# terms

id: PBO:0108613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member C, pseudogene","termid":"PBO:0108613"}


id: PBO:0089515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (guanine-N7-)-methyltransferase Bud23","termid":"PBO:0089515"}


id: FYPO:0000075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of lovastatin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to lovastatin","synonyms":[{"name":"resistance to lovastatin during mitotic cell cycle","type":"related"},{"name":"resistance to lovastatin during vegetative growth","type":"exact"},{"name":"resistant to lovastatin","type":"exact"}],"termid":"FYPO:0000075"}


id: PBO:0055551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2987","termid":"PBO:0055551"}


id: GO:1901102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of gramicidin S.","definition_xrefs":["GOC:yaf","UniPathway:UPA00102","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete gramicidin S catabolic process (obsolete GO:1901102)","synonyms":[{"name":"gramicidin S breakdown","type":"exact"},{"name":"gramicidin S catabolism","type":"exact"},{"name":"gramicidin S degradation","type":"exact"}],"termid":"GO:1901102"}


id: PBO:0003697
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sfr1 assembly at DNA damage sites is dependent on Rhp51","termid":"PBO:0003697"}


id: PBO:0081043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing, antiviral 1 like","termid":"PBO:0081043"}


id: GO:0045687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glia cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gliogenesis","termid":"GO:0014015"},{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"positively_regulates","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell differentiation","synonyms":[{"name":"activation of glial cell differentiation","type":"narrow"},{"name":"positive regulation of glia cell differentiation","type":"exact"},{"name":"positive regulation of neuroglia differentiation","type":"exact"},{"name":"stimulation of glial cell differentiation","type":"narrow"},{"name":"up regulation of glial cell differentiation","type":"exact"},{"name":"up-regulation of glial cell differentiation","type":"exact"},{"name":"upregulation of glial cell differentiation","type":"exact"}],"termid":"GO:0045687"}


id: PBO:0073190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein T pseudogene 1","termid":"PBO:0073190"}


id: PBO:0028136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dense_body_present_in_nucleolus","termid":"PBO:0028136"}


id: PR:P78768
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vti1 gene.","definition_xrefs":["UniProtKB:P78768","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport v-SNARE protein vti1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.10","synonyms":[{"name":"Spom972h-vti1","type":"exact"}],"termid":"PR:P78768"}


id: PBO:0069137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 388, pseudogene","termid":"PBO:0069137"}


id: PBO:0077320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 59","termid":"PBO:0077320"}


id: GO:1902394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exodeoxyribonuclease activity.","definition_xrefs":["GOC:jl","GOC:TermGenie","PMID:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of deoxyribonuclease activity","termid":"GO:0032077"},{"relation_name":"is_a","term_name":"regulation of exodeoxyribonuclease activity","termid":"GO:1902392"},{"relation_name":"is_a","term_name":"positive regulation of exonuclease activity","termid":"GO:1905779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of exodeoxyribonuclease activity","synonyms":[{"name":"activation of exodeoxyribonuclease activity","type":"narrow"},{"name":"up regulation of exodeoxyribonuclease activity","type":"exact"},{"name":"up-regulation of exodeoxyribonuclease activity","type":"exact"},{"name":"upregulation of exodeoxyribonuclease activity","type":"exact"}],"termid":"GO:1902394"}


id: PBO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase publication types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paper","termid":"PBO:0000044"}


id: PBO:0087256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; involved in sphingolipid-mediated signaling pathway that controls endocytosis; activates Ypk1p and Ykr2p, components of signaling cascade required for maintenance of cell wall integrity; contains a PH-like domain; redundant with Pkh1p; PKH2 has a paralog, PKH1, that arose from the whole genome duplication","termid":"PBO:0087256"}


id: PR:O43031
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf28 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf28 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.02c","synonyms":[{"name":"Spom972h-cwf28","type":"exact"},{"name":"complexed with cdc5 protein 28 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43031"}


id: PBO:0030769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K14_acetylation_at_centromere_outer_repeat","termid":"PBO:0030769"}


id: GO:1903259
data:
  {"annotated_genes":["SJAG_01252"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101972],"is_not":false,"summary":null,"term":"GO:1903259"}]},"cv_name":"biological_process","definition":"The disaggregation of an exon-exon junction complex into its constituent components.","definition_xrefs":["PMID:24967911","GO_REF:0000079","GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exon-exon junction complex disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"EJC disassembly","type":"exact"}],"termid":"GO:1903259","terms_by_termid":{"GO:1903259":null}}


id: PBO:0091461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi3","termid":"PBO:0091461"}


id: PBO:0065190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein Z, vitamin K dependent plasma glycoprotein","termid":"PBO:0065190"}


id: PR:Q12706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q12706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase psk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.08","synonyms":[{"name":"Spom972h-psk1","type":"exact"}],"termid":"PR:Q12706"}


id: SO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of a nucleotide polymer that has no terminal nucleotide residues.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topology_attribute","termid":"SO:0000986"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular","synonyms":[{"name":"zero-ended","type":"related"}],"termid":"SO:0000988"}


id: PBO:0030516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_4-nitroquinoline_N-oxide","termid":"PBO:0030516"}


id: GO:0070847
data:
  {"annotated_genes":["SJAG_03622","SJAG_00297","SJAG_02849","SJAG_02494","SJAG_04705","SJAG_00904","SJAG_03573","SJAG_04647"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83586,98056,99519,102317,102449,104815,110819,114988],"is_not":false,"summary":null,"term":"GO:0070847"}]},"cv_name":"cellular_component","definition":"A protein complex that interacts with the carboxy-terminal domain of the largest subunit of RNA polymerase II and plays an active role in transducing the signal from a transcription factor to the transcriptional machinery. The core mediator complex has a stimulatory effect on basal transcription, and contains most of the same subdomains as the larger form of mediator complex -- a head domain comprising proteins known in Saccharomyces as Srb2, -4, and -5, Med6, -8, and -11, and Rox3 proteins; a middle domain comprising Med1, -4, and -7, Nut1 and -2, Cse2, Rgr1, Soh1, and Srb7 proteins; and a tail consisting of Gal11p, Med2p, Pgd1p, and Sin4p -- but lacks the regulatory subcomplex comprising Ssn2, -3, and -8, and Srb8 proteins. Metazoan core mediator complexes have similar modular structures and include homologs of yeast Srb and Med proteins.","definition_xrefs":["PMID:17870225","PMID:11454195","PMID:16168358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00297":null,"SJAG_00904":null,"SJAG_02494":null,"SJAG_02849":null,"SJAG_03573":null,"SJAG_03622":null,"SJAG_04647":null,"SJAG_04705":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"core mediator complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C mediator complex","type":"exact"},{"name":"S mediator complex","type":"exact"}],"termid":"GO:0070847","terms_by_termid":{"GO:0070847":null}}


id: PBO:0030291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_glucose_carbon_source","termid":"PBO:0030291"}


id: PBO:0078031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 21","termid":"PBO:0078031"}


id: PBO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I subfamily","termid":"PBO:0000746"}


id: GO:0016844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha(S)-strictosidine + H2O = secologanin + tryptamine.","definition_xrefs":["EC:4.3.3.2","RHEA:15013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine-lyase activity","termid":"GO:0016843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"strictosidine synthase activity","secondary_identifiers":["KEGG_REACTION:R03738","MetaCyc:STRICTOSIDINE-SYNTHASE-RXN"],"synonyms":[{"name":"3-alpha(S)-strictosidine tryptamine-lyase (secologanin-forming)","type":"related"},{"name":"3-alpha(S)-strictosidine tryptamine-lyase activity","type":"related"},{"name":"STR activity","type":"related"},{"name":"strictosidine synthetase activity","type":"related"}],"termid":"GO:0016844"}


id: PBO:0059001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism of cobalamin associated C","termid":"PBO:0059001"}


id: PBO:0061493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nik related kinase","termid":"PBO:0061493"}


id: PBO:0040827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculoviral IAP repeat containing 2","termid":"PBO:0040827"}


id: GO:1900563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dehydroaustinol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"dehydroaustinol metabolic process","termid":"GO:1900561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"dehydroaustinol biosynthetic process","synonyms":[{"name":"dehydroaustinol anabolism","type":"exact"},{"name":"dehydroaustinol biosynthesis","type":"exact"},{"name":"dehydroaustinol formation","type":"exact"},{"name":"dehydroaustinol synthesis","type":"exact"}],"termid":"GO:1900563"}


id: PBO:0000873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex epsilon subunit Cct5","termid":"PBO:0000873"}


id: GO:0070554
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 3, and a complexin (or orthologs thereof).","definition_xrefs":["PMID:8824312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-3-complexin complex","synonyms":[{"name":"SNARE complex (Stx3, Snap25, Vamp2, Cplx1)","type":"narrow"},{"name":"Stx3-Snap25-Vamp2-Cplx1 complex","type":"narrow"}],"termid":"GO:0070554"}


id: PBO:0052209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 5","termid":"PBO:0052209"}


id: GO:0090674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of an endothelial cell to the extracellular matrix via fibronectin.","definition_xrefs":["PMID:19460962","GOC:bc","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell-matrix adhesion","termid":"GO:0090673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}


id: GO:0005129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a granulocyte macrophage colony-stimulating factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"granulocyte macrophage colony-stimulating factor receptor binding","synonyms":[{"name":"GM-CSF receptor binding","type":"exact"},{"name":"GM-CSF receptor ligand","type":"narrow"},{"name":"GMC-SF receptor ligand","type":"narrow"},{"name":"granulocyte macrophage colony stimulating factor receptor binding","type":"exact"},{"name":"granulocyte macrophage colony-stimulating factor","type":"narrow"},{"name":"granulocyte macrophage colony-stimulating factor receptor ligand","type":"narrow"}],"termid":"GO:0005129"}


id: PBO:0073292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 14","termid":"PBO:0073292"}


id: PBO:0039226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT serine/threonine kinase 1","termid":"PBO:0039226"}


id: PBO:0109091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 5","termid":"PBO:0109091"}


id: GO:1904081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in neuron differentiation.","definition_xrefs":["PMID:24353061","GO_REF:0000060","GOC:kmv","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in neuron differentiation (obsolete GO:1904081)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in neuron differentiation","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in neuron differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global involved in neuron differentiation","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"}],"termid":"GO:1904081"}


id: PBO:0091671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific Smp foci lncRNA Sme2, long isoform","termid":"PBO:0091671"}


id: PBO:0040570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B4GALT4 antisense RNA 1","termid":"PBO:0040570"}


id: PBO:0084408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lyso-phosphatidylcholine acyltransferase; required for normal phospholipid content of mitochondrial membranes; major determinant of the final acyl chain composition of the mitochondrial-specific phospholipid cardiolipin; mutations in human ortholog tafazzin (TAZ) cause Barth syndrome, a rare X-linked disease characterized by skeletal and cardiomyopathy and bouts of cyclic neutropenia; a specific splice variant of human TAZ can complement yeast null mutant","termid":"PBO:0084408"}


id: PBO:0078156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 34","termid":"PBO:0078156"}


id: FYPO:0007451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of the cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:12789340","PMID:15809031","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"},{"relation_name":"is_a","term_name":"normal protein localization to cell cortex of cell tip","termid":"FYPO:0006876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to cell cortex of cell tip during vegetative growth","synonyms":[{"name":"normal protein localisation to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"normal protein localization to cell cortex of cell tip during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell tip cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0007451"}


id: PBO:0031771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_fermentation","termid":"PBO:0031771"}


id: PBO:0029353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_binding","termid":"PBO:0029353"}


id: GO:0097307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a farnesol stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to farnesol","termid":"GO:0097307"}


id: PBO:0074945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 109B","termid":"PBO:0074945"}


id: PBO:0034331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-before","termid":"PBO:0034331"}


id: PBO:0065410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 7 pseudogene 1","termid":"PBO:0065410"}


id: GO:0102724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + curcumin monoglucoside = H+ + curcumin diglucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:curcumin monoglucoside glucosyltransferase activity (obsolete GO:0102724)","termid":"GO:0102724"}


id: PBO:0073884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 2","termid":"PBO:0073884"}


id: GO:0036333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of hepatocytes within a population of cells. Hepatocytes are specialized epithelial cells of the liver that are organized into interconnected plates called lobules.","definition_xrefs":["CL:0000182","GOC:nhn","PMID:19878874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte homeostasis","termid":"GO:0036333"}


id: PBO:0051902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGA9 antisense RNA 1","termid":"PBO:0051902"}


id: PBO:0088459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER phosphatidate cytidylyltransferase Bbl1","termid":"PBO:0088459"}


id: PBO:0067849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 151","termid":"PBO:0067849"}


id: PBO:0027772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tingenone","termid":"PBO:0027772"}


id: PR:O74558
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mob2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maintenance of ploidy protein mob2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.04c","synonyms":[{"name":"Spom972h-mob2","type":"exact"}],"termid":"PR:O74558"}


id: GO:0002124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior performed in defence of a fixed area against intruders, typically conspecifics.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"territorial aggressive behavior","synonyms":[{"name":"territorial aggression","type":"exact"}],"termid":"GO:0002124"}


id: GO:0022023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a radial glial cell in the forebrain.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell fate commitment","termid":"GO:0021781"},{"relation_name":"is_a","term_name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"},{"relation_name":"part_of","term_name":"forebrain radial glial cell differentiation","termid":"GO:0021861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glial cell fate commitment in forebrain","termid":"GO:0022023"}


id: GO:0019838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"growth factor binding","synonyms":[{"name":"neurotrophin TRK receptor activity","type":"related"}],"termid":"GO:0019838"}


id: PBO:0075347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOS Ras/Rho guanine nucleotide exchange factor 2","termid":"PBO:0075347"}


id: PR:P40373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP phosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.05c","secondary_identifiers":["UniProtKB:P40373"],"synonyms":[{"name":"ATP-PRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-PRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hisG","type":"exact"}],"termid":"PR:P40373"}


id: GO:1904419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomeric loop formation.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:nc","GOC:TermGenie","PMID:22579284","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomeric loop formation","termid":"GO:1904418"},{"relation_name":"negatively_regulates","term_name":"telomeric loop formation","termid":"GO:0031627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"negative regulation of telomeric loop formation","synonyms":[{"name":"down regulation of t-loop biosynthesis","type":"exact"},{"name":"down regulation of t-loop formation","type":"exact"},{"name":"down regulation of telomeric loop formation","type":"exact"},{"name":"down-regulation of t-loop biosynthesis","type":"exact"},{"name":"down-regulation of t-loop formation","type":"exact"},{"name":"down-regulation of telomeric loop formation","type":"exact"},{"name":"downregulation of t-loop biosynthesis","type":"exact"},{"name":"downregulation of t-loop formation","type":"exact"},{"name":"downregulation of telomeric loop formation","type":"exact"},{"name":"inhibition of t-loop biosynthesis","type":"narrow"},{"name":"inhibition of t-loop formation","type":"narrow"},{"name":"inhibition of telomeric loop formation","type":"narrow"},{"name":"negative regulation of t-loop biosynthesis","type":"exact"},{"name":"negative regulation of t-loop formation","type":"exact"}],"termid":"GO:1904419"}


id: GO:0043007
data:
  {"annotated_genes":["SJAG_01050","SJAG_04816","SJAG_03997","SJAG_05237","SJAG_03898","SJAG_00247","SJAG_05180","SJAG_04855","SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92121,95382,97272,113233],"is_not":false,"summary":null,"term":"GO:0043007"},{"annotations":[100521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045458"},{"annotations":[99332],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[111112,95462,98382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"}]},"cv_name":"biological_process","definition":"Any process involved in sustaining the fidelity and copy number of rDNA repeats.","definition_xrefs":["PMID:14528010","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of DNA repeat elements","termid":"GO:0043570"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01050":null,"SJAG_03898":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04816":null,"SJAG_04855":null,"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"maintenance of rDNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"rDNA maintenance","type":"exact"},{"name":"ribosomal DNA maintenance","type":"exact"}],"termid":"GO:0043007","terms_by_termid":{"GO:0031582":null,"GO:0043007":null,"GO:0045458":null,"GO:1902681":null}}


id: _global:regulates_o_results_in_movement_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"A relation that holds between a process that regulates locomotion and the cell or organism whose locomotion is being regulated.","definition_xrefs":["GOC:cjm","GOC:mtg_berkeley_2012_08_27","GOC:dph"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_process_that_results_in_movement_of","secondary_identifiers":["GOREL:0001005"],"synonyms":[{"name":"regulates_o_results_in_movement_of","type":"exact"}],"termid":"_global:regulates_o_results_in_movement_of"}


id: PBO:0030258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_complex_localization","termid":"PBO:0030258"}


id: FYPO:0003452
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is observed in a particular location where it is not normally found.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"},{"relation_name":"output_of","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"mislocalized protein","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"mislocalised protein","type":"exact"}],"termid":"FYPO:0003452","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: PBO:0062229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 2","termid":"PBO:0062229"}


id: RO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"bearer_of","termid":"RO:0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_disposition","termid":"RO:0000091"}


id: PBO:0072563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRAS2 pseudogene 1","termid":"PBO:0072563"}


id: GO:0036530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of methylglyoxal from a glycated protein, to form lactate and a deglycated protein.","definition_xrefs":["GOC:PARL","PMID:25416785","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal metabolic process","termid":"GO:0009438"},{"relation_name":"is_a","term_name":"lactate biosynthetic process","termid":"GO:0019249"},{"relation_name":"is_a","term_name":"protein deglycation","termid":"GO:0036525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"protein deglycation, methylglyoxal removal","synonyms":[{"name":"protein deglycation of methylglyoxal-glycated protein","type":"related"}],"termid":"GO:0036530"}


id: PBO:0041576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C21orf62 antisense RNA 1","termid":"PBO:0041576"}


id: SO:0002140
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of replication that initiates early in S phase.","definition_xrefs":["PMID:23348837","PMID:9115207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early_origin_of_replication","synonyms":[{"name":"early origin","type":"exact"},{"name":"early origin of replication","type":"exact"},{"name":"early replication origin","type":"exact"}],"termid":"SO:0002140"}


id: PBO:0053038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 1, translational regulator","termid":"PBO:0053038"}


id: PBO:0041641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1G antisense RNA 1","termid":"PBO:0041641"}


id: PBO:0082648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of serine palmitoyltransferase; responsible along with Lcb2p for the first committed step in sphingolipid synthesis, which is the condensation of serine with palmitoyl-CoA to form 3-ketosphinganine","termid":"PBO:0082648"}


id: PBO:0069961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1255, pseudogene","termid":"PBO:0069961"}


id: SO:0001519
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inversion event that does not include the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"inversion_attribute","termid":"SO:0001517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paracentric","termid":"SO:0001519"}


id: PBO:0077354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 94","termid":"PBO:0077354"}


id: PBO:0031107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_DNA_damaging_agents","termid":"PBO:0031107"}


id: PBO:0078834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (GGG) 1-1","termid":"PBO:0078834"}


id: PBO:0112693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex polyphosphate synthase subunit Vtc4","termid":"PBO:0112693"}


id: PBO:0003276
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.9","termid":"PBO:0003276"}


id: PBO:0074493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAI3 antisense RNA 1","termid":"PBO:0074493"}


id: PBO:0041810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium regulated heat stable protein 1","termid":"PBO:0041810"}


id: MOD:01970
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 5-glutamyl glutamic acid, forming an isopeptide bond with a free glutamic acid.","definition_xrefs":["PubMed:23434852","PubMed:1680872","PubMed:10747868","RESID:AA0612","Unimod:450","PubMed:15525938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-isoglutamyl-polyglutamic acid","termid":"MOD:00207"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl glutamic acid","synonyms":[{"name":"(2S)-2-([(4S)-4-amino-4-carboxybutanoyl]amino)pentanedioic acid","type":"exact"},{"name":"(2S)-2-[(4S)-4-amino-4-carboxybutanamido]pentanedioic acid","type":"exact"},{"name":"2-([4-azanyl-4-carboxybutanoyl]azanyl)pentanedioic acid","type":"exact"},{"name":"5-glutamyl glutamic acid","type":"exact"},{"name":"Glu","type":"related"},{"name":"MOD_RES 5-glutamyl glutamate","type":"exact"},{"name":"N alpha -(gamma-Glutamyl)-Glu","type":"exact"},{"name":"N-(gamma-L-glutamyl)-L-glutamic acid","type":"exact"},{"name":"gamma-glutamylglutamate","type":"exact"},{"name":"isoglutamyl glutamic acid","type":"exact"},{"name":"isoglutamyl monoglutamic acid","type":"exact"},{"name":"monoglutamyl","type":"related"}],"termid":"MOD:01970"}


id: GO:1900163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipid scramblase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transporter activity","termid":"GO:0110113"},{"relation_name":"is_a","term_name":"regulation of phospholipid scramblase activity","termid":"GO:1900161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of phospholipid scramblase activity","synonyms":[{"name":"activation of phospholipid scramblase activity","type":"narrow"},{"name":"up regulation of phospholipid scramblase activity","type":"exact"},{"name":"up-regulation of phospholipid scramblase activity","type":"exact"},{"name":"upregulation of phospholipid scramblase activity","type":"exact"}],"termid":"GO:1900163"}


id: PBO:0054096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1449","termid":"PBO:0054096"}


id: PBO:0076974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 5","termid":"PBO:0076974"}


id: GO:0021995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of joining together the neural folds at either end of the neural tube.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuropore closure","termid":"GO:0021995"}


id: GO:0052631
data:
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id: PBO:0043134
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id: PBO:0005704
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id: PBO:0000707
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id: PBO:0111931
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id: PR:O60179
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id: PBO:0029735
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id: GO:0005148
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id: PR:C6Y4D4
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id: GO:0048453
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id: GO:0019504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of stachydrine, N-methylproline methylbetaine, the betaine derivative of L-proline.","definition_xrefs":["PMID:24520058","PMID:10689197","PMID:1804402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"L-proline betaine metabolic process","termid":"GO:0019502"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-proline betaine catabolic process","secondary_identifiers":["MetaCyc:P561-PWY"],"synonyms":[{"name":"stachydrine breakdown","type":"exact"},{"name":"stachydrine catabolic process","type":"exact"},{"name":"stachydrine catabolism","type":"exact"},{"name":"stachydrine degradation","type":"exact"}],"termid":"GO:0019504"}


id: PBO:0079902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UQCRB antisense RNA 1","termid":"PBO:0079902"}


id: GO:0019774
data:
  {"annotated_genes":["SJAG_01014","SJAG_04541","SJAG_04229","SJAG_00128","SJAG_03151","SJAG_04888","SJAG_04969"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89444,90101,92336,93816,106815,107245,113909],"is_not":false,"summary":null,"term":"GO:0019774"}]},"cv_name":"cellular_component","definition":"The proteasome core subcomplex that constitutes the two inner rings of the proteasome core complex. An example of this component is found in Mus musculus.","definition_xrefs":["PMID:10854779","GOC:rb","GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"proteasome core complex","termid":"GO:0005839"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00128":null,"SJAG_01014":null,"SJAG_03151":null,"SJAG_04229":null,"SJAG_04541":null,"SJAG_04888":null,"SJAG_04969":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proteasome core complex, beta-subunit complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019774","terms_by_termid":{"GO:0019774":null}}


id: GO:1904743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomeric DNA binding.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","PMID:24415760","GO_REF:0000059","GOC:nc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"},{"relation_name":"is_a","term_name":"regulation of telomeric DNA binding","termid":"GO:1904742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomeric DNA binding","synonyms":[{"name":"down regulation of telomere binding","type":"exact"},{"name":"down regulation of telomeric DNA binding","type":"exact"},{"name":"down regulation of telomeric repeat binding","type":"exact"},{"name":"down-regulation of telomere binding","type":"exact"},{"name":"down-regulation of telomeric DNA binding","type":"exact"},{"name":"down-regulation of telomeric repeat binding","type":"exact"},{"name":"downregulation of telomere binding","type":"exact"},{"name":"downregulation of telomeric DNA binding","type":"exact"},{"name":"downregulation of telomeric repeat binding","type":"exact"},{"name":"inhibition of telomere binding","type":"narrow"},{"name":"inhibition of telomeric DNA binding","type":"narrow"},{"name":"inhibition of telomeric repeat binding","type":"narrow"},{"name":"negative regulation of telomere binding","type":"exact"},{"name":"negative regulation of telomeric repeat binding","type":"exact"}],"termid":"GO:1904743"}


id: PR:Q96WS1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96WS1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.08","synonyms":[{"name":"Spom972h-wtf11","type":"exact"}],"termid":"PR:Q96WS1"}


id: GO:0102251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10'-apo-beta-carotenal + O2 = 13-apo-beta-carotenone + 4-methylocta-2,4,6-trienedial.","definition_xrefs":["EC:1.13.11.70","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"all-trans-beta-apo-10'-carotenal cleavage oxygenase activity","secondary_identifiers":["RHEA:26401","MetaCyc:RXN-12393"],"termid":"GO:0102251"}


id: PBO:0018257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III sdj1","termid":"PBO:0018257"}


id: GO:0052617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADPH + ent-kaur-16-en-19-al + oxygen = H2O + NADP+ + ent-kaurenoate.","definition_xrefs":["MetaCyc:RXN-7580"],"gene_count":0,"genotype_count":0,"name":"obsolete ent-kaur-16-en-19-al oxidase activity (obsolete GO:0052617)","termid":"GO:0052617"}


id: SO:0000608
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"snoRNA that is associated with guiding polyuridylation. It contains two short conserved sequence motifs: H box (ANANNA) and ACA (ACA).","direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_encoding","termid":"SO:0000578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H_ACA_box_snoRNA_encoding","synonyms":[{"name":"H ACA box snoRNA encoding","type":"exact"}],"termid":"SO:0000608"}


id: PBO:0055567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3003","termid":"PBO:0055567"}


id: PBO:0030898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulation_phenotype_during_vegetative_growth","termid":"PBO:0030898"}


id: PBO:0062417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 53 pseudogene","termid":"PBO:0062417"}


id: PBO:0075926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 18","termid":"PBO:0075926"}


id: PBO:0091269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary transcript for snoZ3,Z4,Z5,Z7,Z8","termid":"PBO:0091269"}


id: GO:0005172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor binding","synonyms":[{"name":"VEGF receptor binding","type":"exact"},{"name":"VEGFR binding","type":"exact"},{"name":"vascular endothelial growth factor","type":"narrow"},{"name":"vascular endothelial growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005172"}


id: PBO:0043826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPS1 intronic transcript 1","termid":"PBO:0043826"}


id: PBO:0038482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 7","termid":"PBO:0038482"}


id: GO:0034974
data:
  {"annotated_genes":["SJAG_01495","SJAG_03221"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84065,106390],"is_not":false,"summary":null,"term":"GO:0034974"}]},"cv_name":"cellular_component","definition":"A protein complex involved that contains proteins known in Schizosaccharomyces as Swi5 monomers and Swi2, and is involved in mating type switching.","definition_xrefs":["PMID:14663140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01495":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Swi5-Swi2 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Swi5 complex","type":"broad"}],"termid":"GO:0034974","terms_by_termid":{"GO:0034974":null}}


id: FYPO:0003424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mitochondrial RNA measured in a cell is greater than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered RNA level in mitochondrion","termid":"FYPO:0004958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased mitochondrial RNA level","synonyms":[{"name":"increased RNA level in mitochondrion","type":"exact"},{"name":"increased mitochondrial RNA accumulation","type":"related"},{"name":"increased mitochondrial RNA level during mitotic cell cycle","type":"related"},{"name":"increased mitochondrial RNA level during vegetative growth","type":"exact"},{"name":"increased mitochondrial transcript level","type":"exact"}],"termid":"FYPO:0003424"}


id: PBO:0040125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 11","termid":"PBO:0040125"}


id: PBO:0087710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; protein abundance increases in response to DNA replication stress","termid":"PBO:0087710"}


id: PBO:0078894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 5-1","termid":"PBO:0078894"}


id: GO:0045871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of rhodopsin gene expression.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of rhodopsin gene expression (obsolete GO:0045871)","synonyms":[{"name":"down regulation of rhodopsin gene activity","type":"exact"},{"name":"down-regulation of rhodopsin gene activity","type":"exact"},{"name":"downregulation of rhodopsin gene activity","type":"exact"},{"name":"inhibition of rhodopsin gene activity","type":"narrow"},{"name":"negative regulation of rhodopsin gene activity","type":"exact"}],"termid":"GO:0045871"}


id: GO:0001762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of beta-alanine, 3-aminopropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"beta-alanine transport","termid":"GO:0001762"}


id: FYPO:0001553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA processing is abnormal. RNA processing is the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.","definition_xrefs":["GO:0006396","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"abnormal RNA processing","synonyms":[{"name":"abnormal RNA processing during mitotic cell cycle","type":"related"},{"name":"abnormal RNA processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001553"}


id: PBO:0088125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane cation-chloride cotransporter (CCC); likely mediates K+ and Cl- cotransport into the vacuole; has a role in potassium homeostasis and salt tolerance; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs); similar to mammalian electroneutral Na(+)-(K+)-C1- cotransporter family","termid":"PBO:0088125"}


id: PBO:0053433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 378","termid":"PBO:0053433"}


id: PBO:0059610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 22","termid":"PBO:0059610"}


id: RO:0002508
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of determined by","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_influences","termid":"RO:0002566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"determines","termid":"RO:0002508"}


id: MOD:01715
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with a Proteome Sciences TMT6plex reporter+balance group.","definition_xrefs":["Unimod:214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01715"}


id: FYPO:0005059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic DNA double-strand break resection is decreased. Meiotic DNA double-strand break resection is the process by which long-tract single-stranded 3'-end DNA is generated by removal of bases from a 5' end from which SPO11/Rec12-oligonucleotide complexes have been removed.","definition_xrefs":["PMID:26130711","PomBase:mah","GO:1990899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"decreased meiotic DNA double-strand break resection","synonyms":[{"name":"decreased meiotic DNA double-strand break resectioning","type":"exact"},{"name":"reduced meiotic DNA double-strand break resection","type":"exact"}],"termid":"FYPO:0005059"}


id: GO:0140867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ADP-ribose groups to the glutamate-18 residue of histone H2B (or an equivalent residue).","definition_xrefs":["PMID:28252050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein-glutamate ADP-ribosyltransferase activity","termid":"GO:0140807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140096","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"NAD+-histone H2BE18 glutamate ADP-ribosyltransferase activity","synonyms":[{"name":"NAD+-histone H2B-E18 glutamate ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+-histone-glutamate ADP-ribosyltransferase activity (H2B-E18 specific)","type":"exact"}],"termid":"GO:0140867"}


id: PBO:0058358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4731","termid":"PBO:0058358"}


id: PBO:0080817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 2","termid":"PBO:0080817"}


id: PBO:0071568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 34","termid":"PBO:0071568"}


id: GO:1990971
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Glycoprotein complex of the C1q/TNF superfamily found in the extracellular matrix (ECM) where it is an important component of the elastic fiber system. A homotrimer that will combine to form supramolecular EMILIN structures.","definition_xrefs":["GOC:bhm","PMID:10821830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-matrix adhesion","termid":"GO:0098637"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"EMILIN complex","synonyms":[{"name":"EMILIN-1 complex","type":"narrow"},{"name":"EMILIN-2 complex","type":"narrow"},{"name":"Elastic microfibrillar interface 1 complex","type":"narrow"},{"name":"Elastic microfibrillar interface 2 complex","type":"narrow"}],"termid":"GO:1990971"}


id: PBO:0013792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRC1-L/borderline left","termid":"PBO:0013792"}


id: PBO:0077759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20 pseudogene 1","termid":"PBO:0077759"}


id: PBO:0065623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN2 pseudogene 1","termid":"PBO:0065623"}


id: PBO:0067991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 293","termid":"PBO:0067991"}


id: GO:1901492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphangiogenesis.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:20133819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of lymphangiogenesis","termid":"GO:1901490"},{"relation_name":"positively_regulates","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphangiogenesis","synonyms":[{"name":"activation of lymph vessel formation","type":"narrow"},{"name":"activation of lymphangiogenesis","type":"narrow"},{"name":"positive regulation of lymph vessel formation","type":"exact"},{"name":"up regulation of lymph vessel formation","type":"exact"},{"name":"up regulation of lymphangiogenesis","type":"exact"},{"name":"up-regulation of lymph vessel formation","type":"exact"},{"name":"up-regulation of lymphangiogenesis","type":"exact"},{"name":"upregulation of lymph vessel formation","type":"exact"},{"name":"upregulation of lymphangiogenesis","type":"exact"}],"termid":"GO:1901492"}


id: GO:0071324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disaccharide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"},{"relation_name":"is_a","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to disaccharide stimulus","termid":"GO:0071324"}


id: PR:O94701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fic1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ingression protein fic1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.18c","synonyms":[{"name":"Spom972h-fic1","type":"exact"},{"name":"cdc15-interacting C2 domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94701"}


id: GO:0035510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an alkyl group from one or more nucleotides within an DNA molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA dealkylation","termid":"GO:0035510"}


id: PBO:0040715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAF chromatin remodeling complex subunit BCL7A","termid":"PBO:0040715"}


id: PBO:0113115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum protein of unknown function; deletion confers resistance to fluconazole and to osmotic stress","termid":"PBO:0113115"}


id: SO:0000509
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one D-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_J_C_cluster","synonyms":[{"name":"D J C cluster","type":"exact"},{"name":"D-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000509"}


id: PR:Q9USY2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A squamous cell carcinoma antigen recognized by T-cells 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23269:SF0","OMA:SCHPO04004","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C1861.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.04c","secondary_identifiers":["UniProtKB:Q9USY2"],"synonyms":[{"name":"Spom972h-SART3","type":"exact"}],"termid":"PR:Q9USY2"}


id: PBO:0080613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 47","termid":"PBO:0080613"}


id: PBO:0065990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination activating 2","termid":"PBO:0065990"}


id: PBO:0073072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein pseudogene 1","termid":"PBO:0073072"}


id: PBO:0053338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 205","termid":"PBO:0053338"}


id: GO:0051883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by an organism that results in the death of cells in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete killing of cells in other organism involved in symbiotic interaction (obsolete GO:0051883)","synonyms":[{"name":"killing of cells in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0051883"}


id: GO:1905711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phosphatidylethanolamine stimulus.","definition_xrefs":["PMID:1657995","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to phosphatidylethanolamine","synonyms":[{"name":"response to PE","type":"exact"},{"name":"response to PtdEtn","type":"exact"},{"name":"response to phosphatidyl(amino)ethanols","type":"exact"},{"name":"response to phosphatidylethanolamines","type":"exact"}],"termid":"GO:1905711"}


id: GO:0141003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group to a histone variant H2AX.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone kinase activity","termid":"GO:0035173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0004672","GO:0140096","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"histone H2AX kinase activity","termid":"GO:0141003"}


id: GO:0006979
data:
  {"annotated_genes":["SJAG_03414","SJAG_01855","SJAG_04311","SJAG_05181","SJAG_03924","SJAG_01216","SJAG_02945","SJAG_02515","SJAG_01199","SJAG_03903","SJAG_00996","SJAG_02135","SJAG_02249","SJAG_02044","SJAG_00419","SJAG_01292","SJAG_02433","SJAG_00027","SJAG_01162","SJAG_04632","SJAG_03166","SJAG_04403","SJAG_03653","SJAG_06611","SJAG_03330","SJAG_03896","SJAG_00668","SJAG_05014","SJAG_04399","SJAG_01734","SJAG_03303","SJAG_02592","SJAG_04287","SJAG_04953","SJAG_00141","SJAG_00984","SJAG_02573","SJAG_02485","SJAG_03828","SJAG_04125","SJAG_04823","SJAG_01084","SJAG_04036","SJAG_03886","SJAG_04788","SJAG_02858","SJAG_06622","SJAG_06621","SJAG_02495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101122,104927,96098,91300,113448,114352],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[90472,97095,89661,67401,85523,109602,97905,89358,105030,92098,105032,105034,105035,110559,91674,86212,94062,112823,110833,72319,105029,93731,86311,88255,105033,86999,97443,97958,101305,103903,74108,84697,105031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034599"},{"annotations":[96099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034614"},{"annotations":[85924,86313,87624],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:2000815"},{"annotations":[89226,106188,96257,95374,67607,64549,57914,85524,106233,85109],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:jl","PMID:12115731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00141":null,"SJAG_00419":null,"SJAG_00668":null,"SJAG_00984":null,"SJAG_00996":null,"SJAG_01084":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01734":null,"SJAG_01855":null,"SJAG_02044":null,"SJAG_02135":null,"SJAG_02249":null,"SJAG_02433":null,"SJAG_02485":null,"SJAG_02495":null,"SJAG_02515":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02858":null,"SJAG_02945":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03330":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03828":null,"SJAG_03886":null,"SJAG_03896":null,"SJAG_03903":null,"SJAG_03924":null,"SJAG_04036":null,"SJAG_04125":null,"SJAG_04287":null,"SJAG_04311":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05014":null,"SJAG_05181":null,"SJAG_06611":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxidative stress","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006979","terms_by_termid":{"GO:0019430":null,"GO:0034599":null,"GO:0034614":null,"GO:0061692":null,"GO:2000815":null}}


id: PBO:0050158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 14","termid":"PBO:0050158"}


id: PR:O74758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17D11.03c gene.","definition_xrefs":["UniProtKB:O74758","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17D11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.03c","synonyms":[{"name":"Spom972h-SPBC17D11.03c","type":"exact"}],"termid":"PR:O74758"}


id: PBO:0082108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Accessory subunit of DNA polymerase zeta; involved in translesion synthesis during post-replication repair; required for mutagenesis induced by DNA damage; involved in double-strand break repair; may be involved in meiosis; forms a complex with Rev3p, Pol31p and Pol32p","termid":"PBO:0082108"}


id: GO:0003994
data:
  {"annotated_genes":["SJAG_03588","SJAG_01630"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90566,109553],"is_not":false,"summary":null,"term":"GO:0003994"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: citrate = isocitrate. The reaction occurs in two steps: (1) citrate = cis-aconitate + H2O, (2) cis-aconitate + H2O = isocitrate. This reaction is the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate.","definition_xrefs":["EC:4.2.1.3","GOC:vw","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01630":null,"SJAG_03588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"aconitate hydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0052632","Reactome:R-HSA-5690911","Reactome:R-HSA-70971","MetaCyc:RXN-14047","Reactome:R-HSA-450975","RHEA:10336"],"synonyms":[{"name":"aconitase activity","type":"exact"},{"name":"cis-aconitase activity","type":"related"},{"name":"citrate hydro-lyase activity","type":"broad"},{"name":"citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"related"},{"name":"citrate(isocitrate) hydro-lyase activity","type":"related"}],"termid":"GO:0003994","terms_by_termid":{"GO:0003994":null}}


id: SO:0001400
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified lysine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_lysine","secondary_identifiers":["MOD:00912"],"synonyms":[{"name":"ModLys","type":"exact"},{"name":"modified L lysine","type":"exact"},{"name":"modified L-lysine","type":"exact"}],"termid":"SO:0001400"}


id: GO:1903393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adherens junction organization.","definition_xrefs":["PMID:21724833","GOC:als","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of adherens junction organization","termid":"GO:1903391"},{"relation_name":"positively_regulates","term_name":"adherens junction organization","termid":"GO:0034332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adherens junction organization","synonyms":[{"name":"activation of adherens junction assembly and maintenance","type":"narrow"},{"name":"activation of adherens junction organisation","type":"narrow"},{"name":"activation of adherens junction organization","type":"narrow"},{"name":"positive regulation of adherens junction assembly and maintenance","type":"exact"},{"name":"positive regulation of adherens junction organisation","type":"exact"},{"name":"up regulation of adherens junction assembly and maintenance","type":"exact"},{"name":"up regulation of adherens junction organisation","type":"exact"},{"name":"up regulation of adherens junction organization","type":"exact"},{"name":"up-regulation of adherens junction assembly and maintenance","type":"exact"},{"name":"up-regulation of adherens junction organisation","type":"exact"},{"name":"up-regulation of adherens junction organization","type":"exact"},{"name":"upregulation of adherens junction assembly and maintenance","type":"exact"},{"name":"upregulation of adherens junction organisation","type":"exact"},{"name":"upregulation of adherens junction organization","type":"exact"}],"termid":"GO:1903393"}


id: GO:0008418
data:
  {"annotated_genes":["SJAG_00476","SJAG_00450"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66654,103053],"is_not":false,"summary":null,"term":"GO:0008418"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-terminal L-asparaginyl-[protein] + H+ + H2O = N-terminal L-aspartyl-[protein] + NH4+. This reaction is the deamidation of an N-terminal asparagine residue in a peptide or protein.","definition_xrefs":["PMID:8910481","RHEA:50676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00450":null,"SJAG_00476":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810","GO:0140096"],"is_obsolete":false,"name":"protein-N-terminal asparagine amidohydrolase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.1.121"],"termid":"GO:0008418","terms_by_termid":{"GO:0008418":null}}


id: PBO:0066198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 15B","termid":"PBO:0066198"}


id: PBO:0056971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 26a-2","termid":"PBO:0056971"}


id: SO:0000275
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Small nucleolar RNAs (snoRNAs) are short non-coding RNAs enriched in the nucleolus as components of small nucleolar ribonucleoproteins. They guide ribose methylation and pseudouridylation of rRNAs and snRNAs, and a subgroup regulate excision of rRNAs from rRNA precursor transcripts. snoRNAs may also guide rRNA acetylation and tRNA methylation, and regulate mRNA abundance and alternative splicing.","definition_xrefs":["PMID:31828325","GOC:kgc"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"},{"relation_name":"is_a","term_name":"sncRNA","termid":"SO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:snoRNA","type":"exact"},{"name":"small nucleolar RNA","type":"exact"}],"termid":"SO:0000275"}


id: FYPO:0006692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal mitotic sister chromatid separation, producing inviable daughter cells, and in which the septum forms so as to separate the nucleus into two unequal masses, each in one compartment.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cut","termid":"FYPO:0000229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000032","FYPO:0000337"],"is_obsolete":false,"name":"cut with septum between unequally sized nuclei","synonyms":[{"name":"cut with septum between unequally sized nuclei during mitotic cell cycle","type":"related"},{"name":"cut with septum between unequally sized nuclei during vegetative growth","type":"exact"},{"name":"cut with unequally sized nuclei, one either side of septum","type":"exact"},{"name":"septation following abnormal mitotic sister chromatid segregation, with septum between unequally sized nuclei","type":"exact"}],"termid":"FYPO:0006692"}


id: GO:0047028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + 6-lactoyl-5,6,7,8-tetrahydropterin = NADPH + H+ + 6-pyruvoyltetrahydropterin.","definition_xrefs":["EC:1.1.1.220","MetaCyc:1.1.1.220-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"6-pyruvoyltetrahydropterin 2'-reductase activity","secondary_identifiers":["RHEA:11772"],"synonyms":[{"name":"6-lactoyl-5,6,7,8-tetrahydropterin:NADP+ 2'-oxidoreductase activity","type":"related"},{"name":"6-pyruvoyl tetrahydropterin (2'-oxo)reductase activity","type":"related"},{"name":"6-pyruvoyl-tetrahydropterin 2'-reductase activity","type":"related"},{"name":"6-pyruvoyltetrahydropterin reductase activity","type":"related"},{"name":"6PPH4(2'-oxo) reductase activity","type":"related"},{"name":"pyruvoyl-tetrahydropterin reductase activity","type":"related"}],"termid":"GO:0047028"}


id: GO:0061609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose-1-phosphate = D-glyceraldehyde + dihydroxyacetone phosphate.","definition_xrefs":["GOC:glycolysis","GOC:dph","RHEA:30851","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"fructose-1-phosphate aldolase activity","secondary_identifiers":["Reactome:R-HSA-70342","Reactome:R-HSA-5656438","MetaCyc:RXN-8631"],"termid":"GO:0061609"}


id: FYPO:0007172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the proportion of cells in the population remains viable after entering stationary phase does not change in the presence of micafungin. Normally, wild-type cell populations survive longer in the presence of micafungin than in its absence.","definition_xrefs":["PMID:31601154","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"stationary phase viability unaffected by micafungin","synonyms":[{"name":"chronological lifespan unaffected by micafungin","type":"related"},{"name":"loss of chronological lifespan extension by micafungin","type":"related"},{"name":"loss of stationary phase viability extension in presence of micafungin","type":"exact"}],"termid":"FYPO:0007172"}


id: GO:0045972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone secretion","termid":"GO:0007558"},{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone secretion","termid":"GO:0045443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of juvenile hormone secretion","synonyms":[{"name":"down regulation of juvenile hormone secretion","type":"exact"},{"name":"down-regulation of juvenile hormone secretion","type":"exact"},{"name":"downregulation of juvenile hormone secretion","type":"exact"},{"name":"inhibition of juvenile hormone secretion","type":"narrow"}],"termid":"GO:0045972"}


id: PBO:0091915
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRE1-Like","termid":"PBO:0091915"}


id: PBO:0049440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 17","termid":"PBO:0049440"}


id: PBO:0046188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engulfment and cell motility 2 pseudogene 1","termid":"PBO:0046188"}


id: PBO:0046994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 88 member E","termid":"PBO:0046994"}


id: GO:0030497
data:
  {"annotated_genes":["SJAG_01356","SJAG_02717","SJAG_00630","SJAG_02885","SJAG_01300"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94307,101966,107415],"is_not":false,"summary":null,"term":"GO:0030497"},{"annotations":[85625,88041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[88042,85626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"}]},"cv_name":"biological_process","definition":"The elongation of a fatty acid chain by the sequential addition of two-carbon units.","definition_xrefs":["ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00630":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_02717":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"fatty acid elongation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030497","terms_by_termid":{"GO:0019367":null,"GO:0030497":null,"GO:0034625":null}}


id: PBO:0005296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein, DNAJC11 family","termid":"PBO:0005296"}


id: GO:0010152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The final stages of microgametogenesis after the trinucleate stage has been reached resulting in viable pollen grains.","definition_xrefs":["PMID:11595796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"},{"relation_name":"part_of","term_name":"pollen development","termid":"GO:0009555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen maturation","termid":"GO:0010152"}


id: GO:2000649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transport","termid":"GO:1902305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of sodium ion transmembrane transporter activity","synonyms":[{"name":"regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000649"}


id: PBO:0068824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 62, pseudogene","termid":"PBO:0068824"}


id: PBO:0083935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABA (gamma-aminobutyrate) permease; serves as a GABA transport protein involved in the utilization of GABA as a nitrogen source; catalyzes the transport of putrescine and delta-aminolevulinic acid (ALA); localized to the vacuolar membrane","termid":"PBO:0083935"}


id: GO:0000210
data:
  {"annotated_genes":["SJAG_03091"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101197],"is_not":false,"summary":null,"term":"GO:0000210"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + H2O = AMP + NMN.","definition_xrefs":["RHEA:11800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide phosphatase activity","termid":"GO:0004551"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03091":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"NAD+ diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.22","MetaCyc:NADPYROPHOSPHAT-RXN"],"synonyms":[{"name":"NAD diphosphatase activity","type":"broad"},{"name":"NAD pyrophosphatase activity","type":"broad"},{"name":"NAD(+) pyrophosphatase activity","type":"exact"},{"name":"NAD+ phosphohydrolase activity","type":"exact"},{"name":"NAD+ pyrophosphatase activity","type":"exact"},{"name":"NADP pyrophosphatase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide pyrophosphatase activity","type":"related"}],"termid":"GO:0000210","terms_by_termid":{"GO:0000210":null}}


id: PBO:0085527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S27, no bacterial homolog; RPS27A has a paralog, RPS27B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0085527"}


id: PBO:0041773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 12","termid":"PBO:0041773"}


id: PBO:0089341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 family ATPase Fft2","termid":"PBO:0089341"}


id: GO:0032397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I protein complex to mediate signaling that activates a lymphocyte.","definition_xrefs":["GOC:add","PMID:11858820","PMID:9597134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class I receptor activity","termid":"GO:0032393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"activating MHC class I receptor activity","termid":"GO:0032397"}


id: GO:1904613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2,3,7,8-tetrachlorodibenzodioxine stimulus.","definition_xrefs":["PMID:23196670","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to 2,3,7,8-tetrachlorodibenzodioxine","termid":"GO:1904612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 2,3,7,8-tetrachlorodibenzodioxine","synonyms":[{"name":"cellular response to TCDD","type":"exact"},{"name":"cellular response to dioxin","type":"exact"}],"termid":"GO:1904613"}


id: PBO:0079935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream transcription factor 1","termid":"PBO:0079935"}


id: PBO:0065721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA, SNRPN neighbor","termid":"PBO:0065721"}


id: GO:1905804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to manganese ion.","definition_xrefs":["PMID:23721876","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to manganese ion","termid":"GO:1905802"},{"relation_name":"positively_regulates","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to manganese ion","synonyms":[{"name":"activation of cellular response to manganese","type":"narrow"},{"name":"activation of cellular response to manganese ion","type":"narrow"},{"name":"positive regulation of cellular response to manganese","type":"exact"},{"name":"up regulation of cellular response to manganese","type":"exact"},{"name":"up regulation of cellular response to manganese ion","type":"exact"},{"name":"up-regulation of cellular response to manganese","type":"exact"},{"name":"up-regulation of cellular response to manganese ion","type":"exact"},{"name":"upregulation of cellular response to manganese","type":"exact"},{"name":"upregulation of cellular response to manganese ion","type":"exact"}],"termid":"GO:1905804"}


id: PBO:0038691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 2","termid":"PBO:0038691"}


id: FYPO:0000216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of mitotic DNA replication is abnormal. May result in re-replication of all or part of the genome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"},{"relation_name":"is_a","term_name":"abnormal negative regulation of DNA replication initiation","termid":"FYPO:0004757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal negative regulation of mitotic DNA replication initiation","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation during vegetative growth","type":"exact"},{"name":"mitotic DNA re-replication","type":"related"},{"name":"mitotic DNA rereplication","type":"related"}],"termid":"FYPO:0000216"}


id: PBO:0051693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80B-WBP1 readthrough (NMD candidate)","termid":"PBO:0051693"}


id: GO:0055060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the physical partitioning and separation of a neuroblast into a neuroblast and a ganglion mother cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast fate commitment","termid":"GO:0014017"},{"relation_name":"is_a","term_name":"asymmetric neuroblast division","termid":"GO:0055059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asymmetric neuroblast division resulting in ganglion mother cell formation","termid":"GO:0055060"}


id: GO:0034013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic aldoxime = an aliphatic nitrile + H2O.","definition_xrefs":["RHEA:11316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen-oxygen hydrolyase activity","termid":"GO:0141122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aliphatic aldoxime dehydratase activity","secondary_identifiers":["EC:4.8.1.2","MetaCyc:4.99.1.5-RXN"],"synonyms":[{"name":"aliphatic aldoxime hydro-lyase activity","type":"exact"}],"termid":"GO:0034013"}


id: PBO:0042428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 34, ubiqiutin conjugating enzyme","termid":"PBO:0042428"}


id: PBO:0065285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 1","termid":"PBO:0065285"}


id: GO:0031741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type B gastrin/cholecystokinin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholecystokinin receptor binding","termid":"GO:0031739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type B gastrin/cholecystokinin receptor binding","synonyms":[{"name":"type B gastrin/cholecystokinin receptor ligand","type":"narrow"}],"termid":"GO:0031741"}


id: PBO:0080134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAMP associated protein B and C","termid":"PBO:0080134"}


id: PBO:0090511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional prefoldin chaperone involved protein complex assembly Uri1","termid":"PBO:0090511"}


id: PBO:0049932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematopoietically expressed homeobox","termid":"PBO:0049932"}


id: PBO:0085597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in calcineurin regulation during calcium signaling; has similarity to H. sapiens DSCR1 which is found in the Down Syndrome candidate region","termid":"PBO:0085597"}


id: PBO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methylsterol oxidase (predicted)","termid":"PBO:0000308"}


id: PBO:0000838
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.7.1","termid":"PBO:0000838"}


id: PBO:0066429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like estrogen regulated growth inhibitor","termid":"PBO:0066429"}


id: PBO:0087739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Snt2C complex; physically associates with Snt2p and Rpd3p; along with Snt2p, recruits Rpd3p to a small number of promoters; also colocalizes with Snt2p, independently of Rpd3p, to promoters of stress response genes in response to oxidative stress; contains ATP/GTP-binding site motif A; null mutant exhibits increased cellular volume, large drooping buds with elongated necks; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087739"}


id: FYPO:0005029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of the gamma-tubulin complex to the spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body","termid":"FYPO:0004589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased gamma-tubulin complex localization to mitotic spindle pole body","synonyms":[{"name":"decreased gamma-tubulin complex localisation to mitotic spindle pole body","type":"exact"},{"name":"decreased gamma-tubulin complex localization to mitotic SPB","type":"exact"},{"name":"decreased gamma-tubulin complex localization to mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased gamma-tubulin complex localization to mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"reduced gamma-tubulin complex localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0005029"}


id: GO:0044517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the activity of a vasoactive intestinal polypeptide receptor in a second organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of receptor activity in another organism","termid":"GO:0044504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of vasoactive intestinal polypeptide receptor activity in another organism","synonyms":[{"name":"modulation of VIP receptor activity in other organism","type":"exact"},{"name":"modulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"},{"name":"regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044517"}


id: GO:0001015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nucleolar RNA (snoRNA) from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"},{"relation_name":"is_a","term_name":"sno(s)RNA transcription","termid":"GO:0009302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016074","GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"snoRNA transcription by RNA polymerase II","synonyms":[{"name":"snoRNA transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0001015"}


id: GO:0003404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the formation and shaping of the optic vesicle. This process begins with the specific processes that contribute to the appearance of the vesicle and ends when the vesicle has evaginated. The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"embryonic camera-type eye morphogenesis","termid":"GO:0048596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic vesicle morphogenesis","termid":"GO:0003404"}


id: GO:0120071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any pyloric antrum smooth muscle contraction.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904304"},{"relation_name":"regulates","term_name":"pyloric antrum smooth muscle contraction","termid":"GO:0120065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pyloric antrum smooth muscle contraction","termid":"GO:0120071"}


id: GO:0016419
data:
  {"annotated_genes":["SJAG_04107","SJAG_03972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96846,84252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004314"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a malonyl group to a sulfur atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acyltransferase activity","termid":"GO:0016417"},{"relation_name":"is_a","term_name":"malonyltransferase activity","termid":"GO:0016420"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03972":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"S-malonyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016419","terms_by_termid":{"GO:0004314":null}}


id: PBO:0000521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Rad15","termid":"PBO:0000521"}


id: GO:1903755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of SUMO transferase activity.","definition_xrefs":["GO_REF:0000059","GOC:PARL","GOC:TermGenie","GOC:rl","PMID:19955185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of SUMO transferase activity","termid":"GO:1903182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of SUMO transferase activity","synonyms":[{"name":"activation of SMT3 conjugating enzyme","type":"related"},{"name":"activation of SUMO conjugating enzyme activity","type":"related"},{"name":"activation of SUMO transferase activity","type":"narrow"},{"name":"positive regulation of SMT3 conjugating enzyme","type":"related"},{"name":"positive regulation of SUMO conjugating enzyme activity","type":"related"},{"name":"up regulation of SMT3 conjugating enzyme","type":"related"},{"name":"up regulation of SUMO conjugating enzyme activity","type":"related"},{"name":"up regulation of SUMO transferase activity","type":"exact"},{"name":"up-regulation of SMT3 conjugating enzyme","type":"related"},{"name":"up-regulation of SUMO conjugating enzyme activity","type":"related"},{"name":"up-regulation of SUMO transferase activity","type":"exact"},{"name":"upregulation of SMT3 conjugating enzyme","type":"related"},{"name":"upregulation of SUMO conjugating enzyme activity","type":"related"},{"name":"upregulation of SUMO transferase activity","type":"exact"}],"termid":"GO:1903755"}


id: GO:0043176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an amine, a weakly basic organic compound that contains an amino or a substituted amino group.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"amine binding","termid":"GO:0043176"}


id: GO:0043594
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer membrane around a bacterial endospore, located between the endospore cortex and endospore coat.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer membrane","termid":"GO:0019867"},{"relation_name":"part_of","term_name":"endospore external encapsulating structure","termid":"GO:0043591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"outer endospore membrane","termid":"GO:0043594"}


id: FYPO:0001093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which chromatin binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin binding","termid":"FYPO:0002576"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"abolished chromatin binding","synonyms":[{"name":"abolished chromatin association","type":"exact"},{"name":"chromatin binding abolished","type":"exact"}],"termid":"FYPO:0001093"}


id: PBO:0034367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-develops_in","termid":"PBO:0034367"}


id: GO:0010457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the two centrioles within a centrosome remain tightly paired.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"centriole-centriole cohesion","termid":"GO:0010457"}


id: GO:1903379
data:
  {"annotated_genes":["SJAG_03048","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112774,98485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic chromosome condensation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:9490640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of chromosome condensation","termid":"GO:0060623"},{"relation_name":"regulates","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903379","terms_by_termid":{"GO:1903380":null}}


id: PATO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's vertical distance of a point above or below a reference surface.","definition_xrefs":["Trailillustrated:Trailillustrated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elevation","termid":"PATO:0001687"}


id: GO:0009711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine alkaloids, compounds derived from purine and composed of an N-containing double ring structure.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"purine alkaloid metabolic process","termid":"GO:0046446"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"purine alkaloid biosynthetic process","synonyms":[{"name":"purine alkaloid anabolism","type":"exact"},{"name":"purine alkaloid biosynthesis","type":"exact"},{"name":"purine alkaloid formation","type":"exact"},{"name":"purine alkaloid synthesis","type":"exact"}],"termid":"GO:0009711"}


id: GO:0021535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that will reside in the hindbrain.","definition_xrefs":["GOC:jid","GOC:dph","GOC:cls","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration in hindbrain","termid":"GO:0021535"}


id: GO:0046480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 mono-beta-D-galactosyldiacylglycerol = alpha-D-galactosyl-beta-D-galactosyldiacylglycerol + 1,2-diacylglycerol.","definition_xrefs":["EC:2.4.1.184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactolipid galactosyltransferase activity","secondary_identifiers":["RHEA:15921","MetaCyc:RXN-1226"],"synonyms":[{"name":"3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol:mono-3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol beta-D-galactosyltransferase activity","type":"related"},{"name":"DGDG synthase activity","type":"broad"},{"name":"GGGT activity","type":"related"},{"name":"digalactosyldiacylglycerol synthase activity","type":"broad"},{"name":"galactolipid-galactolipid galactosyltransferase activity","type":"related"},{"name":"galactolipid:galactolipid galactosyltransferase activity","type":"exact"},{"name":"interlipid galactosyltransferase activity","type":"related"}],"termid":"GO:0046480"}


id: PBO:0040224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 1","termid":"PBO:0040224"}


id: PBO:0054240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1622","termid":"PBO:0054240"}


id: PBO:0063616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1","termid":"PBO:0063616"}


id: FYPO:0007913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which organelle localization is normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal organelle localization","termid":"FYPO:0007913"}


id: PBO:0040750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxybutyrate dehydrogenase 2","termid":"PBO:0040750"}


id: PBO:0027783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_threonine_phosphorylation","termid":"PBO:0027783"}


id: PBO:0087194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rpd3L histone deacetylase complex subunit; key transcriptional regulator of early meiotic genes; involved in chromatin remodeling and transcriptional repression via DNA looping; binds URS1 upstream regulatory sequence, represses transcription by recruiting conserved histone deacetylase Rpd3p (through co-repressor Sin3p) and chromatin-remodeling factor Isw2p; couples metabolic responses to nutritional cues with initiation and progression of meiosis","termid":"PBO:0087194"}


id: PR:Q9UUJ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1952.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUJ8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0658 Golgi apparatus membrane protein C1952.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.10c","synonyms":[{"name":"Spom972h-SPAC1952.10c","type":"exact"}],"termid":"PR:Q9UUJ8"}


id: GO:0015128
data:
  {"annotated_genes":["SJAG_04905"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88587],"is_not":false,"summary":null,"term":"GO:0015128"}]},"cv_name":"molecular_function","definition":"Enables the transfer of gluconate from one side of a membrane to the other. Gluconate is the aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonate transmembrane transporter activity","termid":"GO:0042879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"gluconate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-idonate/D-gluconate:hydrogen symporter activity","type":"narrow"}],"termid":"GO:0015128","terms_by_termid":{"GO:0015128":null}}


id: GO:0098946
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endocytic zone membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of presynaptic endocytic zone membrane (obsolete GO:0098946)","synonyms":[{"name":"intrinsic to presynaptic active zone membrane","type":"narrow"}],"termid":"GO:0098946"}


id: PR:O43013
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csi1 gene.","definition_xrefs":["UniProtKB:O43013","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2G2.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.14","synonyms":[{"name":"Spom972h-csi1","type":"exact"}],"termid":"PR:O43013"}


id: PBO:0067347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 444, pseudogene","termid":"PBO:0067347"}


id: PBO:0090675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Hsf1","termid":"PBO:0090675"}


id: PBO:0044994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIAPH1 antisense RNA 1","termid":"PBO:0044994"}


id: GO:0050026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an L-glycol + NAD(P)+ = a 2-hydroxycarbonyl compound + NAD(P)H + H+.","definition_xrefs":["MetaCyc:L-GLYCOL-DEHYDROGENASE-RXN","EC:1.1.1.185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-glycol dehydrogenase activity","synonyms":[{"name":"L-(+)-glycol:NAD(P) oxidoreductase activity","type":"related"},{"name":"L-glycol:NAD(P) dehydrogenase activity","type":"related"},{"name":"L-glycol:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"glycol (nicotinamide adenine dinucleotide (phosphate)) dehydrogenase activity","type":"related"}],"termid":"GO:0050026"}


id: PBO:0012526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_development_of","termid":"PBO:0012526"}


id: PBO:0078802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 19-2","termid":"PBO:0078802"}


id: PBO:0048786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha 15","termid":"PBO:0048786"}


id: GO:0009099
data:
  {"annotated_genes":["SJAG_06635","SJAG_04149","SJAG_00396","SJAG_03985","SJAG_04098"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86799,99401,106532,107189,109357],"is_not":false,"summary":null,"term":"GO:0009099"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of valine, 2-amino-3-methylbutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valine metabolic process","termid":"GO:0006573"},{"relation_name":"is_a","term_name":"branched-chain amino acid biosynthetic process","termid":"GO:0009082"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"valine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:VALSYN-PWY"],"synonyms":[{"name":"valine anabolism","type":"exact"},{"name":"valine biosynthesis","type":"exact"},{"name":"valine formation","type":"exact"},{"name":"valine synthesis","type":"exact"}],"termid":"GO:0009099","terms_by_termid":{"GO:0009099":null}}


id: PBO:0017760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly protein Mug56 (predicted)","termid":"PBO:0017760"}


id: PBO:0080385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 13 homolog C","termid":"PBO:0080385"}


id: PBO:0083063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroorotase; catalyzes the third enzymatic step in the de novo biosynthesis of pyrimidines, converting carbamoyl-L-aspartate into dihydroorotate","termid":"PBO:0083063"}


id: PBO:0026779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_heat","termid":"PBO:0026779"}


id: PBO:0085900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in mitochondrial DNA maintenance; required for slowed DNA synthesis-induced filamentous growth","termid":"PBO:0085900"}


id: PBO:0087351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spindle positioning factor; orients astral microtubules, connecting them to actin cables at the cortex with Bim1p and Myo2, resulting in proper spindle positioning; targeted for StuBL-dependent degradation at kinetochores by Slx5p-Slx8p, ensuring chromosome transmission fidelity and correct spindle positioning; role in karyogamy; localizes to the shmoo tip, the growing bud-tip, the nucleus, the kinetochore, the spindle and microtubules; homolog of adenomatous polyposis coli","termid":"PBO:0087351"}


id: GO:0072330
data:
  {"annotated_genes":["SJAG_03553","SJAG_03632","SJAG_02769","SJAG_02106","SJAG_03313","SJAG_04972","SJAG_01238","SJAG_04107","SJAG_01935","SJAG_03679","SJAG_05200","SJAG_03786","SJAG_03526","SJAG_03130","SJAG_00630","SJAG_00043","SJAG_02796","SJAG_01300","SJAG_04674","SJAG_01946","SJAG_00099","SJAG_04404","SJAG_04988","SJAG_03972","SJAG_01458","SJAG_03943","SJAG_01356","SJAG_02717","SJAG_03198","SJAG_03180","SJAG_00305","SJAG_00673","SJAG_02007","SJAG_04481","SJAG_02885","SJAG_02988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019413"},{"annotations":[75135,110196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[108601,91115,84251,94465,96841,94372,93430,93794,98152,87543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[101966,107415,94307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[85625,88041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[88042,85626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[95483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034276"},{"annotations":[61987,59837,58845,60521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019249"},{"annotations":[108786,93282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[96842,93795,100421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[107354],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[93797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[85020,94837,109472,98855,94841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[94377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042866"},{"annotations":[69266,110498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[107416,99578,88045,101968,85628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00099":null,"SJAG_00305":null,"SJAG_00630":null,"SJAG_00673":null,"SJAG_01238":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01458":null,"SJAG_01935":null,"SJAG_01946":null,"SJAG_02007":null,"SJAG_02106":null,"SJAG_02717":null,"SJAG_02769":null,"SJAG_02796":null,"SJAG_02885":null,"SJAG_02988":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03313":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_03786":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04107":null,"SJAG_04404":null,"SJAG_04481":null,"SJAG_04674":null,"SJAG_04972":null,"SJAG_04988":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"monocarboxylic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"monocarboxylic acid anabolism","type":"exact"},{"name":"monocarboxylic acid biosynthesis","type":"exact"},{"name":"monocarboxylic acid formation","type":"exact"},{"name":"monocarboxylic acid synthesis","type":"exact"}],"termid":"GO:0072330","terms_by_termid":{"GO:0006633":null,"GO:0006636":null,"GO:0009102":null,"GO:0009107":null,"GO:0015940":null,"GO:0019249":null,"GO:0019367":null,"GO:0019413":null,"GO:0030497":null,"GO:0034276":null,"GO:0034625":null,"GO:0042759":null,"GO:0042761":null,"GO:0042866":null,"GO:0045717":null,"GO:1900535":null}}


id: PBO:0055211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2636","termid":"PBO:0055211"}


id: GO:1903787
data:
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id: GO:0005739
data:
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id: GO:1900211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell apoptotic process involved in metanephros development.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10","GOC:TermGenie","GOC:mtg_apoptosis","PMID:17314325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in development","termid":"GO:1904748"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process","termid":"GO:2001053"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process involved in metanephros development","synonyms":[{"name":"regulation of mesenchymal cell apoptosis involved in metanephros development","type":"narrow"}],"termid":"GO:1900211"}


id: PBO:0091720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein,human RPAP3 ortholog","termid":"PBO:0091720"}


id: PBO:0067667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 846, pseudogene","termid":"PBO:0067667"}


id: PBO:0055080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2498","termid":"PBO:0055080"}


id: PBO:0060135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 36","termid":"PBO:0060135"}


id: GO:0004814
data:
  {"annotated_genes":["SJAG_00653"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103312],"is_not":false,"summary":null,"term":"GO:0004814"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).","definition_xrefs":["EC:6.1.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00653":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0140101","GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"arginine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-379993","Reactome:R-HSA-380224","MetaCyc:ARGININE--TRNA-LIGASE-RXN","RHEA:20301"],"synonyms":[{"name":"L-arginine:tRNAArg ligase (AMP-forming)","type":"related"},{"name":"arginine translase activity","type":"related"},{"name":"arginine-tRNA synthetase activity","type":"related"},{"name":"arginyl transfer ribonucleic acid synthetase activity","type":"related"},{"name":"arginyl-tRNA synthetase activity","type":"exact"},{"name":"arginyl-transfer RNA synthetase activity","type":"related"},{"name":"arginyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004814","terms_by_termid":{"GO:0004814":null}}


id: PBO:0001760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Faf1 (predicted)","termid":"PBO:0001760"}


id: GO:0102306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-benzoin + NADP(3-) = benzil + NADPH(4-) + H+.","definition_xrefs":["EC:1.1.1.320","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"benzil reductase [(S)-benzoin-forming] activity","secondary_identifiers":["RHEA:25968","MetaCyc:RXN-12898"],"termid":"GO:0102306"}


id: FYPO:0009098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing mannitol as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002058","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on mannitol carbon source","synonyms":[{"name":"increased growth on mannitol carbon source","type":"broad"},{"name":"increased vegetative cell growth on mannitol carbon source","type":"exact"}],"termid":"FYPO:0009098"}


id: PBO:0085226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p; associates with actin patches on cell cortex; promotes protein-protein interactions essential for endocytosis; binds to and activates Arp2/3 complex in vitro; phosphorylation of Thr-1225 is regulated by MAPK Hog1p in response to osmotic stress; previously thought to be a subunit of poly(A) ribonuclease","termid":"PBO:0085226"}


id: GO:0100025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates cellular amino acid biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular amino acid biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100025)","termid":"GO:0100025"}


id: PBO:0077877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase pseudogene 4","termid":"PBO:0077877"}


id: GO:0034639
data:
  {"annotated_genes":["SJAG_03899"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92137],"is_not":false,"summary":null,"term":"GO:0034639"}]},"cv_name":"molecular_function","definition":"Enables the transfer of an L-amino acid from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03899":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-amino acid efflux transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-amino acid efflux permease activity","type":"exact"},{"name":"L-amino acid export transporter activity","type":"exact"}],"termid":"GO:0034639","terms_by_termid":{"GO:0034639":null}}


id: GO:0018496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dihydroxycyclohexane-1-carboxyl-CoA = 2 H+ + 2 e- + 6-oxo-2-hydroxycyclohexane-1-carboxyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dihydroxycyclohexane-1-carboxyl-CoA dehydrogenase activity (obsolete GO:0018496)","termid":"GO:0018496"}


id: PBO:0080621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 62","termid":"PBO:0080621"}


id: GO:0003284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the septum primum over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septum development","termid":"GO:0003283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"septum primum development","termid":"GO:0003284"}


id: PBO:0068101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 408","termid":"PBO:0068101"}


id: PBO:0085317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 3,5-bisphosphate (PtdIns[3,5]P) phosphatase; required for efficient mating and response to osmotic shock; physically associates with and regulated by Vac14p; contains a SAC1-like domain; homologous to human FIG4, which is associated with CMT4J, a form of Charcot-Marie-Tooth disorder","termid":"PBO:0085317"}


id: FYPO:0000947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a sphere, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"swollen spheroid vegetative cell","termid":"FYPO:0000945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"swollen spherical vegetative cell","synonyms":[{"name":"enlarged spherical vegetative cell","type":"related"},{"name":"enlarged volume spherical vegetative cell","type":"exact"},{"name":"large spherical vegetative cell","type":"related"},{"name":"spherical vegetative cell with increased cell size","type":"related"},{"name":"spherical vegetative cell with increased cell volume","type":"exact"},{"name":"swollen orb during vegetative growth","type":"exact"},{"name":"swollen spherical cell during vegetative growth","type":"exact"},{"name":"swollen spherical vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000947"}


id: PBO:0045391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP10 antisense RNA 2","termid":"PBO:0045391"}


id: GO:0050797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dUMP + NADPH + H+ = dTMP + tetrahydrofolate + NADP+.","definition_xrefs":["EC:2.1.1.148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5,10-methylenetetrahydrofolate-dependent methyltransferase activity","termid":"GO:0042083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"thymidylate synthase (FAD) activity","secondary_identifiers":["KEGG_REACTION:R06613","RHEA:29043","MetaCyc:RXN-8850"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate,FADH2:dUMP C-methyltransferase activity","type":"related"},{"name":"FDTS activity","type":"related"},{"name":"Thy1 activity","type":"exact"},{"name":"ThyX activity","type":"exact"},{"name":"flavin dependent thymidylate synthase activity","type":"related"}],"termid":"GO:0050797"}


id: GO:0034200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glycero-beta-D-manno-heptose 1,7-bisphosphate + H2O = D-glycero-beta-D-manno-heptose 1-phosphate + phosphate.","definition_xrefs":["PMID:11279237","RHEA:28518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase activity","secondary_identifiers":["EC:3.1.3.82","MetaCyc:RXN0-4361"],"synonyms":[{"name":"D,D-heptose 1,7-bisphosphate phosphatase activity","type":"exact"}],"termid":"GO:0034200"}


id: PBO:0025471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-L ortholog Fta1","termid":"PBO:0025471"}


id: PBO:0005595
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOrphology Defective","termid":"PBO:0005595"}


id: PBO:0089168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, involved in nucleocytoplasmic transport Syo2","termid":"PBO:0089168"}


id: GO:2000735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000733"},{"relation_name":"positively_regulates","term_name":"glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","synonyms":[{"name":"positive regulation of GDNF receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"positive regulation of glial cell derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"positive regulation of glial cell line-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"},{"name":"positive regulation of glial cell-derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"positive regulation of glial cell-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"}],"termid":"GO:2000735"}


id: GO:0101017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of firing from a late origin of replication involved in mitotic DNA replication.","definition_xrefs":["PMID:26436827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic DNA replication initiation","termid":"GO:1903466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic DNA replication initiation from late origin","synonyms":[{"name":"regulation of late replication origin firing","type":"exact"}],"termid":"GO:0101017"}


id: PBO:0064546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 8, pseudogene","termid":"PBO:0064546"}


id: PR:C6Y4B3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pga1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4B3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 2 subunit C167.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.09","synonyms":[{"name":"Spom972h-pga1","type":"exact"}],"termid":"PR:C6Y4B3"}


id: PBO:0036156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_glycosylation_during_vegetative_growth","termid":"PBO:0036156"}


id: GO:0034050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell death resulting from activation of endogenous cellular processes after interaction with a symbiont (defined as the smaller of two, or more, organisms engaged in symbiosis, a close interaction encompassing mutualism through parasitism). This can be triggered by direct interaction with the organism, for example, contact with penetrating hyphae of a fungus; or an indirect interaction such as symbiont-secreted molecules.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-induced defense-related programmed cell death","synonyms":[{"name":"host programmed cell death induced by symbiont","type":"exact"},{"name":"programmed cell death induced by symbiont","type":"exact"}],"termid":"GO:0034050"}


id: PBO:0065490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 4","termid":"PBO:0065490"}


id: PBO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silencing DEfective","termid":"PBO:0001847"}


id: PBO:0087266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr kinase involved in transcription and stress response; functions as part of a network of genes in exit from mitosis; localization is cell cycle regulated; activated by Cdc15p during the exit from mitosis; also plays a role in regulating the stability of SWI5 and CLB2 mRNAs; phosphorylates Chs2p to regulate primary septum formation and Hof1p to regulate cytokinesis; DBF2 has a paralog, DBF20, that arose from the whole genome duplication","termid":"PBO:0087266"}


id: PBO:0056958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 20a","termid":"PBO:0056958"}


id: SO:0000288
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fusion gene that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"engineered_gene","termid":"SO:0000280"},{"relation_name":"is_a","term_name":"fusion_gene","termid":"SO:0000287"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_fusion_gene","synonyms":[{"name":"engineered fusion gene","type":"exact"}],"termid":"SO:0000288"}


id: GO:0021898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial commitment of cells whereby the developmental fate of a cell becomes restricted such that it will develop into some type of neuron in the forebrain.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","PMID:12626695","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron fate commitment","termid":"GO:0021877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"}


id: PBO:0085902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in resistance to carboplatin and cisplatin; null mutant displays increase in spontaneous Rad52p foci; contains a lipid-binding domain and binds cardiolipin in a large-scale study","termid":"PBO:0085902"}


id: PBO:0089863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid elongase Elo1","termid":"PBO:0089863"}


id: PBO:0076251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUZ12 pseudogene 2","termid":"PBO:0076251"}


id: PBO:0044185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP synthase 1","termid":"PBO:0044185"}


id: PBO:0036447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex protein phosphotransferase subunit Ppk26 (predicted)","termid":"PBO:0036447"}


id: GO:0033683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that results in the endonucleolytic cleavage of the damaged strand of DNA. The incision occurs at the junction of single-stranded DNA and double-stranded DNA that is formed when the DNA duplex is unwound.","definition_xrefs":["PMID:8631896","GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide-excision repair, DNA incision (obsolete GO:0033683)","synonyms":[{"name":"DNA incision involved in nucleotide-excision repair","type":"exact"},{"name":"nucleic acid cleavage involved in nucleotide-excision repair","type":"exact"}],"termid":"GO:0033683"}


id: PBO:0051280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-13","termid":"PBO:0051280"}


id: PBO:0073281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 2","termid":"PBO:0073281"}


id: MOD:01229
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to an L-iodohistidine.","definition_xrefs":["Unimod:129#H","PubMed:15627961","PubMed:2026710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoiodinated residue","termid":"MOD:00500"},{"relation_name":"is_a","term_name":"halogenated histidine","termid":"MOD:01049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-iodohistidine","synonyms":[{"name":"I1His","type":"exact"},{"name":"Iodination","type":"related"},{"name":"Iodo","type":"related"}],"termid":"MOD:01229"}


id: PBO:0088270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51-b","termid":"PBO:0088270"}


id: PBO:0050394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A/B pseudogene 1","termid":"PBO:0050394"}


id: PBO:0051624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILK associated serine/threonine phosphatase","termid":"PBO:0051624"}


id: PBO:0063145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PATJ crumbs cell polarity complex component","termid":"PBO:0063145"}


id: GO:0060182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the peptide apelin to initiate a change in cell activity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"apelin receptor activity","termid":"GO:0060182"}


id: GO:0120059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of any small intestinal transit process, the migration of ingested material along the length of the small intestine.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of small intestinal transit","termid":"GO:0120057"},{"relation_name":"negatively_regulates","term_name":"small intestinal transit","termid":"GO:0120055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of small intestinal transit","synonyms":[{"name":"negative regulation of small bowel transit","type":"exact"},{"name":"negative regulation of small intestine transit","type":"exact"}],"termid":"GO:0120059"}


id: PBO:0041426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 48","termid":"PBO:0041426"}


id: PBO:0076319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptopodin 2 like","termid":"PBO:0076319"}


id: PBO:0001670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine 5'-triphosphate nucleotidohydrolase (predicted)","termid":"PBO:0001670"}


id: PBO:0045202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB12 pseudogene 1","termid":"PBO:0045202"}


id: FYPO:0006540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which actin cytoskeleton organization is abnormal during a cellular response to pheromone.","definition_xrefs":["GO:0030036","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization","termid":"FYPO:0004803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cytoskeleton organization during cellular response to pheromone","synonyms":[{"name":"abnormal actin cytoskeleton organisation during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0006540"}


id: PR:O14048
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UBX domain-containing protein 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01778","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.15c","secondary_identifiers":["UniProtKB:O14048"],"synonyms":[{"name":"Spom972h-UBXN7","type":"exact"}],"termid":"PR:O14048"}


id: PBO:0071818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 13","termid":"PBO:0071818"}


id: PBO:0085276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal malate dehydrogenase; catalyzes interconversion of malate and oxaloacetate; involved in the glyoxylate cycle; mutation in human homolog MDH2 causes early-onset severe encephalopathy","termid":"PBO:0085276"}


id: PBO:0039766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 1 (Colton blood group)","termid":"PBO:0039766"}


id: PBO:0084864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; contains twin cysteine-x9-cysteine motifs; oxidized by Mia40p during import into mitochondria","termid":"PBO:0084864"}


id: GO:0097496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A blood vessel lumenization process that occurs by blood vessel endothelial cells delaminating and aligning along the inner surface of an existing luminal space, extending the open ended lumen, and joining to other blood vessels to form a complete blood vessel.","definition_xrefs":["PMID:23698350","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel lumenization","termid":"GO:0072554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel lumen ensheathment","termid":"GO:0097496"}


id: PBO:0062701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily E member 2","termid":"PBO:0062701"}


id: GO:0018854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-3-isopropenyl-6-oxoheptanoate + CoA-SH + ATP = H2O + ADP/AMP + mono/diphosphate + (3R)-3-isopropenyl-6-oxoheptanoyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-isopropenyl-6-oxoheptanoyl-CoA synthetase activity (obsolete GO:0018854)","termid":"GO:0018854"}


id: GO:0009090
data:
  {"annotated_genes":["SJAG_00881","SJAG_03152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102074,108064],"is_not":false,"summary":null,"term":"GO:0009090"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of homoserine, alpha-amino-gamma-hydroxybutyric acid.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid biosynthetic process","termid":"GO:0009070"},{"relation_name":"is_a","term_name":"homoserine metabolic process","termid":"GO:0009092"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00881":null,"SJAG_03152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"homoserine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HOMOSERSYN-PWY"],"synonyms":[{"name":"homoserine anabolism","type":"exact"},{"name":"homoserine biosynthesis","type":"exact"},{"name":"homoserine formation","type":"exact"},{"name":"homoserine synthesis","type":"exact"}],"termid":"GO:0009090","terms_by_termid":{"GO:0009090":null}}


id: PBO:0075457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 7","termid":"PBO:0075457"}


id: FYPO:0003077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of autophosphorylation of one or more specific proteins, or of specific protein sites, is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"},{"relation_name":"is_a","term_name":"abnormal protein autophosphorylation during vegetative growth","termid":"FYPO:0003019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased protein autophosphorylation during vegetative growth","synonyms":[{"name":"increased protein autophosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003077"}


id: PBO:0026660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_upon_inositol_starvation","termid":"PBO:0026660"}


id: PBO:0027437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nonsense-mediated_decay","termid":"PBO:0027437"}


id: GO:0050216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + propane-1,2-diol 1-phosphate = H+ + hydroxyacetone phosphate + NADH.","definition_xrefs":["EC:1.1.1.7","RHEA:21584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"propanediol-phosphate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04236","MetaCyc:PROPANEDIOL-PHOSPHATE-DEHYDROGENASE-RXN"],"termid":"GO:0050216"}


id: PBO:0057350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 544b","termid":"PBO:0057350"}


id: PBO:0087469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a TORC1-stimulating GTPase and the EGO/GSE complex; subunit of Gtr1-Gtr2, a GTPase that activates TORC1 in response to amino acid stimulation; subunit of EGO/GSE, a vacuolar/endosomal membrane complex that regulates exit from rapamycin-induced growth arrest and sorting of Gap1p from the endosome to the plasma membrane; involved in phosphate transport and telomeric chromatin silencing; activated by the the Iml1p (GAP) subunit of the SEACIT complex; similar to human RagA and RagB","termid":"PBO:0087469"}


id: PBO:0090771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex beta subunit Apl2","termid":"PBO:0090771"}


id: GO:0051586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of dopamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine uptake involved in synaptic transmission","termid":"GO:0051584"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine uptake involved in synaptic transmission","termid":"GO:0051944"},{"relation_name":"positively_regulates","term_name":"dopamine uptake involved in synaptic transmission","termid":"GO:0051583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of dopamine uptake involved in synaptic transmission","synonyms":[{"name":"activation of dopamine uptake involved in synaptic transmission","type":"narrow"},{"name":"positive regulation of dopamine import involved in synaptic transmission","type":"exact"},{"name":"stimulation of dopamine uptake involved in synaptic transmission","type":"narrow"},{"name":"up regulation of dopamine uptake involved in synaptic transmission","type":"exact"},{"name":"up-regulation of dopamine uptake involved in synaptic transmission","type":"exact"},{"name":"upregulation of dopamine uptake involved in synaptic transmission","type":"exact"}],"termid":"GO:0051586"}


id: FYPO:0006137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1-stearoylglycerophosphocholine (18:0) measured in a cell is higher than normal.","definition_xrefs":["PMID:28667014","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular 1-stearoylglycerophosphocholine (18:0) level","synonyms":[{"name":"increased 1-stearoylglycerophosphocholine (18:0) accumulation","type":"related"},{"name":"increased cellular 1-stearoyl-sn-glycero-3-phosphocholine level","type":"exact"},{"name":"increased cellular 1-stearoylglycerophosphocholine (18:0) level during mitotic cell cycle","type":"related"},{"name":"increased cellular 1-stearoylglycerophosphocholine (18:0) level during vegetative growth","type":"exact"}],"termid":"FYPO:0006137"}


id: PBO:0050353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 56","termid":"PBO:0050353"}


id: PBO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MatE family transporter (predicted)","termid":"PBO:0000139"}


id: PBO:0065104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type II regulatory subunit beta","termid":"PBO:0065104"}


id: PBO:0065720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA 6","termid":"PBO:0065720"}


id: GO:0051568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 4 of the histone.","definition_xrefs":["GOC:ai","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 methylation (obsolete GO:0051568)","synonyms":[{"name":"histone H3 K4 methylation","type":"exact"},{"name":"histone H3K4me","type":"exact"},{"name":"histone lysine H3 K4 methylation","type":"exact"}],"termid":"GO:0051568"}


id: GO:0047030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-hydroxycyclohexanecarboxylate + NAD+ = 4-oxocyclohexanecarboxylate + H+ + NADH.","definition_xrefs":["EC:1.1.1.226","RHEA:17429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxycyclohexanecarboxylate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04307","MetaCyc:1.1.1.226-RXN"],"synonyms":[{"name":"trans-4-hydroxycyclohexanecarboxylate dehydrogenase activity","type":"related"},{"name":"trans-4-hydroxycyclohexanecarboxylate:NAD+ 4-oxidoreductase activity","type":"related"}],"termid":"GO:0047030"}


id: GO:1905437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K4 trimethylation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:27541139"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K4 trimethylation (obsolete GO:1905437)","synonyms":[{"name":"activation of histone H3-K4 trimethylation","type":"narrow"},{"name":"up regulation of histone H3-K4 trimethylation","type":"exact"},{"name":"up-regulation of histone H3-K4 trimethylation","type":"exact"},{"name":"upregulation of histone H3-K4 trimethylation","type":"exact"}],"termid":"GO:1905437"}


id: GO:0045192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of low-density lipoproteins, also known as beta lipoproteins, one of the classes of lipoproteins found in the bloodstream of animals, acting as a carrier for cholesterol and fats.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete low-density lipoprotein catabolic process (obsolete GO:0045192)","synonyms":[{"name":"LDL catabolic process","type":"exact"},{"name":"LDL catabolism","type":"exact"},{"name":"low-density lipoprotein breakdown","type":"exact"},{"name":"low-density lipoprotein catabolic process","type":"exact"},{"name":"low-density lipoprotein catabolism","type":"exact"},{"name":"low-density lipoprotein degradation","type":"exact"}],"termid":"GO:0045192"}


id: PBO:0066119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like family 12","termid":"PBO:0066119"}


id: PBO:0045593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 4 (pseudogene)","termid":"PBO:0045593"}


id: GO:0070190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 1-diphospho-1D-myo-inositol (2,3,4,5,6)pentakisphosphate, and ATP + 1D-myo-inositol hexakisphosphate = ADP + 3-diphospho-1D-myo-inositol (1,2,4,5,6)pentakisphosphate.","definition_xrefs":["GOC:jp","PMID:18981179"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol hexakisphosphate 1-kinase or 3-kinase activity (obsolete GO:0070190)","synonyms":[{"name":"inositol hexakisphosphate 1-kinase or 3-kinase activity","type":"exact"}],"termid":"GO:0070190"}


id: MOD:00644
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with an acetoxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated residue","termid":"MOD:00394"},{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-acetylated residue","synonyms":[{"name":"OAcRes","type":"exact"}],"termid":"MOD:00644"}


id: GO:0080157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving plant-type cell wall organization or biogenesis. Plant-type cell wall organization or biogenesis is a process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellulose- and pectin-containing cell wall.","definition_xrefs":["PMID:20530756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"regulates","term_name":"plant-type cell wall organization or biogenesis","termid":"GO:0071669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"regulation of plant-type cell wall organization or biogenesis","synonyms":[{"name":"regulation of plant-type cell wall organisation or biogenesis","type":"exact"}],"termid":"GO:0080157"}


id: GO:0060612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of adipose tissue over time, from its formation to the mature structure. Adipose tissue is specialized tissue that is used to store fat.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adipose tissue development","synonyms":[{"name":"adipogenesis","type":"related"}],"termid":"GO:0060612"}


id: PBO:0081946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 2","termid":"PBO:0081946"}


id: PBO:0044313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b561 family member D1","termid":"PBO:0044313"}


id: MOD:01425
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks three residues by formation of a pyridinyl ring, such as pyridine-2,5-dicarboxylic acid or 5-aminopiperideine-2,5-dicarboxylic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridinyl ring crosslinked residues","termid":"MOD:01425"}


id: PBO:0039702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APAF1 interacting protein","termid":"PBO:0039702"}


id: PBO:0079844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-13 homolog C","termid":"PBO:0079844"}


id: GO:0120218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A quorum sensing process that is modulated by some interaction with a host cell or organism.","definition_xrefs":["GOC:krc","PMID:11780122","PMID:16630813","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quorum sensing","termid":"GO:0009372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"host interaction involved in quorum sensing","termid":"GO:0120218"}


id: GO:0002860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell mediated cytotoxicity directed against tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002857"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002858"},{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045954"},{"relation_name":"positively_regulates","term_name":"natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","synonyms":[{"name":"activation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"narrow"},{"name":"stimulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"narrow"},{"name":"up regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"up-regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"upregulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"}],"termid":"GO:0002860"}


id: GO:1903124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of thioredoxin peroxidase activity.","definition_xrefs":["GO_REF:0000059","GOC:PARL","GOC:bf","PMID:21850687","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of thioredoxin peroxidase activity","termid":"GO:1903123"},{"relation_name":"is_a","term_name":"negative regulation of peroxidase activity","termid":"GO:2000469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thioredoxin peroxidase activity","synonyms":[{"name":"down regulation of TPx activity","type":"exact"},{"name":"down regulation of TrxPx activity","type":"exact"},{"name":"down regulation of thiol peroxidase activity","type":"exact"},{"name":"down regulation of thioredoxin peroxidase activity","type":"exact"},{"name":"down-regulation of TPx activity","type":"exact"},{"name":"down-regulation of TrxPx activity","type":"exact"},{"name":"down-regulation of thiol peroxidase activity","type":"exact"},{"name":"down-regulation of thioredoxin peroxidase activity","type":"exact"},{"name":"downregulation of TPx activity","type":"exact"},{"name":"downregulation of TrxPx activity","type":"exact"},{"name":"downregulation of thiol peroxidase activity","type":"exact"},{"name":"downregulation of thioredoxin peroxidase activity","type":"exact"},{"name":"inhibition of TPx activity","type":"narrow"},{"name":"inhibition of TrxPx activity","type":"narrow"},{"name":"inhibition of thiol peroxidase activity","type":"narrow"},{"name":"inhibition of thioredoxin peroxidase activity","type":"narrow"},{"name":"negative regulation of TPx activity","type":"exact"},{"name":"negative regulation of TrxPx activity","type":"exact"},{"name":"negative regulation of thiol peroxidase activity","type":"exact"}],"termid":"GO:1903124"}


id: FYPO:0003970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation stops before completing separation of chromosomes, and partially separated DNA masses are connected by one or more bridges formed of chromatin.","definition_xrefs":["PMID:12455694","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete mitotic sister chromatid segregation","termid":"FYPO:0003757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000337","FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"incomplete mitotic sister chromatid segregation, with chromatin bridge","synonyms":[{"name":"incomplete mitotic sister chromatid segregation, with chromatin bridge, during vegetative growth","type":"exact"},{"name":"incomplete mitotic sister chromatid separation, with chromatin bridge","type":"related"},{"name":"incomplete sister chromatid segregation, with chromatin bridge during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003970"}


id: PBO:0048109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-L-fucosidase 1 pseudogene 1","termid":"PBO:0048109"}


id: PATO:0002446
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a shape resembling an anchor.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anchor-shaped","termid":"PATO:0002446"}


id: PBO:0027115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_shmoo_tip","termid":"PBO:0027115"}


id: PBO:0024873
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ERO1","termid":"PBO:0024873"}


id: PBO:0028742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_prophase","termid":"PBO:0028742"}


id: PBO:0067350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 447, pseudogene","termid":"PBO:0067350"}


id: GO:1900300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of laminarabiose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of laminarabiose transport (obsolete GO:1900300)","termid":"GO:1900300"}


id: PBO:0042367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD164 molecule like 2","termid":"PBO:0042367"}


id: FYPO:0000103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to copper ions. Cells stop growing (and may die) at a concentration of copper ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to copper","synonyms":[{"name":"hypersensitive to copper","type":"exact"},{"name":"sensitive to copper during mitotic cell cycle","type":"related"},{"name":"sensitive to copper during vegetative growth","type":"exact"},{"name":"sensitive to copper ions","type":"exact"}],"termid":"FYPO:0000103"}


id: GO:0070453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"regulates","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"regulation of heme biosynthetic process","synonyms":[{"name":"regulation of haem biosynthesis","type":"exact"},{"name":"regulation of haem biosynthetic process","type":"exact"},{"name":"regulation of heme anabolism","type":"exact"},{"name":"regulation of heme biosynthesis","type":"exact"},{"name":"regulation of heme formation","type":"exact"},{"name":"regulation of heme synthesis","type":"exact"}],"termid":"GO:0070453"}


id: PBO:0069052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 298, pseudogene","termid":"PBO:0069052"}


id: PBO:0076893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 47","termid":"PBO:0076893"}


id: GO:2001024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to drug.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to drug","termid":"GO:2001023"},{"relation_name":"negatively_regulates","term_name":"response to xenobiotic stimulus","termid":"GO:0009410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to drug","synonyms":[{"name":"negative regulation of drug resistance","type":"related"},{"name":"negative regulation of drug susceptibility/resistance","type":"related"}],"termid":"GO:2001024"}


id: PBO:0086603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is regulated by Msn2p/Msn4p, indicating a possible role in stress response","termid":"PBO:0086603"}


id: PBO:0070909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 17","termid":"PBO:0070909"}


id: GO:0044695
data:
  {"annotated_genes":["SJAG_02703","SJAG_03302","SJAG_04151","SJAG_01585","SJAG_01657","SJAG_00552"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85112,88728,93935,104097,108911,112487],"is_not":false,"summary":null,"term":"GO:0044695"}]},"cv_name":"cellular_component","definition":"An E3 ubiquitin ligase complex localized to the ER and Golgi membrane. In fission yeast comprises Dsc1, 2, 3 and 4. Involved in the processes of fission yeast sre1 (human SREBP) transcriptional activator proteolytic cleavage, the multivesicular body (MVB) pathway, and a post-endoplasmic reticulum pathway for protein catabolism.","definition_xrefs":["GOC:mah","GOC:vw","PMID:21504829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"organelle membrane","termid":"GO:0031090"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00552":null,"SJAG_01585":null,"SJAG_01657":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_04151":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Dsc E3 ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044695","terms_by_termid":{"GO:0044695":null}}


id: GO:0060674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a blood vessel of the placenta over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","PMID:16916377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"},{"relation_name":"part_of","term_name":"placenta development","termid":"GO:0001890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"placenta blood vessel development","termid":"GO:0060674"}


id: GO:0075191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the host cells digest parts of their own cytoplasm, occurring when the host is on or near its symbiont surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete autophagy of host cells on or near symbiont surface (obsolete GO:0075191)","termid":"GO:0075191"}


id: PBO:0002890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex SMC subunit Smc5","termid":"PBO:0002890"}


id: GO:1900836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of emericellin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900185"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of emericellin biosynthetic process","termid":"GO:1900834"},{"relation_name":"positively_regulates","term_name":"emericellin biosynthetic process","termid":"GO:1900766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of emericellin biosynthetic process","termid":"GO:1900836"}


id: PBO:0002666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress activated MAP kinase interacting protein Sin1","termid":"PBO:0002666"}


id: GO:0001934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"positive regulation of phosphorylation","termid":"GO:0042327"},{"relation_name":"positively_regulates","term_name":"protein phosphorylation","termid":"GO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein phosphorylation","synonyms":[{"name":"activation of protein amino acid phosphorylation","type":"narrow"},{"name":"positive regulation of protein amino acid phosphorylation","type":"exact"},{"name":"stimulation of protein amino acid phosphorylation","type":"narrow"},{"name":"up regulation of protein amino acid phosphorylation","type":"exact"},{"name":"up-regulation of protein amino acid phosphorylation","type":"exact"},{"name":"upregulation of protein amino acid phosphorylation","type":"exact"}],"termid":"GO:0001934"}


id: PBO:0042002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC54 antisense RNA 1","termid":"PBO:0042002"}


id: GO:0046017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase I promoter during mitotic cell cycle (obsolete GO:0046017)","synonyms":[{"name":"mitotic regulation of transcription from Pol I promoter","type":"exact"},{"name":"regulation of transcription from Pol I promoter during mitosis","type":"exact"},{"name":"regulation of transcription from RNA polymerase I promoter during mitosis","type":"exact"}],"termid":"GO:0046017"}


id: PBO:0088512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family zinc finger, PHD-type","termid":"PBO:0088512"}


id: PBO:0000345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE","termid":"PBO:0000345"}


id: PBO:0001980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha accessory factor Mcl1","termid":"PBO:0001980"}


id: GO:0004968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gonadotropin-releasing hormone to initiate a change in cell activity. Gonadotropin-releasing hormone (GnRH) is a peptide hormone responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary. GnRH is synthesized and released by the hypothalamus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"gonadotropin-releasing hormone receptor activity","synonyms":[{"name":"GnRH receptor activity","type":"exact"},{"name":"gonadotrophin-releasing hormone receptor activity","type":"exact"}],"termid":"GO:0004968"}


id: GO:0005836
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses fatty-acyl-CoA synthase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"fatty-acyl-CoA synthase complex","synonyms":[{"name":"fatty acyl CoA synthase complex","type":"exact"}],"termid":"GO:0005836"}


id: GO:1901751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene A4.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"leukotriene A4 metabolic process","synonyms":[{"name":"leukotriene A4 metabolism","type":"exact"}],"termid":"GO:1901751"}


id: PBO:0057224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 380","termid":"PBO:0057224"}


id: GO:0001509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins and small-molecule substrates at Asn-Xaa bonds.","definition_xrefs":["EC:3.4.22.34"],"gene_count":0,"genotype_count":0,"name":"obsolete legumain activity (obsolete GO:0001509)","synonyms":[{"name":"PRSC1 gene product (Homo sapiens)","type":"related"},{"name":"asparaginyl endopeptidase activity","type":"related"},{"name":"bean endopeptidase activity","type":"related"},{"name":"citvac","type":"related"},{"name":"hemoglobinase activity","type":"related"},{"name":"legumain activity","type":"exact"},{"name":"phaseolin activity","type":"related"},{"name":"proteinase B","type":"related"},{"name":"vicilin peptidohydrolase activity","type":"related"}],"termid":"GO:0001509"}


id: PBO:0061682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP107 divergent transcript","termid":"PBO:0061682"}


id: PBO:0090294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [4Fe-4S] cluster assembly and transfer protein Isa1","termid":"PBO:0090294"}


id: GO:0032470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the concentration of calcium ions in the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum calcium ion homeostasis","termid":"GO:0032469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"positive regulation of endoplasmic reticulum calcium ion concentration","synonyms":[{"name":"elevation of ER calcium ion concentration","type":"exact"},{"name":"elevation of calcium ion concentration in endoplasmic reticulum","type":"exact"},{"name":"elevation of endoplasmic reticulum calcium ion concentration","type":"exact"},{"name":"endoplasmic reticulum calcium ion concentration elevation","type":"exact"}],"termid":"GO:0032470"}


id: PBO:0063717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGM5P4 antisense RNA 1","termid":"PBO:0063717"}


id: GO:0050067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + O2 = 5-aminopentanamide + CO2 + H2O.","definition_xrefs":["EC:1.13.12.2","RHEA:14601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"lysine 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R00449","MetaCyc:LYSINE-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"L-lysine-2-monooxygenase activity","type":"related"},{"name":"L-lysine:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"lysine monooxygenase activity","type":"related"},{"name":"lysine oxygenase activity","type":"related"}],"termid":"GO:0050067"}


id: GO:0004723
data:
  {"annotated_genes":["SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109467],"is_not":false,"summary":null,"term":"GO:0004723"},{"annotations":[109468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033192"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: protein serine phosphate + H2O = protein serine + phosphate; and protein threonine phosphate + H2O = protein threonine + phosphate. These reactions require the presence of calcium ions.","definition_xrefs":["GOC:mah","EC:3.1.3.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase activity","termid":"GO:0004722"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0004721","GO:0003824","GO:0003674","GO:0016788","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"calcium-dependent protein serine/threonine phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2025882","GO:0008596"],"synonyms":[{"name":"calcineurin","type":"narrow"},{"name":"calcium-dependent protein serine/threonine phosphatase, intrinsic catalyst activity","type":"exact"}],"termid":"GO:0004723","terms_by_termid":{"GO:0004723":null,"GO:0033192":null}}


id: PBO:0079528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-yW synthesizing protein 1 homolog pseudogene 1","termid":"PBO:0079528"}


id: GO:0010151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Expansion of the chloroplast that usually precedes division.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast organization","termid":"GO:0009658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chloroplast elongation","termid":"GO:0010151"}


id: GO:0008712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-D-glycero-D-manno-heptose = ADP-L-glycero-D-manno-heptose.","definition_xrefs":["EC:5.1.3.20","RHEA:17577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ADP-glyceromanno-heptose 6-epimerase activity","secondary_identifiers":["KEGG_REACTION:R05176","MetaCyc:5.1.3.20-RXN"],"synonyms":[{"name":"ADP-L-glycero-D-manno-heptose 6-epimerase activity","type":"related"},{"name":"ADPglyceromanno-heptose 6-epimerase activity","type":"related"}],"termid":"GO:0008712"}


id: PBO:0079039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-1","termid":"PBO:0079039"}


id: PBO:0075733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 1","termid":"PBO:0075733"}


id: FYPO:0006202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydroxyurea is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA level during cellular response to hydroxyurea","synonyms":[{"name":"normal RNA accumulation during cellular response to hydroxyurea","type":"related"},{"name":"normal RNA level during cellular response to HU","type":"exact"},{"name":"normal RNA level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to hydroxyurea","type":"narrow"},{"name":"normal transcript level during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006202"}


id: GO:0071467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["Wikipedia:PH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pH","termid":"GO:0009268"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to pH","termid":"GO:0071467"}


id: FYPO:0008204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell exhibits randomly misoriented actin and myosin II filaments, eventually forming a regular orthogonal actomyosin contractile ring. Although the onset of filaments assembly is not delayed, the cell takes more time complete the formation of an orthogonal actomyosin contractile ring.","direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of actomyosin contractile ring assembly","termid":"FYPO:0000729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0004803","FYPO:0000631","FYPO:0000032","FYPO:0005447"],"is_obsolete":false,"name":"delayed orthogonal actomyosin contractile ring assembly from randomly oriented actomyosin filaments","termid":"FYPO:0008204"}


id: PBO:0054523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1923","termid":"PBO:0054523"}


id: GO:0001510
data:
  {"annotated_genes":["SJAG_02377","SJAG_04367","SJAG_03289","SJAG_01314","SJAG_04649","SJAG_00886","SJAG_00325","SJAG_02386","SJAG_04181","SJAG_03332","SJAG_03410","SJAG_04993","SJAG_05249","SJAG_03877","SJAG_04034","SJAG_02281","SJAG_01958","SJAG_02637","SJAG_00499","SJAG_02417","SJAG_00722","SJAG_03367","SJAG_03773","SJAG_04890","SJAG_04736","SJAG_02042","SJAG_05334","SJAG_00943","SJAG_01261","SJAG_04735","SJAG_02350","SJAG_03008","SJAG_01375","SJAG_04680","SJAG_04848","SJAG_02821","SJAG_04453","SJAG_02302","SJAG_01269","SJAG_03901","SJAG_00744","SJAG_00255","SJAG_03713","SJAG_02099","SJAG_03016","SJAG_02352","SJAG_02024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036261"},{"annotations":[97479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[59663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106005"},{"annotations":[92327,91006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"},{"annotations":[91729,109715,87424,112298,91294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070475"},{"annotations":[94960,105194,63703,63106,64975,59131,94516,85752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031167"},{"annotations":[90233,94894,104191,106296,107440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000452"},{"annotations":[58323,111798,115046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106004"},{"annotations":[102857,106255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106217"},{"annotations":[101864,86568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002946"},{"annotations":[102013,90804,87048,104573,90030,92328,108247,88893,94180,98992,114037,110915,86569,94187,84710,93959,97071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030488"},{"annotations":[95507,97480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002939"},{"annotations":[103364,100240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002940"},{"annotations":[110916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002128"},{"annotations":[90031,84399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[93960,98993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"Posttranscriptional addition of a methyl group to either a nucleotide or 2'-O ribose in a polyribonucleotide. Usually uses S-adenosylmethionine as a cofactor.","definition_xrefs":["GOC:hjd","PMID:21823225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"},{"relation_name":"is_a","term_name":"macromolecule methylation","termid":"GO:0043414"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00325":null,"SJAG_00499":null,"SJAG_00722":null,"SJAG_00744":null,"SJAG_00886":null,"SJAG_00943":null,"SJAG_01261":null,"SJAG_01269":null,"SJAG_01314":null,"SJAG_01375":null,"SJAG_01958":null,"SJAG_02024":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02281":null,"SJAG_02302":null,"SJAG_02350":null,"SJAG_02352":null,"SJAG_02377":null,"SJAG_02386":null,"SJAG_02417":null,"SJAG_02637":null,"SJAG_02821":null,"SJAG_03008":null,"SJAG_03016":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_03367":null,"SJAG_03410":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03877":null,"SJAG_03901":null,"SJAG_04034":null,"SJAG_04181":null,"SJAG_04367":null,"SJAG_04453":null,"SJAG_04649":null,"SJAG_04680":null,"SJAG_04735":null,"SJAG_04736":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_04993":null,"SJAG_05249":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA methylation","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0001510","terms_by_termid":{"GO:0000452":null,"GO:0002127":null,"GO:0002128":null,"GO:0002130":null,"GO:0002939":null,"GO:0002940":null,"GO:0002946":null,"GO:0030488":null,"GO:0031167":null,"GO:0036261":null,"GO:0070475":null,"GO:0070476":null,"GO:0070901":null,"GO:0106004":null,"GO:0106005":null,"GO:0106217":null}}


id: GO:0102330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + a palmitoyl-[acp] = 1-heptadecene + 2 carbon dioxide + coenzyme A + a holo-[acyl-carrier protein].","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"palmitoyl-[acp] elongase/decarboxylase activity","secondary_identifiers":["MetaCyc:RXN-13258"],"termid":"GO:0102330"}


id: PBO:0029528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phytochelatin_absent_from_cell","termid":"PBO:0029528"}


id: PBO:0004399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27/L28","termid":"PBO:0004399"}


id: GO:0048477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell. Examples of this process are found in Mus musculus and Drosophila melanogaster.","definition_xrefs":["GOC:pr","GOC:kmv","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell development","termid":"GO:0007281"},{"relation_name":"is_a","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oogenesis","secondary_identifiers":["Wikipedia:Oogenesis","GO:0009993","GO:0048157"],"synonyms":[{"name":"ovum development","type":"exact"}],"termid":"GO:0048477"}


id: GO:0004132
data:
  {"annotated_genes":["SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104476],"is_not":false,"summary":null,"term":"GO:0004132"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dCMP + H2O = dUMP + NH3.","definition_xrefs":["EC:3.5.4.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"dCMP deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73596","RHEA:22924","MetaCyc:DCMP-DEAMINASE-RXN"],"synonyms":[{"name":"dCMP aminohydrolase activity","type":"related"},{"name":"deoxy-CMP-deaminase activity","type":"related"},{"name":"deoxycytidine monophosphate deaminase activity","type":"related"},{"name":"deoxycytidine-5'-monophosphate aminohydrolase activity","type":"related"},{"name":"deoxycytidine-5'-phosphate deaminase activity","type":"related"},{"name":"deoxycytidylate aminohydrolase activity","type":"related"},{"name":"deoxycytidylate deaminase activity","type":"related"}],"termid":"GO:0004132","terms_by_termid":{"GO:0004132":null}}


id: PBO:0004555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit Rpr2 (predicted)","termid":"PBO:0004555"}


id: GO:0140905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R-CH + a halogen + H2O2 = R-C-halogen + H2O.","definition_xrefs":["PMID:28466644","PMID:34368824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"},{"relation_name":"is_a","term_name":"halogenase activity","termid":"GO:0140906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"haloperoxidase activity","termid":"GO:0140905"}


id: PBO:0092036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNase P RNA","termid":"PBO:0092036"}


id: GO:0009097
data:
  {"annotated_genes":["SJAG_04098","SJAG_06635","SJAG_00830","SJAG_00107","SJAG_04149","SJAG_03985","SJAG_00234","SJAG_00396"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83753,86797,99399,99882,104413,106530,107187,109355,111870],"is_not":false,"summary":null,"term":"GO:0009097"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoleucine, (2R*,3R*)-2-amino-3-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoleucine metabolic process","termid":"GO:0006549"},{"relation_name":"is_a","term_name":"branched-chain amino acid biosynthetic process","termid":"GO:0009082"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00234":null,"SJAG_00396":null,"SJAG_00830":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"isoleucine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ILEUSYN-PWY"],"synonyms":[{"name":"isoleucine anabolism","type":"exact"},{"name":"isoleucine biosynthesis","type":"exact"},{"name":"isoleucine formation","type":"exact"},{"name":"isoleucine synthesis","type":"exact"}],"termid":"GO:0009097","terms_by_termid":{"GO:0009097":null}}


id: GO:0044773
data:
  {"annotated_genes":["SJAG_01429","SJAG_02771","SJAG_03048","SJAG_03720","SJAG_03026","SJAG_02563","SJAG_04287","SJAG_01873","SJAG_03898","SJAG_00429","SJAG_01605","SJAG_01855","SJAG_00364","SJAG_03160","SJAG_01708","SJAG_01146","SJAG_04140","SJAG_00640","SJAG_04332","SJAG_04280","SJAG_04671","SJAG_01677","SJAG_02026","SJAG_00486","SJAG_00327","SJAG_01680","SJAG_01044","SJAG_02576","SJAG_02266","SJAG_01205","SJAG_03942","SJAG_02098","SJAG_01084","SJAG_00169","SJAG_00623","SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78945,87891,89662,90043,95290,98464,102705,105412,107290,110354,110560,112098,112329,113782],"is_not":false,"summary":null,"term":"GO:0044773"},{"annotations":[87410,105771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[107824,110355,87534,102707,113105,113783,87892,105414,86330,96637,84681,97153,90046,85244,95458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[102708,85245,85289,92122,86557,95292,112158,108132,113187,84682,97622,90646,107825,88623,95459,98466,87535,103767,96959,112157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signal transduction process involved in mitotic DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage checkpoint signaling","termid":"GO:0000077"},{"relation_name":"is_a","term_name":"mitotic DNA integrity checkpoint signaling","termid":"GO:0044774"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01044":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mitotic DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1902402"],"synonyms":[{"name":"intracellular signal transduction pathway involved in mitotic DNA damage checkpoint","type":"narrow"},{"name":"intracellular signaling cascade involved in mitotic DNA damage checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in mitotic DNA damage checkpoint","type":"related"},{"name":"mitotic DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic DNA damage checkpoint","type":"exact"}],"termid":"GO:0044773","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0044773":null}}


id: PATO:0001089
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001089 elasticity value (obsolete PATO:0001089)","termid":"PATO:0001089"}


id: PBO:0049446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucoside xylosyltransferase 1","termid":"PBO:0049446"}


id: PBO:0109284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylitol dehydrogenase","termid":"PBO:0109284"}


id: GO:1900686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gerfelin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"gerfelin biosynthetic process","termid":"GO:1900578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of gerfelin biosynthetic process","synonyms":[{"name":"regulation of gerfelin anabolism","type":"exact"},{"name":"regulation of gerfelin biosynthesis","type":"exact"},{"name":"regulation of gerfelin formation","type":"exact"},{"name":"regulation of gerfelin synthesis","type":"exact"}],"termid":"GO:1900686"}


id: PBO:0069680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 957, pseudogene","termid":"PBO:0069680"}


id: PBO:0065364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate stem cell antigen","termid":"PBO:0065364"}


id: PBO:0060041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 29","termid":"PBO:0060041"}


id: PR:Q9UT96
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC323.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C323.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.03c","synonyms":[{"name":"Spom972h-SPAC323.03c","type":"exact"}],"termid":"PR:Q9UT96"}


id: GO:0050845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of teichuronic acid, a polymer containing chains of uronic acids and N-acetylglucosamine found in the cell wall, membrane or capsule of Gram-positive bacteria.","definition_xrefs":["ISBN:0815108893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid biosynthetic process","termid":"GO:0016053"},{"relation_name":"is_a","term_name":"cell wall macromolecule biosynthetic process","termid":"GO:0044038"},{"relation_name":"is_a","term_name":"teichuronic acid metabolic process","termid":"GO:0050846"},{"relation_name":"part_of","term_name":"peptidoglycan-based cell wall biogenesis","termid":"GO:0009273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085","GO:0044281"],"is_obsolete":false,"name":"teichuronic acid biosynthetic process","synonyms":[{"name":"teichuronic acid anabolism","type":"exact"},{"name":"teichuronic acid biosynthesis","type":"exact"},{"name":"teichuronic acid formation","type":"exact"},{"name":"teichuronic acid synthesis","type":"exact"}],"termid":"GO:0050845"}


id: PBO:0041249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 159","termid":"PBO:0041249"}


id: GO:1902415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA binding.","definition_xrefs":["GOC:rb","PMID:22890846","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA binding","termid":"GO:1905214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA binding","termid":"GO:1902415"}


id: PBO:0073107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sidekick cell adhesion molecule 2","termid":"PBO:0073107"}


id: PBO:0067306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 392, pseudogene","termid":"PBO:0067306"}


id: PBO:0076922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor CP2","termid":"PBO:0076922"}


id: GO:0033716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: adenosine + 2 O2 = 9-riburonosyladenine + 2 hydrogen peroxide.","definition_xrefs":["EC:1.1.3.39","RHEA:15489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nucleoside oxidase (hydrogen peroxide-forming) activity","secondary_identifiers":["MetaCyc:1.1.3.39-RXN"],"synonyms":[{"name":"nucleoside:oxygen 5'-oxidoreductase (hydrogen peroxide-forming) activity","type":"related"}],"termid":"GO:0033716"}


id: PBO:0059310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L51 pseudogene 1","termid":"PBO:0059310"}


id: GO:0070197
data:
  {"annotated_genes":["SJAG_01777","SJAG_01263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85887,102033],"is_not":false,"summary":null,"term":"GO:0070197"}]},"cv_name":"biological_process","definition":"The meiotic cell cycle process in which physical connections are formed between telomeric heterochromatin and the nuclear envelope, facilitating bouquet formation.","definition_xrefs":["GOC:vw","GOC:pr","GOC:jp","PMID:18818742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic telomere tethering at nuclear periphery","termid":"GO:0044821"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01263":null,"SJAG_01777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013","GO:0051179"],"is_obsolete":false,"name":"meiotic attachment of telomere to nuclear envelope","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of telomeres to nuclear envelope","type":"broad"},{"name":"attachment of telomeric chromatin to nuclear envelope","type":"broad"}],"termid":"GO:0070197","terms_by_termid":{"GO:0070197":null}}


id: GO:0106291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + 2 O2 = H+ + NAD+ + 2 superoxide.","definition_xrefs":["RHEA:63184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superoxide-generating NAD(P)H oxidase activity","termid":"GO:0016175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"superoxide-generating NADH oxidase activity","termid":"GO:0106291"}


id: PBO:0036502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin Cdc31","termid":"PBO:0036502"}


id: PBO:0056931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase pseudogene 3","termid":"PBO:0056931"}


id: PBO:0066150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 6","termid":"PBO:0066150"}


id: PBO:0079182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 11, pseudogene","termid":"PBO:0079182"}


id: PBO:0066067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RARA antisense RNA 1","termid":"PBO:0066067"}


id: GO:0039694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a viral RNA genome.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral genome replication","termid":"GO:0019079"},{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral RNA genome replication","termid":"GO:0039694"}


id: PBO:0089246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ThrE amino acid transmembrane transporter family protein","termid":"PBO:0089246"}


id: PBO:0081136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP30 zinc finger protein","termid":"PBO:0081136"}


id: GO:1903181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dopamine biosynthetic process.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","PMID:19703902","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of dopamine metabolic process","termid":"GO:0045964"},{"relation_name":"is_a","term_name":"regulation of dopamine biosynthetic process","termid":"GO:1903179"},{"relation_name":"positively_regulates","term_name":"dopamine biosynthetic process","termid":"GO:0042416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine biosynthetic process","synonyms":[{"name":"activation of dopamine anabolism","type":"narrow"},{"name":"activation of dopamine biosynthesis","type":"narrow"},{"name":"activation of dopamine biosynthetic process","type":"narrow"},{"name":"activation of dopamine formation","type":"narrow"},{"name":"activation of dopamine synthesis","type":"narrow"},{"name":"positive regulation of dopamine anabolism","type":"exact"},{"name":"positive regulation of dopamine biosynthesis","type":"exact"},{"name":"positive regulation of dopamine formation","type":"exact"},{"name":"positive regulation of dopamine synthesis","type":"exact"},{"name":"up regulation of dopamine anabolism","type":"exact"},{"name":"up regulation of dopamine biosynthesis","type":"exact"},{"name":"up regulation of dopamine biosynthetic process","type":"exact"},{"name":"up regulation of dopamine formation","type":"exact"},{"name":"up regulation of dopamine synthesis","type":"exact"},{"name":"up-regulation of dopamine anabolism","type":"exact"},{"name":"up-regulation of dopamine biosynthesis","type":"exact"},{"name":"up-regulation of dopamine biosynthetic process","type":"exact"},{"name":"up-regulation of dopamine formation","type":"exact"},{"name":"up-regulation of dopamine synthesis","type":"exact"},{"name":"upregulation of dopamine anabolism","type":"exact"},{"name":"upregulation of dopamine biosynthesis","type":"exact"},{"name":"upregulation of dopamine biosynthetic process","type":"exact"},{"name":"upregulation of dopamine formation","type":"exact"},{"name":"upregulation of dopamine synthesis","type":"exact"}],"termid":"GO:1903181"}


id: PBO:0061329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B7","termid":"PBO:0061329"}


id: PBO:0062157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily H member 6B pseudogene","termid":"PBO:0062157"}


id: PBO:0078866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 1","termid":"PBO:0078866"}


id: GO:0042452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of deoxyguanosine, a nucleoside consisting of the base guanine and the sugar deoxyribose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyguanosine metabolic process","termid":"GO:0042453"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside biosynthetic process","termid":"GO:0046123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxyguanosine biosynthetic process","synonyms":[{"name":"deoxyguanosine anabolism","type":"exact"},{"name":"deoxyguanosine biosynthesis","type":"exact"},{"name":"deoxyguanosine formation","type":"exact"},{"name":"deoxyguanosine synthesis","type":"exact"}],"termid":"GO:0042452"}


id: PBO:0050650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class A member 6, pseudogene","termid":"PBO:0050650"}


id: PBO:0040440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP8B1 antisense RNA 1","termid":"PBO:0040440"}


id: GO:0072490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving toluene, methylbenzene (formula C7H8), or any of its derivatives.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene-containing compound metabolic process","synonyms":[{"name":"toluene and derivative metabolic process","type":"exact"},{"name":"toluene-containing compound metabolism","type":"exact"}],"termid":"GO:0072490"}


id: PBO:0070517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 16","termid":"PBO:0070517"}


id: PBO:0071006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 8","termid":"PBO:0071006"}


id: PBO:0057601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 938","termid":"PBO:0057601"}


id: FYPO:0000335
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic 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id: PBO:0059888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 11","termid":"PBO:0059888"}


id: PBO:0017607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit, WD repeat protein Swd22","termid":"PBO:0017607"}


id: PBO:0002763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR90","termid":"PBO:0002763"}


id: PBO:0084776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein of unknown function; predicted to have 4 transmembrane segments; import is mediated by Tom70p and Mim1p; interacts genetically with a cdc4 mutation; SCM4 has a paralog, ATG33, that arose from the whole genome duplication","termid":"PBO:0084776"}


id: GO:0035229
data:
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id: PBO:0071082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 84","termid":"PBO:0071082"}


id: GO:0005702
data:
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id: GO:0180010
data:
  {"annotated_genes":["SJAG_03226","SJAG_03500","SJAG_01791","SJAG_03126","SJAG_00527","SJAG_02551","SJAG_04942","SJAG_02037","SJAG_03233","SJAG_04587","SJAG_02865","SJAG_00435","SJAG_01175","SJAG_02720","SJAG_00961","SJAG_04022","SJAG_02668","SJAG_03624","SJAG_01599","SJAG_01412","SJAG_03594","SJAG_03853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83773,84522,86737,88919,89024,89542,89564,93301,94248,95195,95725,96402,100788,100825,101069,105914,107392,107666,108055,109671,111385,114283],"is_not":false,"summary":null,"term":"GO:0180010"}]},"cv_name":"biological_process","definition":"Any process involved in transcription termination-coupled 3' processing of RNA polymerase II mRNA transcripts by the 3' end cleavage and addition of a poly(A) tail.","definition_xrefs":["PMID:31499460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"},{"relation_name":"is_a","term_name":"co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway","termid":"GO:0180012"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00435":null,"SJAG_00527":null,"SJAG_00961":null,"SJAG_01175":null,"SJAG_01412":null,"SJAG_01599":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_02551":null,"SJAG_02668":null,"SJAG_02720":null,"SJAG_02865":null,"SJAG_03126":null,"SJAG_03226":null,"SJAG_03233":null,"SJAG_03500":null,"SJAG_03594":null,"SJAG_03624":null,"SJAG_03853":null,"SJAG_04022":null,"SJAG_04587":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cotranscriptional 3' processing of RNA polymerase II mRNA transcripts","type":"exact"},{"name":"mRNA polyadenylation","type":"related"}],"termid":"GO:0180010","terms_by_termid":{"GO:0180010":null}}


id: GO:0035219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the prothoracic disc over time, from its initial formation through to its metamorphosis to form the adult humerous and anterior spiracle.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prothoracic disc development","termid":"GO:0035219"}


id: PBO:0069429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 694, pseudogene","termid":"PBO:0069429"}


id: PBO:0088520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, 2-oxoadipate/2-oxoglutarate","termid":"PBO:0088520"}


id: PBO:0057319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518f","termid":"PBO:0057319"}


id: GO:0047662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4(or 2)-aminobenzoate = aniline + CO2.","definition_xrefs":["EC:4.1.1.24","MetaCyc:AMINOBENZOATE-DECARBOXYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aminobenzoate decarboxylase activity","secondary_identifiers":["RHEA:24200"],"synonyms":[{"name":"aminobenzoate carboxy-lyase (aniline-forming)","type":"related"},{"name":"aminobenzoate carboxy-lyase activity","type":"related"}],"termid":"GO:0047662"}


id: PR:Q10346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F12.04c gene.","definition_xrefs":["UniProtKB:Q10346","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F12.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.04c","synonyms":[{"name":"Spom972h-SPAC1F12.04c","type":"exact"}],"termid":"PR:Q10346"}


id: PBO:0028869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_snoRNA_level","termid":"PBO:0028869"}


id: PBO:0091260
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae TUP1","termid":"PBO:0091260"}


id: PBO:0039713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A5","termid":"PBO:0039713"}


id: GO:0010278
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein transport machinery of the chloroplast outer membrane that contains at least three components Toc159, Toc75 and Toc34, interacts with precursor proteins which are imported into the chloroplast in a GTP dependant manner.","definition_xrefs":["PMID:11299338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast outer membrane","termid":"GO:0009707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast outer membrane translocon","termid":"GO:0010278"}


id: PBO:0039150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK3 pseudogene 5","termid":"PBO:0039150"}


id: PBO:0029526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_elongated_cell","termid":"PBO:0029526"}


id: GO:1904965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vitamin E biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:20823244","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"regulates","term_name":"vitamin E biosynthetic process","termid":"GO:0010189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of vitamin E biosynthetic process","synonyms":[{"name":"regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"regulation of tocopherol biosynthesis","type":"exact"},{"name":"regulation of tocopherol biosynthetic process","type":"exact"},{"name":"regulation of vitamin E anabolism","type":"exact"},{"name":"regulation of vitamin E biosynthesis","type":"exact"},{"name":"regulation of vitamin E formation","type":"exact"},{"name":"regulation of vitamin E synthesis","type":"exact"}],"termid":"GO:1904965"}


id: PBO:0091073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidylyltransferase","termid":"PBO:0091073"}


id: GO:0071969
data:
  {"annotated_genes":["SJAG_04666","SJAG_05285","SJAG_00218","SJAG_02222","SJAG_00876","SJAG_01288","SJAG_04771","SJAG_03587","SJAG_01290","SJAG_04483","SJAG_01835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[87684,102186,105399,84204,109267,87694,103876,111909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[88516,83651],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of fungi.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0034407"},{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan metabolic process","termid":"GO:0070879"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975","GO:0044085"],"is_obsolete":false,"name":"fungal-type cell wall (1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall 1,3-beta-D-glucan metabolic process","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan metabolism","type":"exact"},{"name":"fungal-type cell wall beta-1,3 glucan metabolic process","type":"exact"},{"name":"fungal-type cell wall beta-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0071969","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0140748":null}}


id: PBO:0042790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 164 pseudogene 1","termid":"PBO:0042790"}


id: PBO:0091431
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3 kb of 36 amino acid repeat","termid":"PBO:0091431"}


id: GO:0050981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an electrical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"},{"relation_name":"is_a","term_name":"response to electrical stimulus","termid":"GO:0051602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus","termid":"GO:0050981"}


id: PBO:0059056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modulator of apoptosis 1","termid":"PBO:0059056"}


id: PBO:0001476
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.99.7","termid":"PBO:0001476"}


id: PBO:0041334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 common eliminated region 1","termid":"PBO:0041334"}


id: PBO:0083095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage-dependent checkpoint protein; required for cell-cycle arrest in G1/S, intra-S, and G2/M, plays a role in postreplication repair (PRR) pathway; transmits checkpoint signal by activating Rad53p and Chk1p; protects double-strand breaks from premature resection; multiple cyclin dependent kinase consensus sites and the C-terminal BRCT domain contribute to DNA damage checkpoint activation; Rad9p Chk1 Activating Domain (CAD) is phosphorylated at multiple sites by Cdc28p/Clb2p","termid":"PBO:0083095"}


id: GO:0005180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide hormone (obsolete GO:0005180)","synonyms":[{"name":"peptide hormone","type":"exact"}],"termid":"GO:0005180"}


id: PR:O94290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf29 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component ist3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.05c","synonyms":[{"name":"RNA-binding protein cwf29 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cwf29","type":"exact"},{"name":"complexed with cdc5 protein 29 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94290"}


id: PBO:0072894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol-C4-methyl oxidase pseudogene","termid":"PBO:0072894"}


id: GO:0034842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: thiophene-2-carboxylate + ATP + CoASH = thiophene-2-carboxyl-CoA + AMP + PPi.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete thiophene-2-carboxylate-CoA ligase activity (obsolete GO:0034842)","termid":"GO:0034842"}


id: GO:0010118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of opening or closing of stomata, which is directly related to the stomatal conductance (measuring rate of passage of either water vapor or carbon dioxide (CO2) through stomata).","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal movement","termid":"GO:0010118"}


id: GO:0050499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a NAD(P)+ to NAD(P)H.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with NAD(P)+ as acceptor","secondary_identifiers":["EC:1.20.1.-"],"termid":"GO:0050499"}


id: PBO:0028753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_alpha-glucan_level_during_cellular_response_to_calcium_starvation","termid":"PBO:0028753"}


id: GO:2000495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"cell proliferation involved in compound eye morphogenesis","termid":"GO:0035736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in compound eye morphogenesis","termid":"GO:2000495"}


id: PBO:0051503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IK cytokine","termid":"PBO:0051503"}


id: FYPO:0003832
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[115627,115624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle progression is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null,"SJAG_04883":null},"genotype_count":3,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cycle","references_by_uniquename":{"PMID:36695178":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04883","SJAG_01355","SJAG_00601"],"single_locus_genotype_uniquenames":["rip1delta","ptp4delta","cox6delta"],"synonyms":[{"name":"cell cycle progression: normal","type":"related"},{"name":"normal cell cycle progression","type":"exact"},{"name":"normal cell-division cycle","type":"exact"}],"termid":"FYPO:0003832","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000590":null,"FYPO:0001007":null}}


id: PBO:0047614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen C domain containing 1","termid":"PBO:0047614"}


id: PBO:0077481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 201","termid":"PBO:0077481"}


id: GO:0042921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a glucocorticoid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated corticosteroid signaling pathway","termid":"GO:0031958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nuclear receptor-mediated glucocorticoid signaling pathway","synonyms":[{"name":"glucocorticoid receptor signaling pathway","type":"broad"},{"name":"glucocorticoid receptor signalling pathway","type":"broad"},{"name":"intracellular glucocorticoid receptor signaling pathway","type":"exact"}],"termid":"GO:0042921"}


id: PBO:0041005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC-1 related complex subunit 7","termid":"PBO:0041005"}


id: PBO:0026941
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiotic_interphase","termid":"PBO:0026941"}


id: PBO:0054651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2056","termid":"PBO:0054651"}


id: PBO:0001480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA-sterol acyltransferase Are1 (predicted)","termid":"PBO:0001480"}


id: GO:0086063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a voltage-gated channel through the plasma membrane of an SA node cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated sodium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated sodium channel activity involved in SA node cell action potential","synonyms":[{"name":"voltage-gated sodium channel activity involved in SA node cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated sodium channel activity involved in SAN cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated sodium channel activity involved in sinoatrial node cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated sodium channel activity involved in sinus node cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:0086063"}


id: PBO:0070190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 110 pseudogene","termid":"PBO:0070190"}


id: GO:1901294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of DNA binding that results in negative regulation of a SREBP signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:22017871"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by negative regulation of DNA binding (obsolete GO:1901294)","synonyms":[{"name":"inhibition of SREBP-dependent transcription by blocking DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by down regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by down-regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by downregulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by inhibition of DNA binding","type":"narrow"},{"name":"negative regulation of SREBP-mediated signaling pathway by down regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by down-regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by downregulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by inhibition of DNA binding","type":"narrow"},{"name":"negative regulation of SREBP-mediated signaling pathway by negative regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by down regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by down-regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by downregulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by inhibition of DNA binding","type":"narrow"},{"name":"negative regulation of SREBP-mediated signalling pathway by negative regulation of DNA binding","type":"exact"}],"termid":"GO:1901294"}


id: GO:1905558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic nuclear envelope disassembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18765790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of mitotic nuclear envelope disassembly","termid":"GO:1905557"},{"relation_name":"negatively_regulates","term_name":"mitotic nuclear membrane disassembly","termid":"GO:0007077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0061024"],"is_obsolete":false,"name":"negative regulation of mitotic nuclear envelope disassembly","synonyms":[{"name":"down regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"down regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"down regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"down regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"downregulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"downregulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"downregulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"downregulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"inhibition of mitotic nuclear envelope breakdown","type":"narrow"},{"name":"inhibition of mitotic nuclear envelope catabolism","type":"narrow"},{"name":"inhibition of mitotic nuclear envelope degradation","type":"narrow"},{"name":"inhibition of mitotic nuclear envelope disassembly","type":"narrow"},{"name":"negative regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"negative regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"negative regulation of mitotic nuclear envelope degradation","type":"exact"}],"termid":"GO:1905558"}


id: GO:1990093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The negative regulation of the receptor clustering process in which N-methyl-D-aspartate (NMDA) receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["PMID:18442977"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of N-methyl-D-aspartate receptor clustering (obsolete GO:1990093)","synonyms":[{"name":"negative regulation of N-methyl-D-aspartate receptor clustering","type":"exact"},{"name":"negative regulation of NMDA receptor clustering","type":"exact"}],"termid":"GO:1990093"}


id: PBO:0051238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-46-1 (pseudogene)","termid":"PBO:0051238"}


id: GO:0072566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 1 production","synonyms":[{"name":"CXCL1 production","type":"exact"},{"name":"KC production","type":"exact"},{"name":"SCYB1 production","type":"exact"},{"name":"keratinocyte derived chemokine production","type":"exact"}],"termid":"GO:0072566"}


id: GO:2001104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a heptasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"heptasaccharide transport","termid":"GO:2001104"}


id: PBO:0070563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 29","termid":"PBO:0070563"}


id: GO:0048812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a neuron projection are generated and organized. A neuron projection is any process extending from a neural cell, such as axons or dendrites.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection morphogenesis","termid":"GO:0120039"},{"relation_name":"part_of","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection morphogenesis","synonyms":[{"name":"neurite biosynthesis","type":"narrow"},{"name":"neurite formation","type":"narrow"},{"name":"neurite growth","type":"narrow"},{"name":"neurite morphogenesis","type":"related"}],"termid":"GO:0048812"}


id: GO:0042003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Promotion of male sex and sexual phenotypes in the hermaphroditic nematode soma. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hermaphrodite somatic sex determination","termid":"GO:0042001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"masculinization of hermaphrodite soma","termid":"GO:0042003"}


id: PBO:0049910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexosaminidase subunit beta","termid":"PBO:0049910"}


id: PBO:0047130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 170 member B","termid":"PBO:0047130"}


id: GO:0033124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of GTP catabolic process (obsolete GO:0033124)","synonyms":[{"name":"regulation of GTP breakdown","type":"exact"},{"name":"regulation of GTP catabolism","type":"exact"},{"name":"regulation of GTP degradation","type":"exact"}],"termid":"GO:0033124"}


id: GO:0006832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete small molecule transport (obsolete GO:0006832)","synonyms":[{"name":"small molecule transport","type":"exact"}],"termid":"GO:0006832"}


id: GO:0090580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolytic removal of phosphoglycolate from the 3'-terminus of a 3'-phosphoglycolate-terminated DNA strand.","definition_xrefs":["PMID:11238902","GOC:pde","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787","GO:0140097"],"is_obsolete":false,"name":"phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","termid":"GO:0090580"}


id: FYPO:0001361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of one or more amino acids into the cell is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import","termid":"FYPO:0001057"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal amino acid import during vegetative growth","synonyms":[{"name":"abnormal amino acid import across plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal amino acid import during mitotic cell cycle","type":"related"},{"name":"abnormal amino acid import into cell during vegetative growth","type":"exact"},{"name":"abnormal amino acid uptake during vegetative growth","type":"exact"}],"termid":"FYPO:0001361"}


id: PBO:0012294
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation impaired","termid":"PBO:0012294"}


id: PBO:0076358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 5","termid":"PBO:0076358"}


id: PBO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein, truncated","termid":"PBO:0000144"}


id: PBO:0036437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related GC kinase Nak1","termid":"PBO:0036437"}


id: PBO:0083822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); complex couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; is transferred to the kinetochore prior to mitosis","termid":"PBO:0083822"}


id: PBO:0030594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_aspartate_level","termid":"PBO:0030594"}


id: FYPO:0005762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which homocitrate synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished homocitrate synthase activity","synonyms":[{"name":"homocitrate synthase activity abolished","type":"exact"}],"termid":"FYPO:0005762"}


id: GO:0160004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ADP-ribosylation of the target protein.","definition_xrefs":["PMID:26673700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-D-ribose modification-dependent protein binding","termid":"GO:0160002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"poly-ADP-D-ribose modification-dependent protein binding","termid":"GO:0160004"}


id: GO:1903948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of atrial cardiac muscle cell action potential.","definition_xrefs":["GO_REF:0000058","GOC:nc","GOC:BHF","PMID:25281747","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of action potential","termid":"GO:0045759"},{"relation_name":"is_a","term_name":"regulation of atrial cardiac muscle cell action potential","termid":"GO:0098910"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle cell contraction","termid":"GO:0106135"},{"relation_name":"negatively_regulates","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of atrial cardiac muscle cell action potential","synonyms":[{"name":"down regulation of atrial cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of atrial cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of atrial cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of atrial cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:1903948"}


id: GO:0097309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Methylation of the ribose of the first nucleotide of a 5'-capped mRNA.","definition_xrefs":["PMID:20713356","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete cap1 mRNA methylation (obsolete GO:0097309)","synonyms":[{"name":"cap1 mRNA capping","type":"broad"}],"termid":"GO:0097309"}


id: GO:0042834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently, in a non-covalent manner, with peptidoglycan, any of a class of glycoconjugates found in bacterial cell walls.","definition_xrefs":["GOC:go_curators","PMID:14698226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"peptidoglycan binding","termid":"GO:0042834"}


id: PBO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.52","termid":"PBO:0000201"}


id: GO:0070223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sulfide oxidation process that proceeds via the reaction catalyzed by sulfur dioxygenase.","definition_xrefs":["MetaCyc:PWY-5285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfide oxidation","termid":"GO:0019418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfide oxidation, using sulfur dioxygenase","synonyms":[{"name":"sulphide oxidation, using sulfur dioxygenase","type":"exact"}],"termid":"GO:0070223"}


id: GO:0046274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lignins, a class of polymers of phenylpropanoid units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin metabolic process","termid":"GO:0009808"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lignin catabolic process","synonyms":[{"name":"lignin breakdown","type":"exact"},{"name":"lignin catabolism","type":"exact"},{"name":"lignin degradation","type":"exact"}],"termid":"GO:0046274"}


id: PBO:0081865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 804A","termid":"PBO:0081865"}


id: GO:0003035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of carbon dioxide are received and are converted to a molecular signal by chemoreceptors in a carotid body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of increased carbon dioxide by chemoreceptor signaling","termid":"GO:0003021"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by carotid body chemoreceptor signaling","termid":"GO:0003029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of increased carbon dioxide by carotid body chemoreceptor signaling","synonyms":[{"name":"detection of increased carbon dioxide by carotid body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003035"}


