"start":77}],"model":"SM00339","name":"FORKHEAD"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF46785","interpro_id":"IPR036390","interpro_name":"Winged helix DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":168,"score":1.770000031003484e-32,"start":78}],"model":"0039808","name":"\"Winged helix\" DNA-binding domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00059","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":154,"score":8.346360663869831e-39,"start":80}],"model":"cd00059","name":"Forkhead (FH) domain found in Forkhead box (FOX) family of transcription factors and similar proteins"}],"location":{"chromosome_name":"supercont5.2","end_pos":349144,"start_pos":347267,"strand":"reverse"},"low_complexity_region_coords":[[183,200],[298,313]],"name":"mei4","ortholog_annotations":[{"gene_uniquename":"SJAG_05288","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC32H8.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05288","ortholog_taxonid":4932,"ortholog_uniquename":"YCR065W","reference_uniquename":"PMID:29761456"}],"product":"DNA-binding forkhead transcription factor, meiotic Mei4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006355","GO:0005634","GO:0005694","GO:0006351","GO:0003700"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0000978":null,"GO:0001228":null,"GO:0003700":null,"GO:0005634":null,"GO:0006357":null,"GO:0045944":null,"GO:0051728":null,"GO:0110044":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05288.1"],"transcripts_by_uniquename":{"SJAG_05288.1":null},"uniprot_identifier":"B6K377","uniquename":"SJAG_05288"}


id: SJAG_05289
data:
  {"cv_annotations":{"biological_process":[{"annotations":[104654],"is_not":false,"summary":null,"term":"GO:0006914"},{"annotations":[104655],"is_not":false,"summary":null,"term":"GO:0090158"},{"annotations":[104656],"is_not":false,"summary":null,"term":"GO:1990809"},{"annotations":[104657],"is_not":false,"summary":null,"term":"GO:0016236"},{"annotations":[104658],"is_not":false,"summary":null,"term":"GO:0044804"},{"annotations":[104659],"is_not":false,"summary":null,"term":"GO:2000786"},{"annotations":[104660],"is_not":false,"summary":null,"term":"GO:0061709"}],"cellular_component":[{"annotations":[104651],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[104652],"is_not":false,"summary":null,"term":"GO:0061908"},{"annotations":[104653],"is_not":false,"summary":null,"term":"GO:0012506"}],"molecular_function":[{"annotations":[104661],"is_not":false,"summary":null,"term":"GO:0180020"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB07942","GOA:B6K385","InterPro:IPR004345","UniProtKB/TrEMBL:B6K385","EnsemblGenomes-Gn:SJAG_05289"],"deletion_viability":"unknown","disordered_region_coords":[[165,170]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03063"},{"name":"pdb1","uniquename":"SJAG_03064"},{"name":"rsm27","uniquename":"SJAG_03065"},{"name":"gpi1","uniquename":"SJAG_03066"},{"name":"tor1","uniquename":"SJAG_03067"},{"name":"hva22","uniquename":"SJAG_05289"},{"name":"mgm101","uniquename":"SJAG_03068"},{"name":"bpl1","uniquename":"SJAG_03069"},{"name":"lsm4","uniquename":"SJAG_03070"},{"name":"mse1","uniquename":"SJAG_03071"},{"name":"ypt71","uniquename":"SJAG_03072"}],"genes_by_uniquename":{"HGNC:17975":null,"HGNC:23711":null,"HGNC:25786":null,"HGNC:26176":null,"SJAG_05289":null,"SPBC30D10.09c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03134","interpro_id":"IPR004345","interpro_name":"TB2/DP1/HVA22-related protein","interpro_type":"Family","locations":[{"end":115,"score":8.299999749528534e-17,"start":46}],"model":"PF03134","name":"TB2/DP1, HVA22 family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12300","interpro_id":"IPR004345","interpro_name":"TB2/DP1/HVA22-related protein","interpro_type":"Family","locations":[{"end":125,"score":3.79999990525838e-18,"start":15}],"model":"PTHR12300:SF161","name":"HVA22-LIKE PROTEINS"}],"location":{"chromosome_name":"supercont5.2","end_pos":369644,"start_pos":368996,"strand":"forward"},"name":"hva22","ortholog_annotations":[{"gene_uniquename":"SJAG_05289","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17975","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05289","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23711","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05289","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25786","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05289","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26176","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05289","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC30D10.09c","reference_uniquename":"PMID:21511999"}],"product":"ER membrane organization protein, HVA22/TB2/DP1 family protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0061024","GO:0006914","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0006914":null,"GO:0012506":null,"GO:0016236":null,"GO:0044804":null,"GO:0061709":null,"GO:0061908":null,"GO:0090158":null,"GO:0180020":null,"GO:1990809":null,"GO:2000786":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05289.1"],"transcripts_by_uniquename":{"SJAG_05289.1":null},"uniprot_identifier":"B6K385","uniquename":"SJAG_05289"}


id: SJAG_05290
data:
  {"cv_annotations":{"biological_process":[{"annotations":[101259],"is_not":false,"summary":null,"term":"GO:0035556"},{"annotations":[101260],"is_not":false,"summary":null,"term":"GO:1902425"},{"annotations":[101261],"is_not":false,"summary":null,"term":"GO:0140281"},{"annotations":[101262],"is_not":false,"summary":null,"term":"GO:0090520"}],"cellular_component":[{"annotations":[101253],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[101254],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[101255],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[101256],"is_not":false,"summary":null,"term":"GO:0071341"},{"annotations":[101257],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[101258],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[101263],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[101264],"is_not":false,"summary":null,"term":"GO:0004674"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05290","InterPro:IPR011009","InterPro:IPR039046","InterPro:IPR017441","InterPro:IPR011993","GOA:B6K3A0","InterPro:IPR000719","EnsemblGenomes-Tr:EEB07957","UniProtKB/TrEMBL:B6K3A0"],"deletion_viability":"unknown","disordered_region_coords":[[1,31],[50,51],[53,60],[62,66],[393,394],[397,400],[404,404]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03078"},{"uniquename":"SJAG_03079"},{"name":"llp1","uniquename":"SJAG_03080"},{"name":"git5","uniquename":"SJAG_03081"},{"name":"omh5","uniquename":"SJAG_03082"},{"name":"pdk1","uniquename":"SJAG_05290"},{"uniquename":"SJAG_03085"},{"name":"arc3","uniquename":"SJAG_03086"},{"uniquename":"SJAG_03087"},{"name":"fim1","uniquename":"SJAG_03088"},{"name":"lam2","uniquename":"SJAG_03089"}],"genes_by_uniquename":{"HGNC:8816":null,"SJAG_05290":null,"SPBC1778.10c":null,"YDR466W":null,"YDR490C":null,"YOL100W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.510.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":339,"score":5.300000092038346e-30,"start":163}],"model":"4c0tA02","name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.29.30","interpro_id":"IPR011993","interpro_name":"PH-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":558,"score":6.600000119760807e-7,"start":401}],"model":"1w1hD00","name":"Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.200.20","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":162,"score":1.4000000044395076e-29,"start":72}],"model":"4c0tA01","name":"Phosphorylase Kinase; domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00069","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":326,"score":4.499999847835228e-37,"start":80}],"model":"PF00069","name":"Protein kinase domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00107","interpro_id":"IPR017441","interpro_name":"Protein kinase, ATP binding site","interpro_type":"Binding_site","locations":[{"end":107,"score":0.0,"start":84}],"model":"PS00107","name":"Protein kinases ATP-binding region signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50011","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":326,"score":0.0,"start":78}],"model":"PS50011","name":"Protein kinase domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR24356","interpro_id":"IPR050236","interpro_name":"Serine/threonine-protein kinases, AGC","interpro_type":"Family","locations":[{"end":357,"score":0.0,"start":74}],"model":"PTHR24356:SF411","name":"SERINE/THREONINE-PROTEIN KINASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56112","interpro_id":"IPR011009","interpro_name":"Protein kinase-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":411,"score":0.0,"start":75}],"model":"0041927","name":"Protein kinase-like (PK-like)"}],"location":{"chromosome_name":"supercont5.2","end_pos":404311,"start_pos":402324,"strand":"forward"},"low_complexity_region_coords":[[290,299],[371,384],[405,420]],"name":"pdk1","ortholog_annotations":[{"gene_uniquename":"SJAG_05290","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8816","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05290","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1778.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05290","ortholog_taxonid":4932,"ortholog_uniquename":"YDR466W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_05290","ortholog_taxonid":4932,"ortholog_uniquename":"YDR490C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05290","ortholog_taxonid":4932,"ortholog_uniquename":"YOL100W","reference_uniquename":"PMID:29761456"}],"product":"serine/threonine protein kinase Ppk21/Pdk1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005938","GO:0000070","GO:0016301","GO:0004672","GO:0000281","GO:0005634","GO:0005816","GO:0140096","GO:0005829","GO:0023052","GO:0015630"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004674":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0032153":null,"GO:0035556":null,"GO:0044732":null,"GO:0051286":null,"GO:0071341":null,"GO:0090520":null,"GO:0140281":null,"GO:1902425":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05290.1"],"transcripts_by_uniquename":{"SJAG_05290.1":null},"uniprot_identifier":"B6K3A0","uniquename":"SJAG_05290"}


id: SJAG_05291
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[100477],"is_not":false,"summary":null,"term":"GO:0005783"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3I4","EnsemblGenomes-Gn:SJAG_05291","GOA:B6K3I4","EnsemblGenomes-Tr:EEB08041"],"deletion_viability":"unknown","disordered_region_coords":[[29,40],[91,92],[109,131],[222,229]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ura4","uniquename":"SJAG_03164"},{"name":"new25","uniquename":"SJAG_06097"},{"name":"pmp20","uniquename":"SJAG_03166"},{"name":"trp4","uniquename":"SJAG_03167"},{"uniquename":"SJAG_03168"},{"uniquename":"SJAG_05291"},{"name":"scs2","uniquename":"SJAG_03170"},{"uniquename":"SJAG_03171"},{"name":"csr103","uniquename":"SJAG_03172"},{"name":"cox10","uniquename":"SJAG_03173"},{"name":"rbk1","uniquename":"SJAG_03174"}],"genes_by_uniquename":{"SJAG_05291":null,"SPBC16G5.06":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51257","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":17,"score":0.0,"start":1}],"model":"PS51257","name":"Prokaryotic membrane lipoprotein lipid attachment site profile"}],"location":{"chromosome_name":"supercont5.2","end_pos":569480,"start_pos":568743,"strand":"reverse"},"low_complexity_region_coords":[[24,40],[56,68],[69,90],[91,108],[177,179]],"ortholog_annotations":[{"gene_uniquename":"SJAG_05291","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16G5.06","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null},"tm_domain_coords":[[5,23],[180,202]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05291.1"],"transcripts_by_uniquename":{"SJAG_05291.1":null},"uniprot_identifier":"B6K3I4","uniquename":"SJAG_05291"}


id: SJAG_05292
data:
  {"cv_annotations":{},"dbxrefs":["GOA:B6K3K5","UniProtKB/TrEMBL:B6K3K5","EnsemblGenomes-Gn:SJAG_05292","EnsemblGenomes-Tr:EEB08062"],"deletion_viability":"unknown","disordered_region_coords":[[4,5],[8,15],[17,20],[50,60],[99,108],[124,125],[135,136],[139,141],[143,144],[146,176],[178,183],[186,189],[220,223],[287,299],[77,76],[255,274]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mpg1","uniquename":"SJAG_03188"},{"name":"rqt3","uniquename":"SJAG_03189"},{"uniquename":"SJAG_03191"},{"name":"mrpl22","uniquename":"SJAG_03192"},{"name":"hrr1","uniquename":"SJAG_03193"},{"uniquename":"SJAG_05292"},{"uniquename":"SJAG_03196"},{"name":"rpl23a","uniquename":"SJAG_03197"},{"name":"oar2","uniquename":"SJAG_03198"},{"name":"cyt2","uniquename":"SJAG_03199"},{"name":"cut11","uniquename":"SJAG_03200"}],"genes_by_uniquename":{"SJAG_05292":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.2","end_pos":613487,"start_pos":611937,"strand":"reverse"},"low_complexity_region_coords":[[77,98],[190,206],[275,286]],"product":"candidate Dms1 ortholog, syntenic position (possible gene prediction error)","taxonid":4897,"taxonomic_distribution":"other","tm_domain_coords":[[341,363]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05292.1"],"transcripts_by_uniquename":{"SJAG_05292.1":null},"uniprot_identifier":"B6K3K5","uniquename":"SJAG_05292"}


id: SJAG_05294
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100014],"is_not":false,"summary":null,"term":"GO:1902600"},{"annotations":[100015],"is_not":false,"summary":null,"term":"GO:0007035"}],"cellular_component":[{"annotations":[100012],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[100013],"is_not":false,"summary":null,"term":"GO:0000220"}],"molecular_function":[{"annotations":[100016],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[100017],"is_not":false,"summary":null,"term":"GO:0046961"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3R9","InterPro:IPR008389","EnsemblGenomes-Gn:SJAG_05294","GOA:B6K3R9","EnsemblGenomes-Tr:EEB08126"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cti6","uniquename":"SJAG_03255"},{"name":"avt5","uniquename":"SJAG_03256"},{"name":"cid11","uniquename":"SJAG_03257"},{"name":"htr11","uniquename":"SJAG_03258"},{"uniquename":"SJAG_03259"},{"name":"vma9","uniquename":"SJAG_05294"},{"name":"sec11","uniquename":"SJAG_03261"},{"name":"rps12","uniquename":"SJAG_03262"},{"name":"pmp1","uniquename":"SJAG_03263"},{"name":"mto2","uniquename":"SJAG_03264"},{"name":"lmb1","uniquename":"SJAG_03265"}],"genes_by_uniquename":{"HGNC:21723":null,"HGNC:863":null,"SJAG_05294":null,"SPBC1685.16":null,"YCL005W-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05493","interpro_id":"IPR008389","interpro_name":"ATPase, V0 complex, subunit e1/e2","interpro_type":"Family","locations":[{"end":63,"score":7.200000081704492e-18,"start":5}],"model":"PF05493","name":"ATP synthase subunit H"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12263","interpro_id":"IPR008389","interpro_name":"ATPase, V0 complex, subunit e1/e2","interpro_type":"Family","locations":[{"end":62,"score":8.699999813448211e-13,"start":2}],"model":"PTHR12263:SF0","name":"VACUOLAR ATP SYNTHASE SUBUNIT H"}],"location":{"chromosome_name":"supercont5.2","end_pos":741005,"start_pos":740802,"strand":"reverse"},"low_complexity_region_coords":[[11,24]],"name":"vma9","ortholog_annotations":[{"gene_uniquename":"SJAG_05294","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21723","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05294","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:863","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05294","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1685.16","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05294","ortholog_taxonid":4932,"ortholog_uniquename":"YCL005W-A","reference_uniquename":"PMID:29761456"}],"product":"V-type ATPase V0 subunit e","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0022857","GO:0055085","GO:0005773","GO:0016887"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000220":null,"GO:0000329":null,"GO:0007035":null,"GO:0016887":null,"GO:0046961":null,"GO:1902600":null},"tm_domain_coords":[[5,24],[37,59]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05294.1"],"transcripts_by_uniquename":{"SJAG_05294.1":null},"uniprot_identifier":"B6K3R9","uniquename":"SJAG_05294"}


id: SJAG_05295
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86403],"is_not":false,"summary":null,"term":"GO:0031619"},{"annotations":[86404],"is_not":false,"summary":null,"term":"GO:0042138"},{"annotations":[86405],"is_not":false,"summary":null,"term":"GO:0000706"},{"annotations":[86406],"is_not":false,"summary":null,"term":"GO:0007131"}],"cellular_component":[{"annotations":[86400],"is_not":false,"summary":null,"term":"GO:0000228"},{"annotations":[86401],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[86402],"is_not":false,"summary":null,"term":"GO:0035861"}],"molecular_function":[{"annotations":[86407],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[86408],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[86409],"is_not":false,"summary":null,"term":"GO:0045027"},{"annotations":[86410],"is_not":false,"summary":null,"term":"GO:0003918"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3T2","EnsemblGenomes-Tr:EEB08139","EnsemblGenomes-Gn:SJAG_05295","InterPro:IPR013049","GOA:B6K3T2","InterPro:IPR034136","InterPro:IPR036388","InterPro:IPR002815","InterPro:IPR036078"],"deletion_viability":"unknown","disordered_region_coords":[[8,9]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03268"},{"uniquename":"SJAG_03269"},{"name":"erp2","uniquename":"SJAG_03270"},{"name":"glc8","uniquename":"SJAG_03272"},{"name":"hua1","uniquename":"SJAG_03273"},{"name":"rec12","uniquename":"SJAG_05295"},{"name":"ucp7","uniquename":"SJAG_05296"},{"name":"fol2","uniquename":"SJAG_03275"},{"name":"exo2","uniquename":"SJAG_03276"},{"name":"gus1","uniquename":"SJAG_03277"},{"name":"ftp105","uniquename":"SJAG_03278"}],"genes_by_uniquename":{"HGNC:11250":null,"SJAG_05295":null,"SPAC17A5.11":null,"YHL022C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.10.10","interpro_id":"IPR036388","interpro_name":"Winged helix-like DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":138,"score":1.499999973677505e-14,"start":54}],"model":"2q2eA01","name":"Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.1360.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":346,"score":0.0,"start":140}],"model":"2zbkA02","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04406","interpro_id":"IPR013049","interpro_name":"Spo11/DNA topoisomerase VI, subunit A, N-terminal","interpro_type":"Domain","locations":[{"end":136,"score":9.899999988266585e-17,"start":75}],"model":"PF04406","name":"Type IIB DNA topoisomerase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF21180","interpro_id":"IPR034136","interpro_name":"Topoisomerase 6 subunit A/Spo11, TOPRIM domain","interpro_type":"Domain","locations":[{"end":333,"score":5.90000013588401e-20,"start":183}],"model":"PF21180","name":"Topoisomerase 6 subunit A/Spo11, Toprim domain"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR01550","interpro_id":"IPR002815","interpro_name":"Spo11/DNA topoisomerase VI subunit A","interpro_type":"Family","locations":[{"end":110,"score":2.700000027369817e-31,"start":99},{"end":130,"score":2.700000027369817e-31,"start":113},{"end":146,"score":2.700000027369817e-31,"start":131},{"end":199,"score":2.700000027369817e-31,"start":182},{"end":225,"score":2.700000027369817e-31,"start":204},{"end":253,"score":2.700000027369817e-31,"start":237}],"model":"PR01550","name":""},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10848","interpro_id":"IPR002815","interpro_name":"Spo11/DNA topoisomerase VI subunit A","interpro_type":"Family","locations":[{"end":343,"score":0.0,"start":57}],"model":"PTHR10848:SF0","name":"MEIOTIC RECOMBINATION PROTEIN SPO11"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56726","interpro_id":"IPR036078","interpro_name":"Spo11/DNA topoisomerase VI subunit A superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":343,"score":0.0,"start":73}],"model":"0036260","name":"DNA topoisomerase IV, alpha subunit"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00223","interpro_id":"IPR034136","interpro_name":"Topoisomerase 6 subunit A/Spo11, TOPRIM domain","interpro_type":"Domain","locations":[{"end":328,"score":1.2611686178923354e-44,"start":182}],"model":"cd00223","name":""}],"location":{"chromosome_name":"supercont5.2","end_pos":763807,"start_pos":762595,"strand":"forward"},"name":"rec12","ortholog_annotations":[{"gene_uniquename":"SJAG_05295","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11250","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05295","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17A5.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05295","ortholog_taxonid":4932,"ortholog_uniquename":"YHL022C","reference_uniquename":"PMID:29761456"}],"product":"DNA topoisomerase type II (DSB-forming) Rec12/Spo11","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006281","GO:0140013","GO:0016887","GO:0005634","GO:0005694","GO:0006310","GO:0016853","GO:0140097"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000228":null,"GO:0000706":null,"GO:0003918":null,"GO:0005524":null,"GO:0005634":null,"GO:0007131":null,"GO:0016887":null,"GO:0031619":null,"GO:0035861":null,"GO:0042138":null,"GO:0045027":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05295.1"],"transcripts_by_uniquename":{"SJAG_05295.1":null},"uniprot_identifier":"B6K3T2","uniquename":"SJAG_05295"}


id: SJAG_05296
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86414],"is_not":false,"summary":null,"term":"GO:0072318"},{"annotations":[86415],"is_not":false,"summary":null,"term":"GO:0072583"}],"cellular_component":[{"annotations":[86411],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[86412],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[86413],"is_not":false,"summary":null,"term":"GO:0031982"}],"molecular_function":[{"annotations":[78494],"is_not":false,"summary":null,"term":"GO:0030276"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K3T3","InterPro:IPR036869","InterPro:IPR011990","InterPro:IPR015940","InterPro:IPR013026","EnsemblGenomes-Tr:EEB08140","InterPro:IPR001623","InterPro:IPR009060","InterPro:IPR019734","EnsemblGenomes-Gn:SJAG_05296"],"deletion_viability":"unknown","disordered_region_coords":[[45,55],[96,97],[99,130],[137,139],[189,188],[225,253],[256,261],[263,266],[321,329],[332,337],[349,382],[435,438],[442,447],[499,500],[543,544],[547,562],[565,566],[4,23],[63,73],[87,86],[141,171],[275,300],[507,522]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03269"},{"name":"erp2","uniquename":"SJAG_03270"},{"name":"glc8","uniquename":"SJAG_03272"},{"name":"hua1","uniquename":"SJAG_03273"},{"name":"rec12","uniquename":"SJAG_05295"},{"name":"ucp7","uniquename":"SJAG_05296"},{"name":"fol2","uniquename":"SJAG_03275"},{"name":"exo2","uniquename":"SJAG_03276"},{"name":"gus1","uniquename":"SJAG_03277"},{"name":"ftp105","uniquename":"SJAG_03278"},{"name":"saf5","uniquename":"SJAG_03279"}],"genes_by_uniquename":{"SJAG_05296":null,"SPAC17A5.12":null,"YDR320C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.287.110","interpro_id":"IPR036869","interpro_name":"Chaperone J-domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":665,"score":3.1000001069271474e-39,"start":539}],"model":"1n4cA01","name":"DnaJ domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.8.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":233,"score":9.799999922677216e-9,"start":171}],"model":"3ihpA05","name":"DNA helicase RuvA subunit, C-terminal domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.40.10","interpro_id":"IPR011990","interpro_name":"Tetratricopeptide-like helical domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":508,"score":1.3999999814211257e-18,"start":370}],"model":"4i2zA01","name":"Tetratricopeptide repeat domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00627","interpro_id":"IPR015940","interpro_name":"Ubiquitin-associated domain","interpro_type":"Domain","locations":[{"end":224,"score":0.00570000009611249,"start":190}],"model":"PF00627","name":"UBA/TS-N domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50005","interpro_id":"IPR019734","interpro_name":"Tetratricopeptide repeat","interpro_type":"Repeat","locations":[{"end":406,"score":0.0,"start":373}],"model":"PS50005","name":"TPR repeat profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50076","interpro_id":"IPR001623","interpro_name":"DnaJ domain","interpro_type":"Domain","locations":[{"end":664,"score":0.0,"start":601}],"model":"PS50076","name":"dnaJ domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23172","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":659,"score":2.500000007927692e-30,"start":556}],"model":"PTHR23172:SF19","name":"AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF46565","interpro_id":"IPR036869","interpro_name":"Chaperone J-domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":661,"score":2.749999973455631e-32,"start":483}],"model":"0048279","name":"Chaperone J-domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF46934","interpro_id":"IPR009060","interpro_name":"UBA-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":227,"score":6.810000030554875e-8,"start":170}],"model":"0050161","name":"UBA-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48452","interpro_id":"IPR011990","interpro_name":"Tetratricopeptide-like helical domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":514,"score":6.750000262713599e-17,"start":369}],"model":"0040251","name":"TPR-like"}],"location":{"chromosome_name":"supercont5.2","end_pos":766061,"start_pos":764005,"strand":"forward"},"low_complexity_region_coords":[[24,44],[74,86],[87,95],[172,188],[301,320],[330,348],[523,542]],"name":"ucp7","ortholog_annotations":[{"gene_uniquename":"SJAG_05296","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17A5.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05296","ortholog_taxonid":4932,"ortholog_uniquename":"YDR320C","reference_uniquename":"PMID:29761456"}],"product":"UBA/TPR/DNAJ domain protein Ucp7","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005794","GO:0005789","GO:0016192","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005789":null,"GO:0005794":null,"GO:0030276":null,"GO:0031982":null,"GO:0072318":null,"GO:0072583":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05296.1"],"transcripts_by_uniquename":{"SJAG_05296.1":null},"uniprot_identifier":"B6K3T3","uniquename":"SJAG_05296"}


id: SJAG_05297
data:
  {"cv_annotations":{"biological_process":[{"annotations":[85366],"is_not":false,"summary":null,"term":"GO:0045116"},{"annotations":[85367],"is_not":false,"summary":null,"term":"GO:0010265"}],"cellular_component":[{"annotations":[85364],"is_not":false,"summary":null,"term":"GO:0031461"},{"annotations":[85365],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["GOA:B6K3Z6","InterPro:IPR016024","EnsemblGenomes-Gn:SJAG_05297","InterPro:IPR039852","EnsemblGenomes-Tr:EEB08203","InterPro:IPR013932","UniProtKB/TrEMBL:B6K3Z6"],"deletion_viability":"unknown","disordered_region_coords":[[420,424]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rga10","uniquename":"SJAG_03338"},{"uniquename":"SJAG_03339"},{"name":"ste4","uniquename":"SJAG_03340"},{"name":"utp8","uniquename":"SJAG_03341"},{"name":"spg1","uniquename":"SJAG_03342"},{"name":"knd1","uniquename":"SJAG_05297"},{"name":"cdc48","uniquename":"SJAG_03345"},{"name":"rst2","uniquename":"SJAG_03346"},{"name":"fsv1","uniquename":"SJAG_03347"},{"name":"mvd1","uniquename":"SJAG_03349"},{"name":"mtr4","uniquename":"SJAG_16455"}],"genes_by_uniquename":{"HGNC:30688":null,"HGNC:30689":null,"SJAG_05297":null,"SPAC1565.07c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.10.10","interpro_id":"IPR011989","interpro_name":"Armadillo-like helical","interpro_type":"Homologous_superfamily","locations":[{"end":1200,"score":0.0,"start":3}],"model":"1u6gC00","name":"Leucine-rich Repeat Variant"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08623","interpro_id":"IPR013932","interpro_name":"TATA-binding protein interacting (TIP20)","interpro_type":"Domain","locations":[{"end":1186,"score":7.199997626562699e-40,"start":1034}],"model":"PF08623","name":"TATA-binding protein interacting (TIP20)"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12696","interpro_id":"IPR039852","interpro_name":"Cullin-associated NEDD8-dissociated protein 1/2","interpro_type":"Family","locations":[{"end":1206,"score":0.0,"start":8}],"model":"PTHR12696:SF0","name":"TIP120"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":631,"score":5.490000047501867e-27,"start":10},{"end":1195,"score":2.2599999933329937e-36,"start":628}],"model":"0049802","name":"ARM repeat"}],"location":{"chromosome_name":"supercont5.2","end_pos":900982,"start_pos":897300,"strand":"reverse"},"low_complexity_region_coords":[[148,159],[284,296],[325,336],[340,352],[702,712],[1005,1016],[1113,1127],[1205,1207]],"name":"knd1","ortholog_annotations":[{"gene_uniquename":"SJAG_05297","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30688","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05297","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30689","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05297","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1565.07c","reference_uniquename":"PMID:21511999"}],"product":"Cullin-associated NEDD8-dissociated protein Knd1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0065003","GO:0005634","GO:0070647"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0010265":null,"GO:0031461":null,"GO:0045116":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05297.1"],"transcripts_by_uniquename":{"SJAG_05297.1":null},"uniprot_identifier":"B6K3Z6","uniquename":"SJAG_05297"}


id: SJAG_05300
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97018],"is_not":false,"summary":null,"term":"GO:0032979"}],"cellular_component":[{"annotations":[97016],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[97017],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[97019],"is_not":false,"summary":null,"term":"GO:0032977"}]},"dbxrefs":["GOA:B6K432","EnsemblGenomes-Tr:EEB08239","InterPro:IPR028055","UniProtKB/TrEMBL:B6K432","EnsemblGenomes-Gn:SJAG_05300","InterPro:IPR001708"],"deletion_viability":"unknown","disordered_region_coords":[[344,361]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mzt1","uniquename":"SJAG_07018"},{"uniquename":"SJAG_03377"},{"uniquename":"SJAG_03378"},{"name":"cyk3","uniquename":"SJAG_03379"},{"name":"aip1","uniquename":"SJAG_03380"},{"name":"oxa101","uniquename":"SJAG_05300"},{"name":"rpl30","uniquename":"SJAG_03383"},{"name":"wis4","uniquename":"SJAG_03384"},{"name":"gid4","uniquename":"SJAG_03385"},{"name":"ppk13","uniquename":"SJAG_03386"},{"name":"snt2","uniquename":"SJAG_03387"}],"genes_by_uniquename":{"HGNC:8526":null,"SJAG_05300":null,"SPAC9G1.04":null,"YER154W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02096","interpro_id":"IPR028055","interpro_name":"Membrane insertase YidC/Oxa/ALB, C-terminal","interpro_type":"Domain","locations":[{"end":286,"score":6.600000093475036e-22,"start":91}],"model":"PF02096","name":"60Kd inner membrane protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12428","interpro_id":"IPR001708","interpro_name":"Membrane insertase YidC/ALB3/OXA1/COX18","interpro_type":"Family","locations":[{"end":338,"score":0.0,"start":52}],"model":"PTHR12428:SF66","name":"OXA1"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR03592","interpro_id":"IPR028055","interpro_name":"Membrane insertase YidC/Oxa/ALB, C-terminal","interpro_type":"Domain","locations":[{"end":286,"score":1.2000000234497777e-24,"start":91}],"model":"TIGR03592","name":"membrane protein insertase YidC"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd20069","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":286,"score":0.0,"start":88}],"model":"cd20069","name":"Five transmembrane core domain of mitochondrial inner membrane protein Oxa1 and similar proteins"}],"location":{"chromosome_name":"supercont5.2","end_pos":990248,"start_pos":989094,"strand":"reverse"},"name":"oxa101","ortholog_annotations":[{"gene_uniquename":"SJAG_05300","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8526","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05300","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC9G1.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05300","ortholog_taxonid":4932,"ortholog_uniquename":"YER154W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial inner membrane insertase Oxa101","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0061024","GO:0007005","GO:0140104","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0005743":null,"GO:0032977":null,"GO:0032979":null},"tm_domain_coords":[[89,111],[161,183],[213,230],[251,273]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05300.1"],"transcripts_by_uniquename":{"SJAG_05300.1":null},"uniprot_identifier":"B6K432","uniquename":"SJAG_05300"}


id: SJAG_05301
data:
  {"coiled_coil_coords":[[559,579]],"cv_annotations":{"biological_process":[{"annotations":[93439],"is_not":false,"summary":null,"term":"GO:1902975"}],"cellular_component":[{"annotations":[93433],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[93434],"is_not":false,"summary":null,"term":"GO:0031261"},{"annotations":[93435,93436],"is_not":false,"summary":null,"term":"GO:0005664"},{"annotations":[93437],"is_not":false,"summary":null,"term":"GO:0005656"},{"annotations":[93438],"is_not":false,"summary":null,"term":"GO:0043596"}],"molecular_function":[{"annotations":[93440],"is_not":false,"summary":null,"term":"GO:0003688"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08247","GOA:B6K440","InterPro:IPR020795","InterPro:IPR040855","EnsemblGenomes-Gn:SJAG_05301","UniProtKB/TrEMBL:B6K440"],"deletion_viability":"unknown","disordered_region_coords":[[35,38],[361,370],[699,698],[766,776],[780,781],[16,21],[662,681]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gid4","uniquename":"SJAG_03385"},{"name":"ppk13","uniquename":"SJAG_03386"},{"name":"snt2","uniquename":"SJAG_03387"},{"name":"hsr1","uniquename":"SJAG_03388"},{"uniquename":"SJAG_03390"},{"name":"orc3","uniquename":"SJAG_05301"},{"name":"sdd3","uniquename":"SJAG_03393"},{"name":"mug151","uniquename":"SJAG_03394"},{"name":"mdm31","uniquename":"SJAG_03395"},{"name":"ste24","uniquename":"SJAG_03396"},{"uniquename":"SJAG_03398"}],"genes_by_uniquename":{"HGNC:8489":null,"SJAG_05301":null,"SPAC3H1.01c":null,"YLL004W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07034","interpro_id":"IPR045667","interpro_name":"Origin recognition complex subunit 3, N-terminal","interpro_type":"Domain","locations":[{"end":309,"score":0.0001900000061141327,"start":176}],"model":"PF07034","name":"Origin recognition complex (ORC) subunit 3 N-terminus"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF18137","interpro_id":"IPR040855","interpro_name":"Origin recognition complex subunit 3, winged helix C-terminal","interpro_type":"Domain","locations":[{"end":821,"score":7.199999872485958e-22,"start":722}],"model":"PF18137","name":"Origin recognition complex winged helix C-terminal"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12748","interpro_id":"IPR020795","interpro_name":"Origin recognition complex, subunit 3","interpro_type":"Family","locations":[{"end":822,"score":0.0,"start":5}],"model":"PTHR12748:SF0","name":"ORIGIN RECOGNITION COMPLEX SUBUNIT 3"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd20704","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":309,"score":7.502489838367553e-34,"start":60},{"end":821,"score":4.5389501157418465e-37,"start":613}],"model":"cd20704","name":"Origin recognition complex subunit 3"}],"location":{"chromosome_name":"supercont5.2","end_pos":1010080,"start_pos":1007532,"strand":"reverse"},"low_complexity_region_coords":[[22,34],[193,204],[409,428],[510,527],[580,584],[651,660],[682,698]],"name":"orc3","ortholog_annotations":[{"gene_uniquename":"SJAG_05301","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8489","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05301","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H1.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05301","ortholog_taxonid":4932,"ortholog_uniquename":"YLL004W","reference_uniquename":"PMID:29761456"}],"product":"origin recognition complex subunit Orc3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006260","GO:0005654","GO:0005694","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0003688":null,"GO:0005656":null,"GO:0005664":null,"GO:0031261":null,"GO:0043596":null,"GO:1902975":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05301.1"],"transcripts_by_uniquename":{"SJAG_05301.1":null},"uniprot_identifier":"B6K440","uniquename":"SJAG_05301"}


id: SJAG_05302
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110785],"is_not":false,"summary":null,"term":"GO:0033617"},{"annotations":[110786],"is_not":false,"summary":null,"term":"GO:0032979"},{"annotations":[110787],"is_not":false,"summary":null,"term":"GO:0051204"}],"cellular_component":[{"annotations":[110783],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[110784],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[110788],"is_not":false,"summary":null,"term":"GO:0032977"}]},"dbxrefs":["InterPro:IPR001708","GOA:B6K4C1","UniProtKB/TrEMBL:B6K4C1","EnsemblGenomes-Tr:EEB08328","EnsemblGenomes-Gn:SJAG_05302"],"deletion_viability":"unknown","disordered_region_coords":[[209,212]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"lcf1","uniquename":"SJAG_03471"},{"name":"tif307","uniquename":"SJAG_03472"},{"name":"scr1","uniquename":"SJAG_03473"},{"uniquename":"SJAG_06600"},{"name":"sua1","uniquename":"SJAG_03475"},{"name":"cox18","uniquename":"SJAG_05302"},{"name":"zta1","uniquename":"SJAG_03476"},{"name":"ist1","uniquename":"SJAG_05303"},{"name":"dbp6","uniquename":"SJAG_03479"},{"name":"eaf1","uniquename":"SJAG_03481"},{"name":"ptc2","uniquename":"SJAG_03482"}],"genes_by_uniquename":{"HGNC:26801":null,"SJAG_05302":null,"SPCC1442.15c":null,"YGR062C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02096","interpro_id":"IPR028055","interpro_name":"Membrane insertase YidC/Oxa/ALB, C-terminal","interpro_type":"Domain","locations":[{"end":200,"score":3.4999999343199306e-8,"start":14}],"model":"PF02096","name":"60Kd inner membrane protein"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12428","interpro_id":"IPR001708","interpro_name":"Membrane insertase YidC/ALB3/OXA1/COX18","interpro_type":"Family","locations":[{"end":206,"score":2.2999999811387275e-33,"start":10}],"model":"PTHR12428:SF34","name":"OXA1"}],"location":{"chromosome_name":"supercont5.2","end_pos":1163841,"start_pos":1163203,"strand":"reverse"},"name":"cox18","ortholog_annotations":[{"gene_uniquename":"SJAG_05302","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26801","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05302","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1442.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05302","ortholog_taxonid":4932,"ortholog_uniquename":"YGR062C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial inner membrane insertase Cox18","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0061024","GO:0065003","GO:0005739","GO:0140104","GO:0007005"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0005743":null,"GO:0032977":null,"GO:0032979":null,"GO:0033617":null,"GO:0051204":null},"tm_domain_coords":[[15,37],[152,174]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05302.1"],"transcripts_by_uniquename":{"SJAG_05302.1":null},"uniprot_identifier":"B6K4C1","uniquename":"SJAG_05302"}


id: SJAG_05303
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110800],"is_not":false,"summary":null,"term":"GO:0043328"}],"cellular_component":[{"annotations":[110795],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[110796],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[110797],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[110798],"is_not":false,"summary":null,"term":"GO:0180028"},{"annotations":[110799],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05303","EnsemblGenomes-Tr:EEB08330","UniProtKB/TrEMBL:B6K4C3"],"deletion_viability":"unknown","disordered_region_coords":[[94,96],[149,168],[98,98],[122,128]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"scr1","uniquename":"SJAG_03473"},{"uniquename":"SJAG_06600"},{"name":"sua1","uniquename":"SJAG_03475"},{"name":"cox18","uniquename":"SJAG_05302"},{"name":"zta1","uniquename":"SJAG_03476"},{"name":"ist1","uniquename":"SJAG_05303"},{"name":"dbp6","uniquename":"SJAG_03479"},{"name":"eaf1","uniquename":"SJAG_03481"},{"name":"ptc2","uniquename":"SJAG_03482"},{"name":"meu10","uniquename":"SJAG_03483"},{"name":"cbf12","uniquename":"SJAG_03484"}],"genes_by_uniquename":{"HGNC:28977":null,"SJAG_05303":null,"SPCC1442.17c":null,"YNL265C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1260.60","interpro_id":"IPR042277","interpro_name":"Vacuolar protein sorting-associated protein IST1-like","interpro_type":"Homologous_superfamily","locations":[{"end":102,"score":7.000000096013537e-6,"start":7}],"model":"3frrA00","name":"Vacuolar protein sorting-associated protein Ist1"}],"location":{"chromosome_name":"supercont5.2","end_pos":1166262,"start_pos":1165547,"strand":"reverse"},"low_complexity_region_coords":[[99,121],[129,148]],"name":"ist1","ortholog_annotations":[{"gene_uniquename":"SJAG_05303","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28977","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05303","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1442.17c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05303","ortholog_taxonid":4932,"ortholog_uniquename":"YNL265C","reference_uniquename":"PMID:29761456"}],"product":"MVB sorting pathway protein Ist1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0005829","GO:0031410","GO:0005794","GO:0005768","GO:0016192","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005768":null,"GO:0005794":null,"GO:0005829":null,"GO:0043328":null,"GO:0180028":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05303.1"],"transcripts_by_uniquename":{"SJAG_05303.1":null},"uniprot_identifier":"B6K4C3","uniquename":"SJAG_05303"}


id: SJAG_05304
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108661],"is_not":false,"summary":null,"term":"GO:0030163"},{"annotations":[108662],"is_not":false,"summary":null,"term":"GO:0032933"}],"cellular_component":[{"annotations":[108659],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[108660],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[108663],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[108664],"is_not":false,"summary":null,"term":"GO:0004674"}]},"dbxrefs":["GOA:B6K4F6","EnsemblGenomes-Gn:SJAG_05304","InterPro:IPR017441","InterPro:IPR008271","EnsemblGenomes-Tr:EEB08363","InterPro:IPR000719","InterPro:IPR039192","InterPro:IPR011009","UniProtKB/TrEMBL:B6K4F6"],"deletion_viability":"unknown","disordered_region_coords":[[12,16],[267,268],[271,281],[325,327]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"crt10","uniquename":"SJAG_03507"},{"name":"csc2","uniquename":"SJAG_03508"},{"name":"erg32","uniquename":"SJAG_03509"},{"uniquename":"SJAG_03510"},{"name":"vps68","uniquename":"SJAG_03511"},{"name":"gsk31","uniquename":"SJAG_05304"},{"name":"tom40","uniquename":"SJAG_03515"},{"uniquename":"SJAG_03516"},{"name":"cbp4","uniquename":"SJAG_05305"},{"name":"pho7","uniquename":"SJAG_03519"},{"name":"knh4","uniquename":"SJAG_03521"}],"genes_by_uniquename":{"HGNC:4616":null,"HGNC:4617":null,"SJAG_05304":null,"SPBC8D2.01":null,"YDL079C":null,"YMR139W":null,"YNL307C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.510.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":362,"score":0.0,"start":109}],"model":"4e7wA02","name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.200.20","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":108,"score":4.100000163464692e-30,"start":15}],"model":"1q5kA01","name":"Phosphorylase Kinase; domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00069","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":312,"score":0.0,"start":28}],"model":"PF00069","name":"Protein kinase domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00107","interpro_id":"IPR017441","interpro_name":"Protein kinase, ATP binding site","interpro_type":"Binding_site","locations":[{"end":57,"score":0.0,"start":34}],"model":"PS00107","name":"Protein kinases ATP-binding region signature"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00108","interpro_id":"IPR008271","interpro_name":"Serine/threonine-protein kinase, active site","interpro_type":"Active_site","locations":[{"end":161,"score":0.0,"start":149}],"model":"PS00108","name":"Serine/Threonine protein kinases active-site signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50011","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":312,"score":0.0,"start":28}],"model":"PS50011","name":"Protein kinase domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR24057","interpro_id":"IPR050591","interpro_name":"Glycogen Synthase Kinase-3","interpro_type":"Family","locations":[{"end":363,"score":0.0,"start":14}],"model":"PTHR24057:SF72","name":"GLYCOGEN SYNTHASE KINASE-3 ALPHA"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00220","interpro_id":"IPR000719","interpro_name":"Protein kinase domain","interpro_type":"Domain","locations":[{"end":312,"score":0.0,"start":28}],"model":"SM00220","name":"Serine/Threonine protein kinases, catalytic domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56112","interpro_id":"IPR011009","interpro_name":"Protein kinase-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":321,"score":0.0,"start":27}],"model":"0038477","name":"Protein kinase-like (PK-like)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd14137","interpro_id":"IPR039192","interpro_name":"Glycogen synthase kinase 3, catalytic domain","interpro_type":"Domain","locations":[{"end":315,"score":0.0,"start":23}],"model":"cd14137","name":"The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3"}],"location":{"chromosome_name":"supercont5.2","end_pos":1253511,"start_pos":1251984,"strand":"reverse"},"low_complexity_region_coords":[[32,47],[272,284]],"name":"gsk31","ortholog_annotations":[{"gene_uniquename":"SJAG_05304","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4616","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05304","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4617","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05304","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC8D2.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05304","ortholog_taxonid":4932,"ortholog_uniquename":"YDL079C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05304","ortholog_taxonid":4932,"ortholog_uniquename":"YMR139W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05304","ortholog_taxonid":4932,"ortholog_uniquename":"YNL307C","reference_uniquename":"PMID:29761456"}],"product":"serine/threonine protein kinase Gsk31","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016301","GO:0140096","GO:0005634","GO:0023052","GO:0005829","GO:0004672","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004674":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0030163":null,"GO:0032933":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05304.1"],"transcripts_by_uniquename":{"SJAG_05304.1":null},"uniprot_identifier":"B6K4F6","uniquename":"SJAG_05304"}


id: SJAG_05305
data:
  {"coiled_coil_coords":[[42,69]],"cv_annotations":{"biological_process":[{"annotations":[103695],"is_not":false,"summary":null,"term":"GO:0034551"}],"cellular_component":[{"annotations":[103693],"is_not":false,"summary":null,"term":"GO:0005743"},{"annotations":[103694],"is_not":false,"summary":null,"term":"GO:0005739"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05305","EnsemblGenomes-Tr:EEB08366","UniProtKB/TrEMBL:B6K4F9","InterPro:IPR012420"],"deletion_viability":"unknown","disordered_region_coords":[[33,50],[56,61]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03510"},{"name":"vps68","uniquename":"SJAG_03511"},{"name":"gsk31","uniquename":"SJAG_05304"},{"name":"tom40","uniquename":"SJAG_03515"},{"uniquename":"SJAG_03516"},{"name":"cbp4","uniquename":"SJAG_05305"},{"name":"pho7","uniquename":"SJAG_03519"},{"name":"knh4","uniquename":"SJAG_03521"},{"uniquename":"SJAG_03522"},{"uniquename":"SJAG_03523"},{"name":"psd1","uniquename":"SJAG_03524"}],"genes_by_uniquename":{"HGNC:34399":null,"SJAG_05305":null,"SPBC27B12.14":null,"YGR174C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07960","interpro_id":"IPR012420","interpro_name":"Cbp4","interpro_type":"Family","locations":[{"end":62,"score":5.400000108526926e-13,"start":4}],"model":"PF07960","name":"CBP4"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28202","interpro_id":"IPR012420","interpro_name":"Cbp4","interpro_type":"Family","locations":[{"end":59,"score":1.999999943436137e-9,"start":3}],"model":"PTHR28202:SF1","name":"ASSEMBLY FACTOR CBP4"}],"location":{"chromosome_name":"supercont5.2","end_pos":1259954,"start_pos":1259446,"strand":"reverse"},"name":"cbp4","ortholog_annotations":[{"gene_uniquename":"SJAG_05305","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:34399","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05305","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC27B12.14","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05305","ortholog_taxonid":4932,"ortholog_uniquename":"YGR174C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial respiratory complex III assembly protein Cbp4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005739","GO:0065003","GO:0007005"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0005743":null,"GO:0034551":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05305.1"],"transcripts_by_uniquename":{"SJAG_05305.1":null},"uniprot_identifier":"B6K4F9","uniquename":"SJAG_05305"}


id: SJAG_05306
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109222],"is_not":false,"summary":null,"term":"GO:0070072"}],"cellular_component":[{"annotations":[109220],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[109221],"is_not":false,"summary":null,"term":"GO:0005789"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K4L1","EnsemblGenomes-Gn:SJAG_05306","EnsemblGenomes-Tr:EEB08418","InterPro:IPR013945","GOA:B6K4L1"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sof1","uniquename":"SJAG_03569"},{"name":"cct3","uniquename":"SJAG_03570"},{"uniquename":"SJAG_03571"},{"name":"pus7","uniquename":"SJAG_03572"},{"name":"med14","uniquename":"SJAG_03573"},{"name":"pkr1","uniquename":"SJAG_05306"},{"name":"sdh7","uniquename":"SJAG_03574"},{"name":"apc2","uniquename":"SJAG_03575"},{"name":"ssr4","uniquename":"SJAG_03576"},{"name":"mtm1","uniquename":"SJAG_03577"},{"name":"rpa2","uniquename":"SJAG_03578"}],"genes_by_uniquename":{"SJAG_05306":null,"SPBP23A10.02":null,"YMR123W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08636","interpro_id":"IPR013945","interpro_name":"V-type ATPase assembly factor Pkr1","interpro_type":"Family","locations":[{"end":72,"score":1.3999999555717316e-21,"start":1}],"model":"PF08636","name":"ER protein Pkr1"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28251","interpro_id":"IPR013945","interpro_name":"V-type ATPase assembly factor Pkr1","interpro_type":"Family","locations":[{"end":79,"score":5.40000014399643e-17,"start":2}],"model":"PTHR28251:SF1","name":"V-TYPE ATPASE ASSEMBLY FACTOR PKR1"}],"location":{"chromosome_name":"supercont5.2","end_pos":1380040,"start_pos":1379581,"strand":"forward"},"name":"pkr1","ortholog_annotations":[{"gene_uniquename":"SJAG_05306","ortholog_taxonid":4896,"ortholog_uniquename":"SPBP23A10.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05306","ortholog_taxonid":4932,"ortholog_uniquename":"YMR123W","reference_uniquename":"PMID:29761456"}],"product":"ER membrane V-ATPase assembly factor Pkr1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005783","GO:0065003","GO:0005789"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0005789":null,"GO:0070072":null},"tm_domain_coords":[[20,42],[47,69]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05306.1"],"transcripts_by_uniquename":{"SJAG_05306.1":null},"uniprot_identifier":"B6K4L1","uniquename":"SJAG_05306"}


id: SJAG_05307
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[89092],"is_not":false,"summary":null,"term":"GO:0005730"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K2T6","EnsemblGenomes-Tr:EEB08576","EnsemblGenomes-Gn:SJAG_05307"],"deletion_viability":"unknown","disordered_region_coords":[[67,74],[78,86],[92,104],[106,117]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nup124","uniquename":"SJAG_03729"},{"name":"ddx27","uniquename":"SJAG_03730"},{"name":"cmr2","uniquename":"SJAG_03731"},{"name":"tif52","uniquename":"SJAG_03732"},{"name":"csn4","uniquename":"SJAG_03733"},{"name":"mug103","uniquename":"SJAG_05307"},{"name":"pso2","uniquename":"SJAG_03734"},{"name":"esc1","uniquename":"SJAG_03735"},{"name":"spc3","uniquename":"SJAG_03737"},{"uniquename":"SJAG_05308"},{"uniquename":"SJAG_03739"}],"genes_by_uniquename":{"SJAG_05307":null,"SPAC22A12.02c":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.2","end_pos":1757896,"start_pos":1757540,"strand":"forward"},"name":"mug103","ortholog_annotations":[{"gene_uniquename":"SJAG_05307","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC22A12.02c"}],"product":"Schizosaccharomyces specific protein Mug103","references_by_uniquename":{"GO_REF:0000107":null},"subset_termids":["GO:0005730","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005730":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05307.1"],"transcripts_by_uniquename":{"SJAG_05307.1":null},"uniprot_identifier":"B6K2T6","uniquename":"SJAG_05307"}


id: SJAG_05308
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[94529],"is_not":false,"summary":null,"term":"GO:0005794"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08580","EnsemblGenomes-Gn:SJAG_05308","InterPro:IPR018830","GOA:B6K2U0","UniProtKB/TrEMBL:B6K2U0"],"deletion_viability":"unknown","disordered_region_coords":[[329,351]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"csn4","uniquename":"SJAG_03733"},{"name":"mug103","uniquename":"SJAG_05307"},{"name":"pso2","uniquename":"SJAG_03734"},{"name":"esc1","uniquename":"SJAG_03735"},{"name":"spc3","uniquename":"SJAG_03737"},{"uniquename":"SJAG_05308"},{"uniquename":"SJAG_03739"},{"name":"csr102","uniquename":"SJAG_03741"},{"name":"pdc202","uniquename":"SJAG_03743"},{"name":"ysp2","uniquename":"SJAG_03744"},{"name":"rrp6","uniquename":"SJAG_03745"}],"genes_by_uniquename":{"SJAG_05308":null,"SPAC56F8.12":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10361","interpro_id":"IPR018830","interpro_name":"Protein of unknown function DUF2434","interpro_type":"Family","locations":[{"end":290,"score":0.0,"start":17}],"model":"PF10361","name":"Protein of unknown function (DUF2434)"}],"location":{"chromosome_name":"supercont5.2","end_pos":1767875,"start_pos":1766718,"strand":"forward"},"low_complexity_region_coords":[[106,119],[194,205]],"ortholog_annotations":[{"gene_uniquename":"SJAG_05308","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC56F8.12","reference_uniquename":"PMID:21511999"}],"product":"DUF2434 family conserved fungal multispanning membrane protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005794":null},"tm_domain_coords":[[61,83],[104,124],[134,156],[183,205],[229,248],[261,283],[298,320]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05308.1"],"transcripts_by_uniquename":{"SJAG_05308.1":null},"uniprot_identifier":"B6K2U0","uniquename":"SJAG_05308"}


id: SJAG_05309
data:
  {"coiled_coil_coords":[[10,41],[44,102],[107,218],[247,336],[344,427],[431,493],[515,535],[557,616],[627,654],[662,910],[918,1036],[1068,1130],[1145,1165],[1209,1355],[1384,1439],[1444,1478],[1494,1553],[1561,1595],[1603,1630],[1648,1668],[1726,1756]],"cv_annotations":{"biological_process":[{"annotations":[88389],"is_not":false,"summary":null,"term":"GO:0031322"}],"cellular_component":[{"annotations":[88387],"is_not":false,"summary":null,"term":"GO:0035974"},{"annotations":[88388],"is_not":false,"summary":null,"term":"GO:0044732"}]},"deletion_viability":"unknown","disordered_region_coords":[[1,9],[42,43],[93,94],[103,106],[184,185],[195,196],[202,207],[219,225],[248,249],[275,276],[300,328],[330,332],[341,342],[344,346],[349,362],[365,374],[376,383],[386,391],[393,395],[397,398],[428,430],[435,436],[439,440],[442,449],[453,454],[459,461],[463,465],[474,475],[485,486],[505,506],[519,520],[557,558],[561,562],[565,597],[606,608],[617,622],[624,626],[628,629],[655,661],[683,825],[827,829],[831,843],[845,892],[897,899],[901,906],[908,909],[915,916],[949,951],[961,962],[971,972],[974,980],[989,990],[999,1000],[1002,1007],[1009,1011],[1039,1042],[1044,1045],[1048,1049],[1073,1074],[1076,1091],[1103,1106],[1170,1171],[1180,1185],[1217,1218],[1220,1221],[1246,1270],[1279,1281],[1283,1284],[1286,1317],[1356,1365],[1367,1382],[1388,1389],[1440,1443],[1479,1489],[1493,1493],[1529,1531],[1533,1539],[1542,1549],[1555,1556],[1559,1560],[1572,1573],[1631,1632],[1634,1636],[1638,1639],[1664,1667],[1691,1692],[1694,1695],[1697,1698],[1722,1725],[1729,1731],[1735,1738]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubp8","uniquename":"SJAG_03752"},{"name":"mkh1","uniquename":"SJAG_03753"},{"name":"sro7","uniquename":"SJAG_03754"},{"name":"tsr3","uniquename":"SJAG_03755"},{"name":"gga21","uniquename":"SJAG_03756"},{"name":"spo15","uniquename":"SJAG_05309"},{"name":"rsc58","uniquename":"SJAG_03758"},{"uniquename":"SJAG_03759"},{"name":"fsh2","uniquename":"SJAG_03760"},{"name":"rpc11","uniquename":"SJAG_03761"},{"name":"rps22a","uniquename":"SJAG_03762"}],"genes_by_uniquename":{"SJAG_05309":null,"SPAC1F3.06c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.287.1490","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":453,"score":0.00002300000051036477,"start":295},{"end":785,"score":8.099999831756577e-6,"start":619},{"end":1386,"score":2.2999999682582484e-9,"start":1216},{"end":1640,"score":3.199999980552093e-7,"start":1482}],"model":"3na7A00","name":""},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR18937","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":689,"score":0.0,"start":372}],"model":"PTHR18937:SF171","name":"STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57997","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1045,"score":1.7700000398690463e-7,"start":793},{"end":1472,"score":0.000015699999494245276,"start":1273}],"model":"0053395","name":"Tropomyosin"}],"location":{"chromosome_name":"supercont5.2","end_pos":1813064,"start_pos":1806131,"strand":"reverse"},"low_complexity_region_coords":[[42,43],[145,156],[184,201],[269,287],[309,327],[702,713],[755,766],[969,981],[1001,1021],[1214,1231],[1394,1405],[1449,1467],[1562,1575]],"name":"spo15","ortholog_annotations":[{"gene_uniquename":"SJAG_05309","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1F3.06c"}],"product":"mitotic and meiotic spindle pole body protein, gamma tubulin complex linker-related Spo15","references_by_uniquename":{"GO_REF:0000107":null},"subset_termids":["GO:0000226","GO:0005816","GO:0030437","GO:0015630"],"synonyms":[{"name":"SJAG_05310","type":"exact"}],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0031322":null,"GO:0035974":null,"GO:0044732":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05309.1"],"transcripts_by_uniquename":{"SJAG_05309.1":null},"uniprot_identifier":"B6K2V7","uniquename":"SJAG_05309"}


id: SJAG_05311
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108634],"is_not":false,"summary":null,"term":"GO:0051999"},{"annotations":[108635],"is_not":false,"summary":null,"term":"GO:0006675"},{"annotations":[108636],"is_not":false,"summary":null,"term":"GO:0030148"}],"cellular_component":[{"annotations":[108632],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[108633],"is_not":false,"summary":null,"term":"GO:0005789"}],"molecular_function":[{"annotations":[108637],"is_not":false,"summary":null,"term":"GO:0005506"},{"annotations":[108638],"is_not":false,"summary":null,"term":"GO:0042284"},{"annotations":[108639],"is_not":false,"summary":null,"term":"GO:0000170"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08616","InterPro:IPR006694","UniProtKB/TrEMBL:B6K512","GOA:B6K512","EnsemblGenomes-Gn:SJAG_05311"],"deletion_viability":"unknown","disordered_region_coords":[[287,296]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vps24","uniquename":"SJAG_03783"},{"uniquename":"SJAG_03782"},{"name":"dhm2","uniquename":"SJAG_05312"},{"name":"pex19","uniquename":"SJAG_03781"},{"name":"pfh1","uniquename":"SJAG_03780"},{"name":"sur2","uniquename":"SJAG_05311"},{"uniquename":"SJAG_03778"},{"uniquename":"SJAG_03777"},{"name":"hfi1","uniquename":"SJAG_03776"},{"name":"his4","uniquename":"SJAG_03775"},{"name":"rft1","uniquename":"SJAG_03774"}],"genes_by_uniquename":{"SJAG_05311":null,"SPBC887.15c":null,"YDR297W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04116","interpro_id":"IPR006694","interpro_name":"Fatty acid hydroxylase","interpro_type":"Domain","locations":[{"end":271,"score":1.599999949224836e-19,"start":135}],"model":"PF04116","name":"Fatty acid hydroxylase"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11863","interpro_id":"IPR050307","interpro_name":"Sterol Desaturase and Related Enzymes","interpro_type":"Family","locations":[{"end":275,"score":0.0,"start":20}],"model":"PTHR11863:SF226","name":"STEROL DESATURASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":3813237,"start_pos":3812347,"strand":"reverse"},"name":"sur2","ortholog_annotations":[{"gene_uniquename":"SJAG_05311","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC887.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05311","ortholog_taxonid":4932,"ortholog_uniquename":"YDR297W","reference_uniquename":"PMID:29761456"}],"product":"sphingosine hydroxylase/sphingolipid delta-4 desaturase Sur2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006629","GO:0005789","GO:0005783","GO:0016491"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000170":null,"GO:0005506":null,"GO:0005783":null,"GO:0005789":null,"GO:0006675":null,"GO:0030148":null,"GO:0042284":null,"GO:0051999":null},"tm_domain_coords":[[15,37],[65,86],[120,142]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05311.1"],"transcripts_by_uniquename":{"SJAG_05311.1":null},"uniprot_identifier":"B6K512","uniquename":"SJAG_05311"}


id: SJAG_05312
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[86541],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[86542],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08619","UniProtKB/TrEMBL:B6K515","EnsemblGenomes-Gn:SJAG_05312"],"deletion_viability":"unknown","disordered_region_coords":[[1,48],[50,51],[73,75],[77,80]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"atd1","uniquename":"SJAG_03786"},{"name":"abc1","uniquename":"SJAG_03785"},{"name":"wos2","uniquename":"SJAG_03784"},{"name":"vps24","uniquename":"SJAG_03783"},{"uniquename":"SJAG_03782"},{"name":"dhm2","uniquename":"SJAG_05312"},{"name":"pex19","uniquename":"SJAG_03781"},{"name":"pfh1","uniquename":"SJAG_03780"},{"name":"sur2","uniquename":"SJAG_05311"},{"uniquename":"SJAG_03778"},{"uniquename":"SJAG_03777"}],"genes_by_uniquename":{"SJAG_05312":null,"SPAC17C9.15c":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.2","end_pos":3807030,"start_pos":3806758,"strand":"forward"},"name":"dhm2","ortholog_annotations":[{"gene_uniquename":"SJAG_05312","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17C9.15c","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein Dhm2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05312.1"],"transcripts_by_uniquename":{"SJAG_05312.1":null},"uniprot_identifier":"B6K515","uniquename":"SJAG_05312"}


id: SJAG_05313
data:
  {"coiled_coil_coords":[[653,673]],"cv_annotations":{"biological_process":[{"annotations":[111098],"is_not":false,"summary":null,"term":"GO:0045944"},{"annotations":[111099],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[111094],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[111095],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[111096],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[111097],"is_not":false,"summary":null,"term":"GO:0016514"}],"molecular_function":[{"annotations":[111100],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[111101],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[111102],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[57410],"is_not":false,"summary":null,"term":"GO:0042393"},{"annotations":[111103],"is_not":false,"summary":null,"term":"GO:0140751"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08644","InterPro:IPR000330","InterPro:IPR001650","InterPro:IPR027417","GOA:B6K540","InterPro:IPR018359","InterPro:IPR036427","UniProtKB/TrEMBL:B6K540","InterPro:IPR029295","InterPro:IPR014978","InterPro:IPR014001","InterPro:IPR001487","InterPro:IPR038718","EnsemblGenomes-Gn:SJAG_05313"],"deletion_viability":"unknown","disordered_region_coords":[[39,40],[42,45],[62,64],[90,92],[322,329],[375,375],[391,397],[422,423],[426,428],[455,469],[498,501],[503,504],[508,511],[682,683],[689,690],[762,778],[1231,1236],[1279,1281],[1290,1319],[1332,1337],[1339,1352],[1380,1380],[1388,1389],[1395,1398],[1415,1416],[1421,1437],[1440,1441],[1542,1551],[1575,1580],[1583,1586],[1612,1626],[95,265],[276,304],[430,432],[744,749],[1594,1602]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bet4","uniquename":"SJAG_03810"},{"name":"fzr3","uniquename":"SJAG_03809"},{"name":"mug163","uniquename":"SJAG_06256"},{"uniquename":"SJAG_03808"},{"uniquename":"SJAG_05314"},{"name":"snf22","uniquename":"SJAG_05313"},{"name":"ski3","uniquename":"SJAG_03805"},{"name":"dld2","uniquename":"SJAG_03804"},{"uniquename":"SJAG_03803"},{"name":"amk2","uniquename":"SJAG_03802"},{"name":"pbn1","uniquename":"SJAG_03801"}],"genes_by_uniquename":{"HGNC:11098":null,"HGNC:11100":null,"SJAG_05313":null,"SPCC1620.14c":null,"YIL126W":null,"YOR290C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.920.10","interpro_id":"IPR036427","interpro_name":"Bromodomain-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1594,"score":1.799999975007332e-35,"start":1453}],"model":"3iu6A00","name":"Bromodomain-like"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.10810","interpro_id":"IPR038718","interpro_name":"SNF2-like, N-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1033,"score":0.0,"start":775}],"model":"1z3iX01","name":"Tandem AAA-ATPase domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":1340,"score":0.0,"start":1040}],"model":"5jxtD00","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00176","interpro_id":"IPR000330","interpro_name":"SNF2, N-terminal","interpro_type":"Domain","locations":[{"end":1102,"score":0.0,"start":810}],"model":"PF00176","name":"SNF2-related domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00271","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal domain-like","interpro_type":"Domain","locations":[{"end":1240,"score":1.7999999428779406e-21,"start":1127}],"model":"PF00271","name":"Helicase conserved C-terminal domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00439","interpro_id":"IPR001487","interpro_name":"Bromodomain","interpro_type":"Domain","locations":[{"end":1550,"score":5.600000173838687e-17,"start":1473}],"model":"PF00439","name":"Bromodomain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08880","interpro_id":"IPR014978","interpro_name":"Glutamine-Leucine-Glutamine, QLQ","interpro_type":"Domain","locations":[{"end":364,"score":6.099999845521342e-12,"start":330}],"model":"PF08880","name":"QLQ"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00503","interpro_id":"IPR001487","interpro_name":"Bromodomain","interpro_type":"Domain","locations":[{"end":1509,"score":1.0999999739205735e-12,"start":1493},{"end":1527,"score":1.0999999739205735e-12,"start":1509},{"end":1546,"score":1.0999999739205735e-12,"start":1527}],"model":"PR00503","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00633","interpro_id":"IPR018359","interpro_name":"Bromodomain, conserved site","interpro_type":"Conserved_site","locations":[{"end":1538,"score":0.0,"start":1481}],"model":"PS00633","name":"Bromodomain signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50014","interpro_id":"IPR001487","interpro_name":"Bromodomain","interpro_type":"Domain","locations":[{"end":1546,"score":0.0,"start":1476}],"model":"PS50014","name":"Bromodomain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51192","interpro_id":"IPR014001","interpro_name":"Helicase superfamily 1/2, ATP-binding domain","interpro_type":"Domain","locations":[{"end":984,"score":0.0,"start":819}],"model":"PS51192","name":"Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51194","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal domain-like","interpro_type":"Domain","locations":[{"end":1281,"score":0.0,"start":1130}],"model":"PS51194","name":"Superfamilies 1 and 2 helicase C-terminal domain profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51666","interpro_id":"IPR014978","interpro_name":"Glutamine-Leucine-Glutamine, QLQ","interpro_type":"Domain","locations":[{"end":365,"score":0.0,"start":330}],"model":"PS51666","name":"QLQ domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10799","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1410,"score":0.0,"start":562}],"model":"PTHR10799:SF973","name":"SNF2/RAD54 HELICASE FAMILY"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00297","interpro_id":"IPR001487","interpro_name":"Bromodomain","interpro_type":"Domain","locations":[{"end":1565,"score":1.7999999671600606e-38,"start":1455}],"model":"SM00297","name":"bromo domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00487","interpro_id":"IPR014001","interpro_name":"Helicase superfamily 1/2, ATP-binding domain","interpro_type":"Domain","locations":[{"end":992,"score":4.000000072010038e-35,"start":803}],"model":"SM00487","name":"DEAD-like helicases superfamily"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00490","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal domain-like","interpro_type":"Domain","locations":[{"end":1240,"score":3.900000125515584e-26,"start":1156}],"model":"SM00490","name":"helicase superfamily c-terminal domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00951","interpro_id":"IPR014978","interpro_name":"Glutamine-Leucine-Glutamine, QLQ","interpro_type":"Domain","locations":[{"end":365,"score":5.099999944384835e-14,"start":329}],"model":"SM00951","name":""},{"dbname":"SMART","evidence":"Smart scan","id":"SM01314","interpro_id":"IPR029295","interpro_name":"Snf2, ATP coupling domain","interpro_type":"Domain","locations":[{"end":1404,"score":1.100000021625469e-10,"start":1337}],"model":"SM01314","name":"Snf2-ATP coupling, chromatin remodelling complex"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47370","interpro_id":"IPR036427","interpro_name":"Bromodomain-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1565,"score":4.580000116086244e-31,"start":1454}],"model":"0046608","name":"Bromodomain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":1034,"score":0.0,"start":778},{"end":1339,"score":0.0,"start":1036}],"model":"0051486","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd17996","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":1036,"score":0.0,"start":804}],"model":"cd17996","name":"DEXH-box helicase domain of SMARCA2 and SMARCA4"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd18793","interpro_id":"IPR049730","interpro_name":"SNF2/RAD5-like, C-terminal helicase domain","interpro_type":"Domain","locations":[{"end":1251,"score":0.0,"start":1126}],"model":"cd18793","name":"C-terminal helicase domain of the SNF family helicases"}],"location":{"chromosome_name":"supercont5.2","end_pos":3754834,"start_pos":3749896,"strand":"reverse"},"low_complexity_region_coords":[[59,89],[266,275],[305,321],[376,401],[402,418],[433,454],[490,504],[539,550],[750,761],[946,963],[1372,1379],[1575,1593],[1603,1611]],"name":"snf22","ortholog_annotations":[{"gene_uniquename":"SJAG_05313","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11098","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05313","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11100","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05313","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1620.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05313","ortholog_taxonid":4932,"ortholog_uniquename":"YIL126W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05313","ortholog_taxonid":4932,"ortholog_uniquename":"YOR290C","reference_uniquename":"PMID:29761456"}],"product":"SWI/SNF ATP-dependent chromatin remodeler Snf22","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006355","GO:0072686","GO:0005694","GO:0006325","GO:0006351","GO:0016887","GO:0005634","GO:0140097","GO:0015630"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0003677":null,"GO:0005524":null,"GO:0005634":null,"GO:0016514":null,"GO:0016887":null,"GO:0042393":null,"GO:0045815":null,"GO:0045944":null,"GO:0072686":null,"GO:0140751":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05313.1"],"transcripts_by_uniquename":{"SJAG_05313.1":null},"uniprot_identifier":"B6K540","uniquename":"SJAG_05313"}


id: SJAG_05314
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75002],"is_not":false,"summary":null,"term":"GO:0045820"},{"annotations":[75005],"is_not":false,"summary":null,"term":"GO:0043456"}],"cellular_component":[{"annotations":[111091],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[75004],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[111092],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[75003],"is_not":false,"summary":null,"term":"GO:0004331"},{"annotations":[111093],"is_not":false,"summary":null,"term":"GO:0016791"}]},"dbxrefs":["InterPro:IPR013078","EnsemblGenomes-Gn:SJAG_05314","EnsemblGenomes-Tr:EEB08645","InterPro:IPR029033","UniProtKB/TrEMBL:B6K541"],"deletion_viability":"unknown","disordered_region_coords":[[1,14],[20,23],[36,42],[56,57],[228,238],[240,241]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03811"},{"name":"bet4","uniquename":"SJAG_03810"},{"name":"fzr3","uniquename":"SJAG_03809"},{"name":"mug163","uniquename":"SJAG_06256"},{"uniquename":"SJAG_03808"},{"uniquename":"SJAG_05314"},{"name":"snf22","uniquename":"SJAG_05313"},{"name":"ski3","uniquename":"SJAG_03805"},{"name":"dld2","uniquename":"SJAG_03804"},{"uniquename":"SJAG_03803"},{"name":"amk2","uniquename":"SJAG_03802"}],"genes_by_uniquename":{"SJAG_05314":null,"SPCC1620.13":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.1240","interpro_id":"IPR029033","interpro_name":"Histidine phosphatase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":233,"score":1.5414283107572988e-44,"start":18}],"model":"3dcyA00","name":"Phosphoglycerate mutase-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00300","interpro_id":"IPR013078","interpro_name":"Histidine phosphatase superfamily, clade-1","interpro_type":"Family","locations":[{"end":221,"score":4.399999863489461e-30,"start":24}],"model":"PF00300","name":"Histidine phosphatase superfamily (branch 1)"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR46517","interpro_id":"IPR051695","interpro_name":"Phosphoglycerate Mutase","interpro_type":"Family","locations":[{"end":237,"score":5.300000020079495e-37,"start":157}],"model":"PTHR46517:SF1","name":"FRUCTOSE-2,6-BISPHOSPHATASE TIGAR"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00855","interpro_id":"IPR013078","interpro_name":"Histidine phosphatase superfamily, clade-1","interpro_type":"Family","locations":[{"end":181,"score":5.599999925684503e-18,"start":23}],"model":"SM00855","name":"Phosphoglycerate mutase family"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53254","interpro_id":"IPR029033","interpro_name":"Histidine phosphatase superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":236,"score":6.940000179464742e-34,"start":24}],"model":"0039931","name":"Phosphoglycerate mutase-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd07067","interpro_id":"IPR013078","interpro_name":"Histidine phosphatase superfamily, clade-1","interpro_type":"Family","locations":[{"end":212,"score":2.155159955517813e-20,"start":24}],"model":"cd07067","name":"Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction"}],"location":{"chromosome_name":"supercont5.2","end_pos":3749743,"start_pos":3748976,"strand":"forward"},"low_complexity_region_coords":[[56,65]],"ortholog_annotations":[{"gene_uniquename":"SJAG_05314","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1620.13","reference_uniquename":"PMID:21511999"}],"product":"phosphoglycerate mutase/6-phosphofructo-2-kinase family","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0006091","GO:0005975","GO:0055086","GO:0005634","GO:0005829","GO:0016788"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004331":null,"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0016791":null,"GO:0043456":null,"GO:0045820":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05314.1"],"transcripts_by_uniquename":{"SJAG_05314.1":null},"uniprot_identifier":"B6K541","uniquename":"SJAG_05314"}


id: SJAG_05315
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92580],"is_not":false,"summary":null,"term":"GO:0016558"}],"cellular_component":[{"annotations":[92574],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[92575],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[92576],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[92577],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[92578],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[92579],"is_not":false,"summary":null,"term":"GO:1990429"}],"molecular_function":[{"annotations":[92581],"is_not":false,"summary":null,"term":"GO:0030674"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05315","EnsemblGenomes-Tr:EEB08776","UniProtKB/TrEMBL:B6K5H2"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03951"},{"name":"uba5","uniquename":"SJAG_03950"},{"name":"mtq2","uniquename":"SJAG_03949"},{"uniquename":"SJAG_03948"},{"name":"pup2","uniquename":"SJAG_05316"},{"name":"pex8","uniquename":"SJAG_05315"},{"name":"pos5","uniquename":"SJAG_03946"},{"name":"phf2","uniquename":"SJAG_03945"},{"name":"rsc7","uniquename":"SJAG_03944"},{"name":"ole1","uniquename":"SJAG_03943"},{"name":"hta1","uniquename":"SJAG_03942"}],"genes_by_uniquename":{"SJAG_05315":null,"SPAC323.03c":null,"YGR077C":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.2","end_pos":3424940,"start_pos":3423257,"strand":"reverse"},"low_complexity_region_coords":[[121,133],[289,304]],"name":"pex8","ortholog_annotations":[{"gene_uniquename":"SJAG_05315","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC323.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05315","ortholog_taxonid":4932,"ortholog_uniquename":"YGR077C","reference_uniquename":"PMID:29761456"}],"product":"peroxisomal importomer complex subunit Pex8","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0015630","GO:0060090","GO:0055085","GO:0072686","GO:0005816","GO:0005634","GO:0007031"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005737":null,"GO:0016558":null,"GO:0030674":null,"GO:0032153":null,"GO:0044732":null,"GO:0072686":null,"GO:1990429":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05315.1"],"transcripts_by_uniquename":{"SJAG_05315.1":null},"uniprot_identifier":"B6K5H2","uniquename":"SJAG_05315"}


id: SJAG_05316
data:
  {"cv_annotations":{"biological_process":[{"annotations":[92572],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[92569],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[92570],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[92571],"is_not":false,"summary":null,"term":"GO:0019773"}],"molecular_function":[{"annotations":[92573],"is_not":false,"summary":null,"term":"GO:0004175"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08777","GOA:B6K5H3","InterPro:IPR033812","InterPro:IPR029055","UniProtKB/TrEMBL:B6K5H3","InterPro:IPR023332","InterPro:IPR000426","EnsemblGenomes-Gn:SJAG_05316","InterPro:IPR001353"],"deletion_viability":"unknown","disordered_region_coords":[[100,105],[232,247]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rmp1","uniquename":"SJAG_03952"},{"uniquename":"SJAG_03951"},{"name":"uba5","uniquename":"SJAG_03950"},{"name":"mtq2","uniquename":"SJAG_03949"},{"uniquename":"SJAG_03948"},{"name":"pup2","uniquename":"SJAG_05316"},{"name":"pex8","uniquename":"SJAG_05315"},{"name":"pos5","uniquename":"SJAG_03946"},{"name":"phf2","uniquename":"SJAG_03945"},{"name":"rsc7","uniquename":"SJAG_03944"},{"name":"ole1","uniquename":"SJAG_03943"}],"genes_by_uniquename":{"HGNC:9534":null,"SJAG_05316":null,"SPAC323.02c":null,"YGR253C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.60.20.10","interpro_id":"IPR029055","interpro_name":"Nucleophile aminohydrolases, N-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":247,"score":0.0,"start":1}],"model":"5fmgE00","name":"Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00227","interpro_id":"IPR001353","interpro_name":"Proteasome, subunit alpha/beta","interpro_type":"Family","locations":[{"end":219,"score":0.0,"start":32}],"model":"PF00227","name":"Proteasome subunit"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10584","interpro_id":"IPR000426","interpro_name":"Proteasome alpha-subunit, N-terminal domain","interpro_type":"Domain","locations":[{"end":30,"score":3.6000000203095794e-10,"start":8}],"model":"PF10584","name":"Proteasome subunit A N-terminal signature"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00388","interpro_id":"IPR000426","interpro_name":"Proteasome alpha-subunit, N-terminal domain","interpro_type":"Domain","locations":[{"end":30,"score":0.0,"start":8}],"model":"PS00388","name":"Proteasome alpha-type subunits signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51475","interpro_id":"IPR023332","interpro_name":"Proteasome alpha-type subunit","interpro_type":"Family","locations":[{"end":239,"score":0.0,"start":23}],"model":"PS51475","name":"Proteasome alpha-type subunit profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11599","interpro_id":"IPR050115","interpro_name":"Proteasome subunit alpha","interpro_type":"Family","locations":[{"end":220,"score":0.0,"start":6}],"model":"PTHR11599:SF14","name":"PROTEASOME SUBUNIT ALPHA/BETA"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00948","interpro_id":"IPR000426","interpro_name":"Proteasome alpha-subunit, N-terminal domain","interpro_type":"Domain","locations":[{"end":30,"score":7.69999966565571e-11,"start":8}],"model":"SM00948","name":"Proteasome subunit A N-terminal signature Add an annotation"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56235","interpro_id":"IPR029055","interpro_name":"Nucleophile aminohydrolases, N-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":244,"score":0.0,"start":7}],"model":"0043424","name":"N-terminal nucleophile aminohydrolases (Ntn hydrolases)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd03753","interpro_id":"IPR033812","interpro_name":"Proteasome subunit alpha5","interpro_type":"Family","locations":[{"end":221,"score":0.0,"start":8}],"model":"cd03753","name":""}],"location":{"chromosome_name":"supercont5.2","end_pos":3423156,"start_pos":3422214,"strand":"reverse"},"name":"pup2","ortholog_annotations":[{"gene_uniquename":"SJAG_05316","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9534","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05316","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC323.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05316","ortholog_taxonid":4932,"ortholog_uniquename":"YGR253C","reference_uniquename":"PMID:29761456"}],"product":"20S proteasome complex subunit alpha 5, Pup2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0030163","GO:0005634","GO:0008233","GO:0005829","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004175":null,"GO:0005634":null,"GO:0005829":null,"GO:0019773":null,"GO:0043161":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05316.1"],"transcripts_by_uniquename":{"SJAG_05316.1":null},"uniprot_identifier":"B6K5H3","uniquename":"SJAG_05316"}


id: SJAG_05319
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105988],"is_not":false,"summary":null,"term":"GO:1990758"},{"annotations":[105989],"is_not":false,"summary":null,"term":"GO:1990976"},{"annotations":[105990],"is_not":false,"summary":null,"term":"GO:0051455"}],"cellular_component":[{"annotations":[105986],"is_not":false,"summary":null,"term":"GO:0042729"},{"annotations":[105987],"is_not":false,"summary":null,"term":"GO:0072686"}]},"dbxrefs":["InterPro:IPR013959","EnsemblGenomes-Gn:SJAG_05319","EnsemblGenomes-Tr:EEB08851","GOA:B6K5P7","UniProtKB/TrEMBL:B6K5P7"],"deletion_viability":"unknown","disordered_region_coords":[[1,4]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04027"},{"name":"git11","uniquename":"SJAG_04026"},{"name":"mnh1","uniquename":"SJAG_04025"},{"name":"vps36","uniquename":"SJAG_04024"},{"name":"vti1","uniquename":"SJAG_04023"},{"name":"dad4","uniquename":"SJAG_05319"},{"name":"ctf1","uniquename":"SJAG_04022"},{"name":"trs23","uniquename":"SJAG_04021"},{"name":"rpp1b","uniquename":"SJAG_04020"},{"name":"mrpl3","uniquename":"SJAG_04019"},{"name":"scp1","uniquename":"SJAG_04018"}],"genes_by_uniquename":{"SJAG_05319":null,"SPBC3B9.22c":null,"YDR320C-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08650","interpro_id":"IPR013959","interpro_name":"DASH complex subunit Dad4","interpro_type":"Family","locations":[{"end":70,"score":7.899999772273202e-27,"start":1}],"model":"PF08650","name":"DASH complex subunit Dad4"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28222","interpro_id":"IPR013959","interpro_name":"DASH complex subunit Dad4","interpro_type":"Family","locations":[{"end":71,"score":1.2000000038052922e-29,"start":1}],"model":"PTHR28222:SF1","name":"DASH COMPLEX SUBUNIT DAD4"}],"location":{"chromosome_name":"supercont5.2","end_pos":3273653,"start_pos":3273392,"strand":"reverse"},"name":"dad4","ortholog_annotations":[{"gene_uniquename":"SJAG_05319","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC3B9.22c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05319","ortholog_taxonid":4932,"ortholog_uniquename":"YDR320C-A","reference_uniquename":"PMID:29761456"}],"product":"DASH complex subunit Dad4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0140013","GO:0005634","GO:0000776","GO:0072686","GO:0000070","GO:0005694","GO:0015630"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0042729":null,"GO:0051455":null,"GO:0072686":null,"GO:1990758":null,"GO:1990976":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05319.1"],"transcripts_by_uniquename":{"SJAG_05319.1":null},"uniprot_identifier":"B6K5P7","uniquename":"SJAG_05319"}


id: SJAG_05320
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114144],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[114142],"is_not":false,"summary":null,"term":"GO:0005763"},{"annotations":[114143],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[114145],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR035987","EnsemblGenomes-Tr:EEB08919","UniProtKB/TrEMBL:B6K5W5","EnsemblGenomes-Gn:SJAG_05320","GOA:B6K5W5","InterPro:IPR000630"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04095"},{"name":"dar2","uniquename":"SJAG_04094"},{"name":"uri1","uniquename":"SJAG_04093"},{"name":"cbf11","uniquename":"SJAG_04092"},{"name":"tfx1","uniquename":"SJAG_04091"},{"name":"mrps8","uniquename":"SJAG_05320"},{"name":"swp1","uniquename":"SJAG_04090"},{"name":"kpa1","uniquename":"SJAG_04089"},{"name":"rpn2","uniquename":"SJAG_04088"},{"name":"dca7","uniquename":"SJAG_04087"},{"name":"spp41","uniquename":"SJAG_04086"}],"genes_by_uniquename":{"SJAG_05320":null,"SPCC736.10c":null,"YMR158W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.1370.30","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":83,"score":5.800000035804942e-9,"start":6}],"model":"1seiA01","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.1490.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":151,"score":5.099999741096928e-13,"start":84}],"model":"2vqeH02","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00410","interpro_id":"IPR000630","interpro_name":"Small ribosomal subunit protein uS8","interpro_type":"Family","locations":[{"end":151,"score":6.800000146300889e-11,"start":9}],"model":"PF00410","name":"Ribosomal protein S8"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR11758","interpro_id":"IPR000630","interpro_name":"Small ribosomal subunit protein uS8","interpro_type":"Family","locations":[{"end":150,"score":4.199999903420348e-9,"start":8}],"model":"PTHR11758:SF4","name":"40S RIBOSOMAL PROTEIN S15A"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56047","interpro_id":"IPR035987","interpro_name":"Small ribosomal subunit protein uS8 superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":151,"score":1.6999999839167118e-24,"start":7}],"model":"0038928","name":"Ribosomal protein S8"}],"location":{"chromosome_name":"supercont5.2","end_pos":3110736,"start_pos":3110278,"strand":"reverse"},"name":"mrps8","ortholog_annotations":[{"gene_uniquename":"SJAG_05320","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC736.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05320","ortholog_taxonid":4932,"ortholog_uniquename":"YMR158W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit S8","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005739","GO:0140053","GO:0005198"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005739":null,"GO:0005763":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05320.1"],"transcripts_by_uniquename":{"SJAG_05320.1":null},"uniprot_identifier":"B6K5W5","uniquename":"SJAG_05320"}


id: SJAG_05321
data:
  {"cv_annotations":{"biological_process":[{"annotations":[86891],"is_not":false,"summary":null,"term":"GO:0051382"},{"annotations":[86892],"is_not":false,"summary":null,"term":"GO:0000070"}],"cellular_component":[{"annotations":[86888],"is_not":false,"summary":null,"term":"GO:0061838"},{"annotations":[86889],"is_not":false,"summary":null,"term":"GO:0000776"},{"annotations":[86890],"is_not":false,"summary":null,"term":"GO:0005654"}]},"dbxrefs":["InterPro:IPR009072","EnsemblGenomes-Tr:EEB08930","GOA:B6K5X6","InterPro:IPR003958","UniProtKB/TrEMBL:B6K5X6","EnsemblGenomes-Gn:SJAG_05321"],"deletion_viability":"unknown","disordered_region_coords":[[53,61]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fas1","uniquename":"SJAG_04107"},{"name":"rpa12","uniquename":"SJAG_04106"},{"uniquename":"SJAG_04105"},{"name":"erm1","uniquename":"SJAG_04103"},{"name":"puf5","uniquename":"SJAG_05322"},{"name":"wip1","uniquename":"SJAG_05321"},{"name":"arc5","uniquename":"SJAG_04100"},{"name":"med20","uniquename":"SJAG_04099"},{"name":"ilv3","uniquename":"SJAG_04098"},{"name":"yaf9","uniquename":"SJAG_04097"},{"uniquename":"SJAG_04096"}],"genes_by_uniquename":{"HGNC:21488":null,"SJAG_05321":null,"SPAC17G8.15":null,"YDR374W-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.20.10","interpro_id":"IPR009072","interpro_name":"Histone-fold","interpro_type":"Homologous_superfamily","locations":[{"end":75,"score":3.399999892102777e-21,"start":3}],"model":"3b0dC00","name":"Histone, subunit A"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00808","interpro_id":"IPR003958","interpro_name":"Transcription factor CBF/NF-Y/archaeal histone domain","interpro_type":"Domain","locations":[{"end":65,"score":0.009999999776482582,"start":6}],"model":"PF00808","name":"Histone-like transcription factor (CBF/NF-Y) and archaeal histone"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR34832","interpro_id":"IPR052484","interpro_name":"Centromere Protein W/WIP1","interpro_type":"Family","locations":[{"end":75,"score":3.899999897680195e-14,"start":4}],"model":"PTHR34832:SF1","name":"CENTROMERE PROTEIN W"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF47113","interpro_id":"IPR009072","interpro_name":"Histone-fold","interpro_type":"Homologous_superfamily","locations":[{"end":65,"score":5.590000018429464e-9,"start":5}],"model":"0037328","name":"Histone-fold"}],"location":{"chromosome_name":"supercont5.2","end_pos":3089700,"start_pos":3089280,"strand":"forward"},"name":"wip1","ortholog_annotations":[{"gene_uniquename":"SJAG_05321","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21488","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05321","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17G8.15","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_05321","ortholog_taxonid":4932,"ortholog_uniquename":"YDR374W-A","reference_uniquename":"PMID:29761456"}],"product":"CENP-W ortholog","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005654","GO:0005694","GO:0065003","GO:0005634","GO:0000776","GO:0000070"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000070":null,"GO:0000776":null,"GO:0005654":null,"GO:0051382":null,"GO:0061838":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05321.1"],"transcripts_by_uniquename":{"SJAG_05321.1":null},"uniprot_identifier":"B6K5X6","uniquename":"SJAG_05321"}


id: SJAG_05322
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94168],"is_not":false,"summary":null,"term":"GO:0000288"}],"cellular_component":[{"annotations":[94167],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[94169],"is_not":false,"summary":null,"term":"GO:0003729"}]},"dbxrefs":["InterPro:IPR033712","EnsemblGenomes-Tr:EEB08931","InterPro:IPR016024","GOA:B6K5X7","InterPro:IPR001313","InterPro:IPR033133","UniProtKB/TrEMBL:B6K5X7","InterPro:IPR011989","EnsemblGenomes-Gn:SJAG_05322"],"deletion_viability":"unknown","disordered_region_coords":[[22,26],[47,48],[51,70],[116,121],[124,132],[134,137],[144,185],[190,198],[208,210],[220,240],[246,251],[275,305],[314,326],[328,329],[352,353],[359,377],[434,435],[464,465],[494,496],[501,547]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpf2","uniquename":"SJAG_04108"},{"name":"fas1","uniquename":"SJAG_04107"},{"name":"rpa12","uniquename":"SJAG_04106"},{"uniquename":"SJAG_04105"},{"name":"erm1","uniquename":"SJAG_04103"},{"name":"puf5","uniquename":"SJAG_05322"},{"name":"wip1","uniquename":"SJAG_05321"},{"name":"arc5","uniquename":"SJAG_04100"},{"name":"med20","uniquename":"SJAG_04099"},{"name":"ilv3","uniquename":"SJAG_04098"},{"name":"yaf9","uniquename":"SJAG_04097"}],"genes_by_uniquename":{"SJAG_05322":null,"SPAC4G8.03c":null,"YGL014W":null,"YGL178W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.10.10","interpro_id":"IPR011989","interpro_name":"Armadillo-like helical","interpro_type":"Homologous_superfamily","locations":[{"end":886,"score":0.0,"start":553}],"model":"3gvoA00","name":"Leucine-rich Repeat Variant"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00806","interpro_id":"IPR001313","interpro_name":"Pumilio RNA-binding repeat","interpro_type":"Repeat","locations":[{"end":599,"score":44.0,"start":570},{"end":636,"score":0.00004099999932805076,"start":605},{"end":670,"score":55.0,"start":643},{"end":708,"score":0.004999999888241291,"start":678},{"end":743,"score":5.599999894911889e-7,"start":714},{"end":780,"score":2.0999999046325684,"start":752},{"end":820,"score":0.0019000000320374966,"start":786},{"end":857,"score":4.199999809265137,"start":830}],"model":"PF00806","name":"Pumilio-family RNA binding repeat"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50302","interpro_id":"IPR001313","interpro_name":"Pumilio RNA-binding repeat","interpro_type":"Repeat","locations":[{"end":636,"score":0.0,"start":601},{"end":672,"score":0.0,"start":637},{"end":709,"score":0.0,"start":674},{"end":745,"score":0.0,"start":710},{"end":781,"score":0.0,"start":746},{"end":817,"score":0.0,"start":782},{"end":855,"score":0.0,"start":818}],"model":"PS50302","name":"Pumilio RNA-binding repeat profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50303","interpro_id":"IPR033133","interpro_name":"Pumilio homology domain","interpro_type":"Domain","locations":[{"end":881,"score":0.0,"start":539}],"model":"PS50303","name":"Pumilio homology domain (PUM-HD) profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12537","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":880,"score":0.0,"start":264}],"model":"PTHR12537:SF188","name":"RNA BINDING PROTEIN PUMILIO-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00025","interpro_id":"IPR001313","interpro_name":"Pumilio RNA-binding repeat","interpro_type":"Repeat","locations":[{"end":600,"score":3.5,"start":565},{"end":636,"score":8.600000001024455e-6,"start":601},{"end":672,"score":0.7200000286102295,"start":637},{"end":709,"score":3.3000000598804036e-7,"start":674},{"end":745,"score":0.0034000000450760126,"start":710},{"end":781,"score":0.00015999999595806003,"start":746},{"end":817,"score":0.0006000000284984708,"start":782},{"end":855,"score":0.0006799999973736703,"start":820}],"model":"SM00025","name":"Pumilio-like repeats"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF48371","interpro_id":"IPR016024","interpro_name":"Armadillo-type fold","interpro_type":"Homologous_superfamily","locations":[{"end":876,"score":0.0,"start":558}],"model":"0048121","name":"ARM repeat"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd07920","interpro_id":"IPR033712","interpro_name":"Pumilio, RNA binding domain","interpro_type":"Domain","locations":[{"end":877,"score":0.0,"start":559}],"model":"cd07920","name":"Pumilio-family RNA binding domain"}],"location":{"chromosome_name":"supercont5.2","end_pos":3088424,"start_pos":3085758,"strand":"forward"},"low_complexity_region_coords":[[2,13],[31,50],[434,449],[458,470]],"name":"puf5","ortholog_annotations":[{"gene_uniquename":"SJAG_05322","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4G8.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05322","ortholog_taxonid":4932,"ortholog_uniquename":"YGL014W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05322","ortholog_taxonid":4932,"ortholog_uniquename":"YGL178W","reference_uniquename":"PMID:29761456"}],"product":"cytoplasmic pumilio family RNA-binding protein Puf5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000288":null,"GO:0003729":null,"GO:0005737":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05322.1"],"transcripts_by_uniquename":{"SJAG_05322.1":null},"uniprot_identifier":"B6K5X7","uniquename":"SJAG_05322"}


id: SJAG_05323
data:
  {"cv_annotations":{"biological_process":[{"annotations":[113322],"is_not":false,"summary":null,"term":"GO:0006281"},{"annotations":[113323],"is_not":false,"summary":null,"term":"GO:0000724"},{"annotations":[113324],"is_not":false,"summary":null,"term":"GO:0007127"}],"cellular_component":[{"annotations":[113320],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[113321],"is_not":false,"summary":null,"term":"GO:0030915"}],"molecular_function":[{"annotations":[61903],"is_not":false,"summary":null,"term":"GO:0046872"},{"annotations":[113325],"is_not":false,"summary":null,"term":"GO:0061630"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08948","UniProtKB/TrEMBL:B6K5Z4","InterPro:IPR014857","InterPro:IPR036388","EnsemblGenomes-Gn:SJAG_05323","GOA:B6K5Z4","InterPro:IPR011513"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04124"},{"name":"ada1","uniquename":"SJAG_04123"},{"name":"tim11","uniquename":"SJAG_04122"},{"name":"cct4","uniquename":"SJAG_04121"},{"name":"nat2","uniquename":"SJAG_07016"},{"name":"nse1","uniquename":"SJAG_05323"},{"name":"gpi2","uniquename":"SJAG_04119"},{"name":"ski2","uniquename":"SJAG_04118"},{"name":"cwf5","uniquename":"SJAG_04117"},{"name":"coa4","uniquename":"SJAG_04116"},{"uniquename":"SJAG_06614"}],"genes_by_uniquename":{"HGNC:29897":null,"SJAG_05323":null,"SPCC550.05":null,"YLR007W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.10.10","interpro_id":"IPR036388","interpro_name":"Winged helix-like DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":175,"score":2.2000000594311203e-19,"start":77}],"model":"5hvqC02","name":"Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.90.1150.220","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":74,"score":2.7999999474559445e-7,"start":3}],"model":"5hvqC01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07574","interpro_id":"IPR011513","interpro_name":"Non-structural maintenance of chromosomes element 1","interpro_type":"Family","locations":[{"end":163,"score":1.29999999412783e-14,"start":10}],"model":"PF07574","name":"Nse1 non-SMC component of SMC5-6 complex"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR20973","interpro_id":"IPR011513","interpro_name":"Non-structural maintenance of chromosomes element 1","interpro_type":"Family","locations":[{"end":218,"score":0.0,"start":3}],"model":"PTHR20973:SF0","name":"NON-SMC ELEMENT 1-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57850","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":220,"score":0.0000746000005165115,"start":177}],"model":"0050087","name":"RING/U-box"}],"location":{"chromosome_name":"supercont5.2","end_pos":3040247,"start_pos":3039504,"strand":"reverse"},"name":"nse1","ortholog_annotations":[{"gene_uniquename":"SJAG_05323","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29897","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05323","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC550.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05323","ortholog_taxonid":4932,"ortholog_uniquename":"YLR007W","reference_uniquename":"PMID:29761456"}],"product":"Smc5-6 complex ubiquitin-protein ligase E3 subunit Nse1","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006310","GO:0006281","GO:0140096","GO:0019787","GO:0005634","GO:0140013","GO:0016746","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000724":null,"GO:0005634":null,"GO:0006281":null,"GO:0007127":null,"GO:0030915":null,"GO:0046872":null,"GO:0061630":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05323.1"],"transcripts_by_uniquename":{"SJAG_05323.1":null},"uniprot_identifier":"B6K5Z4","uniquename":"SJAG_05323"}


id: SJAG_05325
data:
  {"cv_annotations":{"biological_process":[{"annotations":[68230],"is_not":false,"summary":null,"term":"GO:1905039"},{"annotations":[98690],"is_not":false,"summary":null,"term":"GO:0001407"},{"annotations":[98693],"is_not":false,"summary":null,"term":"GO:0030643"}],"cellular_component":[{"annotations":[98687],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[78774],"is_not":false,"summary":null,"term":"GO:0046943"},{"annotations":[98696],"is_not":false,"summary":null,"term":"GO:0001406"}]},"dbxrefs":["InterPro:IPR020846","EnsemblGenomes-Gn:SJAG_05325","EnsemblGenomes-Tr:EEB08961","InterPro:IPR005828","InterPro:IPR036259","UniProtKB/TrEMBL:B6K607","GOA:B6K607"],"deletion_viability":"unknown","disordered_region_coords":[[1,23],[29,37],[39,44]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dsh1","uniquename":"SJAG_04141"},{"name":"cdc13","uniquename":"SJAG_04140"},{"name":"amt1","uniquename":"SJAG_04136"},{"uniquename":"SJAG_04135"},{"uniquename":"SJAG_04134"},{"uniquename":"SJAG_05325"},{"name":"naa30","uniquename":"SJAG_04131"},{"name":"dys1","uniquename":"SJAG_04130"},{"uniquename":"SJAG_04129"},{"uniquename":"SJAG_04128"},{"name":"stt3","uniquename":"SJAG_04127"}],"genes_by_uniquename":{"SJAG_05325":null,"SPBC1271.09":null,"YCR098C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1250.20","interpro_id":"IPR036259","interpro_name":"MFS transporter superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":499,"score":0.0,"start":69}],"model":"4j05A00","name":"MFS general substrate transporter like domains"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00083","interpro_id":"IPR005828","interpro_name":"Major facilitator, sugar transporter-like","interpro_type":"Family","locations":[{"end":276,"score":3.300000037447892e-18,"start":75},{"end":477,"score":2.300000005561742e-6,"start":282}],"model":"PF00083","name":"Sugar (and other) transporter"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50850","interpro_id":"IPR020846","interpro_name":"Major facilitator superfamily domain","interpro_type":"Domain","locations":[{"end":478,"score":0.0,"start":72}],"model":"PS50850","name":"Major facilitator superfamily (MFS) profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR23508","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":513,"score":0.0,"start":60}],"model":"PTHR23508:SF11","name":"CARBOXYLIC ACID TRANSPORTER PROTEIN HOMOLOG"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF103473","interpro_id":"IPR036259","interpro_name":"MFS transporter superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":478,"score":1.401298464324817e-44,"start":65}],"model":"0042501","name":"MFS general substrate transporter"}],"location":{"chromosome_name":"supercont5.2","end_pos":3016157,"start_pos":3014610,"strand":"reverse"},"low_complexity_region_coords":[[365,376],[430,444],[456,472]],"ortholog_annotations":[{"gene_uniquename":"SJAG_05325","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1271.09","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_05325","ortholog_taxonid":4932,"ortholog_uniquename":"YCR098C","reference_uniquename":"PMID:29761456"}],"product":"MFS transporter superfamily","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0022857","GO:0055085","GO:0005886","GO:0098771"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001406":null,"GO:0001407":null,"GO:0005886":null,"GO:0030643":null,"GO:0046943":null,"GO:1905039":null},"tm_domain_coords":[[73,95],[110,132],[141,163],[173,195],[208,230],[245,267],[292,314],[334,356],[363,385],[395,417],[424,446],[456,478]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05325.1"],"transcripts_by_uniquename":{"SJAG_05325.1":null},"uniprot_identifier":"B6K607","uniquename":"SJAG_05325"}


id: SJAG_05326
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108524],"is_not":false,"summary":null,"term":"GO:0006888"}],"cellular_component":[{"annotations":[108523],"is_not":false,"summary":null,"term":"GO:0005783"}]},"dbxrefs":["InterPro:IPR029704","EnsemblGenomes-Tr:EEB08993","EnsemblGenomes-Gn:SJAG_05326","UniProtKB/TrEMBL:B6K639"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"aim21","uniquename":"SJAG_04172"},{"uniquename":"SJAG_04171"},{"uniquename":"SJAG_04170"},{"name":"aph1","uniquename":"SJAG_04169"},{"name":"rps17a","uniquename":"SJAG_04168"},{"name":"new20","uniquename":"SJAG_05326"},{"name":"cta3","uniquename":"SJAG_04167"},{"name":"ibp1","uniquename":"SJAG_04166"},{"name":"its8","uniquename":"SJAG_04165"},{"name":"mrp21","uniquename":"SJAG_04164"},{"name":"usp107","uniquename":"SJAG_04163"}],"genes_by_uniquename":{"HGNC:26239":null,"SJAG_05326":null,"SPBC839.19":null},"has_protein_features":false,"location":{"chromosome_name":"supercont5.2","end_pos":2944371,"start_pos":2943852,"strand":"reverse"},"name":"new20","ortholog_annotations":[{"gene_uniquename":"SJAG_05326","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26239","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05326","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC839.19","reference_uniquename":"PMID:26896847"}],"product":"ER exit protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005783","GO:0016192"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0006888":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05326.1"],"transcripts_by_uniquename":{"SJAG_05326.1":null},"uniprot_identifier":"B6K639","uniquename":"SJAG_05326"}


id: SJAG_05327
data:
  {"cv_annotations":{"biological_process":[{"annotations":[111303],"is_not":false,"summary":null,"term":"GO:0006506"}],"cellular_component":[{"annotations":[111301],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[111302],"is_not":false,"summary":null,"term":"GO:0005789"}],"molecular_function":[{"annotations":[111304],"is_not":false,"summary":null,"term":"GO:0000026"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05327","InterPro:IPR039521","UniProtKB/TrEMBL:B6K695","GOA:B6K695","InterPro:IPR005599","EnsemblGenomes-Tr:EEB09050"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04228"},{"name":"eis1","uniquename":"SJAG_04227"},{"name":"sfk1","uniquename":"SJAG_04225"},{"name":"utp13","uniquename":"SJAG_04224"},{"name":"coq10","uniquename":"SJAG_04223"},{"name":"gpi10","uniquename":"SJAG_05327"},{"name":"dim1","uniquename":"SJAG_04222"},{"name":"snx12","uniquename":"SJAG_04221"},{"uniquename":"SJAG_04220"},{"name":"atg20","uniquename":"SJAG_04219"},{"name":"tim23","uniquename":"SJAG_04218"}],"genes_by_uniquename":{"HGNC:8959":null,"SJAG_05327":null,"SPCC16A11.06c":null,"YGL142C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03901","interpro_id":"IPR005599","interpro_name":"GPI mannosyltransferase","interpro_type":"Family","locations":[{"end":400,"score":0.0,"start":7}],"model":"PF03901","name":"Alg9-like mannosyltransferase family"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR22760","interpro_id":"IPR005599","interpro_name":"GPI mannosyltransferase","interpro_type":"Family","locations":[{"end":469,"score":0.0,"start":10}],"model":"PTHR22760:SF4","name":"GLYCOSYLTRANSFERASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":2832170,"start_pos":2830665,"strand":"forward"},"low_complexity_region_coords":[[171,182],[331,341]],"name":"gpi10","ortholog_annotations":[{"gene_uniquename":"SJAG_05327","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8959","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05327","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC16A11.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05327","ortholog_taxonid":4932,"ortholog_uniquename":"YGL142C","reference_uniquename":"PMID:29761456"}],"product":"pig-B","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016757","GO:0006629","GO:0005789","GO:0042158","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000026":null,"GO:0005783":null,"GO:0005789":null,"GO:0006506":null},"tm_domain_coords":[[113,132],[171,193],[213,235],[268,290],[316,333],[346,368]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05327.1"],"transcripts_by_uniquename":{"SJAG_05327.1":null},"uniprot_identifier":"B6K695","uniquename":"SJAG_05327"}


id: SJAG_05328
data:
  {"cv_annotations":{"biological_process":[{"annotations":[112150],"is_not":false,"summary":null,"term":"GO:0016973"}],"cellular_component":[{"annotations":[112149],"is_not":false,"summary":null,"term":"GO:0000445"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09109","InterPro:IPR001680","InterPro:IPR015943","InterPro:IPR019775","EnsemblGenomes-Gn:SJAG_05328","InterPro:IPR036322","InterPro:IPR013979","GOA:B6K6F5","InterPro:IPR017986","InterPro:IPR040132","UniProtKB/TrEMBL:B6K6F5"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"eap1","uniquename":"SJAG_04291"},{"name":"ump1","uniquename":"SJAG_04290"},{"name":"urb1","uniquename":"SJAG_04289"},{"name":"cab5","uniquename":"SJAG_04288"},{"name":"cds1","uniquename":"SJAG_04287"},{"name":"tho3","uniquename":"SJAG_05328"},{"name":"thc1","uniquename":"SJAG_04286"},{"name":"ism1","uniquename":"SJAG_04285"},{"name":"nup61","uniquename":"SJAG_04284"},{"name":"dom34","uniquename":"SJAG_04283"},{"uniquename":"SJAG_04282"}],"genes_by_uniquename":{"HGNC:19072":null,"SJAG_05328":null,"SPCC18B5.10c":null,"YNL253W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.130.10.10","interpro_id":"IPR015943","interpro_name":"WD40/YVTN repeat-like-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":172,"score":3.000000058624444e-25,"start":7},{"end":302,"score":1.7999999365670533e-23,"start":173}],"model":"4ozuA01","name":"YVTN repeat-like/Quinoprotein amine dehydrogenase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00400","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":52,"score":0.3400000035762787,"start":24},{"end":222,"score":0.12999999523162842,"start":185},{"end":262,"score":0.02199999988079071,"start":227}],"model":"PF00400","name":"WD domain, G-beta repeat"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08662","interpro_id":"IPR013979","interpro_name":"Translation initiation factor, beta propellor-like domain","interpro_type":"Domain","locations":[{"end":170,"score":0.9200000166893005,"start":70}],"model":"PF08662","name":"Eukaryotic translation initiation factor eIF2A"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50082","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":61,"score":0.0,"start":20},{"end":222,"score":0.0,"start":190},{"end":273,"score":0.0,"start":232}],"model":"PS50082","name":"Trp-Asp (WD) repeats profile"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50294","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":52,"score":0.0,"start":20},{"end":222,"score":0.0,"start":190}],"model":"PS50294","name":"Trp-Asp (WD) repeats circular profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR22839","interpro_id":"IPR040132","interpro_name":"TREX component Tex1/THOC3","interpro_type":"Family","locations":[{"end":298,"score":0.0,"start":6}],"model":"PTHR22839:SF0","name":"THO COMPLEX SUBUNIT 3 THO3"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00320","interpro_id":"IPR001680","interpro_name":"WD40 repeat","interpro_type":"Repeat","locations":[{"end":52,"score":0.010999999940395355,"start":8},{"end":98,"score":0.11999999731779099,"start":57},{"end":139,"score":1.0,"start":101},{"end":222,"score":0.000011000000085914508,"start":183},{"end":264,"score":0.003100000089034438,"start":225}],"model":"SM00320","name":"WD40 repeats"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50978","interpro_id":"IPR036322","interpro_name":"WD40-repeat-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":294,"score":0.0,"start":24}],"model":"0047024","name":"WD40 repeat-like"}],"location":{"chromosome_name":"supercont5.2","end_pos":2705469,"start_pos":2704227,"strand":"forward"},"name":"tho3","ortholog_annotations":[{"gene_uniquename":"SJAG_05328","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19072","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05328","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC18B5.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05328","ortholog_taxonid":4932,"ortholog_uniquename":"YNL253W","reference_uniquename":"PMID:29761456"}],"product":"THO complex subunit Tho3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006913","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000445":null,"GO:0016973":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05328.1"],"transcripts_by_uniquename":{"SJAG_05328.1":null},"uniprot_identifier":"B6K6F5","uniquename":"SJAG_05328"}


id: SJAG_05329
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97935],"is_not":false,"summary":null,"term":"GO:0031145"},{"annotations":[97936],"is_not":false,"summary":null,"term":"GO:0007091"},{"annotations":[97937],"is_not":false,"summary":null,"term":"GO:0051306"}],"cellular_component":[{"annotations":[97931],"is_not":false,"summary":null,"term":"GO:0005680"},{"annotations":[97932],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[97933],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[97934],"is_not":false,"summary":null,"term":"GO:0005721"}],"molecular_function":[{"annotations":[97938],"is_not":false,"summary":null,"term":"GO:0060090"},{"annotations":[97939],"is_not":false,"summary":null,"term":"GO:0070628"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K6I1","GOA:B6K6I1","EnsemblGenomes-Gn:SJAG_05329","EnsemblGenomes-Tr:EEB09135","InterPro:IPR011989","InterPro:IPR024990"],"deletion_viability":"unknown","disordered_region_coords":[[627,638],[640,643],[968,970]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ept1","uniquename":"SJAG_04319"},{"name":"sap114","uniquename":"SJAG_04318"},{"name":"crd1","uniquename":"SJAG_04317"},{"name":"ogm1","uniquename":"SJAG_04316"},{"name":"inp2","uniquename":"SJAG_04315"},{"name":"cut4","uniquename":"SJAG_05329"},{"name":"pka1","uniquename":"SJAG_04312"},{"name":"plg7","uniquename":"SJAG_04311"},{"name":"tho4","uniquename":"SJAG_04310"},{"name":"gid9","uniquename":"SJAG_04309"},{"name":"sda1","uniquename":"SJAG_04308"}],"genes_by_uniquename":{"HGNC:19988":null,"SJAG_05329":null,"SPBC106.09":null,"YNL172W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.25.10.10","interpro_id":"IPR011989","interpro_name":"Armadillo-like helical","interpro_type":"Homologous_superfamily","locations":[{"end":1003,"score":8.399999876173769e-30,"start":753}],"model":"5vgzU02","name":"Leucine-rich Repeat Variant"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12827","interpro_id":"IPR024990","interpro_name":"Anaphase-promoting complex subunit 1","interpro_type":"Family","locations":[{"end":1120,"score":0.0,"start":215}],"model":"PTHR12827:SF3","name":"MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER"}],"location":{"chromosome_name":"supercont5.2","end_pos":2650589,"start_pos":2646217,"strand":"forward"},"low_complexity_region_coords":[[813,827],[841,852],[892,902]],"name":"cut4","ortholog_annotations":[{"gene_uniquename":"SJAG_05329","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19988","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05329","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC106.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05329","ortholog_taxonid":4932,"ortholog_uniquename":"YNL172W","reference_uniquename":"PMID:29761456"}],"product":"anaphase-promoting complex platform subcomplex scaffold subunit Apc1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0000070","GO:0030163","GO:0044772","GO:0060090","GO:0005829","GO:0005634","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005680":null,"GO:0005721":null,"GO:0005829":null,"GO:0007091":null,"GO:0031145":null,"GO:0051306":null,"GO:0060090":null,"GO:0070628":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05329.1"],"transcripts_by_uniquename":{"SJAG_05329.1":null},"uniprot_identifier":"B6K6I1","uniquename":"SJAG_05329"}


id: SJAG_05330
data:
  {"cv_annotations":{"biological_process":[{"annotations":[89311],"is_not":false,"summary":null,"term":"GO:0046854"},{"annotations":[89312],"is_not":false,"summary":null,"term":"GO:0048015"}],"cellular_component":[{"annotations":[89308],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[89309],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[89310],"is_not":false,"summary":null,"term":"GO:0032588"}],"molecular_function":[{"annotations":[89313],"is_not":false,"summary":null,"term":"GO:0004430"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K6Q4","InterPro:IPR015433","InterPro:IPR011009","EnsemblGenomes-Gn:SJAG_05330","InterPro:IPR018936","InterPro:IPR036940","EnsemblGenomes-Tr:EEB09208","InterPro:IPR000403","GOA:B6K6Q4"],"deletion_viability":"unknown","disordered_region_coords":[[17,30],[64,82],[181,187]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"krp1","uniquename":"SJAG_04398"},{"name":"etp1","uniquename":"SJAG_04397"},{"name":"set3","uniquename":"SJAG_04396"},{"name":"rlp24","uniquename":"SJAG_04395"},{"name":"sck2","uniquename":"SJAG_04394"},{"name":"pik1","uniquename":"SJAG_05330"},{"name":"glo3","uniquename":"SJAG_04391"},{"uniquename":"SJAG_04390"},{"name":"snt1","uniquename":"SJAG_04389"},{"name":"hsf1","uniquename":"SJAG_04388"},{"name":"nda2","uniquename":"SJAG_04387"}],"genes_by_uniquename":{"HGNC:8984":null,"SJAG_05330":null,"SPAC22E12.16c":null,"YNL267W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.1070.11","interpro_id":"IPR036940","interpro_name":"Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":259,"score":7.700000156310133e-18,"start":191}],"model":"2x6hA03","name":"Phosphatidylinositol 3-/4-kinase, catalytic domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.1010.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":163,"score":1.8000000361756419e-13,"start":6}],"model":"4jpsA04","name":"Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00454","interpro_id":"IPR000403","interpro_name":"Phosphatidylinositol 3-/4-kinase, catalytic domain","interpro_type":"Domain","locations":[{"end":251,"score":2.799999911143463e-19,"start":110}],"model":"PF00454","name":"Phosphatidylinositol 3- and 4-kinase"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00915","interpro_id":"IPR018936","interpro_name":"Phosphatidylinositol 3/4-kinase, conserved site","interpro_type":"Conserved_site","locations":[{"end":127,"score":0.0,"start":113}],"model":"PS00915","name":"Phosphatidylinositol 3- and 4-kinases signature 1"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00916","interpro_id":"IPR018936","interpro_name":"Phosphatidylinositol 3/4-kinase, conserved site","interpro_type":"Conserved_site","locations":[{"end":244,"score":0.0,"start":224}],"model":"PS00916","name":"Phosphatidylinositol 3- and 4-kinases signature 2"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50290","interpro_id":"IPR000403","interpro_name":"Phosphatidylinositol 3-/4-kinase, catalytic domain","interpro_type":"Domain","locations":[{"end":288,"score":0.0,"start":88}],"model":"PS50290","name":"Phosphatidylinositol 3- and 4-kinases catalytic domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10048","interpro_id":"IPR015433","interpro_name":"Phosphatidylinositol kinase","interpro_type":"Family","locations":[{"end":277,"score":0.0,"start":76}],"model":"PTHR10048:SF22","name":"PHOSPHATIDYLINOSITOL KINASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00146","interpro_id":"IPR000403","interpro_name":"Phosphatidylinositol 3-/4-kinase, catalytic domain","interpro_type":"Domain","locations":[{"end":288,"score":8.20000012335953e-10,"start":110}],"model":"SM00146","name":"Phosphoinositide 3-kinase, catalytic domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56112","interpro_id":"IPR011009","interpro_name":"Protein kinase-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":251,"score":2.140000093052696e-34,"start":76}],"model":"0046494","name":"Protein kinase-like (PK-like)"}],"location":{"chromosome_name":"supercont5.2","end_pos":2486381,"start_pos":2485515,"strand":"reverse"},"low_complexity_region_coords":[[223,237]],"name":"pik1","ortholog_annotations":[{"gene_uniquename":"SJAG_05330","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8984","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05330","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC22E12.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05330","ortholog_taxonid":4932,"ortholog_uniquename":"YNL267W","reference_uniquename":"PMID:29761456"}],"product":"Golgi-specific 1-phosphatidylinositol 4-kinase, type III-beta Pik1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0016301","GO:0005794","GO:0006629","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004430":null,"GO:0005634":null,"GO:0005794":null,"GO:0032588":null,"GO:0046854":null,"GO:0048015":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05330.1"],"transcripts_by_uniquename":{"SJAG_05330.1":null},"uniprot_identifier":"B6K6Q4","uniquename":"SJAG_05330"}


id: SJAG_05331
data:
  {"cv_annotations":{"biological_process":[{"annotations":[89264],"is_not":false,"summary":null,"term":"GO:0042790"},{"annotations":[89265],"is_not":false,"summary":null,"term":"GO:0006361"}],"cellular_component":[{"annotations":[89261],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[89262],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[89263],"is_not":false,"summary":null,"term":"GO:0000500"}],"molecular_function":[{"annotations":[89266],"is_not":false,"summary":null,"term":"GO:0001165"},{"annotations":[89267],"is_not":false,"summary":null,"term":"GO:0001181"}]},"dbxrefs":["InterPro:IPR022793","EnsemblGenomes-Tr:EEB09215","EnsemblGenomes-Gn:SJAG_05331","GOA:B6K6R1","UniProtKB/TrEMBL:B6K6R1"],"deletion_viability":"unknown","disordered_region_coords":[[111,110],[97,98]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04404"},{"name":"ccs1","uniquename":"SJAG_04403"},{"name":"rer1","uniquename":"SJAG_04402"},{"uniquename":"SJAG_04401"},{"name":"rna1","uniquename":"SJAG_04400"},{"name":"rrn10","uniquename":"SJAG_05331"},{"uniquename":"SJAG_04399"},{"name":"krp1","uniquename":"SJAG_04398"},{"name":"etp1","uniquename":"SJAG_04397"},{"name":"set3","uniquename":"SJAG_04396"},{"name":"rlp24","uniquename":"SJAG_04395"}],"genes_by_uniquename":{"SJAG_05331":null,"SPAC22E12.08":null,"YBL025W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05234","interpro_id":"IPR022793","interpro_name":"RNA polymerase I-specific transcription initiation factor Rrn10","interpro_type":"Family","locations":[{"end":95,"score":1.400000004814217e-9,"start":30}],"model":"PF05234","name":"UAF complex subunit Rrn10"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR28054","interpro_id":"IPR022793","interpro_name":"RNA polymerase I-specific transcription initiation factor Rrn10","interpro_type":"Family","locations":[{"end":93,"score":5.699999933855837e-13,"start":33}],"model":"PTHR28054:SF1","name":"RNA POLYMERASE I-SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN10"}],"location":{"chromosome_name":"supercont5.2","end_pos":2470310,"start_pos":2469898,"strand":"forward"},"low_complexity_region_coords":[[99,110]],"name":"rrn10","ortholog_annotations":[{"gene_uniquename":"SJAG_05331","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC22E12.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05331","ortholog_taxonid":4932,"ortholog_uniquename":"YBL025W","reference_uniquename":"PMID:29761456"}],"product":"RNA polymerase I upstream activation factor complex subunit Rrn10","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006351","GO:0005634","GO:0140223","GO:0005829","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000500":null,"GO:0001165":null,"GO:0001181":null,"GO:0005634":null,"GO:0005829":null,"GO:0006361":null,"GO:0042790":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05331.1"],"transcripts_by_uniquename":{"SJAG_05331.1":null},"uniprot_identifier":"B6K6R1","uniquename":"SJAG_05331"}


id: SJAG_05332
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94404,115013],"is_not":false,"summary":null,"term":"GO:0002182"}],"cellular_component":[{"annotations":[115009],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[94400,115011],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[94402],"is_not":false,"summary":null,"term":"GO:1990904"}],"molecular_function":[{"annotations":[94406,115015],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[94408],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[94410],"is_not":false,"summary":null,"term":"GO:0043022"},{"annotations":[94412,115017],"is_not":false,"summary":null,"term":"GO:0003746"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09231","InterPro:IPR005225","EnsemblGenomes-Gn:SJAG_05332","InterPro:IPR020568","InterPro:IPR000640","InterPro:IPR005517","GOA:B6JXX7","InterPro:IPR035647","InterPro:IPR014721","UniProtKB/TrEMBL:B6JXX7","InterPro:IPR027417","InterPro:IPR004161","InterPro:IPR009000","InterPro:IPR031157","InterPro:IPR000795","InterPro:IPR041095"],"deletion_viability":"unknown","disordered_region_coords":[[15,16],[23,26],[54,63],[260,261],[571,575],[599,600]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"adn3","uniquename":"SJAG_04421"},{"name":"tfb6","uniquename":"SJAG_04420"},{"name":"psg2","uniquename":"SJAG_04419"},{"name":"tdp1","uniquename":"SJAG_04418"},{"name":"tcb2","uniquename":"SJAG_04417"},{"name":"eft2b","uniquename":"SJAG_05332"},{"name":"rpl35Ab","uniquename":"SJAG_04414"},{"name":"tcb1","uniquename":"SJAG_04413"},{"name":"bir1","uniquename":"SJAG_04412"},{"name":"cut15","uniquename":"SJAG_04411"},{"name":"hnt3","uniquename":"SJAG_04410"}],"genes_by_uniquename":{"HGNC:3214":null,"SJAG_05332":null,"SPAC513.01c":null,"SPCP31B10.07":null,"YDR385W":null,"YOR133W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.30.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":484,"score":0.0,"start":345}],"model":"1vx4404","name":"Translation factors"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.230.10","interpro_id":"IPR014721","interpro_name":"Small ribosomal subunit protein uS5 domain 2-type fold, subgroup","interpro_type":"Homologous_superfamily","locations":[{"end":721,"score":0.0,"start":568}],"model":"3b82A05","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.240","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":842,"score":9.299997518184513e-40,"start":722}],"model":"3b82A06","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.70.870","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":562,"score":4.0000000126843074e-28,"start":486}],"model":"3jcmH04","name":"Elongation Factor G (Translational Gtpase), domain 3"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":237,"score":0.0,"start":3}],"model":"1vx4401","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00009","interpro_id":"IPR000795","interpro_name":"Translational (tr)-type GTP-binding domain","interpro_type":"Domain","locations":[{"end":318,"score":0.0,"start":18}],"model":"PF00009","name":"Elongation factor Tu GTP binding domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00679","interpro_id":"IPR000640","interpro_name":"Elongation factor EFG, domain V-like","interpro_type":"Domain","locations":[{"end":810,"score":1.700000022048607e-16,"start":724}],"model":"PF00679","name":"Elongation factor G C-terminus"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03144","interpro_id":"IPR004161","interpro_name":"Translation elongation factor EFTu-like, domain 2","interpro_type":"Domain","locations":[{"end":467,"score":1.2000000104706032e-8,"start":395}],"model":"PF03144","name":"Elongation factor Tu domain 2"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03764","interpro_id":"IPR005517","interpro_name":"Translation elongation factor EFG/EF2, domain IV","interpro_type":"Domain","locations":[{"end":720,"score":8.799999777534584e-26,"start":605}],"model":"PF03764","name":"Elongation factor G, domain IV"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF14492","interpro_id":"IPR041095","interpro_name":"Elongation Factor G, domain II","interpro_type":"Domain","locations":[{"end":548,"score":8.199999790292622e-9,"start":487}],"model":"PF14492","name":"Elongation Factor G, domain III"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00315","interpro_id":"IPR000795","interpro_name":"Translational (tr)-type GTP-binding domain","interpro_type":"Domain","locations":[{"end":34,"score":1.60000000580399e-14,"start":21},{"end":73,"score":1.60000000580399e-14,"start":65},{"end":111,"score":1.60000000580399e-14,"start":101},{"end":128,"score":1.60000000580399e-14,"start":117},{"end":162,"score":1.60000000580399e-14,"start":153}],"model":"PR00315","name":""},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00301","interpro_id":"IPR031157","interpro_name":"Tr-type G domain, conserved site","interpro_type":"Conserved_site","locations":[{"end":73,"score":0.0,"start":58}],"model":"PS00301","name":"Translational (tr)-type guanine nucleotide-binding (G) domain signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51722","interpro_id":"IPR000795","interpro_name":"Translational (tr)-type GTP-binding domain","interpro_type":"Domain","locations":[{"end":346,"score":0.0,"start":17}],"model":"PS51722","name":"Translational (tr)-type guanine nucleotide-binding (G) domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR42908","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":838,"score":0.0,"start":5}],"model":"PTHR42908:SF10","name":"TRANSLATION ELONGATION FACTOR-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00838","interpro_id":"IPR000640","interpro_name":"Elongation factor EFG, domain V-like","interpro_type":"Domain","locations":[{"end":818,"score":4.000000067449534e-16,"start":723}],"model":"SM00838","name":"Elongation factor G C-terminus"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00889","interpro_id":"IPR005517","interpro_name":"Translation elongation factor EFG/EF2, domain IV","interpro_type":"Domain","locations":[{"end":721,"score":6.999999777858658e-20,"start":605}],"model":"SM00889","name":"Elongation factor G, domain IV"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50447","interpro_id":"IPR009000","interpro_name":"Translation protein, beta-barrel domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":481,"score":1.0799807264551365e-41,"start":345}],"model":"0048252","name":"Translation proteins"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":343,"score":0.0,"start":4}],"model":"0041170","name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54211","interpro_id":"IPR020568","interpro_name":"Ribosomal protein uS5 domain 2-type superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":724,"score":0.0,"start":561}],"model":"0041171","name":"Ribosomal protein S5 domain 2-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54980","interpro_id":"IPR035647","interpro_name":"EF-G domain III/V-like","interpro_type":"Homologous_superfamily","locations":[{"end":559,"score":1.6900000433039611e-19,"start":484},{"end":840,"score":8.6299999220421e-31,"start":726}],"model":"0048253","name":"EF-G C-terminal domain-like"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00231","interpro_id":"IPR005225","interpro_name":"Small GTP-binding protein domain","interpro_type":"Domain","locations":[{"end":164,"score":5.99999989471002e-14,"start":20}],"model":"TIGR00231","name":"small GTP-binding protein domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01681","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":730,"score":0.0,"start":558}],"model":"cd01681","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd01885","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":230,"score":0.0,"start":20}],"model":"cd01885","name":"Elongation Factor 2 (EF2) in archaea and eukarya"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd03700","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":472,"score":0.0,"start":378}],"model":"cd03700","name":"Domain II of elongation factor 2 and C-terminal domain of the spliceosomal human 116kD U5 small nuclear ribonucleoprotein (snRNP) protein"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd04096","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":805,"score":4.203895392974451e-45,"start":726}],"model":"cd04096","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd16261","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":558,"score":3.9206705525589765e-39,"start":487}],"model":"cd16261","name":"Domain III of Elongation Factor 2 (EF2)"}],"location":{"chromosome_name":"supercont5.2","end_pos":2442830,"start_pos":2440302,"strand":"forward"},"low_complexity_region_coords":[[485,495]],"name":"eft2b","ortholog_annotations":[{"gene_uniquename":"SJAG_05332","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3214","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05332","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC513.01c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_05332","ortholog_taxonid":4896,"ortholog_uniquename":"SPCP31B10.07","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_05332","ortholog_taxonid":4932,"ortholog_uniquename":"YDR385W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05332","ortholog_taxonid":4932,"ortholog_uniquename":"YOR133W","reference_uniquename":"PMID:29761456"}],"product":"translation elongation factor 2 (EF-2) Eft2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0002181","GO:0003924","GO:0045182"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002182":null,"GO:0003746":null,"GO:0003924":null,"GO:0005525":null,"GO:0005737":null,"GO:0005829":null,"GO:0043022":null,"GO:1990904":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05332.1"],"transcripts_by_uniquename":{"SJAG_05332.1":null},"uniprot_identifier":"B6JXX7","uniquename":"SJAG_05332"}


id: SJAG_05333
data:
  {"coiled_coil_coords":[[30,64],[80,107]],"cv_annotations":{"biological_process":[{"annotations":[107217],"is_not":false,"summary":null,"term":"GO:0010780"},{"annotations":[107218],"is_not":false,"summary":null,"term":"GO:0007131"}],"cellular_component":[{"annotations":[107213],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[107214],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107215],"is_not":false,"summary":null,"term":"GO:0030998"},{"annotations":[107216],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[107219],"is_not":false,"summary":null,"term":"GO:0031490"}]},"dbxrefs":["InterPro:IPR027267","EnsemblGenomes-Tr:EEB09337","UniProtKB/TrEMBL:B6K733","EnsemblGenomes-Gn:SJAG_05333"],"deletion_viability":"unknown","disordered_region_coords":[[1,4],[35,58],[95,96],[102,103],[108,117],[119,124]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pre4","uniquename":"SJAG_04541"},{"name":"ckn1","uniquename":"SJAG_04540"},{"name":"txl1","uniquename":"SJAG_04539"},{"name":"ubp10","uniquename":"SJAG_04538"},{"name":"stt4","uniquename":"SJAG_04537"},{"name":"rec27","uniquename":"SJAG_05333"},{"name":"tho5","uniquename":"SJAG_04536"},{"uniquename":"SJAG_04535"},{"name":"rpl38a","uniquename":"SJAG_04534"},{"name":"cym1","uniquename":"SJAG_04533"},{"uniquename":"SJAG_04532"}],"genes_by_uniquename":{"SJAG_05333":null,"SPBC577.05c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"SSF","evidence":"HMMPfam","id":"SSF103657","interpro_id":"IPR027267","interpro_name":"AH/BAR domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":97,"score":0.000048099998821271583,"start":21}],"model":"0050766","name":"BAR/IMD domain-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":673315,"start_pos":672794,"strand":"forward"},"low_complexity_region_coords":[[5,18],[29,29]],"name":"rec27","ortholog_annotations":[{"gene_uniquename":"SJAG_05333","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC577.05c","reference_uniquename":"PMID:21511999"}],"product":"meiotic recombination protein Rec27","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0005694","GO:0006310","GO:0005634","GO:0005829","GO:0140013"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0005634":null,"GO:0005829":null,"GO:0007131":null,"GO:0010780":null,"GO:0030998":null,"GO:0031490":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05333.1"],"transcripts_by_uniquename":{"SJAG_05333.1":null},"uniprot_identifier":"B6K733","uniquename":"SJAG_05333"}


id: SJAG_05334
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90804],"is_not":false,"summary":null,"term":"GO:0030488"},{"annotations":[90805],"is_not":false,"summary":null,"term":"GO:0031591"}],"cellular_component":[{"annotations":[90802],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[90803],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[90806],"is_not":false,"summary":null,"term":"GO:0008175"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K776","InterPro:IPR003827","InterPro:IPR036602","EnsemblGenomes-Gn:SJAG_05334","EnsemblGenomes-Tr:EEB09380"],"deletion_viability":"unknown","disordered_region_coords":[[19,20],[23,46],[97,120],[123,124],[190,194],[196,197],[200,204]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ysh1","uniquename":"SJAG_04587"},{"name":"pof8","uniquename":"SJAG_04586"},{"name":"loz1","uniquename":"SJAG_04584"},{"name":"ypf1","uniquename":"SJAG_04583"},{"name":"pop100","uniquename":"SJAG_04582"},{"name":"tyw3","uniquename":"SJAG_05334"},{"name":"mal2","uniquename":"SJAG_04581"},{"name":"isp7","uniquename":"SJAG_04580"},{"uniquename":"SJAG_04579"},{"name":"apq12","uniquename":"SJAG_04578"},{"name":"arg12","uniquename":"SJAG_04577"}],"genes_by_uniquename":{"HGNC:24757":null,"SJAG_05334":null,"SPAC25B8.15c":null,"YGL050W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.1960.10","interpro_id":"IPR036602","interpro_name":"tRNA wybutosine-synthesizing-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":213,"score":0.0,"start":14}],"model":"1tljB00","name":"tRNA wybutosine-synthesizing-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02676","interpro_id":"IPR003827","interpro_name":"tRNA wybutosine-synthesizing protein","interpro_type":"Domain","locations":[{"end":193,"score":0.0,"start":20}],"model":"PF02676","name":"Methyltransferase TYW3"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR48330","interpro_id":"IPR051039","interpro_name":"tRNA wybutosine-synthesizing protein 3","interpro_type":"Family","locations":[{"end":216,"score":0.0,"start":15}],"model":"PTHR48330:SF1","name":"TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 3"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF111278","interpro_id":"IPR036602","interpro_name":"tRNA wybutosine-synthesizing-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":188,"score":0.0,"start":17}],"model":"0044041","name":"SSo0622-like"}],"location":{"chromosome_name":"supercont5.3","end_pos":576981,"start_pos":576281,"strand":"forward"},"name":"tyw3","ortholog_annotations":[{"gene_uniquename":"SJAG_05334","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24757","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05334","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC25B8.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05334","ortholog_taxonid":4932,"ortholog_uniquename":"YGL050W","reference_uniquename":"PMID:29761456"}],"product":"tRNA wybutosine biosynthesis protein Tyw3","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005634","GO:0140098","GO:0006399","GO:0016741","GO:0140101","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0008175":null,"GO:0030488":null,"GO:0031591":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05334.1"],"transcripts_by_uniquename":{"SJAG_05334.1":null},"uniprot_identifier":"B6K776","uniquename":"SJAG_05334"}


id: SJAG_05335
data:
  {"coiled_coil_coords":[[315,350]],"cv_annotations":{"biological_process":[{"annotations":[100363],"is_not":false,"summary":null,"term":"GO:0007165"}],"cellular_component":[{"annotations":[100362],"is_not":false,"summary":null,"term":"GO:0005737"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05335","InterPro:IPR041807","UniProtKB/TrEMBL:B6K797","EnsemblGenomes-Tr:EEB09401"],"deletion_viability":"unknown","disordered_region_coords":[[1,53],[80,83],[106,149],[461,466],[315,314],[86,86],[169,169],[182,188],[211,280],[295,307],[351,350],[356,421],[438,443]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"yar1","uniquename":"SJAG_04611"},{"name":"nop8","uniquename":"SJAG_04610"},{"name":"apm1","uniquename":"SJAG_04609"},{"name":"fmo1","uniquename":"SJAG_04608"},{"name":"php4","uniquename":"SJAG_04607"},{"uniquename":"SJAG_05335"},{"name":"coa1","uniquename":"SJAG_04603"},{"name":"pac3","uniquename":"SJAG_04602"},{"name":"pab2","uniquename":"SJAG_04601"},{"name":"pub3","uniquename":"SJAG_04600"},{"name":"rix7","uniquename":"SJAG_04599"}],"genes_by_uniquename":{"HGNC:16476":null,"SJAG_05335":null,"SPBC16E9.02c":null,"YDR273W":null,"YOR042W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd14372","interpro_id":"IPR041807","interpro_name":"Cue5/Don1, CUE domain","interpro_type":"Domain","locations":[{"end":84,"score":3.719070102608298e-15,"start":21}],"model":"cd14372","name":"CUE domain found in yeast ubiquitin-binding protein CUE5 (Cue5p), donuts protein 1 (DON1p) and similar proteins"}],"location":{"chromosome_name":"supercont5.3","end_pos":530591,"start_pos":528785,"strand":"reverse"},"low_complexity_region_coords":[[87,105],[170,181],[189,210],[281,294],[308,314],[351,355],[422,437],[444,460]],"ortholog_annotations":[{"gene_uniquename":"SJAG_05335","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16476","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05335","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16E9.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05335","ortholog_taxonid":4932,"ortholog_uniquename":"YDR273W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05335","ortholog_taxonid":4932,"ortholog_uniquename":"YOR042W","reference_uniquename":"PMID:29761456"}],"product":"CUE domain protein, human TOLLIP ortholog","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005737":null,"GO:0007165":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05335.1"],"transcripts_by_uniquename":{"SJAG_05335.1":null},"uniprot_identifier":"B6K797","uniquename":"SJAG_05335"}


id: SJAG_05336
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB09409","GOA:B6K7A5","EnsemblGenomes-Gn:SJAG_05336","UniProtKB/TrEMBL:B6K7A5"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tca17","uniquename":"SJAG_04618"},{"uniquename":"SJAG_04617"},{"uniquename":"SJAG_04616"},{"name":"spo14","uniquename":"SJAG_04615"},{"name":"mcs2","uniquename":"SJAG_04614"},{"uniquename":"SJAG_05336"},{"name":"tra1","uniquename":"SJAG_04613"},{"name":"ubc7","uniquename":"SJAG_04612"},{"name":"yar1","uniquename":"SJAG_04611"},{"name":"nop8","uniquename":"SJAG_04610"},{"name":"apm1","uniquename":"SJAG_04609"}],"genes_by_uniquename":{"SJAG_05336":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.3","end_pos":505823,"start_pos":505277,"strand":"reverse"},"low_complexity_region_coords":[[53,58],[94,107]],"product":"dubious","taxonid":4897,"taxonomic_distribution":"other","tm_domain_coords":[[30,52],[57,79],[86,108]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05336.1"],"transcripts_by_uniquename":{"SJAG_05336.1":null},"uniprot_identifier":"B6K7A5","uniquename":"SJAG_05336"}


id: SJAG_05337
data:
  {"cv_annotations":{"biological_process":[{"annotations":[68632,114417],"is_not":false,"summary":null,"term":"GO:0006357"}],"cellular_component":[{"annotations":[114415],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[114416],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[114418],"is_not":false,"summary":null,"term":"GO:0000981"},{"annotations":[114419],"is_not":false,"summary":null,"term":"GO:0000978"},{"annotations":[114420],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["GOA:B6K7J4","InterPro:IPR036864","EnsemblGenomes-Tr:EEB09498","InterPro:IPR007219","InterPro:IPR001138","UniProtKB/TrEMBL:B6K7J4","EnsemblGenomes-Gn:SJAG_05337"],"deletion_viability":"unknown","disordered_region_coords":[[44,45],[48,77],[99,103],[118,121],[685,688]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"uck2","uniquename":"SJAG_04713"},{"name":"toe1","uniquename":"SJAG_04712"},{"name":"urg1","uniquename":"SJAG_04711"},{"name":"urg3","uniquename":"SJAG_04710"},{"name":"urg2","uniquename":"SJAG_04709"},{"uniquename":"SJAG_05337"},{"name":"tna1","uniquename":"SJAG_04706"},{"name":"med6","uniquename":"SJAG_04705"},{"name":"elp2","uniquename":"SJAG_04704"},{"name":"for3","uniquename":"SJAG_04703"},{"name":"ufe1","uniquename":"SJAG_04701"}],"genes_by_uniquename":{"SJAG_05337":null,"SPCC777.02":null,"YLR098C":null,"YOR337W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:4.10.240.10","interpro_id":"IPR036864","interpro_name":"Zn(2)-C6 fungal-type DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":58,"score":4.099999841855606e-6,"start":1}],"model":"1d66A00","name":"Zn(2)-C6 fungal-type DNA-binding domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04082","interpro_id":"IPR007219","interpro_name":"Transcription factor domain, fungi","interpro_type":"Domain","locations":[{"end":424,"score":3.899999837461447e-18,"start":190}],"model":"PF04082","name":"Fungal specific transcription factor domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00463","interpro_id":"IPR001138","interpro_name":"Zn(2)Cys(6) fungal-type DNA-binding domain","interpro_type":"Domain","locations":[{"end":37,"score":0.0,"start":7}],"model":"PS00463","name":"Zn(2)-C6 fungal-type DNA-binding domain signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50048","interpro_id":"IPR001138","interpro_name":"Zn(2)Cys(6) fungal-type DNA-binding domain","interpro_type":"Domain","locations":[{"end":39,"score":0.0,"start":7}],"model":"PS50048","name":"Zn(2)-C6 fungal-type DNA-binding domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR47338","interpro_id":"IPR050815","interpro_name":"Fungal Secondary Metabolite Biosynthesis Regulators","interpro_type":"Family","locations":[{"end":634,"score":0.0,"start":3}],"model":"PTHR47338:SF25","name":"ZN(II)2CYS6 TRANSCRIPTION FACTOR (EUROFUNG)-RELATED"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00066","interpro_id":"IPR001138","interpro_name":"Zn(2)Cys(6) fungal-type DNA-binding domain","interpro_type":"Domain","locations":[{"end":48,"score":0.00559999980032444,"start":2}],"model":"SM00066","name":"GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00906","interpro_id":"IPR007219","interpro_name":"Transcription factor domain, fungi","interpro_type":"Domain","locations":[{"end":356,"score":1.500000053056283e-7,"start":284}],"model":"SM00906","name":"Fungal specific transcription factor domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57701","interpro_id":"IPR036864","interpro_name":"Zn(2)-C6 fungal-type DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":47,"score":2.6200000320386607e-6,"start":3}],"model":"0045159","name":"Zn2/Cys6 DNA-binding domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00067","interpro_id":"IPR001138","interpro_name":"Zn(2)Cys(6) fungal-type DNA-binding domain","interpro_type":"Domain","locations":[{"end":40,"score":1.4145400406562203e-8,"start":3}],"model":"cd00067","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd12148","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":597,"score":1.7183800769368437e-39,"start":178}],"model":"cd12148","name":"fungal transcription factor regulatory middle homology region"}],"location":{"chromosome_name":"supercont5.3","end_pos":305911,"start_pos":303486,"strand":"forward"},"low_complexity_region_coords":[[104,121],[375,386],[653,665]],"ortholog_annotations":[{"gene_uniquename":"SJAG_05337","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC777.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05337","ortholog_taxonid":4932,"ortholog_uniquename":"YLR098C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05337","ortholog_taxonid":4932,"ortholog_uniquename":"YOR337W","reference_uniquename":"PMID:29761456"}],"product":"DNA-binding transcription factor","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0005634","GO:0006351","GO:0003700","GO:0006355"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000978":null,"GO:0000981":null,"GO:0005634":null,"GO:0005829":null,"GO:0006357":null,"GO:0008270":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05337.1"],"transcripts_by_uniquename":{"SJAG_05337.1":null},"uniprot_identifier":"B6K7J4","uniquename":"SJAG_05337"}


id: SJAG_05338
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91529],"is_not":false,"summary":null,"term":"GO:0110147"},{"annotations":[91530],"is_not":false,"summary":null,"term":"GO:0019627"}],"cellular_component":[{"annotations":[91527],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[91528],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[91531],"is_not":false,"summary":null,"term":"GO:0016151"}]},"dbxrefs":["GOA:B6K7P7","UniProtKB/TrEMBL:B6K7P7","EnsemblGenomes-Tr:EEB09551","InterPro:IPR038277","EnsemblGenomes-Gn:SJAG_05338","InterPro:IPR002639"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"red1","uniquename":"SJAG_04768"},{"name":"rrp17","uniquename":"SJAG_04767"},{"name":"rrn5","uniquename":"SJAG_04766"},{"name":"rga3","uniquename":"SJAG_04765"},{"name":"mug108","uniquename":"SJAG_04764"},{"name":"ure6","uniquename":"SJAG_05338"},{"name":"pex3","uniquename":"SJAG_04763"},{"name":"srs1","uniquename":"SJAG_04762"},{"uniquename":"SJAG_04761"},{"name":"hal4","uniquename":"SJAG_04760"},{"name":"fun14","uniquename":"SJAG_04759"}],"genes_by_uniquename":{"SJAG_05338":null,"SPAC29A4.13":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.4190.10","interpro_id":"IPR038277","interpro_name":"UreF domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":212,"score":4.203895392974451e-45,"start":3}],"model":"3cxnB00","name":"Urease accessory protein UreF"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01730","interpro_id":"IPR002639","interpro_name":"Urease accessory protein UreF","interpro_type":"Family","locations":[{"end":188,"score":5.599999925684503e-18,"start":40}],"model":"PF01730","name":"UreF"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF009467","interpro_id":"IPR002639","interpro_name":"Urease accessory protein UreF","interpro_type":"Family","locations":[{"end":234,"score":5.605193857299268e-45,"start":4}],"model":"PIRSF009467","name":"Urease accessory protein UreF"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR33620","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":234,"score":0.0,"start":3}],"model":"PTHR33620:SF1","name":"UREASE ACCESSORY PROTEIN F"}],"location":{"chromosome_name":"supercont5.3","end_pos":182366,"start_pos":181662,"strand":"forward"},"name":"ure6","ortholog_annotations":[{"gene_uniquename":"SJAG_05338","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC29A4.13","reference_uniquename":"PMID:21511999"}],"product":"urease accessory protein UreF","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"subset_termids":["GO:0071941","GO:0005730","GO:0005634","GO:0051604"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005730":null,"GO:0005737":null,"GO:0016151":null,"GO:0019627":null,"GO:0110147":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05338.1"],"transcripts_by_uniquename":{"SJAG_05338.1":null},"uniprot_identifier":"B6K7P7","uniquename":"SJAG_05338"}


id: SJAG_05339
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84321],"is_not":false,"summary":null,"term":"GO:0006384"}],"cellular_component":[{"annotations":[84319],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[84320],"is_not":false,"summary":null,"term":"GO:0000127"}],"molecular_function":[{"annotations":[84322],"is_not":false,"summary":null,"term":"GO:0000992"},{"annotations":[84323],"is_not":false,"summary":null,"term":"GO:0000995"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05339","InterPro:IPR019481","EnsemblGenomes-Tr:EEB09565","UniProtKB/TrEMBL:B6K7R1"],"deletion_viability":"unknown","disordered_region_coords":[[1,20],[76,82],[108,128],[208,209]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"srb6","uniquename":"SJAG_05341"},{"uniquename":"SJAG_04782"},{"name":"cam2","uniquename":"SJAG_04781"},{"name":"mug95","uniquename":"SJAG_04780"},{"name":"ubc14","uniquename":"SJAG_05340"},{"name":"sfc7","uniquename":"SJAG_05339"},{"name":"atl1","uniquename":"SJAG_04778"},{"name":"win1","uniquename":"SJAG_04777"},{"name":"etd1","uniquename":"SJAG_04776"},{"uniquename":"SJAG_04774"},{"name":"tif1","uniquename":"SJAG_04772"}],"genes_by_uniquename":{"HGNC:20872":null,"SJAG_05339":null,"SPAC1250.07":null,"YOR110W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.40.4370","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":146,"score":8.699999824884242e-24,"start":47}],"model":"4bjjB00","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10419","interpro_id":"IPR019481","interpro_name":"Transcription factor TFIIIC, triple barrel domain","interpro_type":"Domain","locations":[{"end":134,"score":9.399999889581068e-9,"start":63}],"model":"PF10419","name":"TFIIIC subunit triple barrel domain"}],"location":{"chromosome_name":"supercont5.3","end_pos":145808,"start_pos":145179,"strand":"forward"},"low_complexity_region_coords":[[181,195]],"name":"sfc7","ortholog_annotations":[{"gene_uniquename":"SJAG_05339","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20872","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05339","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1250.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05339","ortholog_taxonid":4932,"ortholog_uniquename":"YOR110W","reference_uniquename":"PMID:29761456"}],"product":"transcription factor TFIIIC subunit Sfc7","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006351","GO:0140223","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000127":null,"GO:0000992":null,"GO:0000995":null,"GO:0005634":null,"GO:0006384":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05339.1"],"transcripts_by_uniquename":{"SJAG_05339.1":null},"uniprot_identifier":"B6K7R1","uniquename":"SJAG_05339"}


id: SJAG_05340
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84303],"is_not":false,"summary":null,"term":"GO:0006511"}],"cellular_component":[{"annotations":[84302],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[84304],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[84305],"is_not":false,"summary":null,"term":"GO:0061631"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05340","InterPro:IPR023313","UniProtKB/TrEMBL:B6K7R2","InterPro:IPR000608","EnsemblGenomes-Tr:EEB09566","GOA:B6K7R2","InterPro:IPR016135"],"deletion_viability":"unknown","disordered_region_coords":[[1,11],[24,26]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"prp19","uniquename":"SJAG_04783"},{"name":"srb6","uniquename":"SJAG_05341"},{"uniquename":"SJAG_04782"},{"name":"cam2","uniquename":"SJAG_04781"},{"name":"mug95","uniquename":"SJAG_04780"},{"name":"ubc14","uniquename":"SJAG_05340"},{"name":"sfc7","uniquename":"SJAG_05339"},{"name":"atl1","uniquename":"SJAG_04778"},{"name":"win1","uniquename":"SJAG_04777"},{"name":"etd1","uniquename":"SJAG_04776"},{"uniquename":"SJAG_04774"}],"genes_by_uniquename":{"HGNC:12488":null,"HGNC:12490":null,"SJAG_05340":null,"SPAC1250.03":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.10.110.10","interpro_id":"IPR016135","interpro_name":"Ubiquitin-conjugating enzyme/RWD-like","interpro_type":"Homologous_superfamily","locations":[{"end":156,"score":0.0,"start":2}],"model":"4l83A00","name":"Ubiquitin Conjugating Enzyme"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00179","interpro_id":"IPR000608","interpro_name":"Ubiquitin-conjugating enzyme E2","interpro_type":"Domain","locations":[{"end":149,"score":5.700061763334058e-41,"start":12}],"model":"PF00179","name":"Ubiquitin-conjugating enzyme"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00183","interpro_id":"IPR023313","interpro_name":"Ubiquitin-conjugating enzyme, active site","interpro_type":"Active_site","locations":[{"end":96,"score":0.0,"start":81}],"model":"PS00183","name":"Ubiquitin-conjugating (UBC) active site signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50127","interpro_id":"IPR000608","interpro_name":"Ubiquitin-conjugating enzyme E2","interpro_type":"Domain","locations":[{"end":155,"score":0.0,"start":8}],"model":"PS50127","name":"Ubiquitin-conjugating (UBC) core domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR24067","interpro_id":"IPR050113","interpro_name":"Ubiquitin-conjugating enzyme","interpro_type":"Family","locations":[{"end":151,"score":2.7000000916546644e-34,"start":7}],"model":"PTHR24067:SF370","name":"UBIQUITIN-CONJUGATING ENZYME E2"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00212","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":155,"score":0.0,"start":11}],"model":"SM00212","name":"Ubiquitin-conjugating enzyme E2, catalytic domain homologues"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54495","interpro_id":"IPR016135","interpro_name":"Ubiquitin-conjugating enzyme/RWD-like","interpro_type":"Homologous_superfamily","locations":[{"end":154,"score":0.0,"start":4}],"model":"0054300","name":"UBC-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00195","interpro_id":"IPR000608","interpro_name":"Ubiquitin-conjugating enzyme E2","interpro_type":"Domain","locations":[{"end":150,"score":0.0,"start":10}],"model":"cd00195","name":""}],"location":{"chromosome_name":"supercont5.3","end_pos":145204,"start_pos":144493,"strand":"forward"},"low_complexity_region_coords":[[106,120]],"name":"ubc14","ortholog_annotations":[{"gene_uniquename":"SJAG_05340","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12488","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05340","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12490","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05340","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1250.03","reference_uniquename":"PMID:21511999"}],"product":"ubiquitin conjugating enzyme E2 for HECT-type and RBR family E3 Ub ligases, Ubc14","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0019787","GO:0005634","GO:0016746","GO:0140096","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005634":null,"GO:0006511":null,"GO:0061631":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05340.1"],"transcripts_by_uniquename":{"SJAG_05340.1":null},"uniprot_identifier":"B6K7R2","uniquename":"SJAG_05340"}


id: SJAG_05341
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91489],"is_not":false,"summary":null,"term":"GO:0060261"},{"annotations":[91490],"is_not":false,"summary":null,"term":"GO:0006367"}],"cellular_component":[{"annotations":[91487],"is_not":false,"summary":null,"term":"GO:0016592"},{"annotations":[91488],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[91491],"is_not":false,"summary":null,"term":"GO:0003713"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K7R6","EnsemblGenomes-Tr:EEB09570","EnsemblGenomes-Gn:SJAG_05341","GOA:B6K7R6","InterPro:IPR009332","InterPro:IPR038427"],"deletion_viability":"unknown","disordered_region_coords":[[16,17],[105,109],[111,112],[114,115],[135,139]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_04787"},{"uniquename":"SJAG_04786"},{"name":"psp3","uniquename":"SJAG_04785"},{"name":"asa1","uniquename":"SJAG_04784"},{"name":"prp19","uniquename":"SJAG_04783"},{"name":"srb6","uniquename":"SJAG_05341"},{"uniquename":"SJAG_04782"},{"name":"cam2","uniquename":"SJAG_04781"},{"name":"mug95","uniquename":"SJAG_04780"},{"name":"ubc14","uniquename":"SJAG_05340"},{"name":"sfc7","uniquename":"SJAG_05339"}],"genes_by_uniquename":{"HGNC:11477":null,"SJAG_05341":null,"SPAC29A4.07":null,"YBR253W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:6.10.280.160","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":101,"score":9.299999874201603e-6,"start":13}],"model":"3r84J00","name":"Mediator of RNA polymerase II transcription subunit 22"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF06179","interpro_id":"IPR009332","interpro_name":"Mediator of RNA polymerase II transcription subunit 22","interpro_type":"Family","locations":[{"end":124,"score":9.000000180878209e-13,"start":35}],"model":"PF06179","name":"Surfeit locus protein 5 subunit 22 of Mediator complex"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12434","interpro_id":"IPR009332","interpro_name":"Mediator of RNA polymerase II transcription subunit 22","interpro_type":"Family","locations":[{"end":125,"score":5.300000022190332e-11,"start":2}],"model":"PTHR12434:SF6","name":"MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 22"}],"location":{"chromosome_name":"supercont5.3","end_pos":141103,"start_pos":140684,"strand":"reverse"},"name":"srb6","ortholog_annotations":[{"gene_uniquename":"SJAG_05341","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11477","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05341","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC29A4.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05341","ortholog_taxonid":4932,"ortholog_uniquename":"YBR253W","reference_uniquename":"PMID:29761456"}],"product":"mediator complex subunit Med22","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006351","GO:0003712","GO:0060090","GO:0005634","GO:0003713","GO:0006355"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003713":null,"GO:0005634":null,"GO:0006367":null,"GO:0016592":null,"GO:0060261":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05341.1"],"transcripts_by_uniquename":{"SJAG_05341.1":null},"uniprot_identifier":"B6K7R6","uniquename":"SJAG_05341"}


id: SJAG_05342
data:
  {"cv_annotations":{"biological_process":[{"annotations":[99871],"is_not":false,"summary":null,"term":"GO:0003333"}],"cellular_component":[{"annotations":[99868],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[99869],"is_not":false,"summary":null,"term":"GO:0000324"},{"annotations":[99870],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[99872],"is_not":false,"summary":null,"term":"GO:0015171"},{"annotations":[99873],"is_not":false,"summary":null,"term":"GO:0140135"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05342","GOA:B6K7S8","InterPro:IPR004840","InterPro:IPR004841","InterPro:IPR002293","EnsemblGenomes-Tr:EEB09582","UniProtKB/TrEMBL:B6K7S8"],"deletion_viability":"unknown","disordered_region_coords":[[1,19],[22,23],[26,29],[31,33],[42,46],[56,63],[66,70]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pll5","uniquename":"SJAG_04801"},{"name":"gpp9","uniquename":"SJAG_04799"},{"name":"pll8","uniquename":"SJAG_04798"},{"name":"gpp12","uniquename":"SJAG_04797"},{"name":"pll13","uniquename":"SJAG_04796"},{"uniquename":"SJAG_05342"},{"name":"eaf7","uniquename":"SJAG_04793"},{"name":"ale1","uniquename":"SJAG_04792"},{"name":"eso1","uniquename":"SJAG_04791"},{"uniquename":"SJAG_04790"},{"name":"meu7","uniquename":"SJAG_04789"}],"genes_by_uniquename":{"HGNC:11057":null,"HGNC:11060":null,"HGNC:11061":null,"HGNC:11062":null,"HGNC:29326":null,"SJAG_05342":null,"SPBC1652.02":null,"YBR068C":null,"YBR069C":null,"YCL025C":null,"YDR046C":null,"YDR508C":null,"YGR191W":null,"YKR039W":null,"YNL268W":null,"YNL270C":null,"YOL020W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1740.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":550,"score":0.0,"start":101}],"model":"3giaA00","name":"Amino acid/polyamine transporter I"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00324","interpro_id":"IPR004841","interpro_name":"Amino acid permease/ SLC12A domain","interpro_type":"Domain","locations":[{"end":453,"score":0.0,"start":110}],"model":"PF00324","name":"Amino acid permease"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00218","interpro_id":"IPR004840","interpro_name":"Amino acid permease, conserved site","interpro_type":"Conserved_site","locations":[{"end":166,"score":0.0,"start":135}],"model":"PS00218","name":"Amino acid permeases signature"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR43341","interpro_id":"IPR050524","interpro_name":"Amino Acid-Polyamine-Organocation Superfamily YAT","interpro_type":"Family","locations":[{"end":566,"score":0.0,"start":76}],"model":"PTHR43341:SF1","name":"AMINO ACID PERMEASE"}],"location":{"chromosome_name":"supercont5.3","end_pos":119599,"start_pos":117831,"strand":"forward"},"low_complexity_region_coords":[[435,448],[543,544]],"ortholog_annotations":[{"gene_uniquename":"SJAG_05342","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11057","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05342","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11060","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05342","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11061","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05342","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11062","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05342","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29326","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05342","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1652.02","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_05342","ortholog_taxonid":4932,"ortholog_uniquename":"YBR068C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05342","ortholog_taxonid":4932,"ortholog_uniquename":"YBR069C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05342","ortholog_taxonid":4932,"ortholog_uniquename":"YCL025C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05342","ortholog_taxonid":4932,"ortholog_uniquename":"YDR046C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05342","ortholog_taxonid":4932,"ortholog_uniquename":"YDR508C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05342","ortholog_taxonid":4932,"ortholog_uniquename":"YGR191W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05342","ortholog_taxonid":4932,"ortholog_uniquename":"YKR039W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05342","ortholog_taxonid":4932,"ortholog_uniquename":"YNL268W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05342","ortholog_taxonid":4932,"ortholog_uniquename":"YNL270C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05342","ortholog_taxonid":4932,"ortholog_uniquename":"YOL020W","reference_uniquename":"PMID:29761456"}],"product":"APC amino acid transmembrane transporter","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0005783","GO:0005886","GO:0055085","GO:0022857","GO:0005773"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000324":null,"GO:0003333":null,"GO:0005783":null,"GO:0005886":null,"GO:0015171":null,"GO:0140135":null},"tm_domain_coords":[[110,127],[137,159],[188,210],[220,242],[249,271],[286,308],[334,356],[384,406],[435,452],[490,512],[524,546]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05342.1"],"transcripts_by_uniquename":{"SJAG_05342.1":null},"uniprot_identifier":"B6K7S8","uniquename":"SJAG_05342"}


id: SJAG_05343
data:
  {"cv_annotations":{"biological_process":[{"annotations":[69816],"is_not":false,"summary":null,"term":"GO:0045944"},{"annotations":[100547],"is_not":false,"summary":null,"term":"GO:0006357"}],"cellular_component":[{"annotations":[100545],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[100546],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[100548],"is_not":false,"summary":null,"term":"GO:0000981"},{"annotations":[100549],"is_not":false,"summary":null,"term":"GO:0000978"},{"annotations":[100550],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB09594","InterPro:IPR001138","GOA:B6K7U0","InterPro:IPR007219","InterPro:IPR036864","EnsemblGenomes-Gn:SJAG_05343","UniProtKB/TrEMBL:B6K7U0"],"deletion_viability":"unknown","disordered_region_coords":[[1,7],[83,104],[151,167],[174,184],[189,191],[574,612],[627,628],[630,631],[633,633],[649,659],[661,691],[693,696],[719,739],[821,830],[795,806]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bag101","uniquename":"SJAG_04817"},{"name":"top3","uniquename":"SJAG_04816"},{"name":"ptf2","uniquename":"SJAG_04815"},{"name":"rps3","uniquename":"SJAG_04814"},{"name":"fkh2","uniquename":"SJAG_04813"},{"name":"ntu1","uniquename":"SJAG_05343"},{"name":"erg24","uniquename":"SJAG_04810"},{"uniquename":"SJAG_04809"},{"name":"gpp2","uniquename":"SJAG_04808"},{"name":"gpp14","uniquename":"SJAG_04807"},{"name":"pll3","uniquename":"SJAG_06615"}],"genes_by_uniquename":{"SJAG_05343":null,"SPBC16G5.16":null,"YIL130W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:4.10.240.10","interpro_id":"IPR036864","interpro_name":"Zn(2)-C6 fungal-type DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":87,"score":5.799999872808698e-16,"start":16}],"model":"3coqA00","name":"Zn(2)-C6 fungal-type DNA-binding domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00172","interpro_id":"IPR001138","interpro_name":"Zn(2)Cys(6) fungal-type DNA-binding domain","interpro_type":"Domain","locations":[{"end":53,"score":4.2999999116943854e-9,"start":17}],"model":"PF00172","name":"Fungal Zn(2)-Cys(6) binuclear cluster domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04082","interpro_id":"IPR007219","interpro_name":"Transcription factor domain, fungi","interpro_type":"Domain","locations":[{"end":431,"score":1.399999953402364e-25,"start":210}],"model":"PF04082","name":"Fungal specific transcription factor domain"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00463","interpro_id":"IPR001138","interpro_name":"Zn(2)Cys(6) fungal-type DNA-binding domain","interpro_type":"Domain","locations":[{"end":45,"score":0.0,"start":18}],"model":"PS00463","name":"Zn(2)-C6 fungal-type DNA-binding domain signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50048","interpro_id":"IPR001138","interpro_name":"Zn(2)Cys(6) fungal-type DNA-binding domain","interpro_type":"Domain","locations":[{"end":47,"score":0.0,"start":18}],"model":"PS50048","name":"Zn(2)-C6 fungal-type DNA-binding domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR47540","interpro_id":"IPR051711","interpro_name":"Stress Response Regulator","interpro_type":"Family","locations":[{"end":776,"score":0.0,"start":3}],"model":"PTHR47540:SF2","name":"THIAMINE REPRESSIBLE GENES REGULATORY PROTEIN THI5"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00066","interpro_id":"IPR001138","interpro_name":"Zn(2)Cys(6) fungal-type DNA-binding domain","interpro_type":"Domain","locations":[{"end":56,"score":1.2000000467046398e-15,"start":13}],"model":"SM00066","name":"GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00906","interpro_id":"IPR007219","interpro_name":"Transcription factor domain, fungi","interpro_type":"Domain","locations":[{"end":383,"score":9.999999974752427e-7,"start":312}],"model":"SM00906","name":"Fungal specific transcription factor domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF57701","interpro_id":"IPR036864","interpro_name":"Zn(2)-C6 fungal-type DNA-binding domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":54,"score":1.1599999606703992e-11,"start":11}],"model":"0045159","name":"Zn2/Cys6 DNA-binding domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00067","interpro_id":"IPR001138","interpro_name":"Zn(2)Cys(6) fungal-type DNA-binding domain","interpro_type":"Domain","locations":[{"end":47,"score":1.2580200248223702e-14,"start":14}],"model":"cd00067","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd12148","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":551,"score":2.784649961660102e-31,"start":199}],"model":"cd12148","name":"fungal transcription factor regulatory middle homology region"}],"location":{"chromosome_name":"supercont5.3","end_pos":86897,"start_pos":84020,"strand":"forward"},"low_complexity_region_coords":[[296,310],[634,648],[777,794],[807,820]],"name":"ntu1","ortholog_annotations":[{"gene_uniquename":"SJAG_05343","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC16G5.16","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05343","ortholog_taxonid":4932,"ortholog_uniquename":"YIL130W","reference_uniquename":"PMID:29761456"}],"product":"DNA-binding transcription factor, zf-fungal binuclear cluster type","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0006355","GO:0006351","GO:0005829","GO:0003700","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000978":null,"GO:0000981":null,"GO:0005634":null,"GO:0005829":null,"GO:0006357":null,"GO:0008270":null,"GO:0045944":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05343.1"],"transcripts_by_uniquename":{"SJAG_05343.1":null},"uniprot_identifier":"B6K7U0","uniquename":"SJAG_05343"}


id: SJAG_05344
data:
  {"cv_annotations":{"biological_process":[{"annotations":[70321],"is_not":false,"summary":null,"term":"GO:0090110"},{"annotations":[58397],"is_not":false,"summary":null,"term":"GO:0006886"}],"cellular_component":[{"annotations":[70320],"is_not":false,"summary":null,"term":"GO:0030127"},{"annotations":[70319],"is_not":false,"summary":null,"term":"GO:0070971"}],"molecular_function":[{"annotations":[70318],"is_not":false,"summary":null,"term":"GO:0000149"},{"annotations":[70317],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05344","InterPro:IPR006895","InterPro:IPR006900","InterPro:IPR006896","InterPro:IPR036175","EnsemblGenomes-Tr:EEB09634","UniProtKB/TrEMBL:B6K7Y0","InterPro:IPR036465","GOA:B6K7Y0","InterPro:IPR029006","InterPro:IPR036174","InterPro:IPR036180"],"deletion_viability":"unknown","disordered_region_coords":[[8,17]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dug1","uniquename":"SJAG_04858"},{"name":"ubc16","uniquename":"SJAG_04857"},{"name":"slm5","uniquename":"SJAG_04856"},{"name":"reb1","uniquename":"SJAG_04855"},{"uniquename":"SJAG_05345"},{"uniquename":"SJAG_05344"},{"name":"mfr1","uniquename":"SJAG_04853"},{"name":"tfg2","uniquename":"SJAG_04852"},{"uniquename":"SJAG_04851"},{"name":"dfg501","uniquename":"SJAG_04850"},{"name":"guk1","uniquename":"SJAG_04849"}],"genes_by_uniquename":{"SJAG_05344":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.120.730","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":801,"score":0.0,"start":538}],"model":"2nutB01","name":"Sec23/Sec24 helical domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.30.380","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":200,"score":0.0,"start":137}],"model":"2nutB02","name":"Zn-finger domain of Sec23/24"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.40.1670","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":537,"score":0.0,"start":94}],"model":"2nutB03","name":"beta-sandwich domain of Sec23/24"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.20.10","interpro_id":"IPR029006","interpro_name":"ADF-H/Gelsolin-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":785,"score":0.0,"start":654}],"model":"2nutB05","name":"Severin"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.410","interpro_id":"IPR036465","interpro_name":"von Willebrand factor A-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":450,"score":0.0,"start":215}],"model":"2nutB04","name":"von Willebrand factor, type A domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04810","interpro_id":"IPR006895","interpro_name":"Zinc finger, Sec23/Sec24-type","interpro_type":"Domain","locations":[{"end":180,"score":0.00016999999934341758,"start":149}],"model":"PF04810","name":"Sec23/Sec24 zinc finger"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04811","interpro_id":"IPR006896","interpro_name":"Sec23/Sec24, trunk domain","interpro_type":"Domain","locations":[{"end":430,"score":3.7000001044777686e-13,"start":219}],"model":"PF04811","name":"Sec23/Sec24 trunk domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04815","interpro_id":"IPR006900","interpro_name":"Sec23/Sec24, helical domain","interpro_type":"Domain","locations":[{"end":622,"score":1.5999999547489097e-8,"start":549}],"model":"PF04815","name":"Sec23/Sec24 helical domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13803","interpro_id":"IPR050550","interpro_name":"SEC23/SEC24 family, SEC24 subfamily","interpro_type":"Family","locations":[{"end":808,"score":0.0,"start":70}],"model":"PTHR13803:SF4","name":"SEC24-RELATED PROTEIN"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53300","interpro_id":"IPR036465","interpro_name":"von Willebrand factor A-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":447,"score":7.000000080449598e-13,"start":218}],"model":"0040754","name":"vWA-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF81811","interpro_id":"IPR036175","interpro_name":"Sec23/Sec24 helical domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":653,"score":7.060000140057809e-9,"start":549}],"model":"0048071","name":"Helical domain of Sec23/24"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF81995","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":547,"score":1.9600000442099308e-11,"start":79}],"model":"0040753","name":"beta-sandwich domain of Sec23/24"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF82754","interpro_id":"IPR036180","interpro_name":"Gelsolin-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":803,"score":1.5399999497844874e-8,"start":654}],"model":"0040755","name":"C-terminal, gelsolin-like domain of Sec23/24"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF82919","interpro_id":"IPR036174","interpro_name":"Zinc finger, Sec23/Sec24-type superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":184,"score":1.0599999766824908e-9,"start":147}],"model":"0048072","name":"Zn-finger domain of Sec23/24"}],"location":{"chromosome_name":"supercont5.2","end_pos":2343808,"start_pos":2341240,"strand":"forward"},"low_complexity_region_coords":[[33,54],[281,292],[368,378]],"product":"zinc finger, Sec23/Sec24-type","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"subset_termids":["GO:0031410","GO:0016192","GO:0061024","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000149":null,"GO:0006886":null,"GO:0008270":null,"GO:0030127":null,"GO:0070971":null,"GO:0090110":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05344.1"],"transcripts_by_uniquename":{"SJAG_05344.1":null},"uniprot_identifier":"B6K7Y0","uniquename":"SJAG_05344"}


id: SJAG_05345
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74133],"is_not":false,"summary":null,"term":"GO:0090110"},{"annotations":[62817],"is_not":false,"summary":null,"term":"GO:0006886"}],"cellular_component":[{"annotations":[74132],"is_not":false,"summary":null,"term":"GO:0030127"},{"annotations":[74131],"is_not":false,"summary":null,"term":"GO:0070971"}],"molecular_function":[{"annotations":[74130],"is_not":false,"summary":null,"term":"GO:0000149"},{"annotations":[74129],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR012990","InterPro:IPR036175","EnsemblGenomes-Gn:SJAG_05345","EnsemblGenomes-Tr:EEB09635","InterPro:IPR029006","InterPro:IPR006896","GOA:B6K7Y1","InterPro:IPR006900","UniProtKB/TrEMBL:B6K7Y1","InterPro:IPR036174","InterPro:IPR036180","InterPro:IPR036465"],"deletion_viability":"unknown","disordered_region_coords":[[1,57]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ntp1","uniquename":"SJAG_04859"},{"name":"dug1","uniquename":"SJAG_04858"},{"name":"ubc16","uniquename":"SJAG_04857"},{"name":"slm5","uniquename":"SJAG_04856"},{"name":"reb1","uniquename":"SJAG_04855"},{"uniquename":"SJAG_05345"},{"uniquename":"SJAG_05344"},{"name":"mfr1","uniquename":"SJAG_04853"},{"name":"tfg2","uniquename":"SJAG_04852"},{"uniquename":"SJAG_04851"},{"name":"dfg501","uniquename":"SJAG_04850"}],"genes_by_uniquename":{"SJAG_05345":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.120.730","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":799,"score":0.0,"start":542}],"model":"2nutB01","name":"Sec23/Sec24 helical domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.30.30.380","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":196,"score":0.0,"start":134}],"model":"2nutB02","name":"Zn-finger domain of Sec23/24"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.60.40.1670","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":541,"score":0.0,"start":96}],"model":"2nutB03","name":"beta-sandwich domain of Sec23/24"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.20.10","interpro_id":"IPR029006","interpro_name":"ADF-H/Gelsolin-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":783,"score":0.0,"start":659}],"model":"2nutB05","name":"Severin"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.410","interpro_id":"IPR036465","interpro_name":"von Willebrand factor A-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":454,"score":0.0,"start":217}],"model":"2nutB04","name":"von Willebrand factor, type A domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04811","interpro_id":"IPR006896","interpro_name":"Sec23/Sec24, trunk domain","interpro_type":"Domain","locations":[{"end":448,"score":1.4000000323781614e-36,"start":216}],"model":"PF04811","name":"Sec23/Sec24 trunk domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04815","interpro_id":"IPR006900","interpro_name":"Sec23/Sec24, helical domain","interpro_type":"Domain","locations":[{"end":653,"score":1.199999960510567e-10,"start":568}],"model":"PF04815","name":"Sec23/Sec24 helical domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08033","interpro_id":"IPR012990","interpro_name":"Sec23/Sec24 beta-sandwich","interpro_type":"Domain","locations":[{"end":541,"score":5.700000027530905e-9,"start":460}],"model":"PF08033","name":"Sec23/Sec24 beta-sandwich domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13803","interpro_id":"IPR050550","interpro_name":"SEC23/SEC24 family, SEC24 subfamily","interpro_type":"Family","locations":[{"end":801,"score":0.0,"start":15}],"model":"PTHR13803:SF39","name":"SEC24-RELATED PROTEIN"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53300","interpro_id":"IPR036465","interpro_name":"von Willebrand factor A-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":449,"score":1.8199999994921365e-38,"start":217}],"model":"0040754","name":"vWA-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF81811","interpro_id":"IPR036175","interpro_name":"Sec23/Sec24 helical domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":658,"score":8.629999947660767e-16,"start":562}],"model":"0048071","name":"Helical domain of Sec23/24"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF81995","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":549,"score":7.460000276434539e-27,"start":26}],"model":"0040753","name":"beta-sandwich domain of Sec23/24"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF82754","interpro_id":"IPR036180","interpro_name":"Gelsolin-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":800,"score":3.3999999686784577e-6,"start":666}],"model":"0040755","name":"C-terminal, gelsolin-like domain of Sec23/24"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF82919","interpro_id":"IPR036174","interpro_name":"Zinc finger, Sec23/Sec24-type superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":202,"score":3.0100000270039118e-9,"start":132}],"model":"0048072","name":"Zn-finger domain of Sec23/24"}],"location":{"chromosome_name":"supercont5.2","end_pos":2341038,"start_pos":2338464,"strand":"forward"},"product":"zinc finger, Sec23/Sec24-type","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"subset_termids":["GO:0005783","GO:0031410","GO:0061024","GO:0016192"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000149":null,"GO:0006886":null,"GO:0008270":null,"GO:0030127":null,"GO:0070971":null,"GO:0090110":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05345.1"],"transcripts_by_uniquename":{"SJAG_05345.1":null},"uniprot_identifier":"B6K7Y1","uniquename":"SJAG_05345"}


id: SJAG_05346
data:
  {"cv_annotations":{"biological_process":[{"annotations":[94976],"is_not":false,"summary":null,"term":"GO:2000134"},{"annotations":[94977],"is_not":false,"summary":null,"term":"GO:1904262"},{"annotations":[94978],"is_not":false,"summary":null,"term":"GO:0010508"},{"annotations":[94979],"is_not":false,"summary":null,"term":"GO:1905589"},{"annotations":[94980],"is_not":false,"summary":null,"term":"GO:1905534"}],"cellular_component":[{"annotations":[94972],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[94973],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[94974],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[94975],"is_not":false,"summary":null,"term":"GO:0033596"}],"molecular_function":[{"annotations":[94981],"is_not":false,"summary":null,"term":"GO:0005096"}]},"dbxrefs":["InterPro:IPR024584","EnsemblGenomes-Gn:SJAG_05346","InterPro:IPR027107","InterPro:IPR018515","UniProtKB/TrEMBL:B6K849","GOA:B6K849","EnsemblGenomes-Tr:EEB09703","InterPro:IPR000331","InterPro:IPR035974"],"deletion_viability":"unknown","disordered_region_coords":[[633,638],[960,962],[1243,1249]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"apm3","uniquename":"SJAG_04931"},{"name":"efr3","uniquename":"SJAG_04930"},{"name":"sls1","uniquename":"SJAG_04929"},{"name":"tpp2","uniquename":"SJAG_04928"},{"uniquename":"SJAG_04927"},{"name":"tsc2","uniquename":"SJAG_05346"},{"name":"ted2","uniquename":"SJAG_04924"},{"name":"cwp1","uniquename":"SJAG_04923"},{"name":"spo3","uniquename":"SJAG_04922"},{"name":"tup12","uniquename":"SJAG_04921"},{"name":"gti1","uniquename":"SJAG_04920"}],"genes_by_uniquename":{"HGNC:12363":null,"SJAG_05346":null,"SPAC630.13c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.11210","interpro_id":"IPR035974","interpro_name":"Rap/Ran-GAP superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1212,"score":0.0,"start":1019}],"model":"1srqC02","name":"Rap/Ran-GAP"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02145","interpro_id":"IPR000331","interpro_name":"Rap/Ran-GAP domain","interpro_type":"Domain","locations":[{"end":1234,"score":0.0,"start":1040}],"model":"PF02145","name":"Rap/ran-GAP"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03542","interpro_id":"IPR018515","interpro_name":"Tuberin-type domain","interpro_type":"Domain","locations":[{"end":854,"score":1.1999999952050366e-11,"start":738}],"model":"PF03542","name":"Tuberin"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF11864","interpro_id":"IPR024584","interpro_name":"Tuberin, N-terminal","interpro_type":"Domain","locations":[{"end":485,"score":0.0,"start":33}],"model":"PF11864","name":"Domain of unknown function (DUF3384)"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50085","interpro_id":"IPR000331","interpro_name":"Rap/Ran-GAP domain","interpro_type":"Domain","locations":[{"end":1247,"score":0.0,"start":1011}],"model":"PS50085","name":"Rap GTPase activating proteins domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10063","interpro_id":"IPR027107","interpro_name":"Tuberin/Ral GTPase-activating protein subunit alpha","interpro_type":"Family","locations":[{"end":1259,"score":0.0,"start":956}],"model":"PTHR10063:SF0","name":"TUBERIN"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF111347","interpro_id":"IPR035974","interpro_name":"Rap/Ran-GAP superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":1244,"score":0.0,"start":932}],"model":"0043732","name":"Rap/Ran-GAP"}],"location":{"chromosome_name":"supercont5.2","end_pos":2208157,"start_pos":2204133,"strand":"forward"},"low_complexity_region_coords":[[525,538],[599,615]],"name":"tsc2","ortholog_annotations":[{"gene_uniquename":"SJAG_05346","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12363","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05346","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC630.13c","reference_uniquename":"PMID:21511999"}],"product":"Rheb GAP, tuberin Tsc2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0055085","GO:0023052","GO:0005634","GO:0030234","GO:0006914","GO:0005829","GO:0044772","GO:0098772"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005096":null,"GO:0005634":null,"GO:0005737":null,"GO:0005829":null,"GO:0010508":null,"GO:0033596":null,"GO:1904262":null,"GO:1905534":null,"GO:1905589":null,"GO:2000134":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05346.1"],"transcripts_by_uniquename":{"SJAG_05346.1":null},"uniprot_identifier":"B6K849","uniquename":"SJAG_05346"}


id: SJAG_05347
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05347","UniProtKB/TrEMBL:B6K858","EnsemblGenomes-Tr:EEB09712"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nit1","uniquename":"SJAG_04939"},{"name":"gyp10","uniquename":"SJAG_04938"},{"uniquename":"SJAG_04937"},{"name":"dot2","uniquename":"SJAG_04936"},{"name":"mug166","uniquename":"SJAG_04935"},{"uniquename":"SJAG_05347"},{"name":"rpc1","uniquename":"SJAG_04934"},{"name":"prf1","uniquename":"SJAG_04933"},{"name":"nse5","uniquename":"SJAG_04932"},{"name":"apm3","uniquename":"SJAG_04931"},{"name":"efr3","uniquename":"SJAG_04930"}],"genes_by_uniquename":{"SJAG_05347":null,"SPBC651.07":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.2","end_pos":2179462,"start_pos":2178518,"strand":"forward"},"low_complexity_region_coords":[[173,182]],"ortholog_annotations":[{"gene_uniquename":"SJAG_05347","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC651.07","reference_uniquename":"PMID:21511999"}],"product":"Schizosaccharomyces specific protein","references_by_uniquename":{"PMID:21511999":null},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_05347.1"],"transcripts_by_uniquename":{"SJAG_05347.1":null},"uniprot_identifier":"B6K858","uniquename":"SJAG_05347"}


id: SJAG_05348
data:
  {"cv_annotations":{"biological_process":[{"annotations":[96128],"is_not":false,"summary":null,"term":"GO:0006486"}],"cellular_component":[{"annotations":[96126],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[96127],"is_not":false,"summary":null,"term":"GO:0008250"}]},"dbxrefs":["GOA:B6K875","EnsemblGenomes-Tr:EEB09729","UniProtKB/TrEMBL:B6K875","EnsemblGenomes-Gn:SJAG_05348","InterPro:IPR036330","InterPro:IPR018943"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ppr10","uniquename":"SJAG_04959"},{"uniquename":"SJAG_04957"},{"name":"sec39","uniquename":"SJAG_04956"},{"name":"vma13","uniquename":"SJAG_04955"},{"name":"dfg10","uniquename":"SJAG_04954"},{"name":"ost4","uniquename":"SJAG_05348"},{"name":"trx1","uniquename":"SJAG_04953"},{"name":"alg3","uniquename":"SJAG_04952"},{"name":"meu13","uniquename":"SJAG_04950"},{"uniquename":"SJAG_04949"},{"name":"csn3","uniquename":"SJAG_04948"}],"genes_by_uniquename":{"HGNC:32483":null,"SJAG_05348":null,"SPAC7D4.15c":null,"YDL232W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF10215","interpro_id":"IPR018943","interpro_name":"Oligosaccaryltransferase","interpro_type":"Family","locations":[{"end":28,"score":3.799999959142042e-8,"start":1}],"model":"PF10215","name":"Oligosaccaryltransferase"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF103464","interpro_id":"IPR036330","interpro_name":"Oligosaccharyltransferase subunit ost4p superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":31,"score":4.710000167662542e-10,"start":1}],"model":"0043282","name":"Oligosaccharyltransferase subunit ost4p"}],"location":{"chromosome_name":"supercont5.2","end_pos":2146424,"start_pos":2146323,"strand":"reverse"},"name":"ost4","ortholog_annotations":[{"gene_uniquename":"SJAG_05348","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:32483","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05348","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC7D4.15c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05348","ortholog_taxonid":4932,"ortholog_uniquename":"YDL232W","reference_uniquename":"PMID:29761456"}],"product":"oligosaccharyltransferase complex subunit, Ost4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005783","GO:0005789","GO:0006486"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0006486":null,"GO:0008250":null},"tm_domain_coords":[[10,29]],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05348.1"],"transcripts_by_uniquename":{"SJAG_05348.1":null},"uniprot_identifier":"B6K875","uniquename":"SJAG_05348"}


id: SJAG_05349
data:
  {"cv_annotations":{"biological_process":[{"annotations":[93786],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[93787],"is_not":false,"summary":null,"term":"GO:0000398"}],"cellular_component":[{"annotations":[93784],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[93785],"is_not":false,"summary":null,"term":"GO:0005684"}]},"dbxrefs":["InterPro:IPR013170","UniProtKB/TrEMBL:B6K894","EnsemblGenomes-Gn:SJAG_05349","EnsemblGenomes-Tr:EEB09748"],"deletion_viability":"unknown","disordered_region_coords":[[1,26],[31,51],[58,59],[62,73],[75,76],[78,80],[96,130],[169,188]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tlg2","uniquename":"SJAG_04978"},{"name":"taf3","uniquename":"SJAG_04977"},{"uniquename":"SJAG_04976"},{"name":"pga3","uniquename":"SJAG_04975"},{"name":"rrp3","uniquename":"SJAG_04974"},{"name":"cwf21","uniquename":"SJAG_05349"},{"name":"rog1","uniquename":"SJAG_04973"},{"name":"fas2","uniquename":"SJAG_04972"},{"uniquename":"SJAG_06546"},{"name":"mus7","uniquename":"SJAG_04971"},{"uniquename":"SJAG_04970"}],"genes_by_uniquename":{"HGNC:16639":null,"SJAG_05349":null,"SPAC4A8.09c":null,"YDR482C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:6.10.140.420","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":96,"score":1.0000000116860974e-7,"start":51}],"model":"2e62A01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF08312","interpro_id":"IPR013170","interpro_name":"mRNA splicing factor Cwf21 domain","interpro_type":"Domain","locations":[{"end":94,"score":3.4000000592726565e-9,"start":53}],"model":"PF08312","name":"cwf21 domain"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR36562","interpro_id":"IPR051372","interpro_name":"Pre-mRNA-splicing factor CWC21","interpro_type":"Family","locations":[{"end":109,"score":1.199999961918627e-19,"start":3}],"model":"PTHR36562","name":"SERINE/ARGININE REPETITIVE MATRIX 2"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01115","interpro_id":"IPR013170","interpro_name":"mRNA splicing factor Cwf21 domain","interpro_type":"Domain","locations":[{"end":97,"score":1.3000000365082087e-7,"start":52}],"model":"SM01115","name":""},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd21372","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":95,"score":3.0555899065316805e-13,"start":48}],"model":"cd21372","name":"cwf21 domain found in fungal complexed with CEF1 protein 21 (CWC21) and similar proteins"}],"location":{"chromosome_name":"supercont5.2","end_pos":2100662,"start_pos":2100042,"strand":"reverse"},"low_complexity_region_coords":[[131,156]],"name":"cwf21","ortholog_annotations":[{"gene_uniquename":"SJAG_05349","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16639","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05349","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4A8.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_05349","ortholog_taxonid":4932,"ortholog_uniquename":"YDR482C","reference_uniquename":"PMID:29761456"}],"product":"complexed with Cdc5 protein Cwf21","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0016071","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000398":null,"GO:0005634":null,"GO:0005684":null,"GO:0045292":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05349.1"],"transcripts_by_uniquename":{"SJAG_05349.1":null},"uniprot_identifier":"B6K894","uniquename":"SJAG_05349"}


id: SJAG_05351
data:
  {"cv_annotations":{"biological_process":[{"annotations":[96337],"is_not":false,"summary":null,"term":"GO:0016485"}],"cellular_component":[{"annotations":[96336],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[96338],"is_not":false,"summary":null,"term":"GO:0004298"}]},"dbxrefs":["InterPro:IPR037464","InterPro:IPR000246","EnsemblGenomes-Tr:EEB09762","GOA:B6K8A8","UniProtKB/TrEMBL:B6K8A8","InterPro:IPR029055","EnsemblGenomes-Gn:SJAG_05351"],"deletion_viability":"unknown","disordered_region_coords":[[261,262]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ies2","uniquename":"SJAG_04989"},{"uniquename":"SJAG_04988"},{"name":"gon7","uniquename":"SJAG_06560"},{"name":"bit2","uniquename":"SJAG_04987"},{"name":"sgp1","uniquename":"SJAG_04986"},{"uniquename":"SJAG_05351"},{"uniquename":"SJAG_04985"},{"name":"hem25","uniquename":"SJAG_04984"},{"uniquename":"SJAG_04983"},{"name":"cdc3","uniquename":"SJAG_04982"},{"name":"tif303","uniquename":"SJAG_04981"}],"genes_by_uniquename":{"HGNC:15859":null,"SJAG_05351":null,"SPAC823.09c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.60.20.30","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":333,"score":3.0000000565330046e-31,"start":175}],"model":"1k2xB00","name":"(Glycosyl)asparaginase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01112","interpro_id":"IPR000246","interpro_name":"Peptidase T2, asparaginase 2","interpro_type":"Family","locations":[{"end":252,"score":4.800007759698228e-41,"start":6}],"model":"PF01112","name":"Asparaginase"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10188","interpro_id":"IPR000246","interpro_name":"Peptidase T2, asparaginase 2","interpro_type":"Family","locations":[{"end":324,"score":0.0,"start":4}],"model":"PTHR10188:SF8","name":"L-ASPARAGINASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56235","interpro_id":"IPR029055","interpro_name":"Nucleophile aminohydrolases, N-terminal","interpro_type":"Homologous_superfamily","locations":[{"end":323,"score":0.0,"start":5}],"model":"0045668","name":"N-terminal nucleophile aminohydrolases (Ntn hydrolases)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd04514","interpro_id":"IPR037464","interpro_name":"Threonine aspartase 1","interpro_type":"Family","locations":[{"end":333,"score":0.0,"start":4}],"model":"cd04514","name":"Taspase 1 (threonine aspartase 1) and similar proteins"}],"location":{"chromosome_name":"supercont5.2","end_pos":2076212,"start_pos":2075043,"strand":"reverse"},"low_complexity_region_coords":[[248,262]],"ortholog_annotations":[{"gene_uniquename":"SJAG_05351","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15859","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05351","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC823.09c","reference_uniquename":"PMID:21511999"}],"product":"threonine aspartase, involved in protein processing","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"subset_termids":["GO:0005829","GO:0051604","GO:0140096","GO:0008233"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004298":null,"GO:0005829":null,"GO:0016485":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05351.1"],"transcripts_by_uniquename":{"SJAG_05351.1":null},"uniprot_identifier":"B6K8A8","uniquename":"SJAG_05351"}


id: SJAG_05352
data:
  {"cv_annotations":{},"dbxrefs":["UniProtKB/TrEMBL:B6K8F6","EnsemblGenomes-Tr:EEB04996","EnsemblGenomes-Gn:SJAG_05352"],"deletion_viability":"unknown","disordered_region_coords":[[1,23],[258,276],[278,279]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_06638"},{"uniquename":"SJAG_06639"},{"uniquename":"SJAG_05143"},{"uniquename":"SJAG_05352"},{"uniquename":"SJAG_05050"}],"genes_by_uniquename":{"SJAG_05352":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.5","end_pos":48865,"start_pos":47517,"strand":"reverse"},"low_complexity_region_coords":[[29,50],[118,129]],"product":"transposon fragment","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_05352.1"],"transcripts_by_uniquename":{"SJAG_05352.1":null},"uniprot_identifier":"B6K8F6","uniquename":"SJAG_05352"}


id: SJAG_05353
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109039],"is_not":false,"summary":null,"term":"GO:0006281"},{"annotations":[109044],"is_not":false,"summary":null,"term":"GO:0000722"}],"cellular_component":[{"annotations":[109024],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[109029],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[109034],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[109049],"is_not":false,"summary":null,"term":"GO:0043138"},{"annotations":[109054],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[109059],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[109064],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["GOA:B6K8G0","InterPro:IPR001650","InterPro:IPR027417","EnsemblGenomes-Gn:SJAG_05353","EnsemblGenomes-Tr:EEB05003","UniProtKB/TrEMBL:B6K8G0"],"deletion_viability":"unknown","disordered_region_coords":[[256,259],[262,263],[292,293],[340,377],[402,403],[551,553],[296,323]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00019"},{"uniquename":"SJAG_00018"},{"uniquename":"SJAG_00016"},{"uniquename":"SJAG_00015"},{"uniquename":"SJAG_05354"},{"uniquename":"SJAG_05353"},{"uniquename":"SJAG_00013"},{"uniquename":"SJAG_00012"},{"uniquename":"SJAG_00007"},{"uniquename":"SJAG_00006"},{"uniquename":"SJAG_05358"}],"genes_by_uniquename":{"SJAG_05353":null,"SPAC212.06c":null,"SPBCPT2R1.08c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.300","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":246,"score":1.6999999301591922e-33,"start":46}],"model":"4o3mA02","name":"P-loop containing nucleotide triphosphate hydrolases"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00271","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal domain-like","interpro_type":"Domain","locations":[{"end":179,"score":4.500000198859322e-12,"start":76}],"model":"PF00271","name":"Helicase conserved C-terminal domain"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS51194","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal domain-like","interpro_type":"Domain","locations":[{"end":227,"score":0.0,"start":68}],"model":"PS51194","name":"Superfamilies 1 and 2 helicase C-terminal domain profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13710","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":317,"score":3.70000247818789e-40,"start":8}],"model":"PTHR13710:SF105","name":"DNA HELICASE RECQ FAMILY MEMBER"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00490","interpro_id":"IPR001650","interpro_name":"Helicase, C-terminal domain-like","interpro_type":"Domain","locations":[{"end":179,"score":7.799999774184567e-16,"start":96}],"model":"SM00490","name":"helicase superfamily c-terminal domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF52540","interpro_id":"IPR027417","interpro_name":"P-loop containing nucleoside triphosphate hydrolase","interpro_type":"Homologous_superfamily","locations":[{"end":191,"score":6.010000169521449e-28,"start":10}],"model":"0050677","name":"P-loop containing nucleoside triphosphate hydrolases"}],"location":{"chromosome_name":"supercont5.1","end_pos":4232126,"start_pos":4229530,"strand":"forward"},"low_complexity_region_coords":[[277,289],[324,339],[409,427],[534,550]],"ortholog_annotations":[{"gene_uniquename":"SJAG_05353","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC212.06c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_05353","ortholog_taxonid":4896,"ortholog_uniquename":"SPBCPT2R1.08c","reference_uniquename":"PMID:26896847"}],"product":"RecQ type DNA helicase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26896847":null},"subset_termids":["GO:0005634","GO:0005694","GO:0006281","GO:0006310","GO:0140097","GO:0016887","GO:0032200"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000722":null,"GO:0005524":null,"GO:0005634":null,"GO:0005737":null,"GO:0006281":null,"GO:0008270":null,"GO:0016887":null,"GO:0043138":null,"GO:0140445":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05353.1"],"transcripts_by_uniquename":{"SJAG_05353.1":null},"uniprot_identifier":"B6K8G0","uniquename":"SJAG_05353"}


id: SJAG_05354
data:
  {"cv_annotations":{},"dbxrefs":["UniProtKB/TrEMBL:B6K8G1","GOA:B6K8G1","InterPro:IPR013087","EnsemblGenomes-Gn:SJAG_05354","EnsemblGenomes-Tr:EEB05004"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_00020"},{"uniquename":"SJAG_00019"},{"uniquename":"SJAG_00018"},{"uniquename":"SJAG_00016"},{"uniquename":"SJAG_00015"},{"uniquename":"SJAG_05354"},{"uniquename":"SJAG_05353"},{"uniquename":"SJAG_00013"},{"uniquename":"SJAG_00012"},{"uniquename":"SJAG_00007"},{"uniquename":"SJAG_00006"}],"genes_by_uniquename":{"SJAG_05354":null},"has_protein_features":false,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.160.60","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":29,"score":0.000015999999959603883,"start":2}],"model":"2m9aA03","name":"Classic Zinc Finger"},{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00028","interpro_id":"IPR013087","interpro_name":"Zinc finger C2H2-type","interpro_type":"Domain","locations":[{"end":27,"score":0.0,"start":6}],"model":"PS00028","name":"Zinc finger C2H2 type domain signature"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50157","interpro_id":"IPR013087","interpro_name":"Zinc finger C2H2-type","interpro_type":"Domain","locations":[{"end":32,"score":0.0,"start":4}],"model":"PS50157","name":"Zinc finger C2H2 type domain profile"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00355","interpro_id":"IPR013087","interpro_name":"Zinc finger C2H2-type","interpro_type":"Domain","locations":[{"end":27,"score":0.04100000113248825,"start":4},{"end":216,"score":120.0,"start":194}],"model":"SM00355","name":"zinc finger"}],"location":{"chromosome_name":"supercont5.1","end_pos":4229271,"start_pos":4228222,"strand":"forward"},"product":"zinc finger C2H2-type","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_05354.1"],"transcripts_by_uniquename":{"SJAG_05354.1":null},"uniprot_identifier":"B6K8G1","uniquename":"SJAG_05354"}


id: SJAG_05358
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05358","GOA:T0S1F3","EnsemblGenomes-Tr:EQC53077","InterPro:IPR013087","UniProtKB/TrEMBL:T0S1F3"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05353"},{"uniquename":"SJAG_00013"},{"uniquename":"SJAG_00012"},{"uniquename":"SJAG_00007"},{"uniquename":"SJAG_00006"},{"uniquename":"SJAG_05358"},{"uniquename":"SJAG_00004"},{"uniquename":"SJAG_05173"}],"genes_by_uniquename":{"SJAG_05358":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PROSITE","evidence":"AddProsite","id":"PS00028","interpro_id":"IPR013087","interpro_name":"Zinc finger C2H2-type","interpro_type":"Domain","locations":[{"end":28,"score":0.0,"start":7}],"model":"PS00028","name":"Zinc finger C2H2 type domain signature"}],"location":{"chromosome_name":"supercont5.1","end_pos":4254293,"start_pos":4253427,"strand":"forward"},"low_complexity_region_coords":[[178,188]],"product":"zinc finger C2H2-type","taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_05358.1"],"transcripts_by_uniquename":{"SJAG_05358.1":null},"uniprot_identifier":"T0S1F3","uniquename":"SJAG_05358"}


id: SJAG_05372
data:
  {"cv_annotations":{"biological_process":[{"annotations":[110377],"is_not":false,"summary":null,"term":"GO:0006303"},{"annotations":[110378],"is_not":false,"summary":null,"term":"GO:0031297"},{"annotations":[110379],"is_not":false,"summary":null,"term":"GO:0120290"},{"annotations":[110380],"is_not":false,"summary":null,"term":"GO:0000723"}],"cellular_component":[{"annotations":[110370],"is_not":false,"summary":null,"term":"GO:0099115"},{"annotations":[110371],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[110372],"is_not":false,"summary":null,"term":"GO:0000792"},{"annotations":[110373],"is_not":false,"summary":null,"term":"GO:0043564"},{"annotations":[110374],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[110375],"is_not":false,"summary":null,"term":"GO:0005721"},{"annotations":[110376],"is_not":false,"summary":null,"term":"GO:0035861"}],"molecular_function":[{"annotations":[110381],"is_not":false,"summary":null,"term":"GO:0043138"},{"annotations":[110382],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[110383],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[110384],"is_not":false,"summary":null,"term":"GO:0003684"},{"annotations":[110385],"is_not":false,"summary":null,"term":"GO:0003690"},{"annotations":[110386],"is_not":false,"summary":null,"term":"GO:0042162"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_05372","EnsemblGenomes-Tr:EQC53076","InterPro:IPR005161","GOA:T0S376","InterPro:IPR006165","InterPro:IPR016194","InterPro:IPR036361","InterPro:IPR027388","InterPro:IPR036465","UniProtKB/TrEMBL:T0S376","InterPro:IPR003034","InterPro:IPR006164","InterPro:IPR005160"],"deletion_viability":"unknown","disordered_region_coords":[[3,5],[8,9],[84,87],[116,117],[159,163],[211,216],[429,432],[517,549],[551,554]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cwf26","uniquename":"SJAG_00094"},{"name":"nup97","uniquename":"SJAG_00093"},{"uniquename":"SJAG_00092"},{"uniquename":"SJAG_00091"},{"name":"mre11","uniquename":"SJAG_05373"},{"name":"pku70","uniquename":"SJAG_05372"},{"name":"pus1","uniquename":"SJAG_00088"},{"name":"sgf73","uniquename":"SJAG_00087"},{"name":"mrpl17","uniquename":"SJAG_00086"},{"uniquename":"SJAG_00085"},{"name":"met14","uniquename":"SJAG_00084"}],"genes_by_uniquename":{"HGNC:4055":null,"SJAG_05372":null,"SPCC126.02c":null,"YMR284W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.1600.10","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":515,"score":7.99999999855967e-23,"start":424}],"model":"1jeyA04","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.10.720.30","interpro_id":"IPR036361","interpro_name":"SAP domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":613,"score":7.499999810534064e-6,"start":579}],"model":"2wqgA00","name":"SAP domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.290.10","interpro_id":"IPR016194","interpro_name":"SPOC-like, C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":422,"score":8.900066936466211e-41,"start":236}],"model":"1jeyA02","name":""},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.40.50.410","interpro_id":"IPR036465","interpro_name":"von Willebrand factor A-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":231,"score":1.401298464324817e-45,"start":21}],"model":"1jeyA01","name":"von Willebrand factor, type A domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:4.10.970.10","interpro_id":"IPR027388","interpro_name":"Ku70, bridge and pillars domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":325,"score":8.900066936466211e-41,"start":261}],"model":"1jeyA03","name":"Ku70, bridge and pillars"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02037","interpro_id":"IPR003034","interpro_name":"SAP domain","interpro_type":"Domain","locations":[{"end":614,"score":0.0000779999973019585,"start":580}],"model":"PF02037","name":"SAP domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF02735","interpro_id":"IPR006164","interpro_name":"Ku70/Ku80 beta-barrel domain","interpro_type":"Domain","locations":[{"end":440,"score":8.699999948143758e-26,"start":247}],"model":"PF02735","name":"Ku70/Ku80 beta-barrel domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03730","interpro_id":"IPR005160","interpro_name":"Ku70/Ku80 C-terminal arm","interpro_type":"Domain","locations":[{"end":541,"score":2.800000032179839e-12,"start":457}],"model":"PF03730","name":"Ku70/Ku80 C-terminal arm"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF03731","interpro_id":"IPR005161","interpro_name":"Ku70/Ku80, N-terminal alpha/beta","interpro_type":"Domain","locations":[{"end":237,"score":2.0038568039844884e-43,"start":22}],"model":"PF03731","name":"Ku70/Ku80 N-terminal alpha/beta domain"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF003033","interpro_id":"IPR006165","interpro_name":"Ku70","interpro_type":"Family","locations":[{"end":616,"score":0.0,"start":1}],"model":"PIRSF003033","name":"Ku DNA-binding complex, Ku70 subunit"},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50800","interpro_id":"IPR003034","interpro_name":"SAP domain","interpro_type":"Domain","locations":[{"end":614,"score":0.0,"start":580}],"model":"PS50800","name":"SAP motif profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12604","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":614,"score":0.0,"start":15}],"model":"PTHR12604:SF2","name":"KU AUTOANTIGEN DNA HELICASE"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00513","interpro_id":"IPR003034","interpro_name":"SAP domain","interpro_type":"Domain","locations":[{"end":614,"score":0.00005199999941396527,"start":580}],"model":"SM00513","name":"Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00559","interpro_id":"IPR006164","interpro_name":"Ku70/Ku80 beta-barrel domain","interpro_type":"Domain","locations":[{"end":439,"score":2.300000017872926e-32,"start":292}],"model":"SM00559","name":"Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF100939","interpro_id":"IPR016194","interpro_name":"SPOC-like, C-terminal domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":512,"score":0.0,"start":236}],"model":"0039511","name":"SPOC domain-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53300","interpro_id":"IPR036465","interpro_name":"von Willebrand factor A-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":229,"score":3.0600014435614598e-40,"start":22}],"model":"0047568","name":"vWA-like"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF68906","interpro_id":"IPR036361","interpro_name":"SAP domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":614,"score":0.00003300000025774352,"start":578}],"model":"0039508","name":"SAP domain"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00578","interpro_id":"IPR006165","interpro_name":"Ku70","interpro_type":"Family","locations":[{"end":614,"score":0.0,"start":16}],"model":"TIGR00578","name":"ATP-dependent DNA helicase II, 70 kDa subunit (ku70)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00788","interpro_id":"IPR047087","interpro_name":"Ku70, core domain","interpro_type":"Domain","locations":[{"end":511,"score":0.0,"start":236}],"model":"cd00788","name":""}],"location":{"chromosome_name":"supercont5.1","end_pos":4087905,"start_pos":4085698,"strand":"reverse"},"low_complexity_region_coords":[[115,126],[567,579]],"name":"pku70","ortholog_annotations":[{"gene_uniquename":"SJAG_05372","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4055","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05372","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC126.02c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_05372","ortholog_taxonid":4932,"ortholog_uniquename":"YMR284W","reference_uniquename":"PMID:29761456"}],"product":"Ku70 (human XRCC6 ortholog) Pku70","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0006260","GO:0016887","GO:0006281","GO:0140097","GO:0005694","GO:0032200","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000723":null,"GO:0000792":null,"GO:0003684":null,"GO:0003690":null,"GO:0005524":null,"GO:0005634":null,"GO:0005721":null,"GO:0006303":null,"GO:0016887":null,"GO:0031297":null,"GO:0035861":null,"GO:0042162":null,"GO:0043138":null,"GO:0043564":null,"GO:0099115":null,"GO:0120290":null,"GO:0140445":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05372.1"],"transcripts_by_uniquename":{"SJAG_05372.1":null},"uniprot_identifier":"T0S376","uniquename":"SJAG_05372"}


id: SJAG_05373
data:
  {"cv_annotations":{"biological_process":[{"annotations":[84674],"is_not":false,"summary":null,"term":"GO:0000729"},{"annotations":[84675],"is_not":false,"summary":null,"term":"GO:0006302"},{"annotations":[84676],"is_not":false,"summary":null,"term":"GO:1990918"},{"annotations":[84677],"is_not":false,"summary":null,"term":"GO:0000724"},{"annotations":[84678],"is_not":false,"summary":null,"term":"GO:0006303"},{"annotations":[84679],"is_not":false,"summary":null,"term":"GO:0042138"},{"annotations":[84680],"is_not":false,"summary":null,"term":"GO:0097552"},{"annotations":[84681],"is_not":false,"summary":null,"term":"GO:0007095"},{"annotations":[84682],"is_not":false,"summary":null,"term":"GO:0031573"},{"annotations":[84683],"is_not":false,"summary":null,"term":"GO:0007131"},{"annotations":[84684],"is_not":false,"summary":null,"term":"GO:0000723"}],"cellular_component":[{"annotations":[84671],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[84672],"is_not":false,"summary":null,"term":"GO:0030870"},{"annotations":[84673],"is_not":false,"summary":null,"term":"GO:0035861"}],"molecular_function":[{"annotations":[84685],"is_not":false,"summary":null,"term":"GO:0045027"},{"annotations":[84686],"is_not":false,"summary":null,"term":"GO:0008311"},{"annotations":[84687],"is_not":false,"summary":null,"term":"GO:0030145"},{"annotations":[84688],"is_not":false,"summary":null,"term":"GO:0004518"},{"annotations":[84689],"is_not":false,"summary":null,"term":"GO:0008310"},{"annotations":[84690],"is_not":false,"summary":null,"term":"GO:0000014"},{"annotations":[84691],"is_not":false,"summary":null,"term":"GO:0000403"}]},"dbxrefs":["EnsemblGenomes-Tr:EQC53075","InterPro:IPR007281","GOA:T0RT79","InterPro:IPR004843","EnsemblGenomes-Gn:SJAG_05373","InterPro:IPR003701","UniProtKB/TrEMBL:T0RT79","InterPro:IPR041796","InterPro:IPR038487","InterPro:IPR029052"],"deletion_viability":"unknown","disordered_region_coords":[[1,6],[8,13],[359,360],[362,367],[631,663],[507,589],[604,603],[615,616]],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tfg1","uniquename":"SJAG_00095"},{"name":"cwf26","uniquename":"SJAG_00094"},{"name":"nup97","uniquename":"SJAG_00093"},{"uniquename":"SJAG_00092"},{"uniquename":"SJAG_00091"},{"name":"mre11","uniquename":"SJAG_05373"},{"name":"pku70","uniquename":"SJAG_05372"},{"name":"pus1","uniquename":"SJAG_00088"},{"name":"sgf73","uniquename":"SJAG_00087"},{"name":"mrpl17","uniquename":"SJAG_00086"},{"uniquename":"SJAG_00085"}],"genes_by_uniquename":{"HGNC:7230":null,"SJAG_05373":null,"SPAC13C5.07":null,"YMR224C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.110.110","interpro_id":"IPR038487","interpro_name":"Mre11, capping domain","interpro_type":"Homologous_superfamily","locations":[{"end":424,"score":2.6999999983842386e-36,"start":316}],"model":"4fbwA02","name":"Mre11, capping domain"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.60.21.10","interpro_id":"IPR029052","interpro_name":"Metallo-dependent phosphatase-like","interpro_type":"Homologous_superfamily","locations":[{"end":315,"score":0.0,"start":13}],"model":"4fbwB01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00149","interpro_id":"IPR004843","interpro_name":"Calcineurin-like phosphoesterase domain, ApaH type","interpro_type":"Domain","locations":[{"end":259,"score":1.199999960510567e-10,"start":23}],"model":"PF00149","name":"Calcineurin-like phosphoesterase"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04152","interpro_id":"IPR007281","interpro_name":"Mre11, DNA-binding","interpro_type":"Domain","locations":[{"end":472,"score":0.0,"start":304}],"model":"PF04152","name":"Mre11 DNA-binding presumed domain"},{"dbname":"PIRSF","evidence":"HMMPfam","id":"PIRSF000882","interpro_id":"IPR003701","interpro_name":"DNA double-strand break repair protein Mre11","interpro_type":"Family","locations":[{"end":660,"score":0.0,"start":8}],"model":"PIRSF000882","name":"Double-strand break repair protein MRE11"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10139","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":648,"score":0.0,"start":11}],"model":"PTHR10139:SF1","name":"DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11"},{"dbname":"SMART","evidence":"Smart scan","id":"SM01347","interpro_id":"IPR007281","interpro_name":"Mre11, DNA-binding","interpro_type":"Domain","locations":[{"end":472,"score":0.0,"start":304}],"model":"SM01347","name":"Mre11 DNA-binding presumed domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF56300","interpro_id":"IPR029052","interpro_name":"Metallo-dependent phosphatase-like","interpro_type":"Homologous_superfamily","locations":[{"end":368,"score":0.0,"start":23}],"model":"0039040","name":"Metallo-dependent phosphatases"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00583","interpro_id":"IPR003701","interpro_name":"DNA double-strand break repair protein Mre11","interpro_type":"Family","locations":[{"end":418,"score":0.0,"start":20}],"model":"TIGR00583","name":"DNA repair protein (mre11)"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00840","interpro_id":"IPR041796","interpro_name":"Mre11 nuclease, N-terminal metallophosphatase domain","interpro_type":"Domain","locations":[{"end":285,"score":0.0,"start":24}],"model":"cd00840","name":"Mre11 nuclease, N-terminal metallophosphatase domain"}],"location":{"chromosome_name":"supercont5.1","end_pos":4085411,"start_pos":4083177,"strand":"reverse"},"low_complexity_region_coords":[[590,603],[604,614],[617,630]],"name":"mre11","ortholog_annotations":[{"gene_uniquename":"SJAG_05373","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7230","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_05373","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC13C5.07","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_05373","ortholog_taxonid":4932,"ortholog_uniquename":"YMR224C","reference_uniquename":"PMID:29761456"}],"product":"Mre11 nuclease","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"subset_termids":["GO:0032200","GO:0004527","GO:0006281","GO:0016788","GO:0006310","GO:0005634","GO:0140013","GO:0005694","GO:0140097","GO:0023052","GO:0044772"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000014":null,"GO:0000403":null,"GO:0000723":null,"GO:0000724":null,"GO:0000729":null,"GO:0004518":null,"GO:0006302":null,"GO:0006303":null,"GO:0007095":null,"GO:0007131":null,"GO:0008310":null,"GO:0008311":null,"GO:0030145":null,"GO:0030870":null,"GO:0031573":null,"GO:0035861":null,"GO:0042138":null,"GO:0045027":null,"GO:0097552":null,"GO:0140445":null,"GO:1990918":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_05373.1"],"transcripts_by_uniquename":{"SJAG_05373.1":null},"uniprot_identifier":"T0RT79","uniquename":"SJAG_05373"}


