# terms

id: PBO:0053879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1157","termid":"PBO:0053879"}


id: GO:0052674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-pimara-9(11),15-diene + diphosphate.","definition_xrefs":["RHEA:25544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"ent-pimara-9(11),15-diene synthase activity","secondary_identifiers":["EC:4.2.3.31","MetaCyc:RXN-9299"],"synonyms":[{"name":"PMD synthase activity","type":"broad"},{"name":"ent-copalyl-diphosphate diphosphate-lyase [ent-pimara-9(11),15-diene-forming] activity","type":"exact"}],"termid":"GO:0052674"}


id: PBO:0083549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized ORF YER067W","termid":"PBO:0083549"}


id: PBO:0035795
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_secretion_during_vegetative_growth","termid":"PBO:0035795"}


id: GO:0034532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-7-hydroxymethylchromene-2-carboxylate = 2-hydroxy-4-hydroxymethylbenzalpyruvate.","definition_xrefs":["UM-BBD_reactionID:r0765"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-7-hydroxymethylchromene-2-carboxylate isomerase activity (obsolete GO:0034532)","termid":"GO:0034532"}


id: MOD:01580
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01580"}


id: GO:0047297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-oxo acid + L-asparagine = an amino acid + 2-oxosuccinamate.","definition_xrefs":["EC:2.6.1.14","MetaCyc:2.6.1.14-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"asparagine-oxo-acid transaminase activity","secondary_identifiers":["RHEA:19813"],"synonyms":[{"name":"L-asparagine:2-oxo-acid aminotransferase activity","type":"related"},{"name":"asparagine--oxo-acid aminotransferase activity","type":"related"},{"name":"asparagine-keto acid aminotransferase activity","type":"related"},{"name":"asparagine-oxo-acid aminotransferase activity","type":"exact"}],"termid":"GO:0047297"}


id: PBO:0003359
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally activates per1","termid":"PBO:0003359"}


id: PBO:0082780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SWR1 complex; complex exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082780"}


id: FYPO:0008108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which mitochondrial is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal mitochondrial distribution","termid":"FYPO:0007912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitochondrial inheritance","termid":"FYPO:0008108"}


id: GO:0060491
data:
  {"annotated_genes":["SJAG_01794","SJAG_03453","SJAG_02379","SJAG_04509","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107458,86957,89577,84030,85991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell projection assembly.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"regulates","term_name":"cell projection assembly","termid":"GO:0030031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell projection formation","type":"related"}],"termid":"GO:0060491","terms_by_termid":{"GO:1902917":null}}


id: GO:0000702
data:
  {"annotated_genes":["SJAG_03724","SJAG_01119","SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034042"},{"annotations":[92255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034043"},{"annotations":[90972,92256,73123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"},{"annotations":[92259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008534"},{"annotations":[92260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000703"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of oxidized bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site.","definition_xrefs":["GOC:elh","PMID:11554296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"oxidized base lesion DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000702","terms_by_termid":{"GO:0000703":null,"GO:0008534":null,"GO:0034039":null,"GO:0034042":null,"GO:0034043":null}}


id: GO:0032745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-21 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-21 production","termid":"GO:0032665"},{"relation_name":"positively_regulates","term_name":"interleukin-21 production","termid":"GO:0032625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-21 production","secondary_identifiers":["GO:0045392"],"synonyms":[{"name":"activation of interleukin-21 production","type":"narrow"},{"name":"positive regulation of IL-21 production","type":"exact"},{"name":"positive regulation of interleukin-21 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-21 production","type":"narrow"},{"name":"up regulation of interleukin-21 production","type":"exact"},{"name":"up-regulation of interleukin-21 production","type":"exact"},{"name":"upregulation of interleukin-21 production","type":"exact"}],"termid":"GO:0032745"}


id: PATO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality pertaining to the degree to which an object contains an opening, aperture, orifice or vent.","definition_xrefs":["PATOC:CJM","PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"closure","termid":"PATO:0000136"}


id: GO:1990502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps required to transform a dense core granule generated at the trans-Golgi network into a fully formed and transmissible dense core granule. Dense core granule maturation proceeds through clathrin-mediated membrane remodeling events and is essential for efficient processing of cargo within dense core granules as well as for removing factors that might otherwise interfere with dense core granule trafficking and exocytosis.","definition_xrefs":["PMID:22654674","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule maturation","termid":"GO:0061792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dense core granule maturation","synonyms":[{"name":"dense core vesicle maturation","type":"exact"}],"termid":"GO:1990502"}


id: PBO:0029375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_site_of_double-strand_break","termid":"PBO:0029375"}


id: PBO:0028243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_glycosylated_protein_in_cell","termid":"PBO:0028243"}


id: GO:0005723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, compact region of heterochromatin located in the middle of the polytene chromosome chromocenter, which undergoes little or no replication during polytenization.","definition_xrefs":["PMID:8878678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericentric heterochromatin","termid":"GO:0005721"},{"relation_name":"part_of","term_name":"polytene chromosome chromocenter","termid":"GO:0005701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"alpha-heterochromatin","termid":"GO:0005723"}


id: PBO:0042749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein U pseudogene 2","termid":"PBO:0042749"}


id: GO:0010114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:mtg_far_red","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to red light","synonyms":[{"name":"response to red light stimulus","type":"exact"}],"termid":"GO:0010114"}


id: PBO:0064322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 4","termid":"PBO:0064322"}


id: PBO:0068614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 65, pseudogene","termid":"PBO:0068614"}


id: PBO:0055397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2827","termid":"PBO:0055397"}


id: PATO:0002275
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern quality inhering in a bearer by virtue of the bearer's color pattern in which light and dark colors (for example white and black) are codistributed to create a visual impression.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color pattern","termid":"PATO:0000019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high contrast color pattern","termid":"PATO:0002275"}


id: GO:0046346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannosomine, 2-amino-2-deoxymannose; the D-isomer is a constituent of neuraminic acids as well as mucolipids and mucoproteins.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosamine metabolic process","termid":"GO:0006050"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannosamine catabolic process","synonyms":[{"name":"mannosamine breakdown","type":"exact"},{"name":"mannosamine catabolism","type":"exact"},{"name":"mannosamine degradation","type":"exact"}],"termid":"GO:0046346"}


id: GO:0106042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of GABA-A receptor activity.","definition_xrefs":["PMID:24044036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of GABA-A receptor activity","termid":"GO:0106040"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of GABA-A receptor activity","termid":"GO:0106042"}


id: GO:0015811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-cystine (also known as dicysteine) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transport","termid":"GO:0000101"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-cystine transport","termid":"GO:0015811"}


id: PBO:0045733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELL associated factor 2","termid":"PBO:0045733"}


id: PBO:0069788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1074, pseudogene","termid":"PBO:0069788"}


id: PBO:0047344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphatase 2","termid":"PBO:0047344"}


id: FYPO:0001525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to L-thialysine. Cells stop growing (and may die) at a concentration of L-thialysine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to L-thialysine","synonyms":[{"name":"hypersensitive to L-thialysine","type":"exact"},{"name":"sensitive to L-thialysine during mitotic cell cycle","type":"related"},{"name":"sensitive to L-thialysine during vegetative growth","type":"exact"},{"name":"sensitive to thialysine","type":"broad"}],"termid":"FYPO:0001525"}


id: SO:0001808
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the mitochondrion.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"mitochondrial_targeting_signal","synonyms":[{"name":"MTS","type":"exact"},{"name":"mitochondrial signal sequence","type":"exact"},{"name":"mitochondrial targeting signal","type":"exact"}],"termid":"SO:0001808"}


id: PBO:0060006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 26","termid":"PBO:0060006"}


id: PBO:0053012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 2","termid":"PBO:0053012"}


id: PBO:0080092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 54","termid":"PBO:0080092"}


id: GO:0043884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + corrinoid protein = CO + methylcorrinoid protein + CoA.","definition_xrefs":["EC:2.3.1.169","PMID:1748656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"CO-methylating acetyl-CoA synthase activity","secondary_identifiers":["RHEA:45212","MetaCyc:ACETYLSYNCLTH-RXN"],"synonyms":[{"name":"ACS","type":"related"},{"name":"CO-methylating acetyl-coenzyme A synthase activity","type":"exact"},{"name":"acetyl-CoA synthase activity","type":"broad"},{"name":"acetyl-CoA:corrinoid protein O-acetyltransferase activity","type":"exact"}],"termid":"GO:0043884"}


id: MOD:00702
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms or groups containing isotopes that are not the most common.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope labeled residue","synonyms":[{"name":"IsoTagRes","type":"exact"},{"name":"SILAC","type":"exact"}],"termid":"MOD:00702"}


id: GO:0099630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during which neurotransmitter receptors in the postsynaptic specialization membrane are recycled via the endosome. This cycle includes release from anchoring (trapping), diffusion in the synaptic membrane to the postsynaptic endocytic region, endocytosis, transport to the endosome, recycling in the endosome, transport back the synaptic membrane and subsequent trapping in the postsynaptic specialization membrane.","definition_xrefs":["PMID:18832033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"neurotransmitter receptor cycle","termid":"GO:0099627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"postsynaptic neurotransmitter receptor cycle","termid":"GO:0099630"}


id: GO:0055037
data:
  {"annotated_genes":["SJAG_01448","SJAG_04343","SJAG_03915"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76282,87392,98759],"is_not":false,"summary":null,"term":"GO:0055037"}]},"cv_name":"cellular_component","definition":"An organelle consisting of a network of tubules that functions in targeting molecules, such as receptors transporters and lipids, to the plasma membrane.","definition_xrefs":["GOC:rph","GOC:kmv","GOC:dph","GOC:jid","PMID:10930469","PMID:16246101","PMID:21562044","PMID:15601896","PMID:21556374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01448":null,"SJAG_03915":null,"SJAG_04343":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005768","GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"recycling endosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ERC","type":"related"},{"name":"endosomal recycling compartment","type":"exact"},{"name":"endosome recycling compartment","type":"related"}],"termid":"GO:0055037","terms_by_termid":{"GO:0055037":null}}


id: GO:0031378
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A fatty acid synthase complex in which each polypeptide chain catalyzes a single activity, located in a plastid.","definition_xrefs":["PMID:12957385","ISBN:0716720094","GOC:mah","ISBN:0471331309"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid type II fatty acid synthase complex (obsolete GO:0031378)","synonyms":[{"name":"plastid type II FAS complex","type":"exact"},{"name":"plastid type II fatty acid synthase complex","type":"exact"}],"termid":"GO:0031378"}


id: PBO:0044442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 11","termid":"PBO:0044442"}


id: PBO:0053485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 460","termid":"PBO:0053485"}


id: PBO:0088503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L34","termid":"PBO:0088503"}


id: PBO:0062394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 15 pseudogene","termid":"PBO:0062394"}


id: PBO:0000656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MIZ","termid":"PBO:0000656"}


id: PBO:0048387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARS1 divergent transcript","termid":"PBO:0048387"}


id: GO:0036339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a lymphocyte to an endothelial cell of a high endothelial venule (HEV) via adhesion molecules. A HEV cell is an endothelial cell that is cuboidal, expresses leukocyte-specific receptors, and allows for passage of lymphocytes into bloodstream.","definition_xrefs":["GOC:nhn","PMID:7679710","PMID:19339990","CL:0002652","Wikipedia:High_endothelial_venules","CL:0000542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"lymphocyte adhesion to endothelial cell of high endothelial venule","synonyms":[{"name":"lymphocyte adhesion to HEV cell","type":"exact"},{"name":"lymphocyte adhesion to high endothelial venule","type":"exact"}],"termid":"GO:0036339"}


id: PBO:0081830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 764","termid":"PBO:0081830"}


id: GO:0071733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation and maintenance of DNA loops that juxtapose the promoter and enhancer regions of RNA polymerase II-transcribed genes and activate transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:15060134","GOC:mah","PMID:19923429"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional activation by promoter-enhancer looping (obsolete GO:0071733)","synonyms":[{"name":"long-range enhancer-promoter communication","type":"related"}],"termid":"GO:0071733"}


id: PR:P50537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mae1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic acid transport protein Mae1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.03","synonyms":[{"name":"SPAPB8E5.03","type":"related"},{"name":"Spom972h-mae1","type":"exact"},{"name":"malate permease (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:P50537"}


id: PBO:0079352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB antisense RNA 1","termid":"PBO:0079352"}


id: PBO:0090053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane LMBR1-like multi-pass membrane protein, human LMBRD2 ortholog, implicated in signalling","termid":"PBO:0090053"}


id: PBO:0071801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulation of nuclear pre-mRNA domain containing 1B","termid":"PBO:0071801"}


id: PBO:0045252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal light chain 4","termid":"PBO:0045252"}


id: PBO:0063850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein inhibitor of activated STAT 3","termid":"PBO:0063850"}


id: GO:0140233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when intracellular cAMP has been bound by the channel complex or one of its constituent parts, to regulate the postsynaptic membrane potential.","definition_xrefs":["GOC:pvn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly cAMP-activated cation channel activity","termid":"GO:0005222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"intracellular cAMP-activated cation channel activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"intracellular cAMP activated cation channel activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0140233"}


id: PBO:0057282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 503","termid":"PBO:0057282"}


id: GO:0030804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclic nucleotide biosynthetic process (obsolete GO:0030804)","synonyms":[{"name":"activation of cyclic nucleotide biosynthetic process","type":"narrow"},{"name":"positive regulation of cyclic nucleotide anabolism","type":"exact"},{"name":"positive regulation of cyclic nucleotide biosynthesis","type":"exact"},{"name":"positive regulation of cyclic nucleotide formation","type":"exact"},{"name":"positive regulation of cyclic nucleotide synthesis","type":"exact"},{"name":"stimulation of cyclic nucleotide biosynthetic process","type":"narrow"},{"name":"up regulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"up-regulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"upregulation of cyclic nucleotide biosynthetic process","type":"exact"}],"termid":"GO:0030804"}


id: PBO:0067164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 217, pseudogene","termid":"PBO:0067164"}


id: PBO:0002470
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.19","termid":"PBO:0002470"}


id: GO:1900395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of kojic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"regulation of kojic acid biosynthetic process","termid":"GO:1900394"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"kojic acid biosynthetic process","termid":"GO:2001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of kojic acid biosynthetic process","synonyms":[{"name":"down regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"down regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"down regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"down regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"down regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"down regulation of C6H6O4 anabolism","type":"related"},{"name":"down regulation of C6H6O4 biosynthesis","type":"related"},{"name":"down regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"down regulation of C6H6O4 formation","type":"related"},{"name":"down regulation of C6H6O4 synthesis","type":"related"},{"name":"down regulation of kojic acid anabolism","type":"exact"},{"name":"down regulation of kojic acid biosynthesis","type":"exact"},{"name":"down regulation of kojic acid biosynthetic process","type":"exact"},{"name":"down regulation of kojic acid formation","type":"exact"},{"name":"down regulation of kojic acid synthesis","type":"exact"},{"name":"down-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"down-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"down-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"down-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"down-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"down-regulation of C6H6O4 anabolism","type":"related"},{"name":"down-regulation of C6H6O4 biosynthesis","type":"related"},{"name":"down-regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"down-regulation of C6H6O4 formation","type":"related"},{"name":"down-regulation of C6H6O4 synthesis","type":"related"},{"name":"down-regulation of kojic acid anabolism","type":"exact"},{"name":"down-regulation of kojic acid biosynthesis","type":"exact"},{"name":"down-regulation of kojic acid biosynthetic process","type":"exact"},{"name":"down-regulation of kojic acid formation","type":"exact"},{"name":"down-regulation of kojic acid synthesis","type":"exact"},{"name":"downregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"downregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"downregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"downregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"downregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"downregulation of C6H6O4 anabolism","type":"related"},{"name":"downregulation of C6H6O4 biosynthesis","type":"related"},{"name":"downregulation of C6H6O4 biosynthetic process","type":"related"},{"name":"downregulation of C6H6O4 formation","type":"related"},{"name":"downregulation of C6H6O4 synthesis","type":"related"},{"name":"downregulation of kojic acid anabolism","type":"exact"},{"name":"downregulation of kojic acid biosynthesis","type":"exact"},{"name":"downregulation of kojic acid biosynthetic process","type":"exact"},{"name":"downregulation of kojic acid formation","type":"exact"},{"name":"downregulation of kojic acid synthesis","type":"exact"},{"name":"inhibition of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"inhibition of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"inhibition of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"inhibition of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"inhibition of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"inhibition of C6H6O4 anabolism","type":"related"},{"name":"inhibition of C6H6O4 biosynthesis","type":"related"},{"name":"inhibition of C6H6O4 biosynthetic process","type":"related"},{"name":"inhibition of C6H6O4 formation","type":"related"},{"name":"inhibition of C6H6O4 synthesis","type":"related"},{"name":"inhibition of kojic acid anabolism","type":"exact"},{"name":"inhibition of kojic acid biosynthesis","type":"exact"},{"name":"inhibition of kojic acid biosynthetic process","type":"narrow"},{"name":"inhibition of kojic acid formation","type":"exact"},{"name":"inhibition of kojic acid synthesis","type":"exact"},{"name":"negative regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"negative regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"negative regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"negative regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"negative regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"negative regulation of C6H6O4 anabolism","type":"related"},{"name":"negative regulation of C6H6O4 biosynthesis","type":"related"},{"name":"negative regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"negative regulation of C6H6O4 formation","type":"related"},{"name":"negative regulation of C6H6O4 synthesis","type":"related"},{"name":"negative regulation of kojic acid anabolism","type":"exact"},{"name":"negative regulation of kojic acid biosynthesis","type":"exact"},{"name":"negative regulation of kojic acid formation","type":"exact"},{"name":"negative regulation of kojic acid synthesis","type":"exact"}],"termid":"GO:1900395"}


id: GO:0019904
data:
  {"annotated_genes":["SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033149"}]},"cv_name":"molecular_function","definition":"Binding to a specific domain of a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"protein domain specific binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"protein domain-specific binding","type":"exact"}],"termid":"GO:0019904","terms_by_termid":{"GO:0033149":null}}


id: PATO:0000899
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000899 soma dependent fertility value (obsolete PATO:0000899)","termid":"PATO:0000899"}


id: GO:1901816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-zeacarotene.","definition_xrefs":["UniPathway:UPA00805","PMID:3710717","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-zeacarotene metabolic process","synonyms":[{"name":"beta-zeacarotene metabolism","type":"exact"}],"termid":"GO:1901816"}


id: PBO:0079554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 7","termid":"PBO:0079554"}


id: PBO:0080497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor","termid":"PBO:0080497"}


id: PBO:0047089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member A","termid":"PBO:0047089"}


id: GO:0005744
data:
  {"annotated_genes":["SJAG_04432","SJAG_00373","SJAG_01879","SJAG_01442","SJAG_03560","SJAG_04014","SJAG_01597","SJAG_04218","SJAG_01120","SJAG_02077","SJAG_01615"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92992,98792,101266,103605,111318],"is_not":false,"summary":null,"term":"GO:0005744"},{"annotations":[99386,95341,105971,85659,107895,96417],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001405"}]},"cv_name":"cellular_component","definition":"The protein transport machinery of the mitochondrial inner membrane that typically transports proteins that possess a matrix-targeting N-terminal presequence. The TIM23 complex contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor.","definition_xrefs":["PMID:8851659","PMID:27554484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00373":null,"SJAG_01120":null,"SJAG_01442":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_03560":null,"SJAG_04014":null,"SJAG_04218":null,"SJAG_04432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TIM23 mitochondrial import inner membrane translocase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Tim23 complex","type":"exact"},{"name":"mitochondrial inner membrane pre-sequence translocase complex","type":"exact"},{"name":"mitochondrial inner membrane presequence translocase complex","type":"exact"},{"name":"mitochondrial inner membrane translocase complex","type":"broad"}],"termid":"GO:0005744","terms_by_termid":{"GO:0001405":null,"GO:0005744":null}}


id: GO:0030416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylamine (CH3NH2).","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methylamine metabolic process","synonyms":[{"name":"methylamine metabolism","type":"exact"},{"name":"methylammonium metabolic process","type":"exact"},{"name":"methylammonium metabolism","type":"exact"}],"termid":"GO:0030416"}


id: PBO:0002369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sec20 (predicted)","termid":"PBO:0002369"}


id: PBO:0045725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 6 pseudogene 2","termid":"PBO:0045725"}


id: FYPO:0003142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methyl methanesulfonate is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased RNA accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"decreased RNA level during cellular response to MMS","type":"exact"},{"name":"decreased RNA level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to methyl methanesulphonate","type":"exact"},{"name":"decreased mRNA level during cellular response to methyl methanesulfonate","type":"narrow"},{"name":"decreased transcript level during cellular response to methyl methanesulfonate","type":"exact"},{"name":"reduced RNA level during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0003142"}


id: PBO:0055489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2923","termid":"PBO:0055489"}


id: GO:0034637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular carbohydrate biosynthetic process (obsolete GO:0034637)","termid":"GO:0034637"}


id: PBO:0031676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_localization","termid":"PBO:0031676"}


id: PBO:0017964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase Mtd1 (predicted)","termid":"PBO:0017964"}


id: PBO:0063865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIF1 5'-to-3' DNA helicase","termid":"PBO:0063865"}


id: GO:0018461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fluoren-9-ol + 2 NADP+ = fluoren-9-one + 2 NADPH + 2 H+.","definition_xrefs":["EC:1.1.1.256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"fluoren-9-ol dehydrogenase activity","secondary_identifiers":["MetaCyc:9-FLUORENOL-DEHYDROGENASE-RXN","UM-BBD_reactionID:r0408"],"synonyms":[{"name":"9-fluorenol dehydrogenase activity","type":"exact"},{"name":"fluoren-9-ol:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0018461"}


id: GO:0071332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fructose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fructose","termid":"GO:0009750"},{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fructose stimulus","termid":"GO:0071332"}


id: SO:0000730
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gap in the sequence of known length. The unknown bases are filled in with N's.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap","synonyms":[{"name":"INSDC_feature:assembly_gap","type":"narrow"},{"name":"INSDC_feature:gap","type":"exact"}],"termid":"SO:0000730"}


id: PBO:0068798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 35, pseudogene","termid":"PBO:0068798"}


id: PBO:0059734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 8","termid":"PBO:0059734"}


id: FYPO:0003981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutathione transferase activity","termid":"FYPO:0003980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"increased glutathione transferase activity","termid":"FYPO:0003981"}


id: PBO:0087447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit IV of cytochrome c oxidase; the terminal member of the mitochondrial inner membrane electron transport chain; precursor N-terminal 25 residues are cleaved during mitochondrial import; phosphorylated; spermidine enhances translation","termid":"PBO:0087447"}


id: PBO:0029209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cobalt","termid":"PBO:0029209"}


id: GO:0018393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acetyl group to a non-terminal lysine residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"internal protein amino acid acetylation","termid":"GO:0006475"},{"relation_name":"is_a","term_name":"peptidyl-lysine acetylation","termid":"GO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"internal peptidyl-lysine acetylation","termid":"GO:0018393"}


id: PBO:0002650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine kinase Mak1","termid":"PBO:0002650"}


id: PR:P0CT78
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1102 gene.","definition_xrefs":["UniProtKB:P0CT78","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L11-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.10","synonyms":[{"name":"Spom972h-rpl1102","type":"exact"}],"termid":"PR:P0CT78"}


id: PBO:0041270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 2","termid":"PBO:0041270"}


id: GO:0098919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynaptic density.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of postsynaptic specialization","termid":"GO:0098879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of postsynaptic density","termid":"GO:0098919"}


id: FYPO:0006102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable cytoplasmic microtubules during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubules absent from cell","termid":"FYPO:0004702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"interphase microtubules absent from cell","synonyms":[{"name":"absent interphase microtubules","type":"exact"},{"name":"cytoplasmic microtubules absent from cell during mitotic interphase","type":"exact"},{"name":"interphase cytoplasmic microtubules absent from cell","type":"exact"},{"name":"interphase microtubules absent from cell during mitotic cell cycle","type":"related"},{"name":"interphase microtubules absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0006102"}


id: PBO:0028110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_bis(5'-adenosyl)-hexaphosphatase_activity","termid":"PBO:0028110"}


id: PBO:0031163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glycine_import","termid":"PBO:0031163"}


id: FYPO:0006033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) during mitotic DNA replication.","definition_xrefs":["PMID:28481910","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to chromatin during mitotic DNA replication","synonyms":[{"name":"normal protein localisation to chromatin during mitotic DNA replication","type":"exact"},{"name":"normal protein localization to chromatin during DNA replication during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin during DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0006033"}


id: PBO:0086837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein predicted to have carbon-sulfur lyase activity; transcriptionally regulated by Upc2p via an upstream sterol response element; green fluorescent protein (GFP)-fusion protein localizes to the nucleus and the cytoplasm; not an essential gene; YML082W has a paralog, STR2, that arose from the whole genome duplication","termid":"PBO:0086837"}


id: SOFP:linked_to
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linked_to","termid":"SOFP:linked_to"}


id: GO:0097547
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic vesicle composed of both tubulovesicular and clear core vesicles that transport synaptic vesicle-associated proteins. Proteins carried by synaptic vesicle protein transport vesicles (STVs) include synaptophysin, synapsin Ia, synaptotagmin and synaptobrevin/vesicle-associated membrane protein 2 (VAMP2). STVs are packaged via the trans-Golgi network before being transported through the axon.","definition_xrefs":["GOC:dr","PMID:21569270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"synaptic vesicle protein transport vesicle","synonyms":[{"name":"STV","type":"exact"}],"termid":"GO:0097547"}


id: GO:0051204
data:
  {"annotated_genes":["SJAG_05300","SJAG_03633","SJAG_01917","SJAG_05302","SJAG_01405"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110787],"is_not":false,"summary":null,"term":"GO:0051204"},{"annotations":[84929,95108,97018,109449,110786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"The process that results in the incorporation of a protein into a mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"protein localization to mitochondrion","termid":"GO:0070585"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01405":null,"SJAG_01917":null,"SJAG_03633":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"protein insertion into mitochondrial membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"integral mitochondrial membrane protein localization","type":"exact"},{"name":"integral mitochondrial membrane protein positioning","type":"exact"},{"name":"localization of protein in mitochondrial membrane","type":"exact"},{"name":"positioning of protein in mitochondrial membrane","type":"exact"},{"name":"protein insertion into mitochondrion membrane","type":"exact"},{"name":"protein-mitochondrial membrane insertion","type":"exact"},{"name":"protein-mitochondrion membrane insertion","type":"exact"}],"termid":"GO:0051204","terms_by_termid":{"GO:0032979":null,"GO:0051204":null}}


id: PBO:0071089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 91","termid":"PBO:0071089"}


id: PBO:0041586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 1","termid":"PBO:0041586"}


id: PBO:0048752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 3","termid":"PBO:0048752"}


id: PR:Q10325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mst2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase mst2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.13c","synonyms":[{"name":"Spom972h-mst2","type":"exact"}],"termid":"PR:Q10325"}


id: GO:0004178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal amino acid, Xaa-Xbb-, in which Xaa is preferably Leu, but may be other amino acids including Pro although not Arg or Lys, and Xbb may be Pro.","definition_xrefs":["EC:3.4.11.1"],"gene_count":0,"genotype_count":0,"name":"obsolete leucyl aminopeptidase activity (obsolete GO:0004178)","secondary_identifiers":["MetaCyc:3.4.11.1-RXN"],"synonyms":[{"name":"FTBL proteins","type":"related"},{"name":"L-leucine aminopeptidase activity","type":"related"},{"name":"aminopeptidase II","type":"related"},{"name":"cathepsin III","type":"related"},{"name":"cytosol aminopeptidase activity","type":"narrow"},{"name":"leucinamide aminopeptidase activity","type":"related"},{"name":"leucinaminopeptidase activity","type":"related"},{"name":"leucine aminopeptidase activity","type":"related"},{"name":"leucyl aminopeptidase activity","type":"exact"},{"name":"leucyl peptidase activity","type":"related"},{"name":"peptidase S activity","type":"narrow"},{"name":"proteinates FTBL","type":"related"}],"termid":"GO:0004178"}


id: GO:0005436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + phosphate(out) = Na+(in) + phosphate(in).","definition_xrefs":["TC:2.A.1.14.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sodium:phosphate symporter activity","secondary_identifiers":["Reactome:R-HSA-5651697","Reactome:R-HSA-5651971","Reactome:R-HSA-5625123","Reactome:R-HSA-2872498","Reactome:R-HSA-428609","Reactome:R-HSA-427656","Reactome:R-HSA-5687585","GO:0015321","Reactome:R-HSA-427645","Reactome:R-HSA-427605","Reactome:R-HSA-5651685"],"synonyms":[{"name":"sodium-dependent phosphate transmembrane transporter activity","type":"related"},{"name":"sodium/phosphate symporter activity","type":"exact"}],"termid":"GO:0005436"}


id: GO:1901127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of candicidin.","definition_xrefs":["UniPathway:UPA00101","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"candicidin metabolic process","termid":"GO:1901125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"candicidin biosynthetic process","synonyms":[{"name":"candicidin anabolism","type":"exact"},{"name":"candicidin biosynthesis","type":"exact"},{"name":"candicidin formation","type":"exact"},{"name":"candicidin synthesis","type":"exact"}],"termid":"GO:1901127"}


id: PBO:0001780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide N-methyltransferase Nnt1 (predicted)","termid":"PBO:0001780"}


id: PBO:0028363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septated_cell","termid":"PBO:0028363"}


id: PBO:0029521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_normal_volume_septated_spheroid_vegetative_cell","termid":"PBO:0029521"}


id: PBO:0003133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate lyase","termid":"PBO:0003133"}


id: GO:0005525
data:
  {"annotated_genes":["SJAG_01215","SJAG_02171","SJAG_04004","SJAG_01534","SJAG_04375","SJAG_00457","SJAG_01379","SJAG_02331","SJAG_01929","SJAG_00031","SJAG_01391","SJAG_00663","SJAG_00424","SJAG_04233","SJAG_02366","SJAG_03371","SJAG_04366","SJAG_02302","SJAG_02292","SJAG_01449","SJAG_02656","SJAG_03275","SJAG_04666","SJAG_03342","SJAG_03846","SJAG_00044","SJAG_02604","SJAG_02605","SJAG_02824","SJAG_02661","SJAG_02384","SJAG_00118","SJAG_01789","SJAG_01695","SJAG_02233","SJAG_02640","SJAG_00983","SJAG_04387","SJAG_04470","SJAG_00906","SJAG_02509","SJAG_03453","SJAG_04509","SJAG_05030","SJAG_01769","SJAG_00430","SJAG_03732","SJAG_04003","SJAG_04862","SJAG_00801","SJAG_04351","SJAG_05332","SJAG_02353","SJAG_03684","SJAG_00226","SJAG_03959","SJAG_00968","SJAG_00231","SJAG_00466","SJAG_03072","SJAG_01438","SJAG_02601","SJAG_02595","SJAG_01456","SJAG_03374","SJAG_01558","SJAG_03137","SJAG_02520","SJAG_01909","SJAG_01851","SJAG_02180","SJAG_02856","SJAG_00659","SJAG_04343","SJAG_02848","SJAG_01774","SJAG_04157","SJAG_01339","SJAG_01277","SJAG_02444","SJAG_00840","SJAG_00360","SJAG_04940","SJAG_03461","SJAG_03688","SJAG_03188","SJAG_04874","SJAG_00414","SJAG_00344","SJAG_02684","SJAG_03915","SJAG_01696","SJAG_01358"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60589,84040,85015,85361,85561,85860,86421,86966,87187,87401,88026,88086,88121,88525,88801,88894,88963,89354,89496,89553,89700,89701,89702,89952,90337,90387,90435,90611,91335,91871,92384,92618,93180,93861,94010,94406,94407,94492,95739,95814,96062,96218,96761,96954,97065,97342,97390,97552,97871,98729,98752,98872,98987,99599,99776,100027,100117,100692,100743,100988,101142,101501,102097,102642,103232,103271,103292,103525,103533,104566,104801,104829,104951,105363,105428,105853,106365,106632,106639,106640,106937,107536,107618,108231,108500,108501,108502,108967,109632,112026,112064,112180,112714,113409,113571,113576,113577,114434,114545,114546,114547,115015,115016],"is_not":false,"summary":null,"term":"GO:0005525"}]},"cv_name":"molecular_function","definition":"Binding to GTP, guanosine triphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate binding","termid":"GO:0035639"}],"gene_count":93,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00044":null,"SJAG_00118":null,"SJAG_00226":null,"SJAG_00231":null,"SJAG_00344":null,"SJAG_00360":null,"SJAG_00414":null,"SJAG_00424":null,"SJAG_00430":null,"SJAG_00457":null,"SJAG_00466":null,"SJAG_00659":null,"SJAG_00663":null,"SJAG_00801":null,"SJAG_00840":null,"SJAG_00906":null,"SJAG_00968":null,"SJAG_00983":null,"SJAG_01215":null,"SJAG_01277":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01379":null,"SJAG_01391":null,"SJAG_01438":null,"SJAG_01449":null,"SJAG_01456":null,"SJAG_01534":null,"SJAG_01558":null,"SJAG_01695":null,"SJAG_01696":null,"SJAG_01769":null,"SJAG_01774":null,"SJAG_01789":null,"SJAG_01851":null,"SJAG_01909":null,"SJAG_01929":null,"SJAG_02171":null,"SJAG_02180":null,"SJAG_02233":null,"SJAG_02292":null,"SJAG_02302":null,"SJAG_02331":null,"SJAG_02353":null,"SJAG_02366":null,"SJAG_02384":null,"SJAG_02444":null,"SJAG_02509":null,"SJAG_02520":null,"SJAG_02595":null,"SJAG_02601":null,"SJAG_02604":null,"SJAG_02605":null,"SJAG_02640":null,"SJAG_02656":null,"SJAG_02661":null,"SJAG_02684":null,"SJAG_02824":null,"SJAG_02848":null,"SJAG_02856":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03188":null,"SJAG_03275":null,"SJAG_03342":null,"SJAG_03371":null,"SJAG_03374":null,"SJAG_03453":null,"SJAG_03461":null,"SJAG_03684":null,"SJAG_03688":null,"SJAG_03732":null,"SJAG_03846":null,"SJAG_03915":null,"SJAG_03959":null,"SJAG_04003":null,"SJAG_04004":null,"SJAG_04157":null,"SJAG_04233":null,"SJAG_04343":null,"SJAG_04351":null,"SJAG_04366":null,"SJAG_04375":null,"SJAG_04387":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04862":null,"SJAG_04874":null,"SJAG_04940":null,"SJAG_05030":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GTP binding","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-167429"],"termid":"GO:0005525","terms_by_termid":{"GO:0005525":null}}


id: PBO:0064683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 19","termid":"PBO:0064683"}


id: PATO:0000499
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased duration","secondary_identifiers":["PATO:0000716"],"synonyms":[{"name":"decreased period","type":"exact"},{"name":"decreased time","type":"exact"},{"name":"fast time","type":"related"},{"name":"low period","type":"exact"},{"name":"shortened period","type":"exact"}],"termid":"PATO:0000499"}


id: PBO:0003246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAPII degradation factor Def1 (predicted)","termid":"PBO:0003246"}


id: GO:0033813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + deacetylcephalosporin C = cephalosporin C + CoA.","definition_xrefs":["EC:2.3.1.175","RHEA:23860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"deacetylcephalosporin-C acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.175-RXN","KEGG_REACTION:R03064"],"synonyms":[{"name":"CPC acetylhydrolase activity","type":"related"},{"name":"DAC acetyltransferase activity","type":"related"},{"name":"DAC-AT","type":"related"},{"name":"acetyl coenzyme A:DAC acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:DAC O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:DAC acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:deacetylcephalosporin-C O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:deacetylcephalosporin-C acetyltransferase activity","type":"related"},{"name":"cefG","type":"related"},{"name":"deacetylcephalosporin C acetyltransferase activity","type":"related"}],"termid":"GO:0033813"}


id: GO:0061926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the formation of radial glial cell scaffolds.","definition_xrefs":["PMID:22076441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell morphogenesis","termid":"GO:0010770"},{"relation_name":"is_a","term_name":"regulation of formation of radial glial scaffolds","termid":"GO:0061924"},{"relation_name":"positively_regulates","term_name":"formation of radial glial scaffolds","termid":"GO:0021943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of radial glial scaffolds","synonyms":[{"name":"positive regulation of Bergmann fiber biosynthesis","type":"related"},{"name":"positive regulation of Bergmann fiber formation","type":"related"},{"name":"positive regulation of radial glial scaffold formation","type":"exact"}],"termid":"GO:0061926"}


id: GO:0021939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates the transfer of information from the extracellular matrix to granule cell precursors resulting in a decrease in rate of granule cell precursor cell proliferation.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix-cell signaling","termid":"GO:0035426"},{"relation_name":"part_of","term_name":"negative regulation of cerebellar granule cell precursor proliferation","termid":"GO:0021941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation","synonyms":[{"name":"extracellular matrix-granule cell signalling involved in regulation of granule cell precursor proliferation","type":"exact"}],"termid":"GO:0021939"}


id: PBO:0004044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rad60","termid":"PBO:0004044"}


id: GO:0070856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a light chain of a myosin VI complex.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin light chain binding","termid":"GO:0032027"},{"relation_name":"is_a","term_name":"myosin VI binding","termid":"GO:0070853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"myosin VI light chain binding","termid":"GO:0070856"}


id: GO:0002149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hypochlorous acid.","definition_xrefs":["PMID:176150","GOC:add","PMID:10085024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypochlorous acid metabolic process","termid":"GO:0002148"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"reactive oxygen species biosynthetic process","termid":"GO:1903409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"hypochlorous acid biosynthetic process","synonyms":[{"name":"HClO biosynthetic process","type":"exact"},{"name":"HOCl biosynthetic process","type":"exact"},{"name":"hypochlorite biosynthetic process","type":"related"},{"name":"hypochlorous acid biosynthesis","type":"exact"}],"termid":"GO:0002149"}


id: PBO:0058543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6089","termid":"PBO:0058543"}


id: PBO:0087087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L5; nascent Rpl5p is bound by specific chaperone Syo1p during translation; homologous to mammalian ribosomal protein L5 and bacterial L18; binds 5S rRNA and is required for 60S subunit assembly","termid":"PBO:0087087"}


id: PBO:0004037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein (predicted)","termid":"PBO:0004037"}


id: GO:0140037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular adaptor that recognizes and binds a target protein containing a SUMO modification and that brings the target protein into contact with another protein to allow those proteins to function in a coordinated way.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein reader activity","termid":"GO:0140035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0005488","GO:0030674","GO:0003674","GO:0060090","GO:0005515"],"is_obsolete":false,"name":"SUMO-modified protein reader activity","synonyms":[{"name":"SUMO-dependent protein binding","type":"exact"}],"termid":"GO:0140037"}


id: GO:1902568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eosinophil activation.","definition_xrefs":["PMID:16254138","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of eosinophil activation","termid":"GO:1902566"},{"relation_name":"positively_regulates","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eosinophil activation","synonyms":[{"name":"activation of eosinophil activation","type":"narrow"},{"name":"up regulation of eosinophil activation","type":"exact"},{"name":"up-regulation of eosinophil activation","type":"exact"},{"name":"upregulation of eosinophil activation","type":"exact"}],"termid":"GO:1902568"}


id: PBO:0044894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 7","termid":"PBO:0044894"}


id: FYECO:0000099
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Recovery from nitrogen starvation: cells are first grown in minimal medium containing no nitrogen for 72h-7days. This medium is then replaced with nitrogen containing rich medium and cells are allowed to grow for 4-7 days.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen starvation and recovery","termid":"FYECO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"72h-7days nitrogen starvation followed by 4-7 days recovery in rich medium","termid":"FYECO:0000099"}


id: SO:0000686
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal translocation whereby the chromosomes carrying non-homologous centromeres may be recovered independently. These chromosomes are described as translocation elements. This occurs for some translocations, particularly but not exclusively, reciprocal translocations.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_translocation","termid":"SO:1000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation_element","synonyms":[{"name":"translocation element","type":"exact"}],"termid":"SO:0000686"}


id: PBO:0075812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 pseudogene 1","termid":"PBO:0075812"}


id: PBO:0046959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 81 member A","termid":"PBO:0046959"}


id: PBO:0061371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 31","termid":"PBO:0061371"}


id: PBO:0033744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_linear_minichromosome_loss_during_vegetative_growth","termid":"PBO:0033744"}


id: GO:0101024
data:
  {"annotated_genes":["SJAG_01745","SJAG_03073","SJAG_00900","SJAG_01242","SJAG_03891","SJAG_05207","SJAG_00416","SJAG_01050","SJAG_03783","SJAG_03449","SJAG_00680","SJAG_04464","SJAG_03892","SJAG_04489"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107105,115225,115437,115464],"is_not":false,"summary":null,"term":"GO:0101024"},{"annotations":[89939,97535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140515"},{"annotations":[99245,84092,94070,92074,115368,99835,115366,115367,87447,102651,115369,96994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007084"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle process which results in the assembly, arrangement, or disassembly of the nuclear inner or outer membrane during mitosis.","definition_xrefs":["PMID:15147872","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00680":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_03073":null,"SJAG_03449":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_04464":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic nuclear membrane organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:28954740":null,"PMID:32243490":null},"synonyms":[{"name":"nuclear membrane organization involved in mitotic nuclear division","type":"exact"}],"termid":"GO:0101024","terms_by_termid":{"GO:0007084":null,"GO:0101024":null,"GO:0140515":null}}


id: FYPO:0005654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron assimilation RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Iron assimilation RNAs are transcribed from genes whose products are involved in any process in which iron is solubilized and transported into a cell.","definition_xrefs":["PomBase:mah","PMID:25806539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of iron assimilation gene mRNA during vegetative growth","synonyms":[{"name":"decreased iron assimilation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of iron assimilation gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of iron assimilation gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of iron assimilation gene transcripts during vegetative growth","type":"exact"},{"name":"reduced level of iron assimilation gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005654"}


id: PR:O74358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apc13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.01c","synonyms":[{"name":"20S cyclosome/APC complex protein apc13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-apc13","type":"exact"}],"termid":"PR:O74358"}


id: PATO:0000550
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000550 red light sensitivity value (obsolete PATO:0000550)","termid":"PATO:0000550"}


id: FYPO:0004746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly involved in chromatin silencing at the centromere outer repeat region does not occur.","definition_xrefs":["GO:0031507","PMID:24240238","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly at centromere outer repeat during vegetative growth","termid":"FYPO:0003098"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat","synonyms":[{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere otr","type":"exact"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at pericentric region","type":"related"},{"name":"abolished heterochromatin assembly involved in chromatin silencing at pericentromeric region","type":"related"},{"name":"heterochromatin assembly involved in chromatin silencing at centromere outer repeat abolished","type":"exact"}],"termid":"FYPO:0004746"}


id: GO:0046528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process following disc eversion whereby imaginal discs fuse with adjacent disc derivatives to form a continuous adult epidermis.","definition_xrefs":["PMID:11494317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc fusion","termid":"GO:0046528"}


id: GO:0160020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferroptosis.","definition_xrefs":["PMID:32015325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of ferroptosis","termid":"GO:0110075"},{"relation_name":"positively_regulates","term_name":"ferroptosis","termid":"GO:0097707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ferroptosis","termid":"GO:0160020"}


id: PBO:0081418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 274","termid":"PBO:0081418"}


id: GO:0061092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["GOC:tb","PMID:19966303","GOC:jh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of phospholipid translocation","termid":"GO:0061091"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid transport","termid":"GO:2001140"},{"relation_name":"positively_regulates","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of phospholipid translocation","termid":"GO:0061092"}


id: PBO:0029509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_spore_population_(obsolete_FYPO:0002206)","termid":"PBO:0029509"}


id: GO:0008343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Feeding behavior in a fully developed and mature organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"},{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult feeding behavior","synonyms":[{"name":"adult feeding behaviour","type":"exact"}],"termid":"GO:0008343"}


id: PBO:0088715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated WD repeat protein Utp4","termid":"PBO:0088715"}


id: GO:0060965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases the rate, frequency, or extent of gene silencing by a microRNA (miRNA).","definition_xrefs":["GOC:aruk","GOC:bc","GOC:dph","GOC:tb","PMID:23985560","GOC:rl","PMID:28379604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of miRNA-mediated gene silencing","termid":"GO:0060964"},{"relation_name":"is_a","term_name":"negative regulation of post-transcriptional gene silencing by regulatory ncRNA","termid":"GO:1900369"},{"relation_name":"negatively_regulates","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of miRNA-mediated gene silencing","synonyms":[{"name":"negative regulation of gene silencing by miRNA","type":"exact"},{"name":"negative regulation of gene silencing by microRNA","type":"exact"}],"termid":"GO:0060965"}


id: PR:O60168
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lcl3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease C19F8.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.04c","synonyms":[{"name":"Spom972h-lcl3","type":"exact"}],"termid":"PR:O60168"}


id: PBO:0075642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty RTK signaling antagonist 1","termid":"PBO:0075642"}


id: PBO:0002508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic cysteine-tRNA ligase Crs1 (predicted)","termid":"PBO:0002508"}


id: PBO:0081065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CW-type and PWWP domain containing 2","termid":"PBO:0081065"}


id: PBO:0053480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 454","termid":"PBO:0053480"}


id: PBO:0080322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 86 pseudogene","termid":"PBO:0080322"}


id: PATO:0001104
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001104 strain value (obsolete PATO:0001104)","termid":"PATO:0001104"}


id: PBO:0089231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENA/THI family protein, domain found in context with a broad range of enzymes","termid":"PBO:0089231"}


id: GO:0047809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + A = AH(2) + pyruvate.","definition_xrefs":["RHEA:15089","EC:1.1.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-2-hydroxy-acid dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00297","MetaCyc:D-2-HYDROXY-ACID-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(R)-2-hydroxy-acid:(acceptor) 2-oxidoreductase activity","type":"related"},{"name":"2-hydroxy acid dehydrogenase activity","type":"related"}],"termid":"GO:0047809"}


id: SO:1000157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An interchromosomal transition where the segment between the first two breaks listed is removed and inserted at the third break; the insertion is in cytologically the same orientation as its flanking segments.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interchromosomal_transposition","termid":"SO:1000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uninverted_interchromosomal_transposition","synonyms":[{"name":"(Drosophila)eTp","type":"related"},{"name":"uninverted interchromosomal transposition","type":"exact"}],"termid":"SO:1000157"}


id: PBO:0012009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosomal complex subunit (predicted)","termid":"PBO:0012009"}


id: PBO:0016581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase gamma","termid":"PBO:0016581"}


id: PBO:0079564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated protein 2","termid":"PBO:0079564"}


id: GO:0072001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the renal system over time, from its formation to the mature structure. The renal system maintains fluid balance and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products. In humans, the renal system comprises a pair of kidneys, a pair of ureters, urinary bladder, urethra, sphincter muscle and associated blood vessels.","definition_xrefs":["PMID:6996269","GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system development","synonyms":[{"name":"urinary system development","type":"broad"},{"name":"urinary tract development","type":"broad"}],"termid":"GO:0072001"}


id: GO:0075241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of zoospore formation, a process in which a diploid cell undergoes meiosis, and the meiotic products acquire specialized features of asexual motile mononucleate flagellated spores called zoospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of zoospore formation","termid":"GO:0075240"},{"relation_name":"is_a","term_name":"positive regulation of sporangiospore formation","termid":"GO:0075287"},{"relation_name":"positively_regulates","term_name":"zoospore formation","termid":"GO:0075239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of zoospore formation","termid":"GO:0075241"}


id: SO:1000044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal mutation. Rearrangements that alter the pairing of telomeres are classified as translocations.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocation","termid":"SO:0000199"},{"relation_name":"is_a","term_name":"interchromosomal_mutation","termid":"SO:1000031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_translocation","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosomal_translocation"],"synonyms":[{"name":"(Drosophila)T","type":"related"},{"name":"(fungi)T","type":"related"},{"name":"chromosomal translocation","type":"exact"}],"termid":"SO:1000044"}


id: MOD:01114
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triphenylmethyl","synonyms":[{"name":"Trityl","type":"exact"},{"name":"Trt","type":"exact"}],"termid":"MOD:01114"}


id: GO:0033820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-glucosyl residue from UDP-glucose to a hydroxymethylcytosine residue in DNA.","definition_xrefs":["EC:2.4.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740","GO:0140097"],"is_obsolete":false,"name":"DNA alpha-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.26-RXN"],"synonyms":[{"name":"T2-HMC-alpha-glucosyl transferase activity","type":"related"},{"name":"T4-HMC-alpha-glucosyl transferase activity","type":"related"},{"name":"T6-HMC-alpha-glucosyl transferase activity","type":"related"},{"name":"UDP-glucose:DNA alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-DNA alpha-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-deoxyribonucleate alpha-glucosyltransferase activity","type":"related"}],"termid":"GO:0033820"}


id: PBO:0072298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 16","termid":"PBO:0072298"}


id: GO:0062205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-copalyl diphosphate = diphosphate + miltiradiene.","definition_xrefs":["PMID:24990389","RHEA:33983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"miltiradiene synthase activity","secondary_identifiers":["MetaCyc:RXN-13338","GO:0102353","EC:4.2.3.131"],"synonyms":[{"name":"multiradiene synthase activity","type":"related"}],"termid":"GO:0062205"}


id: GO:0046412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenylmercury acetate, an organomercurial compound composed of a mercury atom attached to a benzene ring and an acetate group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organometal metabolic process","termid":"GO:0018942"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenylmercury acetate metabolic process","synonyms":[{"name":"phenylmercury acetate metabolism","type":"exact"}],"termid":"GO:0046412"}


id: PBO:0041133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 16","termid":"PBO:0041133"}


id: GO:0006268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication.","definition_xrefs":["ISBN:0815316194","ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA duplex unwinding","termid":"GO:0032508"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"DNA unwinding involved in DNA replication","synonyms":[{"name":"DNA unwinding during replication","type":"related"},{"name":"DNA unwinding factor","type":"related"}],"termid":"GO:0006268"}


id: GO:0048180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonsteroidal regulator, composed of two covalently linked inhibin beta subunits, inhibin beta-A and inhibin beta-B (sometimes known as activin beta or activin/inhibin beta). There are three forms of activin complex, activin A, which is composed of 2 inhibin beta-A subunits, activin B, which is composed of 2 inhibin beta-B subunits, and activin AB, which is composed of an inhibin beta-A and an inhibin beta-B subunit.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"activin complex","termid":"GO:0048180"}


id: PBO:0050152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 8","termid":"PBO:0050152"}


id: PBO:0090624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transthyretin/hydroxyisourate hydrolase","termid":"PBO:0090624"}


id: GO:0060123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of growth hormone from a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"growth hormone secretion","termid":"GO:0030252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of growth hormone secretion","termid":"GO:0060123"}


id: PBO:0065546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin D2 synthase","termid":"PBO:0065546"}


id: PBO:0051993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JAKMIP3 antisense RNA 1","termid":"PBO:0051993"}


id: PR:Q9P7C7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX46 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04347","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-processing ATP-dependent RNA helicase prp11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC10H11.01","secondary_identifiers":["UniProtKB:Q9P7C7"],"synonyms":[{"name":"Spom972h-DDX46","type":"exact"}],"termid":"PR:Q9P7C7"}


id: PR:O94561
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bcp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin C1773.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.02c","synonyms":[{"name":"Spom972h-bcp1","type":"exact"},{"name":"nTPx (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nuclear thiol peroxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"thioredoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94561"}


id: FYPO:0001894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain more or fewer than four spores form following conjugation and subsequent sporulation.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000121","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with more or fewer than four spores","synonyms":[{"name":"abnormal ascospore formation resulting in formation of asci with more or fewer than four spores","type":"exact"},{"name":"abnormal spore number","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci with more or fewer than four spores","type":"exact"}],"termid":"FYPO:0001894"}


id: FYPO:0006415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindles in adjacent dividing nuclei overlap during meiosis II.","definition_xrefs":["PMID:27304859","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0000120"],"is_obsolete":false,"name":"overlapping meiosis II spindles","synonyms":[{"name":"overlapping spindles at meiosis II","type":"exact"},{"name":"overlapping spindles during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006415"}


id: PBO:0045864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1A lysine methyltransferase 3","termid":"PBO:0045864"}


id: GO:0003813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Arg-Ser bond in complement component C3 alpha-chain to form C3a and C3b, and Arg bond in complement component C5 alpha-chain to form C5a and C5b.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete classical-complement-pathway C3/C5 convertase activity (obsolete GO:0003813)","synonyms":[{"name":"C3 convertase activity","type":"broad"},{"name":"C42","type":"related"},{"name":"C423","type":"related"},{"name":"C4b,2a","type":"related"},{"name":"C4b,2a,3b","type":"related"},{"name":"C5 convertase activity","type":"broad"},{"name":"classical-complement-pathway C3/C5 convertase activity","type":"exact"},{"name":"complement C2 activity","type":"broad"},{"name":"complement C3 convertase activity","type":"related"},{"name":"complement C42","type":"related"}],"termid":"GO:0003813"}


id: PBO:0078607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 61","termid":"PBO:0078607"}


id: PBO:0040107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylsphingosine amidohydrolase 2","termid":"PBO:0040107"}


id: PBO:0109137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3039","termid":"PBO:0109137"}


id: PBO:0087574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the 19S regulatory particle of the 26S proteasome lid; acts as a ubiquitin receptor for the proteasome; null mutants accumulate ubiquitinated Gcn4p and display decreased 26S proteasome stability; protein abundance increases in response to DNA replication stress","termid":"PBO:0087574"}


id: FYPO:0003236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from transposable element transcripts measured in a cell is lower than normal.","definition_xrefs":["PMID:24095277","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased transposable element-derived small RNA level","synonyms":[{"name":"decreased accumulation of transposable element-derived small RNAs","type":"related"},{"name":"decreased transposable element-derived small RNA accumulation","type":"related"},{"name":"decreased transposable element-derived small RNA level during mitotic cell cycle","type":"related"},{"name":"decreased transposable element-derived small RNA level during vegetative growth","type":"exact"},{"name":"decreased transposable element-derived small transcript level","type":"exact"},{"name":"decreased transposon-derived small RNA level","type":"exact"},{"name":"reduced transposable element-derived small RNA level","type":"exact"}],"termid":"FYPO:0003236"}


id: GO:0051086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of assisting in the correct noncovalent assembly of posttranslational proteins and does not depend on additional protein cofactors. This function occurs over one or more cycles of nucleotide-dependent binding and release.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"'de novo' post-translational protein folding","termid":"GO:0051084"},{"relation_name":"is_a","term_name":"chaperone-mediated protein folding","termid":"GO:0061077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"part_of","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467","GO:0006457"],"is_obsolete":false,"name":"chaperone mediated protein folding independent of cofactor","synonyms":[{"name":"chaperone cofactor-independent protein folding","type":"exact"}],"termid":"GO:0051086"}


id: GO:0021850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of glioblasts in the subpallium. These cells will give rise to oligodendrocytes.","definition_xrefs":["GOC:jid","PMID:12626695","GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioblast division","termid":"GO:0048860"},{"relation_name":"part_of","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium glioblast cell division","synonyms":[{"name":"glioblast cell division in subpallium","type":"exact"},{"name":"glioblast division in ventral telencephalon","type":"exact"}],"termid":"GO:0021850"}


id: PBO:0076489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 4","termid":"PBO:0076489"}


id: FYPO:0000070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of amphotericin B than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to amphotericin B","synonyms":[{"name":"resistance to amphotericin B during mitotic cell cycle","type":"related"},{"name":"resistance to amphotericin B during vegetative growth","type":"exact"},{"name":"resistant to amphotericin","type":"exact"}],"termid":"FYPO:0000070"}


id: PBO:0071309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 32","termid":"PBO:0071309"}


id: FYPO:0002199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal morphology (i.e. size, shape, and structure) but is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell morphology","termid":"FYPO:0001315"},{"relation_name":"is_a","term_name":"normal vegetative cell morphology","termid":"FYPO:0001315"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"inviable vegetative cell with normal cell morphology","synonyms":[{"name":"inviable cell with normal cell morphology during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with normal cell morphology during mitotic cell cycle","type":"related"},{"name":"inviable vegetative cell with normal cell shape and size","type":"exact"},{"name":"lethal; vegetative cell with normal cell morphology","type":"exact"}],"termid":"FYPO:0002199"}


id: MOD:01430
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms an adduct with a (13)C labeled compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O isotope tagged reagent","termid":"MOD:01430"}


id: GO:0040001
data:
  {"annotated_genes":["SJAG_02737","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113033,93087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the directed movement of the mitotic spindle to a specific location in the cell occurs.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of spindle localization","termid":"GO:0051293"},{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization involved in mitosis","termid":"GO:1902850"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"establishment of mitotic spindle localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030606","GO:0018986","GO:0030610","GO:0030605","GO:0030608"],"synonyms":[{"name":"establishment of mitotic spindle localisation","type":"exact"},{"name":"mitotic spindle positioning","type":"exact"},{"name":"mitotic spindle positioning and orientation","type":"narrow"},{"name":"mitotic spindle positioning or orientation","type":"exact"},{"name":"spindle positioning during mitosis","type":"related"},{"name":"spindle positioning involved in mitotic cell cycle","type":"exact"}],"termid":"GO:0040001","terms_by_termid":{"GO:0000132":null}}


id: PBO:0075716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serglycin","termid":"PBO:0075716"}


id: PBO:0070408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A2 pseudogene 2","termid":"PBO:0070408"}


id: PBO:0013749
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tuberous Sclerosis Complex","termid":"PBO:0013749"}


id: PBO:0056559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 7","termid":"PBO:0056559"}


id: PBO:0066815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 114","termid":"PBO:0066815"}


id: PBO:0078196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-6","termid":"PBO:0078196"}


id: PBO:0024826
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Arabidopsis thaliana AtSGP2","termid":"PBO:0024826"}


id: PBO:0068757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 2, pseudogene","termid":"PBO:0068757"}


id: PBO:0055379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2809","termid":"PBO:0055379"}


id: GO:0004581
data:
  {"annotated_genes":["SJAG_00394"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107180],"is_not":false,"summary":null,"term":"GO:0004581"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + dolichyl phosphate = UDP + dolichyl beta-D-glucosyl phosphate.","definition_xrefs":["EC:2.4.1.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00394":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dolichyl-phosphate beta-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446214","RHEA:15401","MetaCyc:2.4.1.117-RXN"],"synonyms":[{"name":"UDP-glucose dolichyl-phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichol phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolicholphosphoryl glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichyl monophosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichyl phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichyl-phosphate beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:dolichyl-phosphate beta-D-glucosyltransferase activity","type":"related"},{"name":"polyprenyl phosphate:UDP-D-glucose glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-dolichol glucosyltransferase activity","type":"related"}],"termid":"GO:0004581","terms_by_termid":{"GO:0004581":null}}


id: PBO:0078483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-3","termid":"PBO:0078483"}


id: PBO:0060608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCBP2 antisense 2 (head to head)","termid":"PBO:0060608"}


id: PATO:0001812
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A relaxation which is relatively low.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001812 decreased relaxation (obsolete PATO:0001812)","synonyms":[{"name":"low relaxation","type":"exact"}],"termid":"PATO:0001812"}


id: GO:1900859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of brevianamide F biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of brevianamide F biosynthetic process (obsolete GO:1900859)","synonyms":[{"name":"down regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"down-regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"downregulation of brevianamide F biosynthetic process","type":"exact"}],"termid":"GO:1900859"}


id: PBO:0090007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor for histones, zf-GATA-type Ams2","termid":"PBO:0090007"}


id: GO:0005672
data:
  {"annotated_genes":["SJAG_01710","SJAG_02174"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103777,113422],"is_not":false,"summary":null,"term":"GO:0005672"}]},"cv_name":"cellular_component","definition":"A component of the transcription machinery of RNA Polymerase II. In humans, TFIIA is a heterotrimer composed of an alpha (P35), beta (P19) and gamma subunits (P12).","definition_xrefs":["GOC:jl","PMID:17560669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01710":null,"SJAG_02174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"transcription factor TFIIA complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005672","terms_by_termid":{"GO:0005672":null}}


id: FYPO:0004220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which monomethylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone methylation during vegetative growth","termid":"FYPO:0000861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H4-K20 monomethylation during vegetative growth","synonyms":[{"name":"normal histone H4 K20 monomethylation during vegetative growth","type":"exact"},{"name":"normal histone H4-K20 monomethylation during mitotic cell cycle","type":"related"},{"name":"normal histone H4K20me1 during vegetative growth","type":"exact"},{"name":"normal histone lysine H4 K20 monomethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004220"}


id: MOD:01980
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N4-glycosyl-arginine.","definition_xrefs":["PubMed:9536051","PubMed:8521968","Unimod:41#R","PubMed:15279557","RESID:AA0327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycosylated residue","termid":"MOD:00006"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"omega-N-glycosyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-(beta-D-glucopyranosyl[imino(methylamino)methyl]amino)pentanoic acid","type":"exact"},{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"},{"name":"NG-beta-D-glucosylarginine","type":"exact"},{"name":"omega-N-(beta-D-glucosyl)-L-arginine","type":"exact"},{"name":"omega-N-glucosyl-L-arginine","type":"exact"},{"name":"omega-N-glycosyl-L-arginine","type":"exact"}],"termid":"MOD:01980"}


id: GO:0005696
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A complex of DNA and protein that seals the end of a chromosome. The telomeric DNA consists of simple tandemly repeated sequences specific for each species. Typically one strand is G-rich and the other C-rich. The G-rich strand forms a 3'-terminal overhang, the length of which varies with species. The single strand overhang is bound by a variety of proteins, including telomere capping proteins that bind to the single-stranded DNA.","definition_xrefs":["ISBN:0198506732","PMID:11352055"],"gene_count":0,"genotype_count":0,"name":"obsolete telomere (obsolete GO:0005696)","synonyms":[{"name":"telomere","type":"exact"}],"termid":"GO:0005696"}


id: PBO:0078020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 10","termid":"PBO:0078020"}


id: PR:Q9C1X5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP32A8.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C1X5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase P32A8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP32A8.02","synonyms":[{"name":"Spom972h-SPAP32A8.02","type":"exact"}],"termid":"PR:Q9C1X5"}


id: PR:O94653
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein BMS1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12858:SF2","PRO:DNx","OMA:SCHPO02379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein bms1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.06","secondary_identifiers":["UniProtKB:O94653"],"synonyms":[{"name":"Spom972h-BMS1","type":"exact"}],"termid":"PR:O94653"}


id: PBO:0078361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 6-1","termid":"PBO:0078361"}


id: GO:0061469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of type B pancreatic cell proliferation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"type B pancreatic cell proliferation","termid":"GO:0044342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type B pancreatic cell proliferation","termid":"GO:0061469"}


id: PBO:0051832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 6","termid":"PBO:0051832"}


id: GO:1990331
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tetrameric protein complex capable of acetyltransferase activity. It can catalyze the transfer of an acetyl group from acetyl-CoA to an acceptor residue on histone H-3, histone H-4, or on polyamines. The complex is also capable of acetylating certain small basic proteins. The two Hpa2 dimers that make up the tetramer are held together by interactions between the bound acetyl-CoA molecules.","definition_xrefs":["GOC:bhm","PMID:10600387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"},{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"Hpa2 acetyltransferase complex","termid":"GO:1990331"}


id: PBO:0084552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric regions; induced during alcoholic fermentation; induced by low temperature and also by anaerobic conditions; negatively regulated by oxygen and repressed by heme","termid":"PBO:0084552"}


id: PBO:0042664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 20","termid":"PBO:0042664"}


id: GO:1903216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein processing involved in protein targeting to mitochondrion.","definition_xrefs":["GO_REF:0000058","PMID:21370995","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"regulates","term_name":"protein processing involved in protein targeting to mitochondrion","termid":"GO:0006627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"regulation of protein processing involved in protein targeting to mitochondrion","synonyms":[{"name":"regulation of mitochondrial processing","type":"broad"},{"name":"regulation of mitochondrial protein processing during import","type":"related"}],"termid":"GO:1903216"}


id: GO:0016512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the formation of endothelin 1 by cleavage of the Trp21-Val22 bond in the precursor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endothelin-converting enzyme 1 activity (obsolete GO:0016512)","synonyms":[{"name":"ECE-1 activity","type":"related"},{"name":"endothelin-converting enzyme 1 activity","type":"exact"}],"termid":"GO:0016512"}


id: GO:0045936
data:
  {"annotated_genes":["SJAG_05314","SJAG_03940","SJAG_01187","SJAG_02380","SJAG_00685","SJAG_01906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72017,75002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[111564,107465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[105827,108843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving phosphates.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphorus metabolic process","termid":"GO:0010563"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"negatively_regulates","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_01187":null,"SJAG_01906":null,"SJAG_02380":null,"SJAG_03940":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of phosphate metabolic process","type":"exact"},{"name":"down-regulation of phosphate metabolic process","type":"exact"},{"name":"downregulation of phosphate metabolic process","type":"exact"},{"name":"inhibition of phosphate metabolic process","type":"narrow"},{"name":"negative regulation of phosphate metabolism","type":"exact"}],"termid":"GO:0045936","terms_by_termid":{"GO:0045820":null,"GO:0071072":null,"GO:2001211":null}}


id: PBO:0048160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 5","termid":"PBO:0048160"}


id: PBO:0031884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved mitochondrial protein (predicted)","termid":"PBO:0031884"}


id: PBO:0049740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit delta","termid":"PBO:0049740"}


id: PR:O59793
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bis1 gene.","definition_xrefs":["UniProtKB:O59793","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein bis1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.02c","synonyms":[{"name":"Spom972h-bis1","type":"exact"}],"termid":"PR:O59793"}


id: _global:imports
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"Holds between p and c when p is a transportation or localization process and the outcome of this process is to move c to a destination that is part of some s, where the start location of c is part of the region that surrounds s.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"transports","termid":"_global:transports"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imports","secondary_identifiers":["RO:0002340","GOREL:0000034"],"termid":"_global:imports"}


id: PBO:0027306
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_tRNA_genes","termid":"PBO:0027306"}


id: PBO:0075271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 24","termid":"PBO:0075271"}


id: FYPO:0005573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nuclear transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nuclear transport","synonyms":[{"name":"nuclear transport: abnormal","type":"related"}],"termid":"FYPO:0005573"}


id: GO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of B cells in the bone marrow.","definition_xrefs":["GOC:jal","PMID:16460922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central tolerance induction","termid":"GO:0002508"},{"relation_name":"is_a","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell tolerance induction","synonyms":[{"name":"central B lymphocyte tolerance induction","type":"exact"},{"name":"central B-cell tolerance induction","type":"exact"},{"name":"central B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002510"}


id: PBO:0054668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2074","termid":"PBO:0054668"}


id: PBO:0038349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-kleptoparasite_of","termid":"PBO:0038349"}


id: PBO:0065599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 15","termid":"PBO:0065599"}


id: PBO:0035695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in_or_involved_in_regulation_of","termid":"PBO:0035695"}


id: FYPO:0002347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly is abnormal.","definition_xrefs":["PMID:21098141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal stress granule assembly","termid":"FYPO:0007318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal stress granule assembly during vegetative growth","synonyms":[{"name":"abnormal cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"abnormal stress granule assembly during mitotic cell cycle","type":"related"},{"name":"abnormal stress granule formation during vegetative growth","type":"exact"}],"termid":"FYPO:0002347"}


id: GO:0016678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a heme group acts as a hydrogen or electron donor and reduces an acceptor other than a nitrogenous group or oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on heme group of donors, other acceptors (obsolete GO:0016678)","synonyms":[{"name":"oxidoreductase activity, acting on haem group of donors, other acceptors","type":"exact"},{"name":"oxidoreductase activity, acting on heme group of donors, other acceptors","type":"exact"}],"termid":"GO:0016678"}


id: PBO:0057542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 658","termid":"PBO:0057542"}


id: GO:0050052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + leukotriene E(4) + NADPH + O2 = 20-hydroxy-leukotriene E(4) + H2O + NADP+.","definition_xrefs":["RHEA:24120","EC:1.14.13.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"leukotriene-E4 20-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R04256","MetaCyc:LEUKOTRIENE-E4-20-MONOOXYGENASE-RXN"],"synonyms":[{"name":"(7E,9E,11Z,14Z)-(5S,6R)-6-(cystein-S-yl)-5-hydroxyicosa-7,9,11,14-tetraenoate,NADPH:oxygen oxidoreductase (20-hydroxylating)","type":"related"},{"name":"leukotriene-E(4) omega-hydroxylase activity","type":"related"},{"name":"leukotriene-E4 omega-hydroxylase activity","type":"related"},{"name":"leukotriene-E4 w-hydroxylase activity","type":"exact"}],"termid":"GO:0050052"}


id: FYPO:0005183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the polyubiquitination of one or more specific proteins, or of specific protein sites, does not occur when the cell is exposed to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein polyubiquitination during vegetative growth","termid":"FYPO:0005928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein polyubiquitination during cellular response to UV","synonyms":[{"name":"abolished protein polyubiquitination during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"abolished protein polyubiquitination during cellular response to UV during vegetative growth","type":"exact"},{"name":"abolished protein polyubiquitination during cellular response to ultraviolet light","type":"exact"},{"name":"abolished protein polyubiquitinylation during cellular response to UV","type":"related"},{"name":"abolished protein polyubiquitylation during cellular response to UV","type":"exact"},{"name":"protein polyubiquitination abolished during cellular response to UV","type":"exact"}],"termid":"FYPO:0005183"}


id: GO:0019648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway in which formaldehyde is used as a carbon source in the xylulose monophosphate cycle. Methylotrophic yeasts, but not bacteria, utilize the xylulose monophosphate cycle to fix formaldehyde and convert it into metabolically useful organic compounds.","definition_xrefs":["MetaCyc:P185-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formaldehyde assimilation","termid":"GO:0019649"},{"relation_name":"is_a","term_name":"xylulose 5-phosphate metabolic process","termid":"GO:0051167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formaldehyde assimilation via xylulose monophosphate cycle","synonyms":[{"name":"formaldehyde assimilation via xylulose-5-phosphate cycle","type":"exact"},{"name":"formaldehyde fixation cycle","type":"exact"}],"termid":"GO:0019648"}


id: PBO:0046586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 28","termid":"PBO:0046586"}


id: SO:0000942
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An integration/excision site of a phage chromosome at which a recombinase acts to insert the phage DNA at a cognate integration/excision site on a bacterial chromosome.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"},{"relation_name":"part_of","term_name":"phage_sequence","termid":"SO:0001042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attP_site","synonyms":[{"name":"attP site","type":"exact"}],"termid":"SO:0000942"}


id: GO:0018328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-histidine to form 3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine).","definition_xrefs":["RESID:AA0036"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via 3'-phospho-L-histidine (obsolete GO:0018328)","termid":"GO:0018328"}


id: PBO:0047929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(q23.3)","termid":"PBO:0047929"}


id: PR:Q10342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SDA1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02440","PANTHER:PTHR12730:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sda1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.14c","secondary_identifiers":["UniProtKB:Q10342"],"synonyms":[{"name":"Spom972h-SDAD1","type":"exact"}],"termid":"PR:Q10342"}


id: GO:0019630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving quinate, the anion of quinic acid. The acid occurs commonly in plants, either free or as esters, and is used as a medicine.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"quinate metabolic process","synonyms":[{"name":"quinate metabolism","type":"exact"},{"name":"quinic acid metabolic process","type":"exact"},{"name":"quinic acid metabolism","type":"exact"}],"termid":"GO:0019630"}


id: PBO:0045860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 50","termid":"PBO:0045860"}


id: PBO:0074099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 2","termid":"PBO:0074099"}


id: GO:0043149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a stress fiber. A stress fiber is a contractile actin filament bundle that consists of short actin filaments with alternating polarity.","definition_xrefs":["GOC:go_curators","GOC:mah","PMID:16651381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractile actin filament bundle assembly","termid":"GO:0030038"},{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0044085","GO:0030036"],"is_obsolete":false,"name":"stress fiber assembly","synonyms":[{"name":"actin cable assembly","type":"related"},{"name":"actin cable formation","type":"related"},{"name":"stress fibre biosynthesis","type":"related"},{"name":"stress fibre formation","type":"related"}],"termid":"GO:0043149"}


id: SO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the reduction of a the 5'UTR with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_truncation","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"5 prime UTR truncation","type":"exact"},{"name":"Jannovar:5_prime_utr_truncation","type":"exact"},{"name":"snpEff:UTR_5_DELETED","type":"exact"}],"termid":"SO:0002013"}


id: GO:0065003
data:
  {"annotated_genes":["SJAG_01759","SJAG_00313","SJAG_02455","SJAG_01296","SJAG_01707","SJAG_03183","SJAG_02843","SJAG_04038","SJAG_00766","SJAG_01526","SJAG_02566","SJAG_03773","SJAG_04879","SJAG_02672","SJAG_04982","SJAG_02119","SJAG_00225","SJAG_00307","SJAG_04497","SJAG_04669","SJAG_04898","SJAG_00278","SJAG_06514","SJAG_04197","SJAG_02754","SJAG_01503","SJAG_07018","SJAG_03220","SJAG_04638","SJAG_01268","SJAG_04530","SJAG_02279","SJAG_01654","SJAG_02335","SJAG_00217","SJAG_05398","SJAG_00323","SJAG_02700","SJAG_03099","SJAG_04290","SJAG_03496","SJAG_01547","SJAG_04529","SJAG_05321","SJAG_01215","SJAG_02737","SJAG_04911","SJAG_04008","SJAG_00939","SJAG_03685","SJAG_02607","SJAG_03798","SJAG_04891","SJAG_02886","SJAG_00873","SJAG_05305","SJAG_00596","SJAG_03995","SJAG_00513","SJAG_04074","SJAG_02830","SJAG_02198","SJAG_04450","SJAG_00949","SJAG_01606","SJAG_00279","SJAG_01939","SJAG_01504","SJAG_03540","SJAG_03666","SJAG_02477","SJAG_05223","SJAG_00284","SJAG_01454","SJAG_04395","SJAG_04844","SJAG_00474","SJAG_01217","SJAG_02664","SJAG_04093","SJAG_00741","SJAG_01819","SJAG_03867","SJAG_02185","SJAG_03070","SJAG_03954","SJAG_03221","SJAG_02040","SJAG_02229","SJAG_05003","SJAG_02628","SJAG_02624","SJAG_04899","SJAG_04947","SJAG_04995","SJAG_01894","SJAG_00722","SJAG_00954","SJAG_00087","SJAG_04177","SJAG_03036","SJAG_03424","SJAG_02759","SJAG_00771","SJAG_03285","SJAG_03125","SJAG_03214","SJAG_00466","SJAG_02081","SJAG_01838","SJAG_02691","SJAG_03894","SJAG_05195","SJAG_06392","SJAG_02079","SJAG_02975","SJAG_03046","SJAG_00449","SJAG_05231","SJAG_01410","SJAG_05297","SJAG_02558","SJAG_04163","SJAG_04154","SJAG_03012","SJAG_03782","SJAG_00906","SJAG_00327","SJAG_00523","SJAG_02513","SJAG_02813","SJAG_06135","SJAG_04639","SJAG_04981","SJAG_02303","SJAG_04992","SJAG_04012","SJAG_01545","SJAG_06002","SJAG_00752","SJAG_00322","SJAG_00414","SJAG_00841","SJAG_04214","SJAG_03120","SJAG_04744","SJAG_04108","SJAG_04586","SJAG_01895","SJAG_02184","SJAG_02436","SJAG_01420","SJAG_00703","SJAG_03421","SJAG_04479","SJAG_02361","SJAG_03199","SJAG_06046","SJAG_05240","SJAG_03784","SJAG_01756","SJAG_04654","SJAG_04492","SJAG_03323","SJAG_05302","SJAG_03403","SJAG_04847","SJAG_00852","SJAG_05679","SJAG_02667","SJAG_07005","SJAG_03469","SJAG_01996","SJAG_01122","SJAG_01339","SJAG_00911","SJAG_00756","SJAG_00684","SJAG_01870","SJAG_03466","SJAG_04454","SJAG_04989","SJAG_00856","SJAG_02979","SJAG_03217","SJAG_02304","SJAG_02570","SJAG_01811","SJAG_01315","SJAG_02868","SJAG_00505","SJAG_05273","SJAG_02427","SJAG_02456","SJAG_00689","SJAG_02906","SJAG_01808","SJAG_02508","SJAG_03086","SJAG_04272","SJAG_03296","SJAG_04538","SJAG_01282","SJAG_04547","SJAG_01015","SJAG_00718","SJAG_00859","SJAG_00983","SJAG_02708","SJAG_00152","SJAG_05306","SJAG_02761","SJAG_04524","SJAG_05009","SJAG_01405","SJAG_02609","SJAG_00662","SJAG_02840","SJAG_02376","SJAG_03399","SJAG_04066","SJAG_01487","SJAG_01141","SJAG_00126","SJAG_02295","SJAG_03956","SJAG_03416","SJAG_00757","SJAG_00498","SJAG_01611","SJAG_02469","SJAG_03095","SJAG_01161","SJAG_02573","SJAG_01771","SJAG_04602","SJAG_01823","SJAG_00677","SJAG_02872","SJAG_00912","SJAG_01214","SJAG_02465","SJAG_02908","SJAG_02074","SJAG_02267","SJAG_01200","SJAG_01301","SJAG_00045","SJAG_01440","SJAG_04615","SJAG_02749","SJAG_02245","SJAG_02803","SJAG_00147","SJAG_03458","SJAG_04355","SJAG_01475","SJAG_01523","SJAG_03900","SJAG_01548","SJAG_02058","SJAG_03279","SJAG_05979","SJAG_02390","SJAG_03873","SJAG_01837","SJAG_00692","SJAG_03463","SJAG_04603","SJAG_02340","SJAG_04998","SJAG_02263","SJAG_04230","SJAG_03835","SJAG_03905","SJAG_04375","SJAG_02164","SJAG_01833","SJAG_04560","SJAG_04257","SJAG_02995","SJAG_01708","SJAG_04534","SJAG_03617","SJAG_02915","SJAG_00643","SJAG_04176","SJAG_01839","SJAG_04304","SJAG_04553","SJAG_03147","SJAG_05199","SJAG_00058","SJAG_00301","SJAG_02480","SJAG_01169","SJAG_01993","SJAG_03080","SJAG_01568","SJAG_01652","SJAG_03472","SJAG_04348","SJAG_05248","SJAG_02479","SJAG_02174","SJAG_04180","SJAG_00521","SJAG_00353","SJAG_03619","SJAG_04004","SJAG_00882","SJAG_04531","SJAG_03551","SJAG_01327","SJAG_04940","SJAG_04900","SJAG_03007","SJAG_02952","SJAG_01567","SJAG_04696","SJAG_03048","SJAG_04100","SJAG_04581","SJAG_03322","SJAG_01008","SJAG_01761","SJAG_02270","SJAG_04746","SJAG_04599","SJAG_04274","SJAG_00572","SJAG_00247","SJAG_00984","SJAG_01140","SJAG_01378","SJAG_01207","SJAG_02458","SJAG_04116","SJAG_07008","SJAG_00973","SJAG_02535","SJAG_03983","SJAG_03337","SJAG_03574","SJAG_00663","SJAG_01152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94937,64194,89926,88419,93833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[98621,99614,96835,111862,89299,112258,88483,96691,94088,108238,103531,111861,112748,107534,108998,85749,114957,95281,102085,106904,96505,105106,88901],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1902626"},{"annotations":[113030],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030954"},{"annotations":[88420,94998,84392,110414],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[97791,100154,108338,113742,93596,94057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000492"},{"annotations":[104698,108775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000493"},{"annotations":[86182,111172,98166,91579,107271,113767,95242,99009,88886,90800,95490,102444,85001,103439,85812,109219,112565,110316,114909,114875],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034080"},{"annotations":[96988,92865,89359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051131"},{"annotations":[113902],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000354"},{"annotations":[95420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048268"},{"annotations":[106039,111489,109664,103441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140529"},{"annotations":[91624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048208"},{"annotations":[90545,103574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018063"},{"annotations":[113046,101660,84198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017004"},{"annotations":[95559,112671,98004,100384,101297,100890,111441,98005,90940,93178,100155,112672,100235,88196,94089,106834,111442,83787,106833,98622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180023"},{"annotations":[96643,88763,103759,106391,95157,98296,92281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000730"},{"annotations":[97206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905143"},{"annotations":[107432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070196"},{"annotations":[101403,90893,101696,106797,107433,92963,86064,91976,95030,96202,93903,93843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001732"},{"annotations":[114122,92193,92692,101500,100159,104864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001731"},{"annotations":[96790,101857,102486],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000349"},{"annotations":[104962,105645,100937,110455],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000350"},{"annotations":[86891,101634,106409,113524,108280,101561,109651],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0051382"},{"annotations":[96188,100623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903359"},{"annotations":[99425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140530"},{"annotations":[93028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[106397,103764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"},{"annotations":[104947,105710,106680],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[113272,96183,96485,97088,102529,113035],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[114729,97089],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"},{"annotations":[114214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046785"},{"annotations":[113140,85155,98662,99867,85342,103265,113295,93469,91744,98192,88184,97799,87752,90761,98225,90776,100120,102953,103469,103581,111124,114414,84991,100366,110785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033617"},{"annotations":[104479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902775"},{"annotations":[87014,106502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070096"},{"annotations":[85169,105822,96785,112752,92957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033615"},{"annotations":[95350,103586,109225,84385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034553"},{"annotations":[103695,104722,108950,113132,95107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034551"},{"annotations":[86556,95524,106657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902977"},{"annotations":[99427,111111,106658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"},{"annotations":[97349,104963],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000389"},{"annotations":[106753,91287,98650,91033,87665,111337,101960,108465,106728,91715,90106,106161,93946,106743,109379,98810],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000395"},{"annotations":[99311],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000348"},{"annotations":[103034,73380],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006376"},{"annotations":[97000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010257"},{"annotations":[114015],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905560"},{"annotations":[103866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051292"},{"annotations":[110634,103833,91178,92555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006334"},{"annotations":[105078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006294"},{"annotations":[85773,112772,98481],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905561"},{"annotations":[101775,84351],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001178"},{"annotations":[85832,111278],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045899"},{"annotations":[100441,110940,86072,112431,93211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043248"},{"annotations":[92158,95582,111821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070682"},{"annotations":[107203,92306,107202,92307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022618"},{"annotations":[106242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043461"},{"annotations":[112647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070070"},{"annotations":[97852,85951,98842,86791,101248],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"},{"annotations":[106214,104828],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0003400"},{"annotations":[114257,111803,99780,101639,98587,98588,97309,93590,89460,113846,93591,111736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000027"},{"annotations":[102897,107505,99966,97830,101759,107506,101758,73751,107874,102898,112530,114675,97832,107710,107709,93530,96567,97831,108173,92677,93529,107708,90862,86003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000028"},{"annotations":[110400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904802"},{"annotations":[102567,114123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990113"},{"annotations":[105249,91852,63519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001188"},{"annotations":[98303,114124,102568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990114"},{"annotations":[83521,111470,113423,64326,85400,84477,84737,86032,90249,66518,104593,92140,110888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051123"},{"annotations":[102569,114125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990115"},{"annotations":[112302,99170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070898"},{"annotations":[85367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010265"},{"annotations":[100026,96216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000921"},{"annotations":[93836,110417],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042989"},{"annotations":[103720,109176],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0034462"},{"annotations":[101796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035493"},{"annotations":[104862,97844,107228,89471,107020,101577,99313,91445,74852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000245"},{"annotations":[94128,96732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000393"},{"annotations":[97404,92951,109380,92089,87749,105083,91289,85594,98652,91717,106163,100637,106730,111207,104636,101962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000387"},{"annotations":[93518,102641,110481,98293,107803,108347,101578,94129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000244"},{"annotations":[96733],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000388"},{"annotations":[110461,111220,87728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006617"},{"annotations":[86750,86749,104030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904868"},{"annotations":[111962,111029,112506,102429,91937,104637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905323"},{"annotations":[104218,112039,95823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905324"},{"annotations":[89590,93619,102329,84724,96668,89353,92663,92867,98554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007021"},{"annotations":[102853,108548,109956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903241"},{"annotations":[98087,109222,106261,110288,114386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070072"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of macromolecules to form a protein-containing complex.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"}],"gene_count":346,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00058":null,"SJAG_00087":null,"SJAG_00126":null,"SJAG_00147":null,"SJAG_00152":null,"SJAG_00217":null,"SJAG_00225":null,"SJAG_00247":null,"SJAG_00278":null,"SJAG_00279":null,"SJAG_00284":null,"SJAG_00301":null,"SJAG_00307":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00323":null,"SJAG_00327":null,"SJAG_00353":null,"SJAG_00414":null,"SJAG_00449":null,"SJAG_00466":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00505":null,"SJAG_00513":null,"SJAG_00521":null,"SJAG_00523":null,"SJAG_00572":null,"SJAG_00596":null,"SJAG_00643":null,"SJAG_00662":null,"SJAG_00663":null,"SJAG_00677":null,"SJAG_00684":null,"SJAG_00689":null,"SJAG_00692":null,"SJAG_00703":null,"SJAG_00718":null,"SJAG_00722":null,"SJAG_00741":null,"SJAG_00752":null,"SJAG_00756":null,"SJAG_00757":null,"SJAG_00766":null,"SJAG_00771":null,"SJAG_00841":null,"SJAG_00852":null,"SJAG_00856":null,"SJAG_00859":null,"SJAG_00873":null,"SJAG_00882":null,"SJAG_00906":null,"SJAG_00911":null,"SJAG_00912":null,"SJAG_00939":null,"SJAG_00949":null,"SJAG_00954":null,"SJAG_00973":null,"SJAG_00983":null,"SJAG_00984":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01122":null,"SJAG_01140":null,"SJAG_01141":null,"SJAG_01152":null,"SJAG_01161":null,"SJAG_01169":null,"SJAG_01200":null,"SJAG_01207":null,"SJAG_01214":null,"SJAG_01215":null,"SJAG_01217":null,"SJAG_01268":null,"SJAG_01282":null,"SJAG_01296":null,"SJAG_01301":null,"SJAG_01315":null,"SJAG_01327":null,"SJAG_01339":null,"SJAG_01378":null,"SJAG_01405":null,"SJAG_01410":null,"SJAG_01420":null,"SJAG_01440":null,"SJAG_01454":null,"SJAG_01475":null,"SJAG_01487":null,"SJAG_01503":null,"SJAG_01504":null,"SJAG_01523":null,"SJAG_01526":null,"SJAG_01545":null,"SJAG_01547":null,"SJAG_01548":null,"SJAG_01567":null,"SJAG_01568":null,"SJAG_01606":null,"SJAG_01611":null,"SJAG_01652":null,"SJAG_01654":null,"SJAG_01707":null,"SJAG_01708":null,"SJAG_01756":null,"SJAG_01759":null,"SJAG_01761":null,"SJAG_01771":null,"SJAG_01808":null,"SJAG_01811":null,"SJAG_01819":null,"SJAG_01823":null,"SJAG_01833":null,"SJAG_01837":null,"SJAG_01838":null,"SJAG_01839":null,"SJAG_01870":null,"SJAG_01894":null,"SJAG_01895":null,"SJAG_01939":null,"SJAG_01993":null,"SJAG_01996":null,"SJAG_02040":null,"SJAG_02058":null,"SJAG_02074":null,"SJAG_02079":null,"SJAG_02081":null,"SJAG_02119":null,"SJAG_02164":null,"SJAG_02174":null,"SJAG_02184":null,"SJAG_02185":null,"SJAG_02198":null,"SJAG_02229":null,"SJAG_02245":null,"SJAG_02263":null,"SJAG_02267":null,"SJAG_02270":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02303":null,"SJAG_02304":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02361":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02455":null,"SJAG_02456":null,"SJAG_02458":null,"SJAG_02465":null,"SJAG_02469":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02480":null,"SJAG_02508":null,"SJAG_02513":null,"SJAG_02535":null,"SJAG_02558":null,"SJAG_02566":null,"SJAG_02570":null,"SJAG_02573":null,"SJAG_02607":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02628":null,"SJAG_02664":null,"SJAG_02667":null,"SJAG_02672":null,"SJAG_02691":null,"SJAG_02700":null,"SJAG_02708":null,"SJAG_02737":null,"SJAG_02749":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02761":null,"SJAG_02803":null,"SJAG_02813":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02843":null,"SJAG_02868":null,"SJAG_02872":null,"SJAG_02886":null,"SJAG_02906":null,"SJAG_02908":null,"SJAG_02915":null,"SJAG_02952":null,"SJAG_02975":null,"SJAG_02979":null,"SJAG_02995":null,"SJAG_03007":null,"SJAG_03012":null,"SJAG_03036":null,"SJAG_03046":null,"SJAG_03048":null,"SJAG_03070":null,"SJAG_03080":null,"SJAG_03086":null,"SJAG_03095":null,"SJAG_03099":null,"SJAG_03120":null,"SJAG_03125":null,"SJAG_03147":null,"SJAG_03183":null,"SJAG_03199":null,"SJAG_03214":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03221":null,"SJAG_03279":null,"SJAG_03285":null,"SJAG_03296":null,"SJAG_03322":null,"SJAG_03323":null,"SJAG_03337":null,"SJAG_03399":null,"SJAG_03403":null,"SJAG_03416":null,"SJAG_03421":null,"SJAG_03424":null,"SJAG_03458":null,"SJAG_03463":null,"SJAG_03466":null,"SJAG_03469":null,"SJAG_03472":null,"SJAG_03496":null,"SJAG_03540":null,"SJAG_03551":null,"SJAG_03574":null,"SJAG_03617":null,"SJAG_03619":null,"SJAG_03666":null,"SJAG_03685":null,"SJAG_03773":null,"SJAG_03782":null,"SJAG_03784":null,"SJAG_03798":null,"SJAG_03835":null,"SJAG_03867":null,"SJAG_03873":null,"SJAG_03894":null,"SJAG_03900":null,"SJAG_03905":null,"SJAG_03954":null,"SJAG_03956":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04004":null,"SJAG_04008":null,"SJAG_04012":null,"SJAG_04038":null,"SJAG_04066":null,"SJAG_04074":null,"SJAG_04093":null,"SJAG_04100":null,"SJAG_04108":null,"SJAG_04116":null,"SJAG_04154":null,"SJAG_04163":null,"SJAG_04176":null,"SJAG_04177":null,"SJAG_04180":null,"SJAG_04197":null,"SJAG_04214":null,"SJAG_04230":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04274":null,"SJAG_04290":null,"SJAG_04304":null,"SJAG_04348":null,"SJAG_04355":null,"SJAG_04375":null,"SJAG_04395":null,"SJAG_04450":null,"SJAG_04454":null,"SJAG_04479":null,"SJAG_04492":null,"SJAG_04497":null,"SJAG_04524":null,"SJAG_04529":null,"SJAG_04530":null,"SJAG_04531":null,"SJAG_04534":null,"SJAG_04538":null,"SJAG_04547":null,"SJAG_04553":null,"SJAG_04560":null,"SJAG_04581":null,"SJAG_04586":null,"SJAG_04599":null,"SJAG_04602":null,"SJAG_04603":null,"SJAG_04615":null,"SJAG_04638":null,"SJAG_04639":null,"SJAG_04654":null,"SJAG_04669":null,"SJAG_04696":null,"SJAG_04744":null,"SJAG_04746":null,"SJAG_04844":null,"SJAG_04847":null,"SJAG_04879":null,"SJAG_04891":null,"SJAG_04898":null,"SJAG_04899":null,"SJAG_04900":null,"SJAG_04911":null,"SJAG_04940":null,"SJAG_04947":null,"SJAG_04981":null,"SJAG_04982":null,"SJAG_04989":null,"SJAG_04992":null,"SJAG_04995":null,"SJAG_04998":null,"SJAG_05003":null,"SJAG_05009":null,"SJAG_05195":null,"SJAG_05199":null,"SJAG_05223":null,"SJAG_05231":null,"SJAG_05240":null,"SJAG_05248":null,"SJAG_05273":null,"SJAG_05297":null,"SJAG_05302":null,"SJAG_05305":null,"SJAG_05306":null,"SJAG_05321":null,"SJAG_05398":null,"SJAG_05679":null,"SJAG_05979":null,"SJAG_06002":null,"SJAG_06046":null,"SJAG_06135":null,"SJAG_06392":null,"SJAG_06514":null,"SJAG_07005":null,"SJAG_07008":null,"SJAG_07018":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"protein-containing complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0006461","GO:0034622","GO:0043623"],"synonyms":[{"name":"cellular macromolecule complex assembly","type":"related"},{"name":"cellular protein complex assembly","type":"exact"},{"name":"cellular protein-containing complex assembly","type":"related"},{"name":"chaperone activity","type":"related"},{"name":"macromolecular complex assembly","type":"related"},{"name":"macromolecule complex assembly","type":"related"},{"name":"protein complex assembly","type":"related"},{"name":"protein complex formation","type":"related"}],"termid":"GO:0065003","terms_by_termid":{"GO:0000027":null,"GO:0000028":null,"GO:0000244":null,"GO:0000245":null,"GO:0000348":null,"GO:0000349":null,"GO:0000350":null,"GO:0000354":null,"GO:0000387":null,"GO:0000388":null,"GO:0000389":null,"GO:0000393":null,"GO:0000395":null,"GO:0000492":null,"GO:0000493":null,"GO:0000707":null,"GO:0000730":null,"GO:0000921":null,"GO:0001188":null,"GO:0001731":null,"GO:0001732":null,"GO:0003400":null,"GO:0006294":null,"GO:0006334":null,"GO:0006376":null,"GO:0006617":null,"GO:0007020":null,"GO:0007021":null,"GO:0010257":null,"GO:0010265":null,"GO:0010772":null,"GO:0017004":null,"GO:0018063":null,"GO:0022618":null,"GO:0030041":null,"GO:0030833":null,"GO:0030954":null,"GO:0033615":null,"GO:0033617":null,"GO:0034080":null,"GO:0034462":null,"GO:0034551":null,"GO:0034553":null,"GO:0035493":null,"GO:0042989":null,"GO:0043248":null,"GO:0043461":null,"GO:0045899":null,"GO:0046785":null,"GO:0048208":null,"GO:0048268":null,"GO:0051016":null,"GO:0051123":null,"GO:0051131":null,"GO:0051292":null,"GO:0051382":null,"GO:0051415":null,"GO:0051417":null,"GO:0070070":null,"GO:0070072":null,"GO:0070096":null,"GO:0070196":null,"GO:0070682":null,"GO:0070898":null,"GO:0140529":null,"GO:0140530":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null,"GO:1902977":null,"GO:1902985":null,"GO:1903241":null,"GO:1903359":null,"GO:1904802":null,"GO:1904868":null,"GO:1905143":null,"GO:1905323":null,"GO:1905324":null,"GO:1905560":null,"GO:1905561":null,"GO:1990113":null,"GO:1990114":null,"GO:1990115":null,"GO:2001178":null}}


id: GO:0030938
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XVIII) chains.","definition_xrefs":["PMID:21421911","ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basement membrane collagen trimer","termid":"GO:0098651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XVIII trimer","termid":"GO:0030938"}


id: PBO:0063633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 11","termid":"PBO:0063633"}


id: GO:0072208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of smooth muscle in the metanephros over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney smooth muscle tissue development","termid":"GO:0072194"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric smooth muscle tissue development","termid":"GO:0072208"}


id: GO:0061185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of embryonic development","termid":"GO:0045992"},{"relation_name":"is_a","term_name":"regulation of dermatome development","termid":"GO:0061183"},{"relation_name":"negatively_regulates","term_name":"dermatome development","termid":"GO:0061054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dermatome development","termid":"GO:0061185"}


id: PBO:0000784
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.-","termid":"PBO:0000784"}


id: PBO:0061593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTRK3 antisense RNA 1","termid":"PBO:0061593"}


id: PBO:0043593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXIII alpha 1 chain","termid":"PBO:0043593"}


id: PBO:0048528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 4","termid":"PBO:0048528"}


id: PBO:0045873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 6","termid":"PBO:0045873"}


id: PBO:0088227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L8/L2","termid":"PBO:0088227"}


id: GO:0043040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in nonribosomal peptide synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation","termid":"GO:0043039"},{"relation_name":"is_a","term_name":"amino acid activation for nonribosomal peptide biosynthetic process","termid":"GO:0043041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA aminoacylation for nonribosomal peptide biosynthetic process","synonyms":[{"name":"tRNA aminoacylation for nonribosomal peptide anabolism","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide biosynthesis","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide formation","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide synthesis","type":"exact"}],"termid":"GO:0043040"}


id: PBO:0003628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Prp5","termid":"PBO:0003628"}


id: PR:Q9UT10
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ski7 gene.","definition_xrefs":["UniProtKB:Q9UT10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GTP-binding protein P8A3.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.05","synonyms":[{"name":"Spom972h-ski7","type":"exact"}],"termid":"PR:Q9UT10"}


id: PBO:0026860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_chromosome_arm_condensation","termid":"PBO:0026860"}


id: PBO:0044132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP1 antisense RNA","termid":"PBO:0044132"}


id: PBO:0001365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase (predicted)","termid":"PBO:0001365"}


id: PBO:0068540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 143, pseudogene","termid":"PBO:0068540"}


id: PBO:0067190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 252, pseudogene","termid":"PBO:0067190"}


id: FYPO:0005979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin filament bundle organization is abnormal. The process normally results in the assembly, arrangement of constituent parts, or disassembly of an actin filament bundle. Actin filament bundles are assemblies of actin filaments organized along a single axis.","definition_xrefs":["PomBase:mah","GO:0061572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament organization during vegetative growth","termid":"FYPO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004803","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal actin filament bundle organization","synonyms":[{"name":"abnormal actin filament bundle organisation during vegetative growth","type":"exact"},{"name":"abnormal actin filament bundle organization during mitotic cell cycle","type":"related"},{"name":"abnormal actin filament bundle organization during vegetative growth","type":"exact"}],"termid":"FYPO:0005979"}


id: PBO:0064312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 1","termid":"PBO:0064312"}


id: GO:0002003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the attainment of the full functional capacity of angiotensin by conversion of angiotensinogen into mature angiotensin in the blood.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"},{"relation_name":"part_of","term_name":"regulation of angiotensin levels in blood","termid":"GO:0002002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"angiotensin maturation","secondary_identifiers":["GO:0002005"],"synonyms":[{"name":"angiotensin catabolic process in blood","type":"narrow"}],"termid":"GO:0002003"}


id: PR:O42991
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1601 gene.","definition_xrefs":["UniProtKB:O42991","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L16-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.13c","synonyms":[{"name":"Spom972h-rpl1601","type":"exact"}],"termid":"PR:O42991"}


id: PBO:0046900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 24 member A","termid":"PBO:0046900"}


id: PBO:0063991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 25","termid":"PBO:0063991"}


id: PBO:0049034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 21","termid":"PBO:0049034"}


id: GO:0019452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including taurine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process","termid":"GO:0019448"},{"relation_name":"is_a","term_name":"taurine metabolic process","termid":"GO:0019530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-cysteine catabolic process to taurine","synonyms":[{"name":"L-cysteine breakdown to taurine","type":"exact"},{"name":"L-cysteine degradation to taurine","type":"exact"}],"termid":"GO:0019452"}


id: GO:0030269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyltetrahydromethanopterin + coenzyme M = 5,6,7,8-tetrahydromethanopterin + methyl-coenzyme M. 2-(methylthio)ethanesulfonate is also known as methyl-CoM.","definition_xrefs":["RHEA:53492","EC:2.1.1.86"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"5-methyl-5,6,7,8-tetrahydromethanopterin-dependent methyltransferase activity","termid":"GO:0042086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"tetrahydromethanopterin S-methyltransferase activity","secondary_identifiers":["UM-BBD_reactionID:r0355","GO:0018709","MetaCyc:2.1.1.86-RXN","KEGG_REACTION:R04347"],"synonyms":[{"name":"5-methyl-5,6,7,8-tetrahydromethanopterin:2-mercaptoethanesulfonate 2-methyltransferase activity","type":"related"},{"name":"N(5)-methyltetrahydromethanopterin--coenzyme M methyltransferase activity","type":"related"},{"name":"N5-methyltetrahydromethanopterin--coenzyme M methyltransferase activity","type":"related"},{"name":"tetrahydromethanopterin methyltransferase activity","type":"related"}],"termid":"GO:0030269"}


id: PBO:0080158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valosin containing protein lysine methyltransferase","termid":"PBO:0080158"}


id: PBO:0027430
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_damage_at_stalled_replication_fork","termid":"PBO:0027430"}


id: PBO:0063761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhomeotic homolog 2","termid":"PBO:0063761"}


id: PBO:0045890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 2","termid":"PBO:0045890"}


id: PBO:0080120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAC14 component of PIKFYVE complex","termid":"PBO:0080120"}


id: FYPO:0002654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which exocytic vesicles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"enlarged exocytic vesicles","synonyms":[{"name":"enlarged exocytic vesicles during mitotic cell cycle","type":"related"},{"name":"enlarged exocytic vesicles during vegetative growth","type":"exact"}],"termid":"FYPO:0002654"}


id: GO:0090722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The aggregation, arrangement and bonding together of two or more different receptor complexes that individually undergo combination with a hormone, neurotransmitter, drug or intracellular messenger to form a higher level receptor complex. The formation of the higher level complex initiates a change in cell function.","definition_xrefs":["PMID:22035699","GOC:dox","GOC:pad","PMID:24157794","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"receptor-receptor interaction","synonyms":[{"name":"hetero-receptor complex formation","type":"exact"}],"termid":"GO:0090722"}


id: SO:0002012
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A codon variant that changes at least one base of the canonical start codon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"initiator_codon_variant","termid":"SO:0001582"},{"relation_name":"is_a","term_name":"nonsynonymous_variant","termid":"SO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"start_lost","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:start_lost","type":"exact"},{"name":"VEP:start_lost","type":"exact"},{"name":"snpEff:START_LOST","type":"exact"}],"termid":"SO:0002012"}


id: FYPO:0001159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured intracellular pH is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular pH","synonyms":[{"name":"increased cellular pH during mitotic cell cycle","type":"related"},{"name":"increased cellular pH during vegetative growth","type":"exact"},{"name":"increased cellular pH level","type":"exact"}],"termid":"FYPO:0001159"}


id: PBO:0070345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 18","termid":"PBO:0070345"}


id: GO:0030422
data:
  {"annotated_genes":["SJAG_02817","SJAG_03356"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95663,105217],"is_not":false,"summary":null,"term":"GO:0030422"}]},"cv_name":"biological_process","definition":"A process leading to the generation of a functional small interfering RNA (siRNA). Includes the cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs) of 21-23 nucleotides. May also include amplification of the siRNA by RNA-directed RNA polymerase.","definition_xrefs":["PMID:19239886","GOC:mah","PMID:20687832","PMID:11524674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02817":null,"SJAG_03356":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"siRNA processing","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070919"],"synonyms":[{"name":"RNA interference, production of guide RNAs","type":"exact"},{"name":"RNA interference, production of siRNA","type":"exact"},{"name":"chromatin silencing by small RNA, production of guide RNAs","type":"exact"},{"name":"chromatin silencing by small RNA, production of siRNA","type":"exact"},{"name":"production of guide RNAs involved in RNA interference","type":"exact"},{"name":"production of guide RNAs involved in chromatin silencing by small RNA","type":"exact"},{"name":"production of siRNA","type":"related"},{"name":"production of siRNA involved in PTGS","type":"related"},{"name":"production of siRNA involved in RNA interference","type":"exact"},{"name":"production of siRNA involved in chromatin silencing by small RNA","type":"exact"},{"name":"production of siRNA involved in gene silencing by small RNA","type":"narrow"},{"name":"production of siRNA involved in post-transcriptional gene silencing by RNA","type":"exact"}],"termid":"GO:0030422","terms_by_termid":{"GO:0030422":null}}


id: PBO:0054760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2172","termid":"PBO:0054760"}


id: PBO:0065887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB35, member RAS oncogene family","termid":"PBO:0065887"}


id: GO:0035151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that an epithelial tube in an open tracheal system is of the correct length and diameter. Tracheal tubes undergo highly regulated tube-size increases during development, expanding up to 40 times their initial size by the end of larval life. Tube size appears to be controlled by regulation of apical membrane expansion and secretion, rather than by changes in cell number, size or shape.","definition_xrefs":["PMID:12930776","GOC:mtg_sensu","PMID:10887083","PMID:12973360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tube size","termid":"GO:0035150"},{"relation_name":"is_a","term_name":"regulation of tube architecture, open tracheal system","termid":"GO:0035152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube size, open tracheal system","synonyms":[{"name":"regulation of tracheal tube size","type":"exact"}],"termid":"GO:0035151"}


id: GO:0043139
data:
  {"annotated_genes":["SJAG_03780","SJAG_03495","SJAG_00995"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88274,108622,114249],"is_not":false,"summary":null,"term":"GO:0043139"}]},"cv_name":"molecular_function","definition":"Unwinding a DNA helix in the 5' to 3' direction, driven by ATP hydrolysis.","definition_xrefs":["EC:5.6.2.3","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase activity","termid":"GO:0003678"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_03495":null,"SJAG_03780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5'-3' DNA helicase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0043141","GO:0008722","Reactome:R-HSA-6782131"],"synonyms":[{"name":"5' to 3' DNA helicase activity","type":"exact"},{"name":"ATP-dependent 5' to 3' DNA helicase activity","type":"exact"},{"name":"ATP-dependent 5'-3' DNA helicase activity","type":"exact"},{"name":"DNA helicase IV activity","type":"narrow"}],"termid":"GO:0043139","terms_by_termid":{"GO:0043139":null}}


id: PR:O94477
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myo52 gene.","definition_xrefs":["UniProtKB:O94477","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin-52 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.10c","synonyms":[{"name":"Spom972h-myo52","type":"exact"},{"name":"myosin type V-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94477"}


id: GO:0030207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan catabolic process","termid":"GO:0006027"},{"relation_name":"is_a","term_name":"chondroitin sulfate metabolic process","termid":"GO:0030204"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"chondroitin sulfate catabolic process","secondary_identifiers":["MetaCyc:PWY-6572","MetaCyc:PWY-6573"],"synonyms":[{"name":"chondroitin sulfate breakdown","type":"exact"},{"name":"chondroitin sulfate catabolism","type":"exact"},{"name":"chondroitin sulfate degradation","type":"exact"},{"name":"chondroitin sulphate catabolic process","type":"exact"},{"name":"chondroitin sulphate catabolism","type":"exact"}],"termid":"GO:0030207"}


id: PBO:0045388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP9 antisense RNA 1","termid":"PBO:0045388"}


id: PBO:0048565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated, gamma adaptin ear containing, ARF binding protein 3","termid":"PBO:0048565"}


id: PBO:0067204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 269, pseudogene","termid":"PBO:0067204"}


id: GO:1900029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ruffle assembly.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"regulation of ruffle assembly","termid":"GO:1900027"},{"relation_name":"positively_regulates","term_name":"ruffle assembly","termid":"GO:0097178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of ruffle assembly","synonyms":[{"name":"positive regulation of membrane ruffle formation","type":"exact"},{"name":"positive regulation of membrane ruffling","type":"exact"},{"name":"up regulation of membrane ruffle formation","type":"exact"},{"name":"up regulation of membrane ruffling","type":"exact"},{"name":"up regulation of ruffle assembly","type":"related"}],"termid":"GO:1900029"}


id: PBO:0012826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-removed_during","termid":"PBO:0012826"}


id: PBO:0077026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymocyte selection associated","termid":"PBO:0077026"}


id: PBO:0026861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_centromeric_chromatin","termid":"PBO:0026861"}


id: PBO:0113513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tyrosyl-DNA phosphodiesterase I; hydrolyzes 3' and 5'-phosphotyrosyl bonds; involved in the repair of DNA lesions created by topo I and topo II, including DNA-protein cross-links; mutations in the human homolog, TDP1, result in the neurodegenerative disease, spinocerebellar ataxia with axonal neuropathy (SCAN1); yeast cells and human rhabdomyosarcoma lines that overexpress TDP1 both exhibit elevated dosage chromosomal instability (dCIN)","termid":"PBO:0113513"}


id: GO:0106248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of poly(A)-specific ribonuclease activity.","definition_xrefs":["GOC:mah","PMID:29932902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of poly(A)-specific ribonuclease activity","termid":"GO:0106246"},{"relation_name":"is_a","term_name":"positive regulation of exoribonuclease activity","termid":"GO:1901919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of poly(A)-specific ribonuclease activity","termid":"GO:0106248"}


id: GO:0043628
data:
  {"annotated_genes":["SJAG_02621","SJAG_04942","SJAG_02622","SJAG_01867","SJAG_01836"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87964,88922,114183],"is_not":false,"summary":null,"term":"GO:0043628"},{"annotations":[114157,103881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990431"},{"annotations":[103883,114160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990432"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a regulatory non-coding RNA molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"},{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01836":null,"SJAG_01867":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulatory ncRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ncRNA 3' end processing","type":"broad"},{"name":"ncRNA 3'-end processing","type":"broad"},{"name":"small regulatory ncRNA 3'-end processing","type":"narrow"}],"termid":"GO:0043628","terms_by_termid":{"GO:0043628":null,"GO:1990431":null,"GO:1990432":null}}


id: GO:0021977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the superior colliculus of the midbrain towards target cells in the ventral spinal cord.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:jid","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tectospinal tract morphogenesis","termid":"GO:0021977"}


id: PBO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor-like Chr3 (predicted)","termid":"PBO:0000211"}


id: PBO:0001085
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.2","termid":"PBO:0001085"}


id: MOD:00662
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a methylated leucine, either N-methylleucine, or leucine methyl ester.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated leucine","synonyms":[{"name":"MeLeu","type":"exact"}],"termid":"MOD:00662"}


id: PBO:0054079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1429","termid":"PBO:0054079"}


id: PBO:0091614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase class-III, possible transaminase, unknown specificity, implicated in amino acid or cofactor metabolism","termid":"PBO:0091614"}


id: PBO:0068327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 32","termid":"PBO:0068327"}


id: GO:1904113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of muscle filament sliding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:kmv","PMID:25717181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle filament sliding","termid":"GO:0032971"},{"relation_name":"is_a","term_name":"negative regulation of muscle contraction","termid":"GO:0045932"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"muscle filament sliding","termid":"GO:0030049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle filament sliding","synonyms":[{"name":"down regulation of muscle filament sliding","type":"exact"},{"name":"down-regulation of muscle filament sliding","type":"exact"},{"name":"downregulation of muscle filament sliding","type":"exact"},{"name":"inhibition of muscle filament sliding","type":"narrow"}],"termid":"GO:1904113"}


id: PBO:0065946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD1 pseudogene 2","termid":"PBO:0065946"}


id: PBO:0067983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 285","termid":"PBO:0067983"}


id: PBO:0028086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nuclear_body","termid":"PBO:0028086"}


id: PBO:0014607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase, PP4 complex subunit Pph3 (predicted)","termid":"PBO:0014607"}


id: _global:level_fluctuates_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification site occupancy is observed to vary.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"level_fluctuates_during","synonyms":[{"name":"occupancy_fluctuates_during","type":"exact"}],"termid":"_global:level_fluctuates_during"}


id: PBO:0070388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin associated tail protein 1 like","termid":"PBO:0070388"}


id: GO:0001195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Suppression of the occurrence of transcriptional errors, such as substitutions and/or insertions of nucleotides that do not correctly match the template base, during the process of transcription elongation from a RNA polymerase III promoter.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of transcriptional fidelity during transcription elongation","termid":"GO:0001192"},{"relation_name":"part_of","term_name":"transcription elongation by RNA polymerase III","termid":"GO:0006385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"maintenance of transcriptional fidelity during transcription elongation by RNA polymerase III","synonyms":[{"name":"maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase III promoter","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0001195"}


id: PBO:0086891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane protein involved in export of ammonia; ammonia is a starvation signal that promotes cell death in aging colonies; phosphorylated in mitochondria; member of the TC 9.B.33 YaaH family; homolog of Y. lipolytica Gpr1p; ATO2 has a paralog, ADY2, that arose from the whole genome duplication","termid":"PBO:0086891"}


id: PBO:0062278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 14","termid":"PBO:0062278"}


id: PBO:0052621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRR1 pseudogene 1","termid":"PBO:0052621"}


id: PR:Q9USZ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- end3 gene.","definition_xrefs":["UniProtKB:Q9USZ7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cytoskeleton-regulatory complex protein end3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.02c","synonyms":[{"name":"Spom972h-end3","type":"exact"},{"name":"endocytosis protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USZ7"}


id: PBO:0053931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1230","termid":"PBO:0053931"}


id: PBO:0083090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA binding transcriptional activator; mediates serine/threonine activation of the catabolic L-serine (L-threonine) deaminase (CHA1); Zinc-finger protein with Zn[2]-Cys[6] fungal-type binuclear cluster domain","termid":"PBO:0083090"}


id: GO:0055043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-oxovalerate + NADP+ + H2O = glutarate + NADPH + H+.","definition_xrefs":["GOC:jid","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-oxovalerate dehydrogenase activity","termid":"GO:0055043"}


id: PBO:0082931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic and mitochondrial histidine tRNA synthetase; efficient mitochondrial localization requires both a presequence and an amino-terminal sequence; mutations in human ortholog HARS2 are associated with Perrault syndrome","termid":"PBO:0082931"}


id: GO:1900309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltoheptaose metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"maltoheptaose metabolic process","termid":"GO:2001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of maltoheptaose metabolic process","synonyms":[{"name":"regulation of maltoheptaose metabolism","type":"exact"}],"termid":"GO:1900309"}


id: PBO:0043568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 5 chain","termid":"PBO:0043568"}


id: PBO:0081241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF8-ERVK3-1 readthrough (NMD candidate)","termid":"PBO:0081241"}


id: GO:0110150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of biomineralization, the formation and deposition of mineral crystals by living organisms.","definition_xrefs":["PMID:22992051"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of biomineralization (obsolete GO:0110150)","synonyms":[{"name":"negative regulation of biomineral formation","type":"narrow"},{"name":"negative regulation of biomineralisation","type":"exact"},{"name":"negative regulation of mineralisation","type":"exact"},{"name":"negative regulation of mineralization","type":"exact"}],"termid":"GO:0110150"}


id: GO:0032412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of an ion transporter.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of monoatomic ion transmembrane transporter activity","synonyms":[{"name":"regulation of ion transmembrane transporter activity","type":"broad"},{"name":"regulation of ion transporter activity","type":"exact"}],"termid":"GO:0032412"}


id: PBO:0076225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT6 homolog, histone chaperone and transcription elongation factor","termid":"PBO:0076225"}


id: PBO:0057708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1295a","termid":"PBO:0057708"}


id: FYPO:0001278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which MCM complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal MCM complex assembly","synonyms":[{"name":"normal MCM complex assembly during mitotic cell cycle","type":"related"},{"name":"normal MCM complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0001278"}


id: PR:Q10107
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mra1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA small subunit methyltransferase mra1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.07c","synonyms":[{"name":"18S rRNA (pseudouridine-N1)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mra1","type":"exact"},{"name":"multicopy suppressor of ras1-deficiency protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10107"}


id: PBO:0078976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 4-1","termid":"PBO:0078976"}


id: GO:0050665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"reactive oxygen species biosynthetic process","termid":"GO:1903409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide biosynthetic process","synonyms":[{"name":"H2O2 biosynthetic process","type":"exact"},{"name":"hydrogen peroxide anabolism","type":"exact"},{"name":"hydrogen peroxide biosynthesis","type":"exact"},{"name":"hydrogen peroxide formation","type":"exact"},{"name":"hydrogen peroxide generation","type":"exact"},{"name":"hydrogen peroxide synthesis","type":"exact"}],"termid":"GO:0050665"}


id: PBO:0003398
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Activating Protein","termid":"PBO:0003398"}


id: GO:1904862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inhibitory synapse.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"inhibitory synapse assembly","synonyms":[{"name":"inhibitory synapse formation","type":"exact"}],"termid":"GO:1904862"}


id: GO:0007611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition and processing of information and/or the storage and retrieval of this information over time.","definition_xrefs":["PMID:8938125","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"cognition","termid":"GO:0050890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"learning or memory","termid":"GO:0007611"}


id: GO:0046931
data:
  {"annotated_genes":["SJAG_01833"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051292"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a pore complex. A pore complex is a small opening in a membrane that allows the passage of liquids and/or gases.","definition_xrefs":["GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01833":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"pore complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pore biosynthesis","type":"exact"},{"name":"pore complex biogenesis","type":"related"},{"name":"pore formation","type":"exact"},{"name":"pore-forming toxin activity","type":"related"}],"termid":"GO:0046931","terms_by_termid":{"GO:0051292":null}}


id: PBO:0049810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 3","termid":"PBO:0049810"}


id: FYPO:0005834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport to the cortex of the cell tip, driven by polymerization of a microtubule to which the protein is attached, is decreased. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["GO:0099110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule to cell tip cortex during vegetative growth","termid":"FYPO:0005832"},{"relation_name":"is_a","term_name":"decreased protein transport along microtubule to cell tip during vegetative growth","termid":"FYPO:0005833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein transport along microtubule to cell tip cortex during vegetative growth","synonyms":[{"name":"decreased protein movement along microtubule to cell tip cortex during vegetative growth","type":"exact"},{"name":"decreased protein transport along microtubule to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"decreased protein transport along microtubule to cell tip cortex during mitotic cell cycle","type":"related"},{"name":"reduced protein transport along microtubule to cell tip cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0005834"}


id: GO:0034373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within an intermediate-density lipoprotein particle.","definition_xrefs":["GOC:mah","GOC:expert_pt","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich lipoprotein particle remodeling","termid":"GO:0034370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate-density lipoprotein particle remodeling","synonyms":[{"name":"IDL remodeling","type":"exact"},{"name":"IDL remodelling","type":"exact"},{"name":"intermediate-density lipoprotein particle formation","type":"related"},{"name":"intermediate-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0034373"}


id: MOD:01164
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a riboflavin phosphate (flavin mononucleotide, FMN) group through a phosphodiester bond.","definition_xrefs":["Unimod:442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin-phosphoryl","synonyms":[{"name":"FMN","type":"related"},{"name":"O3-(riboflavin phosphoryl)","type":"related"}],"termid":"MOD:01164"}


id: PBO:0054035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1366","termid":"PBO:0054035"}


id: PBO:0066867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 167","termid":"PBO:0066867"}


id: PBO:0036138
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_kinetochore_during_mitosis","termid":"PBO:0036138"}


id: _global:has_severity
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and its observed severity in a cell. Can also be used to capture expressivity, i.e. the extent to which a phenotype is expressed in an individual.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_severity","synonyms":[{"name":"has_expressivity","type":"exact"}],"termid":"_global:has_severity"}


id: PBO:0063255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDHB1 antisense RNA 1","termid":"PBO:0063255"}


id: PBO:0090221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/snRNA/rRNA pseudouridine synthase Pus7","termid":"PBO:0090221"}


id: GO:0008466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + glycogenin = UDP + glucosylglycogenin. This first reaction is a self glucosylation. Further UDP-glucose goups are added to the [1,4-alpha-D-glucosyl](n) group of glycogenin until a length of about 5-13 residues.","definition_xrefs":["EC:2.4.1.186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"glycogenin glucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-3814838","Reactome:R-HSA-3322019","Reactome:R-HSA-3322025","Reactome:R-HSA-3322003","Reactome:R-HSA-3322014","GO:0047210"],"synonyms":[{"name":"1,4alpha-glucan-protein synthase (UDP-forming) activity","type":"exact"},{"name":"UDP-alpha-D-glucose:glycogenin alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:glycogenin glucosyltransferase activity","type":"related"},{"name":"alpha-1,4-glucan-protein synthase (UDP-forming) activity","type":"exact"},{"name":"glycogenin activity","type":"related"},{"name":"priming glucosyltransferase activity","type":"related"}],"termid":"GO:0008466"}


id: PBO:0003700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Ngg1","termid":"PBO:0003700"}


id: GO:0001866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a NK T cell population by cell division.","definition_xrefs":["GOC:add","PMID:10704459","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"},{"relation_name":"is_a","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell proliferation","synonyms":[{"name":"NK T lymphocyte proliferation","type":"exact"},{"name":"NK T-cell proliferation","type":"exact"},{"name":"NK T-lymphocyte proliferation","type":"exact"},{"name":"NKT cell proliferation","type":"exact"},{"name":"NT cell proliferation","type":"exact"},{"name":"natural T cell proliferation","type":"exact"},{"name":"natural killer T cell proliferation","type":"exact"}],"termid":"GO:0001866"}


id: GO:1990297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which amino acids are taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures.","definition_xrefs":["GOC:hjd","PMID:1526373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal amino acid absorption","termid":"GO:1990297"}


id: PBO:0072942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 21B","termid":"PBO:0072942"}


id: GO:1905242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',5-triiodo-L-thyronine stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:21382270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 3,3',5-triiodo-L-thyronine","synonyms":[{"name":"response to Liothyronin","type":"exact"},{"name":"response to Liothyronine","type":"exact"},{"name":"response to Liothyroninum","type":"exact"}],"termid":"GO:1905242"}


id: GO:0047354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-choline + sphingosine = CMP + H+ + sphingosyl-phosphocholine.","definition_xrefs":["EC:2.7.8.10","RHEA:21224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016780","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sphingosine cholinephosphotransferase activity","secondary_identifiers":["MetaCyc:2.7.8.10-RXN","KEGG_REACTION:R01929"],"synonyms":[{"name":"CDP-choline-sphingosine cholinephosphotransferase activity","type":"related"},{"name":"CDP-choline:sphingosine cholinephosphotransferase activity","type":"related"},{"name":"cytidine diphosphocholine-sphingosine cholinephosphotransferase activity","type":"related"},{"name":"phosphorylcholine-sphingosine transferase activity","type":"related"},{"name":"sphingosine choline phosphotransferase activity","type":"exact"}],"termid":"GO:0047354"}


id: MOD:01099
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to succinyl beta-aspartyl anhydride.","definition_xrefs":["DeltaMass:244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"succinylated residue","termid":"MOD:01029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"succinyl beta-aspartyl anhydride","synonyms":[{"name":"succinyl aspartamyl","type":"exact"}],"termid":"MOD:01099"}


id: GO:0031659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity contributing to the G1/S transition of the cell cycle.","definition_xrefs":["GOC:mah","GOC:pr","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle (obsolete GO:0031659)","synonyms":[{"name":"G1/S-specific activation of cyclin-dependent protein kinase activity","type":"narrow"},{"name":"G1/S-specific positive regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G1/S-specific stimulation of cyclin-dependent protein kinase activity","type":"narrow"},{"name":"G1/S-specific up regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G1/S-specific up-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G1/S-specific upregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of cyclin-dependent protein kinase activity during G1/S","type":"related"},{"name":"positive regulation of cyclin-dependent protein kinase activity involved in G1/S","type":"broad"}],"termid":"GO:0031659"}


id: PBO:0042245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 7","termid":"PBO:0042245"}


id: GO:0042939
data:
  {"annotated_genes":["SJAG_01344","SJAG_05213","SJAG_01983","SJAG_03577","SJAG_03497","SJAG_01660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59003],"is_not":false,"summary":null,"term":"GO:0042939"},{"annotations":[91633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[109240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[114267,92179,93164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[91634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034775"},{"annotations":[99113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"}]},"cv_name":"biological_process","definition":"The directed movement of a tripeptide, a compound containing three amino acids linked together by peptide bonds, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"tripeptide transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0042939","terms_by_termid":{"GO:0034775":null,"GO:0042939":null,"GO:0071996":null,"GO:0098709":null,"GO:0140207":null,"GO:0160007":null}}


id: GO:0045243
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Cytosolic complex that possesses isocitrate dehydrogenase (NAD+) activity.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic isocitrate dehydrogenase complex (NAD+) (obsolete GO:0045243)","synonyms":[{"name":"isocitrate dehydrogenase complex (NAD+)","type":"broad"}],"termid":"GO:0045243"}


id: PBO:0048973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 2 pseudogene 2","termid":"PBO:0048973"}


id: GO:0018885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbon tetrachloride, a toxic, carcinogenic compound which is used as a general solvent in industrial degreasing operations. It is also used as grain fumigant and a chemical intermediate in the production of refrigerants.","definition_xrefs":["UM-BBD_pathwayID:ctc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbon tetrachloride metabolic process","synonyms":[{"name":"carbon tetrachloride metabolism","type":"exact"}],"termid":"GO:0018885"}


id: PBO:0087735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Slx5-Slx8 SUMO-targeted Ub ligase (STUbL) complex; role in Ub-mediated degradation of histone variant Cse4p preventing mislocalization to euchromatin; role in proteolysis of spindle positioning protein Kar9p, and DNA repair proteins Rad52p and Rad57p; forms SUMO-dependent nuclear foci, including DNA repair centers; contains a RING domain and two SIM motifs; associates with the centromere; required for maintenance of genome integrity like human ortholog RNF4","termid":"PBO:0087735"}


id: PBO:0068640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 21, pseudogene","termid":"PBO:0068640"}


id: MOD:00092
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-asparagine amide.","definition_xrefs":["ChEBI:145898","RESID:AA0083","PubMed:279902","PubMed:2753132","PubMed:3415690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparagine amide","synonyms":[{"name":"(2S)-2-aminobutanediamide","type":"exact"},{"name":"AsnN","type":"exact"},{"name":"L-asparagine amide","type":"exact"},{"name":"MOD_RES Asparagine amide","type":"exact"},{"name":"amidated L-asparagine","type":"exact"},{"name":"asparaginamide","type":"exact"}],"termid":"MOD:00092"}


id: PR:Q9C0Z1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Z1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein PB24D3.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.01","synonyms":[{"name":"Spom972h-toe3","type":"exact"}],"termid":"PR:Q9C0Z1"}


id: PBO:0058321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4694","termid":"PBO:0058321"}


id: PBO:0005774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoamyl acetate hydrolytic enzyme Iah1 (predicted)","termid":"PBO:0005774"}


id: PBO:0066590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member D","termid":"PBO:0066590"}


id: PBO:0111907
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIPSY domain","termid":"PBO:0111907"}


id: GO:0030518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a steroid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone receptor signaling pathway","termid":"GO:0043401"},{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nuclear receptor-mediated steroid hormone signaling pathway","synonyms":[{"name":"intracellular steroid hormone receptor signaling pathway","type":"exact"},{"name":"steroid hormone receptor signaling pathway","type":"broad"},{"name":"steroid hormone receptor signalling pathway","type":"broad"}],"termid":"GO:0030518"}


id: GO:0018278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deamination of N-terminal peptidyl-threonine to form peptidyl-2-oxobutanoic acid.","definition_xrefs":["RESID:AA0129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination, from amino carbon","termid":"GO:0018058"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-threonine deamination","termid":"GO:0018278"}


id: PBO:0083930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fungal-specific protein of unknown function; induced in respiratory-deficient cells; YAR068W has a paralog, YHR214W-A, that arose from a segmental duplication","termid":"PBO:0083930"}


id: PBO:0002725
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wiskott-Aldrich syndrome","termid":"PBO:0002725"}


id: GO:0009123
data:
  {"annotated_genes":["SJAG_01859","SJAG_02364","SJAG_04487","SJAG_04849","SJAG_03708","SJAG_03355","SJAG_04713","SJAG_00197","SJAG_04681","SJAG_04627","SJAG_04845","SJAG_04970","SJAG_04709","SJAG_00964","SJAG_00044","SJAG_04634","SJAG_04882","SJAG_01661","SJAG_00533","SJAG_02850","SJAG_00444","SJAG_03771","SJAG_04354","SJAG_02038","SJAG_01974","SJAG_03811","SJAG_01937","SJAG_01081","SJAG_06634","SJAG_04123","SJAG_03164","SJAG_01055","SJAG_01814","SJAG_01298","SJAG_00694","SJAG_01070","SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85007,99527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[99528,106344,110597,113434,115039,93916,95669,106455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[89513,112816,108011,85572,94605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[94240,97913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046033"},{"annotations":[112933,89636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[67024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[112197,113259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009159"},{"annotations":[85498,104474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[95089,104475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[111814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[110208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046444"},{"annotations":[59018,104368,97293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[63698,98341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046037"},{"annotations":[89856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[115040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[85010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046040"},{"annotations":[97914,89858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[106018,111050,93824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009156"},{"annotations":[111006,88069,83599,89059,84586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[89860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic process","termid":"GO:0006753"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_01055":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_01937":null,"SJAG_01974":null,"SJAG_02038":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_03355":null,"SJAG_03708":null,"SJAG_03771":null,"SJAG_03811":null,"SJAG_04123":null,"SJAG_04354":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_04845":null,"SJAG_04849":null,"SJAG_04882":null,"SJAG_04970":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009123","terms_by_termid":{"GO:0006177":null,"GO:0006188":null,"GO:0006189":null,"GO:0006226":null,"GO:0006231":null,"GO:0009156":null,"GO:0009159":null,"GO:0009224":null,"GO:0009398":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null,"GO:0046033":null,"GO:0046037":null,"GO:0046040":null,"GO:0046444":null}}


id: PBO:0108978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 3","termid":"PBO:0108978"}


id: GO:0050978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive an electrical stimulus relating to a magnetic field, convert it to a molecular signal, and recognize and characterize the signal. Movement in a magnetic field results in an induced electric field, which can be perceived by organisms such as elasmobranch fish.","definition_xrefs":["PMID:15886990","Wikipedia:Magnetoception","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of electrical stimulus","termid":"GO:0050952"},{"relation_name":"is_a","term_name":"magnetoreception","termid":"GO:0050958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"magnetoreception by sensory perception of electrical stimulus","synonyms":[{"name":"magnetoreception by electrical stimulus","type":"exact"},{"name":"magnetoreception through electrical stimulus","type":"exact"},{"name":"magnetoreception, sensory perception of electrical stimulus","type":"exact"},{"name":"magnetoreception, using electrical stimulus","type":"exact"}],"termid":"GO:0050978"}


id: PBO:0064158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IIC","termid":"PBO:0064158"}


id: GO:1902206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-2-mediated signaling pathway.","definition_xrefs":["PMID:11909529","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-2-mediated signaling pathway","termid":"GO:1902205"},{"relation_name":"negatively_regulates","term_name":"interleukin-2-mediated signaling pathway","termid":"GO:0038110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-2-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-2-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-2-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-2-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:1902206"}


id: GO:0006297
data:
  {"annotated_genes":["SJAG_02908","SJAG_00814","SJAG_02818","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101016,103446,105209,109995],"is_not":false,"summary":null,"term":"GO:0006297"}]},"cv_name":"biological_process","definition":"Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00814":null,"SJAG_02527":null,"SJAG_02818":null,"SJAG_02908":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"nucleotide-excision repair, DNA gap filling","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006297","terms_by_termid":{"GO:0006297":null}}


id: GO:0036358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a D-alanyl ester of lipoteichoic acid by transfer of D-Ala onto a membrane-associated lipoteichoic acid (LTA).","definition_xrefs":["GOC:crds","PMID:22750871","PMID:8682792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid D-alanylation","termid":"GO:0070400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0044085","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lipoteichoic acid D-alanylation","synonyms":[{"name":"D-alanyl LTA formation","type":"exact"},{"name":"D-alanyl lipoteichoic acid formation","type":"exact"},{"name":"LTA D-alanylation","type":"exact"}],"termid":"GO:0036358"}


id: GO:0062002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or rate of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity.","definition_xrefs":["PMID:23407971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","termid":"GO:0062002"}


id: PBO:0086336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protoporphyrinogen oxidase; a mitochondrial enzyme that catalyzes the seventh step in the heme biosynthetic pathway, converting protoporphyrinogen IX to protoporphyrin IX; inhibited by diphenyl ether-type herbicides","termid":"PBO:0086336"}


id: MOD:00525
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:157","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex2HexNAc2Pent1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(2)HexNAc(2)Pent(1)","type":"related"},{"name":"Hex2HexNAc2Pent1","type":"related"}],"termid":"MOD:00525"}


id: PBO:0003243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S16 (predicted)","termid":"PBO:0003243"}


id: PBO:0081549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 469","termid":"PBO:0081549"}


id: PBO:0061191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin U receptor 1","termid":"PBO:0061191"}


id: PBO:0053519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 511","termid":"PBO:0053519"}


id: PBO:0080560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 11","termid":"PBO:0080560"}


id: GO:0060496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell and contributes to the development of the lung.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"},{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal-epithelial cell signaling involved in lung development","synonyms":[{"name":"mesenchymal-epithelial cell signalling involved in lung development","type":"exact"}],"termid":"GO:0060496"}


id: PBO:0049377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIC subunit 1","termid":"PBO:0049377"}


id: FYPO:0000473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic recombination","termid":"FYPO:0000481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased mitotic recombination","synonyms":[{"name":"increased mitotic recombination during mitotic cell cycle","type":"related"},{"name":"increased mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: increased","type":"related"}],"termid":"FYPO:0000473"}


id: PBO:0045260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DND microRNA-mediated repression inhibitor 1","termid":"PBO:0045260"}


id: PBO:0048075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 26","termid":"PBO:0048075"}


id: PBO:0000615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase, URM1 activating enzyme (predicted)","termid":"PBO:0000615"}


id: GO:0033010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly specialized cell-cell junction found in vertebrates, which forms between a neuron and a glial cell, and has structural similarity to Drosophila septate junctions. It flanks the node of Ranvier in myelinated nerve and electrically isolates the myelinated from unmyelinated nerve segments and physically separates the voltage-gated sodium channels at the node from the cluster of potassium channels underneath the myelin sheath.","definition_xrefs":["PMID:11395001","PMID:14630217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"paranodal junction","synonyms":[{"name":"axoglial septate junction","type":"exact"},{"name":"paranodal axoglial junction","type":"exact"},{"name":"paranodal septate junction","type":"exact"}],"termid":"GO:0033010"}


id: PBO:0087017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide reductase inhibitor; intrinsically disordered protein that binds to and inhibits Rnr2p; involved in the Mec1p-mediated checkpoint pathway; transcription is induced by genotoxic stress and by activation of the Rad53p pathway; protein abundance increases in response to DNA replication stress","termid":"PBO:0087017"}


id: GO:0007363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation of genes encoding transcription factors at the anterior and posterior ends of an insect embryo by a combination of maternal regulatory signals and interactions among themselves; exemplified by the activation of expression of the Drosophila tailless and huckebein genes.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of terminal gap gene transcription (obsolete GO:0007363)","synonyms":[{"name":"activation of terminal gap gene","type":"broad"},{"name":"activation of terminal gap gene transcription","type":"narrow"},{"name":"stimulation of terminal gap gene transcription","type":"narrow"},{"name":"up regulation of terminal gap gene transcription","type":"exact"},{"name":"up-regulation of terminal gap gene transcription","type":"exact"},{"name":"upregulation of terminal gap gene transcription","type":"exact"}],"termid":"GO:0007363"}


id: GO:0045097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A type of intermediate filament.","definition_xrefs":["ISBN:0716731363","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete basic/neutral keratin (obsolete GO:0045097)","synonyms":[{"name":"basic/neutral keratin","type":"exact"},{"name":"type II intermediate filament","type":"exact"}],"termid":"GO:0045097"}


id: GO:0005928
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cell-substrate adherens junction found in the apical region of a cell, such as those found in cuticle-secreting epithelia, which connect the apical membrane to the cuticle.","definition_xrefs":["PMID:11700298","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete apical hemi-adherens junction (obsolete GO:0005928)","synonyms":[{"name":"apical cell-substrate adherens junction","type":"exact"},{"name":"apical dense plaque","type":"exact"}],"termid":"GO:0005928"}


id: PBO:0082401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the capping protein heterodimer (Cap1p and Cap2p); capping protein (CP) binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches; protein increases in abundance and relocalizes from bud neck to plasma membrane upon DNA replication stress","termid":"PBO:0082401"}


id: SO:0002334
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon with the DNA sequence TAA.","direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon","termid":"SO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ochre_stop_codon","synonyms":[{"name":"Ochre stop codon","type":"exact"}],"termid":"SO:0002334"}


id: PR:Q10173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein Nuf2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21650:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein nuf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.04c","secondary_identifiers":["UniProtKB:Q10173"],"synonyms":[{"name":"NMS complex subunit nuf2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC27F1.04c","type":"related"},{"name":"Spom972h-NUF2","type":"exact"}],"termid":"PR:Q10173"}


id: GO:0047217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: Catalysis of the reaction: sucrose + 1,6-alpha-D-glucosyl(n) = 1,6-alpha-D-glucosyl(n+1) + fructose.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose-1,6-alpha-glucan 3(6)-alpha-glucosyltransferase activity (obsolete GO:0047217)","termid":"GO:0047217"}


id: PBO:0072450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 14","termid":"PBO:0072450"}


id: PBO:0069542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 812, pseudogene","termid":"PBO:0069542"}


id: PBO:0091891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA translocase/ubiquitin protein ligase E3, human ERCC4 ortholog Rhp16/Rad16","termid":"PBO:0091891"}


id: PBO:0079817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"up-regulated in colorectal cancer liver metastasis","termid":"PBO:0079817"}


id: PBO:0072039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 9","termid":"PBO:0072039"}


id: PBO:0064232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCH1 antisense RNA 2","termid":"PBO:0064232"}


id: PBO:0063705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidoglycan recognition protein 4","termid":"PBO:0063705"}


id: PBO:0001251
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininemia","termid":"PBO:0001251"}


id: PBO:0051373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-34 (pseudogene)","termid":"PBO:0051373"}


id: GO:0043034
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix.","definition_xrefs":["ISBN:0198506732","PMID:6405378","GOC:mtg_muscle","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"costamere","secondary_identifiers":["Wikipedia:Costamere"],"termid":"GO:0043034"}


id: GO:0034863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethyl-1-pentanol = 2,4,4-trimethylpentanal + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethyl-1-pentanol dehydrogenase activity (obsolete GO:0034863)","termid":"GO:0034863"}


id: PBO:0072011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 13","termid":"PBO:0072011"}


id: PBO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF726 family protein","termid":"PBO:0001309"}


id: PBO:0016521
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SST2","termid":"PBO:0016521"}


id: PBO:0053198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphatic endothelial transcriptional regulator lncRNA 1","termid":"PBO:0053198"}


id: PR:P87121
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00575","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.05c","secondary_identifiers":["UniProtKB:P87121"],"synonyms":[{"name":"Spom972h-TAF2","type":"exact"},{"name":"TBP-associated factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87121"}


id: MOD:00898
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(sn-1-2-oleoyl-3-palmitoyl-glycerol)cysteine.","definition_xrefs":["RESID:AA0107#var","Unimod:377","PubMed:4575979","PubMed:10896212","PubMed:9056182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-diacylglycerol-L-cysteine","termid":"MOD:00116"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(sn-1-2-oleoyl-3-palmitoyl-glycerol)cysteine","synonyms":[{"name":"Diacylglycerol","type":"related"},{"name":"diacylglycerol","type":"related"}],"termid":"MOD:00898"}


id: FYPO:0005902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament-based movement is decreased. Actin filament-based movement is the movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["PomBase:mah","GO:0030048","PMID:19570908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament-based movement","termid":"FYPO:0005900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of actin filament-based movement","synonyms":[{"name":"decreased rate of actin filament-based movement during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin filament-based movement during vegetative growth","type":"exact"},{"name":"reduced rate of actin filament-based movement","type":"exact"}],"termid":"FYPO:0005902"}


id: PBO:0080616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 53","termid":"PBO:0080616"}


id: GO:0042053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dopamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine metabolic process","termid":"GO:0042069"},{"relation_name":"regulates","term_name":"dopamine metabolic process","termid":"GO:0042417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dopamine metabolic process","synonyms":[{"name":"regulation of dopamine metabolism","type":"exact"}],"termid":"GO:0042053"}


id: SO:0001669
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The minimal portion of the promoter required to properly initiate transcription in RNA polymerase II transcribed genes.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_II_core_promoter","synonyms":[{"name":"RNApol II core promoter","type":"exact"}],"termid":"SO:0001669"}


id: PBO:0060630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 5 like","termid":"PBO:0060630"}


id: GO:0050218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + propanoate + CoA = AMP + diphosphate + propanoyl-CoA.","definition_xrefs":["EC:6.2.1.17","MetaCyc:PROPIONATE--COA-LIGASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid-CoA ligase activity","termid":"GO:0031955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"propionate-CoA ligase activity","secondary_identifiers":["RHEA:20373"],"synonyms":[{"name":"propanoate:CoA ligase (AMP-forming)","type":"related"},{"name":"propionyl-CoA synthetase activity","type":"related"}],"termid":"GO:0050218"}


id: PBO:0067042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 60, pseudogene","termid":"PBO:0067042"}


id: PATO:0000967
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a sinuate margin and rippled surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undulate","secondary_identifiers":["PATO:0001939","PATO:0001610"],"synonyms":[{"name":"rippled","type":"related"},{"name":"sinuate","type":"related"},{"name":"undulated","type":"exact"},{"name":"undulating","type":"exact"},{"name":"waved","type":"exact"},{"name":"wavy","type":"exact"}],"termid":"PATO:0000967"}


id: PATO:0002196
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality which inheres in a molecular entity by virtue of the molecular entity possessing more electrons overall than protons, thus having an overall negative charge.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electric charge","termid":"PATO:0002193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative charge","termid":"PATO:0002196"}


id: GO:0035997
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a microvillus of a rhabdomere.","definition_xrefs":["GOC:sart","PMID:14744998","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvillus membrane","termid":"GO:0031528"},{"relation_name":"part_of","term_name":"rhabdomere membrane","termid":"GO:0033583"},{"relation_name":"part_of","term_name":"rhabdomere microvillus","termid":"GO:0035996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"rhabdomere microvillus membrane","termid":"GO:0035997"}


id: PBO:0059322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 7","termid":"PBO:0059322"}


id: PBO:0060017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 5","termid":"PBO:0060017"}


id: PBO:0111791
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APSES domain","termid":"PBO:0111791"}


id: GO:0047042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione. The reaction is B-specific (i.e. the pro-S hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD(P)+.","definition_xrefs":["EC:1.1.1.50","MetaCyc:1.1.1.50-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"androsterone dehydrogenase activity","termid":"GO:0047023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"androsterone dehydrogenase (B-specific) activity","secondary_identifiers":["Wikipedia:3alpha-hydroxysteroid_dehydrogenase_(B-specific)","MetaCyc:1.1.1.209-RXN"],"synonyms":[{"name":"3-alpha-HSD activity","type":"related"},{"name":"3-alpha-hydroxysteroid dehydrogenase (B-specific) activity","type":"broad"},{"name":"3alpha-HSD","type":"related"},{"name":"3alpha-hydroxysteroid dehydrogenase (B-specific)","type":"broad"},{"name":"3alpha-hydroxysteroid oxidoreductase activity","type":"broad"},{"name":"3alpha-hydroxysteroid:NAD(P)+ oxidoreductase (B-specific)","type":"broad"},{"name":"hydroxyprostaglandin dehydrogenase activity","type":"related"},{"name":"sterognost 3alpha","type":"related"}],"termid":"GO:0047042"}


id: GO:0034095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the extent to which the association between sister chromatids of a replicated chromosome is maintained during a meiotic cell cycle.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of sister chromatid cohesion","termid":"GO:0034092"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034094"},{"relation_name":"negatively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion","termid":"GO:0034090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034095"}


id: PBO:0034025
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_approver_email","termid":"PBO:0034025"}


id: PBO:0083479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL085W/EXO70 and YJL087C/TRL1","termid":"PBO:0083479"}


id: PBO:0053400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 330","termid":"PBO:0053400"}


id: PBO:0027872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_methylated_histone_binding","termid":"PBO:0027872"}


id: PBO:0055737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leiomodin 3","termid":"PBO:0055737"}


id: FYPO:0002483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, has an abnormally low volume, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"inviable tapered vegetative cell","termid":"FYPO:0002111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"inviable small tapered vegetative cell","synonyms":[{"name":"inviable small bottle-shaped vegetative cell","type":"exact"},{"name":"inviable small bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable small bottle/skittle vegetative cell","type":"exact"},{"name":"inviable small skittle-shaped vegetative cell","type":"exact"},{"name":"inviable small tapered cell during vegetative growth","type":"exact"},{"name":"lethal; small tapered vegetative cell","type":"exact"}],"termid":"FYPO:0002483"}


id: PBO:0056702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meis homeobox 3","termid":"PBO:0056702"}


id: GO:0061475
data:
  {"annotated_genes":["SJAG_00443"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100754],"is_not":false,"summary":null,"term":"GO:0061475"}]},"cv_name":"biological_process","definition":"The process of coupling valine to valyl-tRNA in the cytosol, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valyl-tRNA aminoacylation","termid":"GO:0006438"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00443":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"cytosolic valyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061475","terms_by_termid":{"GO:0061475":null}}


id: GO:0047951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-acylglutathione + H2O = a carboxylate + glutathione + H+.","definition_xrefs":["EC:3.1.2.7","RHEA:22708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"glutathione thiolesterase activity","secondary_identifiers":["KEGG_REACTION:R00547","MetaCyc:GLUTATHIONE-THIOESTERASE-RXN"],"synonyms":[{"name":"S-acylglutathione hydrolase activity","type":"related"},{"name":"citryl-glutathione thioesterhydrolase activity","type":"related"},{"name":"glutathione thioesterase activity","type":"exact"}],"termid":"GO:0047951"}


id: PBO:0002729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-HIT","termid":"PBO:0002729"}


id: GO:0009412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heavy metal stimulus. Heavy metals are those metals that can form a coordination bond with a protein; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete response to heavy metal (obsolete GO:0009412)","synonyms":[{"name":"response to heavy metal","type":"exact"}],"termid":"GO:0009412"}


id: PBO:0076794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane epididymal protein 1","termid":"PBO:0076794"}


id: PBO:0028793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_centromeric_outer_repeat_transcript_level","termid":"PBO:0028793"}


id: PBO:0030106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_histidine_level","termid":"PBO:0030106"}


id: PBO:0091422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase","termid":"PBO:0091422"}


id: PBO:0062219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AO member 1 pseudogene","termid":"PBO:0062219"}


id: PBO:0073564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Src homology 2 domain containing transforming protein D","termid":"PBO:0073564"}


id: PBO:0035823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_stress_responsive_gene_mRNA_during_vegetative_growth","termid":"PBO:0035823"}


id: GO:0042185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of m-xylene, 1,3-dimethylbenzene, a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"m-xylene metabolic process","termid":"GO:0018949"},{"relation_name":"is_a","term_name":"xylene catabolic process","termid":"GO:0042184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"m-xylene catabolic process","secondary_identifiers":["MetaCyc:PWY-142"],"synonyms":[{"name":"m-xylene breakdown","type":"exact"},{"name":"m-xylene catabolism","type":"exact"},{"name":"m-xylene degradation","type":"exact"},{"name":"meta-xylene catabolic process","type":"exact"},{"name":"meta-xylene catabolism","type":"exact"}],"termid":"GO:0042185"}


id: PBO:0071705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 3","termid":"PBO:0071705"}


id: PR:O74173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor 1-beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11595:SF7","PRO:DNx","OMA:SCHPO04800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.04","secondary_identifiers":["UniProtKB:O74173"],"synonyms":[{"name":"EF-1-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EEF1B2","type":"exact"}],"termid":"PR:O74173"}


id: PBO:0058784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7153","termid":"PBO:0058784"}


id: FYPO:0006669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one cell mates with two partners, leading to the fusion of three cells. The resulting zygote can then undergo sporulation to form an ascus containing more than four spores.","definition_xrefs":["PomBase:mah","PMID:30089908"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal sporulation resulting in formation of ascus with more than four spores","termid":"FYPO:0003263"},{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000301","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mating between three cells","synonyms":[{"name":"abnormal conjugation between three cells","type":"exact"},{"name":"abnormal mating among three cells","type":"exact"}],"termid":"FYPO:0006669"}


id: PBO:0050937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 7","termid":"PBO:0050937"}


id: PBO:0090358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane hexose transmembrane transporter Ght7","termid":"PBO:0090358"}


id: GO:0046939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing one or more phosphate groups into a nucleotide to produce a phosphorylated nucleoside.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide phosphorylation (obsolete GO:0046939)","termid":"GO:0046939"}


id: PBO:0067233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 304, pseudogene","termid":"PBO:0067233"}


id: GO:0000713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During meiosis, the formation of a stable duplex DNA that contains one strand from each of the two recombining DNA molecules.","definition_xrefs":["GOC:elh","PMID:9334324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006310","GO:0007049","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"meiotic heteroduplex formation","termid":"GO:0000713"}


id: GO:0035514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from one or more nucleosides within a DNA molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA demethylase activity","termid":"GO:0035514"}


id: PBO:0083601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083601"}


id: PBO:0065962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD50 double strand break repair protein","termid":"PBO:0065962"}


id: GO:1990571
data:
  {"annotated_genes":["SJAG_03540","SJAG_04076","SJAG_02814","SJAG_01805","SJAG_00794","SJAG_01613","SJAG_02624","SJAG_02761","SJAG_03683"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89899,91416,95322,96484,98542,105240,112015,114211,114728],"is_not":false,"summary":null,"term":"GO:1990571"}]},"cv_name":"biological_process","definition":"The process by which centromeres/kinetochores attach to and migrate along microtubules to become localized to clusters at the spindle pole body during a meiotic prometaphase I.","definition_xrefs":["PMID:9009280","PMID:10366596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"is_a","term_name":"centromere clustering","termid":"GO:0098653"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0051179","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"meiotic centromere clustering","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere clustering during meiosis","type":"exact"},{"name":"homologous chromosome movement towards spindle pole in meiosis I prometaphase","type":"exact"}],"termid":"GO:1990571","terms_by_termid":{"GO:1990571":null}}


id: PBO:0062483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily A member 2 pseudogene","termid":"PBO:0062483"}


id: PBO:0046989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 87 member A","termid":"PBO:0046989"}


id: PBO:0070413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A4","termid":"PBO:0070413"}


id: PBO:0080032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 18","termid":"PBO:0080032"}


id: PBO:0072718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoid X receptor alpha","termid":"PBO:0072718"}


id: FYPO:0007453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in the Arp2/3 protein complex is lower than normal.","definition_xrefs":["PomBase:mah","PMID:10588653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex composition","termid":"FYPO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level in Arp2/3 complex","synonyms":[{"name":"decreased protein level in Arp2/3 complex during mitotic cell cycle","type":"related"},{"name":"decreased protein level in Arp2/3 complex during vegetative growth","type":"exact"},{"name":"decreased protein level in Arp2/3 protein complex","type":"exact"},{"name":"reduced protein level in Arp2/3 complex","type":"exact"}],"termid":"FYPO:0007453"}


id: GO:0042555
data:
  {"annotated_genes":["SJAG_01354","SJAG_04210","SJAG_02348","SJAG_01762","SJAG_00884","SJAG_00857"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88055,102500,103335,106311,111192,111360],"is_not":false,"summary":null,"term":"GO:0042555"}]},"cv_name":"cellular_component","definition":"A hexameric protein complex required for the initiation and regulation of DNA replication.","definition_xrefs":["GOC:jl","PMID:11282021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_02348":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MCM complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mini-chromosome maintenance complex","type":"exact"}],"termid":"GO:0042555","terms_by_termid":{"GO:0042555":null}}


id: PBO:0057347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 542","termid":"PBO:0057347"}


id: GO:0045261
data:
  {"annotated_genes":["SJAG_03114","SJAG_00438","SJAG_02598","SJAG_02564","SJAG_00915"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88944,99134,101086,104882],"is_not":false,"summary":null,"term":"GO:0045261"},{"annotations":[85251],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045267"}]},"cv_name":"cellular_component","definition":"The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled.","definition_xrefs":["PMID:10838056","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex, catalytic domain","termid":"GO:0033178"},{"relation_name":"part_of","term_name":"proton-transporting ATP synthase complex","termid":"GO:0045259"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00438":null,"SJAG_00915":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting ATP synthase complex, catalytic core F(1)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen-transporting ATP synthase, F1 sector","type":"exact"}],"termid":"GO:0045261","terms_by_termid":{"GO:0045261":null,"GO:0045267":null}}


id: GO:1901735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (R)-mevalonic acid.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00058","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(R)-mevalonic acid metabolic process","synonyms":[{"name":"(R) mevalonate metabolism","type":"exact"},{"name":"(R)-mevalonic acid metabolism","type":"exact"}],"termid":"GO:1901735"}


id: GO:0004479
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87106],"is_not":false,"summary":null,"term":"GO:0004479"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA + H2O = tetrahydrofolate + N-formylmethionyl-tRNA.","definition_xrefs":["EC:2.1.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0140101","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"methionyl-tRNA formyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:24380","Reactome:R-HSA-5389841","GO:0070128","GO:0001718","MetaCyc:METHIONYL-TRNA-FORMYLTRANSFERASE-RXN"],"synonyms":[{"name":"10-formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase activity","type":"related"},{"name":"N(10)-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"N-terminal peptidyl-methionine N-formylation","type":"related"},{"name":"N10-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"conversion of met-tRNAf to fmet-tRNA","type":"related"},{"name":"conversion of mitochondrial met-tRNAf to fmet-tRNA","type":"related"},{"name":"formylmethionyl-transfer ribonucleic synthetase activity","type":"related"},{"name":"methionyl ribonucleic formyltransferase activity","type":"related"},{"name":"methionyl-tRNA Met formyltransferase activity","type":"related"},{"name":"methionyl-tRNA transformylase activity","type":"related"},{"name":"methionyl-transfer RNA transformylase activity","type":"related"},{"name":"methionyl-transfer ribonucleate methyltransferase activity","type":"related"},{"name":"methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"mitochondrial N-terminal peptidyl-methionine N-formylation","type":"related"}],"termid":"GO:0004479","terms_by_termid":{"GO:0004479":null}}


id: PBO:0076152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGCT antisense RNA 1","termid":"PBO:0076152"}


id: FYPO:0003444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which medial cortical nodes move in random directions such that they do not undergo an overall movement towards the cell center. During contractile ring assembly, medial cortical nodes normally move towards the cell center, and condense into a ring.","definition_xrefs":["PMID:24798735","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000032","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal medial cortical node condensation","synonyms":[{"name":"abnormal medial cortical node condensation during mitotic cell cycle","type":"related"},{"name":"abnormal medial cortical node condensation during vegetative growth","type":"exact"},{"name":"abnormal medial cortical node migration","type":"exact"}],"termid":"FYPO:0003444"}


id: PBO:0072157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 34","termid":"PBO:0072157"}


id: PBO:0044801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 4B","termid":"PBO:0044801"}


id: PBO:0063368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 7","termid":"PBO:0063368"}


id: SO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is engineered and foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"engineered_gene","termid":"SO:0000280"},{"relation_name":"is_a","term_name":"foreign_gene","termid":"SO:0000285"},{"relation_name":"is_a","term_name":"engineered_foreign_region","termid":"SO:0000805"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_gene","synonyms":[{"name":"engineered foreign gene","type":"exact"}],"termid":"SO:0000281"}


id: PBO:0046197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A2","termid":"PBO:0046197"}


id: FYPO:0001963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of papulacandin B than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to papulacandin B","synonyms":[{"name":"resistance to papulacandin B during mitotic cell cycle","type":"related"},{"name":"resistance to papulacandin B during vegetative growth","type":"exact"},{"name":"resistant to papulacandin B","type":"exact"}],"termid":"FYPO:0001963"}


id: PBO:0078989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (anticodon TTA) 2-1","termid":"PBO:0078989"}


id: PBO:0048915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member J","termid":"PBO:0048915"}


id: MOD:00083
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6,N6,N6-trimethyl-L-lysine.","definition_xrefs":["PubMed:6778808","PubMed:12590383","PubMed:3145979","PubMed:4304194","PubMed:8453381","PubMed:7093227","ChEBI:17311","RESID:AA0074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated lysine","termid":"MOD:00663"},{"relation_name":"is_a","term_name":"trimethylated protonated-residue","termid":"MOD:00711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N6,N6,N6-trimethyl-L-lysine","synonyms":[{"name":"(5S)-5-amino-5-carboxy-N,N,N-trimethylpentan-1-aminium","type":"exact"},{"name":"2-amino-6-(trimethylammonio)hexanoic acid","type":"exact"},{"name":"5-azanyl-5-carboxy-N,N,N-trimethylpentanazanium","type":"exact"},{"name":"MOD_RES N6,N6,N6-trimethyllysine","type":"exact"},{"name":"N(zeta)-trimethyllysine","type":"exact"},{"name":"N-trimethylation (of lysine)","type":"exact"},{"name":"N6,N6,N6-trimethyl-L-lysine","type":"exact"},{"name":"N6,N6,N6-trimethylated L-lysine","type":"exact"},{"name":"N6,N6,N6-trimethyllysin-N6-ium","type":"exact"},{"name":"N6,N6,N6-trimethyllysine cation","type":"exact"},{"name":"N6Me3+Lys","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"epsilon-trimethyllysine","type":"exact"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:00083"}


id: GO:0005823
data:
  {"annotated_genes":["SJAG_04901","SJAG_02795","SJAG_02246"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94382,95947,92969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061493"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the spindle pole body; the central plaque is embedded in the nuclear envelope.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02246":null,"SJAG_02795":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005816"],"is_obsolete":false,"name":"central plaque of spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005823","terms_by_termid":{"GO:0061493":null}}


id: GO:0008322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a Pro-Xaa bond to release a C-terminal amino acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete Pro-X carboxypeptidase activity (obsolete GO:0008322)","synonyms":[{"name":"Pro-X carboxypeptidase activity","type":"exact"}],"termid":"GO:0008322"}


id: PBO:0087355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor associated with the spliceosome; contains a U-box, a motif found in a class of ubiquitin ligases, and a WD40 domain; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087355"}


id: GO:0008349
data:
  {"annotated_genes":["SJAG_03384"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97007],"is_not":false,"summary":null,"term":"GO:0008349"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of serine and threonine residues in a mitogen-activated protein kinase kinase kinase (MAPKKK), resulting in activation of MAPKKK. MAPKKK signaling pathways relay, amplify and integrate signals from the plasma membrane to the nucleus in response to a diverse range of extracellular stimuli.","definition_xrefs":["GOC:bf","PMID:11790549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0004672","GO:0003674","GO:0003824","GO:0140096","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"MAP kinase kinase kinase kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9645442","Reactome:R-HSA-936991","Reactome:R-HSA-177692"],"synonyms":[{"name":"MAP4K activity","type":"exact"},{"name":"MAPKKKK","type":"exact"}],"termid":"GO:0008349","terms_by_termid":{"GO:0008349":null}}


id: GO:1901808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of capsanthin.","definition_xrefs":["GOC:yaf","MetaCyc:PWY-5174","PMID:10995282","GOC:TermGenie","UniPathway:UPA00806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"capsanthin metabolic process","termid":"GO:1901807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"capsanthin catabolic process","synonyms":[{"name":"capsanthin breakdown","type":"exact"},{"name":"capsanthin catabolism","type":"exact"},{"name":"capsanthin degradation","type":"exact"}],"termid":"GO:1901808"}


id: GO:0043292
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:go_curators","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"contractile muscle fiber","synonyms":[{"name":"contractile fibre","type":"exact"}],"termid":"GO:0043292"}


id: PBO:0058476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5583-2","termid":"PBO:0058476"}


id: FYPO:0009102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain less cytoplasmic microtubules than normal during interphase of the mitotic cell cycle.","direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in decreased numbers","termid":"FYPO:0003430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0002399","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"interphase microtubules present in decreased numbers","synonyms":[{"name":"decreased number of interphase microtubules","type":"exact"},{"name":"fewer microtubules present during mitotic interphase","type":"exact"}],"termid":"FYPO:0009102"}


id: GO:0044034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A biosynthetic process - chemical reactions and pathways resulting in the formation of substances - which involves more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism biosynthetic process (obsolete GO:0044034)","synonyms":[{"name":"multi-organism biosynthesis","type":"exact"},{"name":"multi-organismal biosynthesis","type":"exact"},{"name":"multi-organismal biosynthetic process","type":"exact"}],"termid":"GO:0044034"}


id: PBO:0082196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoate permease; ureidosuccinate permease; also transports dipeptides, though with lower affinity than for allantoate and ureidosuccinate; expression is constitutive but sensitive to nitrogen catabolite repression","termid":"PBO:0082196"}


id: GO:0086013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the cardiac muscle cell plasma membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during action potential","termid":"GO:0086011"},{"relation_name":"is_a","term_name":"cardiac muscle cell membrane repolarization","termid":"GO:0099622"},{"relation_name":"part_of","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"}


id: GO:0097251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene B4, a leukotriene composed of (6Z,8E,10E,14Z)-eicosatetraenoic acid having (5S)- and (12R)-hydroxy substituents.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"leukotriene B4 metabolic process","termid":"GO:0036102"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"leukotriene B4 biosynthetic process","synonyms":[{"name":"LTB4 anabolism","type":"exact"},{"name":"LTB4 biosynthesis","type":"exact"},{"name":"LTB4 formation","type":"exact"},{"name":"LTB4 synthesis","type":"exact"},{"name":"leukotriene B4 anabolism","type":"exact"},{"name":"leukotriene B4 biosynthesis","type":"exact"},{"name":"leukotriene B4 formation","type":"exact"},{"name":"leukotriene B4 synthesis","type":"exact"}],"termid":"GO:0097251"}


id: PBO:0077984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 6-1","termid":"PBO:0077984"}


id: GO:0060765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the androgen receptor signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033143"},{"relation_name":"regulates","term_name":"androgen receptor signaling pathway","termid":"GO:0030521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of androgen receptor signaling pathway","synonyms":[{"name":"regulation of androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060765"}


id: PR:O36015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA methyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02006","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.03c","secondary_identifiers":["UniProtKB:O36015"],"synonyms":[{"name":"2'-O-ribose RNA methyltransferase TRM7 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ1","type":"exact"}],"termid":"PR:O36015"}


id: GO:0048350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of paraxial mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate specification","termid":"GO:0048337"},{"relation_name":"is_a","term_name":"regulation of paraxial mesodermal cell fate specification","termid":"GO:0048349"},{"relation_name":"positively_regulates","term_name":"paraxial mesodermal cell fate specification","termid":"GO:0048348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of paraxial mesodermal cell fate specification","synonyms":[{"name":"activation of paraxial mesodermal cell fate specification","type":"narrow"},{"name":"stimulation of paraxial mesodermal cell fate specification","type":"narrow"},{"name":"up regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"up-regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"upregulation of paraxial mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048350"}


id: GO:0021645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the vagus nerve. This process pertains to the physical shaping of a rudimentary structure. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.","definition_xrefs":["ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"vagus nerve morphogenesis","termid":"GO:0021644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagus nerve structural organization","synonyms":[{"name":"CN X structural organization","type":"related"},{"name":"vagus nerve structural organisation","type":"exact"}],"termid":"GO:0021645"}


id: PBO:0082159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenine phosphoribosyltransferase; catalyzes the formation of AMP from adenine and 5-phosphoribosylpyrophosphate; involved in the salvage pathway of purine nucleotide biosynthesis; APT1 has a paralog, APT2, that arose from the whole genome duplication","termid":"PBO:0082159"}


id: PBO:0075162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 18","termid":"PBO:0075162"}


id: GO:0098897
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the spine apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"spine apparatus","termid":"GO:0097444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spine apparatus membrane","termid":"GO:0098897"}


id: PBO:0084500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for meiotic recombination; makes DNA double-strand breaks (DSB) during meiotic recombination, homolog pairing, and synaptonemal complex formation; role in meiotic DSB formation involves a topo-II-like transesterase mechanism; forms monotetrameric complex; covalently linked to DSBs through a 5'-phosphodiester bond between a catalytic tyrosine (Y135) and the DSB 5'- end; sequence similarity to a topo VI subunit from archaea, fission yeast rec12 and human SPO11","termid":"PBO:0084500"}


id: RO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a process and a barrier, where the process occurs in a region spanning the barrier. For cellular processes the barrier is typically a membrane. Examples include transport across a membrane and membrane depolarization.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"RO:0002479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_across","termid":"RO:0002021"}


id: PBO:0053067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte transmembrane adaptor 1","termid":"PBO:0053067"}


id: PBO:0113026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit; promotes nutrient responsive growth via the Ras-cAMP signaling pathway; phosphorylates and inhibits histone demethylase Jhd2p in response to glucose, promoting H3K4 trimethylation and maintaining H3K14 acetylation by preventing chromatin binding of Rpd3p; required for Sfl1p-mediated pseudohyphal growth; partially redundant with Tpk1p and Tpk3p; localizes to P-bodies during stationary phase; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0113026"}


id: PBO:0015212
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(2)","termid":"PBO:0015212"}


id: GO:0019084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The viral transcription that takes place after early transcription in the viral life cycle, and which involves the transcription of genes required for replication.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"middle viral transcription","synonyms":[{"name":"(delayed) early viral mRNA transcription","type":"related"}],"termid":"GO:0019084"}


id: GO:0052460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the frequency, rate or extent of the release of nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of symbiont process","termid":"GO:0051851"},{"relation_name":"part_of","term_name":"acquisition of nutrients from symbiont","termid":"GO:0051850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of nutrient release by symbiont","synonyms":[{"name":"modulation by host of nutrient release from symbiont","type":"exact"}],"termid":"GO:0052460"}


id: PBO:0030833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_N-methyl-N'-nitro-N-nitrosoguanidine","termid":"PBO:0030833"}


id: PBO:0059893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 16","termid":"PBO:0059893"}


id: PBO:0046736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease 3'-5' domain containing 2","termid":"PBO:0046736"}


id: PR:Q9USG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug190 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USG8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 190 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.06","synonyms":[{"name":"Spom972h-mug190","type":"exact"}],"termid":"PR:Q9USG8"}


id: PBO:0029392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleoplasm_during_cellular_response_to_hydroxyurea","termid":"PBO:0029392"}


id: GO:1905879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oogenesis.","definition_xrefs":["GOC:TermGenie","PMID:26434723","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oogenesis","synonyms":[{"name":"regulation of ovum development","type":"exact"}],"termid":"GO:1905879"}


id: GO:0008381
data:
  {"annotated_genes":["SJAG_02877","SJAG_04668","SJAG_05342","SJAG_02019","SJAG_02532"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91797],"is_not":false,"summary":null,"term":"GO:0008381"},{"annotations":[99873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[88503,88445,110028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an monoatomic ion by a channel that opens in response to a mechanical stress.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02019":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_04668":null,"SJAG_05342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"mechanosensitive monoatomic ion channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:1.A.23.2.1","GO:0022833"],"synonyms":[{"name":"mechanically gated channel activity","type":"exact"},{"name":"mechanically-gated channel activity","type":"exact"},{"name":"mechanically-gated ion channel activity","type":"exact"},{"name":"mechanosensitive ion channel activity","type":"broad"}],"termid":"GO:0008381","terms_by_termid":{"GO:0008381":null,"GO:0015275":null,"GO:0140135":null}}


id: PBO:0062414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 43 pseudogene","termid":"PBO:0062414"}


id: CHEBI:15379
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioxygen","termid":"CHEBI:15379"}


id: PBO:0059681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 47","termid":"PBO:0059681"}


id: PBO:0088499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein Ubx4","termid":"PBO:0088499"}


id: GO:0047726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ferrocytochrome c + Fe3+ = ferricytochrome c + Fe2+.","definition_xrefs":["EC:1.9.98.1","MetaCyc:IRON--CYTOCHROME-C-REDUCTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"iron-cytochrome-c reductase activity","secondary_identifiers":["RHEA:15617"],"synonyms":[{"name":"ferrocytochrome-c:Fe3+ oxidoreductase activity","type":"related"},{"name":"iron-cytochrome c reductase activity","type":"related"}],"termid":"GO:0047726"}


id: GO:1903117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin filament organization involved in cytokinetic actomyosin contractile ring assembly.","definition_xrefs":["PMID:24798735","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin filament organization involved in cytokinetic actomyosin contractile ring assembly (obsolete GO:1903117)","synonyms":[{"name":"regulation of actin filament organisation of constriction ring assembly","type":"related"},{"name":"regulation of actin filament organisation of contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of actin filament organisation of cytokinesis, contractile ring assembly","type":"related"},{"name":"regulation of actin filament organization of constriction ring assembly","type":"related"},{"name":"regulation of actin filament organization of contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of actin filament organization of cytokinesis, contractile ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of constriction ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of contractile ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin contractile ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, contractile ring assembly","type":"related"}],"termid":"GO:1903117"}


id: PBO:0080408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS37B subunit of ESCRT-I","termid":"PBO:0080408"}


id: GO:0098984
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse in which pre and post-synaptic cells are neurons.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuron to neuron synapse","termid":"GO:0098984"}


id: PR:G2TRM6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.13","synonyms":[{"name":"Spom972h-new4","type":"exact"}],"termid":"PR:G2TRM6"}


id: PBO:0029241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_centromere_outer_repeat","termid":"PBO:0029241"}


id: PBO:0080945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 1","termid":"PBO:0080945"}


id: PBO:0080800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 6","termid":"PBO:0080800"}


id: GO:0103096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihomomethionine + 2 O2 + 2 NADPH + 2 H+ = 5-methylthiopentanaldoxime + 3 H2O + carbon dioxide + 2 NADP.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"CYP79F1 dihomomethionine monooxygenase activity","secondary_identifiers":["RHEA:32719","MetaCyc:RXNQT-4309"],"termid":"GO:0103096"}


id: GO:2000059
data:
  {"annotated_genes":["SJAG_00052","SJAG_03048","SJAG_00475"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[86518,103041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of proteolysis involved in protein catabolic process","termid":"GO:1903051"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-dependent protein catabolic process","termid":"GO:2000058"},{"relation_name":"negatively_regulates","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of protein degradation tagging activity","type":"broad"},{"name":"negative regulation of protein ubiquitination during ubiquitin-dependent protein breakdown","type":"narrow"},{"name":"negative regulation of protein ubiquitination during ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"negative regulation of protein ubiquitination during ubiquitin-dependent protein catabolism","type":"narrow"},{"name":"negative regulation of protein ubiquitination during ubiquitin-dependent protein degradation","type":"narrow"},{"name":"negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"negative regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"negative regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolism","type":"narrow"},{"name":"negative regulation of protein ubiquitylation during ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"negative regulation of protein ubiquitylation during ubiquitin-dependent protein catabolism","type":"narrow"}],"termid":"GO:2000059","terms_by_termid":{"GO:0032435":null,"GO:1905785":null}}


id: PBO:0078501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 3-1","termid":"PBO:0078501"}


id: PBO:0082151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyltransferase that converts diacylglycerol to triacylglycerol (TGA); one of several acyltransferases that contribute to TGA synthesis; relocates from ER to nuclear membrane in response cell cycle and starvation signals; Lro1p and Dga1p can O-acylate ceramides; putative homolog of human lecithin cholesterol acyltransferase","termid":"PBO:0082151"}


id: PBO:0002539
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis eight","termid":"PBO:0002539"}


id: PR:Q9USH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP31B10.02 gene.","definition_xrefs":["UniProtKB:Q9USH2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0651 protein P31B10.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.02","synonyms":[{"name":"Spom972h-SPCP31B10.02","type":"exact"}],"termid":"PR:Q9USH2"}


id: GO:0046253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products, in the absence of oxygen.","definition_xrefs":["GOC:ai","PMID:8573493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic toluene metabolic process","termid":"GO:0018971"},{"relation_name":"is_a","term_name":"toluene biosynthetic process","termid":"GO:0046252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic toluene biosynthetic process","synonyms":[{"name":"anaerobic toluene anabolism","type":"exact"},{"name":"anaerobic toluene biosynthesis","type":"exact"},{"name":"anaerobic toluene formation","type":"exact"},{"name":"anaerobic toluene synthesis","type":"exact"}],"termid":"GO:0046253"}


id: PBO:0108951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOPL pseudogene 3","termid":"PBO:0108951"}


id: PBO:0066151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 7","termid":"PBO:0066151"}


id: GO:0005674
data:
  {"annotated_genes":["SJAG_00735","SJAG_00095","SJAG_04852"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89608,98399,111068],"is_not":false,"summary":null,"term":"GO:0005674"}]},"cv_name":"cellular_component","definition":"A general transcription initiation factor which in humans consists of a heterodimer of an alpha and a beta subunit. Helps recruit RNA polymerase II to the initiation complex and promotes translation elongation.","definition_xrefs":["GOC:jl","PMID:7597077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00735":null,"SJAG_04852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0032991","GO:0005654","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIF complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005674","terms_by_termid":{"GO:0005674":null}}


id: PBO:0089221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L5","termid":"PBO:0089221"}


id: PBO:0045584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 6","termid":"PBO:0045584"}


id: GO:0019400
data:
  {"annotated_genes":["SJAG_03609","SJAG_00237","SJAG_04048","SJAG_01012","SJAG_04192","SJAG_04320","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[102582,90081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[112450,89153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[89154,64702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006071"},{"annotations":[84742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[101129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alditols, any polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00409":null,"SJAG_01012":null,"SJAG_03609":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"alditol metabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"alditol metabolism","type":"exact"}],"termid":"GO:0019400","terms_by_termid":{"GO:0006062":null,"GO:0006071":null,"GO:0006114":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null}}


id: GO:0043565
data:
  {"annotated_genes":["SJAG_01307","SJAG_05214","SJAG_03217","SJAG_03923","SJAG_02813","SJAG_03735","SJAG_01441","SJAG_00247","SJAG_05301","SJAG_04749","SJAG_02810","SJAG_02052","SJAG_00883","SJAG_02956","SJAG_06599","SJAG_00792","SJAG_02458","SJAG_01762","SJAG_04527","SJAG_02212","SJAG_04009","SJAG_04036","SJAG_02048","SJAG_00037","SJAG_03092","SJAG_02938","SJAG_02752","SJAG_01378","SJAG_04611","SJAG_01777","SJAG_05253","SJAG_01062","SJAG_00112","SJAG_00896","SJAG_02348","SJAG_03354","SJAG_03879","SJAG_00304","SJAG_00073","SJAG_03918","SJAG_04245","SJAG_02252","SJAG_05006","SJAG_01725","SJAG_03241","SJAG_00958","SJAG_03346","SJAG_01267","SJAG_02472","SJAG_04421","SJAG_05372","SJAG_03143","SJAG_00802","SJAG_01343","SJAG_03519","SJAG_00692","SJAG_03538","SJAG_05343","SJAG_02569","SJAG_01583","SJAG_02747","SJAG_04813","SJAG_02254","SJAG_05247","SJAG_00163","SJAG_01698","SJAG_02394","SJAG_03855","SJAG_04766","SJAG_01157","SJAG_00386","SJAG_03911","SJAG_04191","SJAG_05339","SJAG_00861","SJAG_03622","SJAG_00664","SJAG_00741","SJAG_02691","SJAG_00266","SJAG_05331","SJAG_01930","SJAG_03927","SJAG_04213","SJAG_04372","SJAG_02311","SJAG_02138","SJAG_05242","SJAG_02149","SJAG_05239","SJAG_00926","SJAG_06576","SJAG_02242","SJAG_03216","SJAG_00307","SJAG_04249","SJAG_01243","SJAG_05153","SJAG_02194","SJAG_00698","SJAG_03473","SJAG_02218","SJAG_01495","SJAG_02415","SJAG_05979","SJAG_02922","SJAG_04712","SJAG_00987","SJAG_03905","SJAG_01707","SJAG_02362","SJAG_01532","SJAG_02730","SJAG_00124","SJAG_04917","SJAG_03120","SJAG_01745","SJAG_00693","SJAG_02406","SJAG_00979","SJAG_04839","SJAG_03183","SJAG_00585","SJAG_04855","SJAG_00202","SJAG_00421","SJAG_04863","SJAG_03484","SJAG_02709","SJAG_03014","SJAG_00939","SJAG_04388","SJAG_04092","SJAG_04091","SJAG_05265","SJAG_05288","SJAG_02326","SJAG_03388","SJAG_05337","SJAG_01740","SJAG_00984","SJAG_04584","SJAG_01677","SJAG_02800","SJAG_01694","SJAG_00210","SJAG_01916","SJAG_03451"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68056,84924,88852,89366,90831,90912,92492,98389,107984,111117,111347,114135,114141],"is_not":false,"summary":null,"term":"GO:0043565"},{"annotations":[87453,112567,101564,98167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019237"},{"annotations":[112169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000987"},{"annotations":[86780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001046"},{"annotations":[107738,106322,93546,104148,111202,101568,109284,93440,107482,103939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003688"},{"annotations":[85893,102227,85301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003691"},{"annotations":[91198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"},{"annotations":[89449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990943"},{"annotations":[92173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035939"},{"annotations":[91243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001018"},{"annotations":[99016,91515,98281,99458,103332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000182"},{"annotations":[98386,111116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043110"},{"annotations":[98387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"},{"annotations":[112546,89266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001165"},{"annotations":[108033,105251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001164"},{"annotations":[99459,105837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001163"},{"annotations":[98799,77103,90172,106826,94226,93642,95602,102339,102821,104905,109786,110674,112708,108024,93643,95907,92395,104077,105286,90847,107156,110927,93640,84593,88851,89816,93644,104323,88015,93491,112569,109508,108023,84168,85166,105285,97590,101925,107982,86216,104732,98388,103149,90830,106980,110184,114419,89393,93172,96226,96599,91806,99664,89333,100868,103095,105149,102454,84537,93040,88564,112172,113568,83729,105453,100544,106964,92688,114133,103679,98336,94534,85587,93641,93414,84098,79262,98150,105792,92154,102197,106996,100549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000978"},{"annotations":[103150,104906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"},{"annotations":[85403,107983,91692,90252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000979"},{"annotations":[103680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001162"},{"annotations":[88734,111720,114003,98337,84923,114134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000977"},{"annotations":[95679,84322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000992"},{"annotations":[95681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"},{"annotations":[95682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001003"},{"annotations":[91695,99173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001006"},{"annotations":[103151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044374"},{"annotations":[84068,111118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990837"},{"annotations":[107627,91199,92176,107652,104220,106466,110702,85303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043047"},{"annotations":[103020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071443"},{"annotations":[107046,104037,107654,111613,93676,101190,85895,95824,110386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042162"},{"annotations":[70975,92911,109737,99219,71822,104560,75347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000976"},{"annotations":[98390,103899,95988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001147"}]},"cv_name":"molecular_function","definition":"Binding to DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":148,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00073":null,"SJAG_00112":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00202":null,"SJAG_00210":null,"SJAG_00247":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00307":null,"SJAG_00386":null,"SJAG_00421":null,"SJAG_00585":null,"SJAG_00664":null,"SJAG_00692":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00741":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00883":null,"SJAG_00896":null,"SJAG_00926":null,"SJAG_00939":null,"SJAG_00958":null,"SJAG_00979":null,"SJAG_00984":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01157":null,"SJAG_01243":null,"SJAG_01267":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01378":null,"SJAG_01441":null,"SJAG_01495":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01677":null,"SJAG_01694":null,"SJAG_01698":null,"SJAG_01707":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01745":null,"SJAG_01762":null,"SJAG_01777":null,"SJAG_01916":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_02218":null,"SJAG_02242":null,"SJAG_02252":null,"SJAG_02254":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02348":null,"SJAG_02362":null,"SJAG_02394":null,"SJAG_02406":null,"SJAG_02415":null,"SJAG_02458":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02691":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02747":null,"SJAG_02752":null,"SJAG_02800":null,"SJAG_02810":null,"SJAG_02813":null,"SJAG_02922":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03014":null,"SJAG_03092":null,"SJAG_03120":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03216":null,"SJAG_03217":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03354":null,"SJAG_03388":null,"SJAG_03451":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03855":null,"SJAG_03879":null,"SJAG_03905":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_03923":null,"SJAG_03927":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04091":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04213":null,"SJAG_04245":null,"SJAG_04249":null,"SJAG_04372":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04527":null,"SJAG_04584":null,"SJAG_04611":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04766":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_04863":null,"SJAG_04917":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05214":null,"SJAG_05239":null,"SJAG_05242":null,"SJAG_05247":null,"SJAG_05253":null,"SJAG_05265":null,"SJAG_05288":null,"SJAG_05301":null,"SJAG_05331":null,"SJAG_05337":null,"SJAG_05339":null,"SJAG_05343":null,"SJAG_05372":null,"SJAG_05979":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"sequence specific DNA binding","type":"exact"}],"termid":"GO:0043565","terms_by_termid":{"GO:0000182":null,"GO:0000976":null,"GO:0000977":null,"GO:0000978":null,"GO:0000979":null,"GO:0000987":null,"GO:0000992":null,"GO:0001002":null,"GO:0001003":null,"GO:0001006":null,"GO:0001018":null,"GO:0001046":null,"GO:0001147":null,"GO:0001162":null,"GO:0001163":null,"GO:0001164":null,"GO:0001165":null,"GO:0003688":null,"GO:0003691":null,"GO:0019237":null,"GO:0035939":null,"GO:0042162":null,"GO:0043047":null,"GO:0043110":null,"GO:0043565":null,"GO:0044374":null,"GO:0044377":null,"GO:0071443":null,"GO:0098505":null,"GO:0110035":null,"GO:1990837":null,"GO:1990943":null}}


id: PBO:0042240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 3","termid":"PBO:0042240"}


id: GO:0090251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained in, a specific location in a cell that contributes to the establishment of planar polarity.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization involved in establishment of planar polarity","synonyms":[{"name":"protein localisation involved in establishment of planar polarity","type":"exact"}],"termid":"GO:0090251"}


id: GO:0102587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-[2''-O-(2'''-O-(sinapoyl) xylosyl) 6''-O-(p-coumaroyl) glucoside] 5-O-[6''-O-(malonyl) glucoside + 1-O-sinapoyl-beta-D-glucose = cyanidin 3-O-[6-O-(4-O-beta-D-glucosyl-p-coumaroyl)-2-O-(2-O-sinapoyl-beta-D-xylosyl)-beta-D-glucosyl]-5-O-(6-O-malonyl-beta-D-glucoside) + trans-sinapate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-[2''-O-(2''-O-(sinapoyl) xylosyl) 6''-O-(p-O-(glucosyl)-p-coumaroyl) glucoside] 5-O-[6''-O-(malonyl) glucoside] sinapoylglucose glucosyltransferase activity (obsolete GO:0102587)","termid":"GO:0102587"}


id: PBO:0004731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiazole biosynthetic enzyme","termid":"PBO:0004731"}


id: GO:0046205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nor-spermidine, a compound related to spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"nor-spermidine metabolic process","termid":"GO:0046204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nor-spermidine catabolic process","synonyms":[{"name":"nor-spermidine breakdown","type":"exact"},{"name":"nor-spermidine catabolism","type":"exact"},{"name":"nor-spermidine degradation","type":"exact"}],"termid":"GO:0046205"}


id: GO:0008897
data:
  {"annotated_genes":["SJAG_01955","SJAG_03180","SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86470,93431,93802],"is_not":false,"summary":null,"term":"GO:0008897"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + substrate-serine = adenosine 3',5'-bisphosphate + substrate-serine-4'-phosphopantetheine. The transfer of the 4'-phosphopantetheine (Ppant) co-factor from coenzyme A to the hydroxyl side chain of the serine residue of acyl- or peptidyl-carrier protein (ACP or PCP) to convert them from the apo to the holo form.","definition_xrefs":["PMID:8939709","EC:2.7.8.7","PMID:10320345","PMID:11867633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01955":null,"SJAG_03180":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016780","GO:0003824"],"is_obsolete":false,"name":"holo-[acyl-carrier-protein] synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-199202","RHEA:12068","GO:0008958","MetaCyc:HOLO-ACP-SYNTH-RXN"],"synonyms":[{"name":"4'-phosphopantetheinyl transferase activity","type":"related"},{"name":"4'-phosphopantetheinyltransferase activity","type":"exact"},{"name":"ACPS activity","type":"related"},{"name":"AcpS","type":"related"},{"name":"CoA-[4'-phosphopantetheine]:apo-acyl-carrier-protein 4'-pantetheinephosphotransferase activity","type":"related"},{"name":"CoA:apo-acyl-carrier-protein pantetheinephosphotransferase activity","type":"related"},{"name":"L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase activity","type":"narrow"},{"name":"P-pant transferase activity","type":"related"},{"name":"PPTase activity","type":"related"},{"name":"acyl carrier protein holoprotein (holo-ACP) synthetase activity","type":"related"},{"name":"acyl carrier protein synthase activity","type":"related"},{"name":"acyl carrier protein synthetase activity","type":"related"},{"name":"alpha-aminoadipate reductase phosphopantetheinyl transferase activity","type":"exact"},{"name":"alpha-aminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase activity","type":"related"},{"name":"alphaaminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase activity","type":"related"},{"name":"coenzyme A:fatty acid synthetase apoenzyme 4'-phosphopantetheine transferase activity","type":"related"},{"name":"holo-ACP synthase activity","type":"related"},{"name":"holo-ACP synthetase activity","type":"related"},{"name":"holo-[peptidyl-carrier protein] synthase activity","type":"narrow"},{"name":"holo-acyl-carrier-protein synthase activity","type":"related"},{"name":"holosynthase activity","type":"related"},{"name":"phosphopantetheinyl transferase","type":"related"},{"name":"phosphopantetheinyltransferase activity","type":"exact"}],"termid":"GO:0008897","terms_by_termid":{"GO:0008897":null}}


id: PBO:0087474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of both RNase MRP and nuclear RNase P; RNase MRP cleaves pre-rRNA, while nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; binds to the RPR1 RNA subunit in RNase P","termid":"PBO:0087474"}


id: FYPO:0006349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more specific promoter elements is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to chromatin at promoter","synonyms":[{"name":"abolished protein localisation to chromatin at promoter during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at promoter during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at promoter element","type":"exact"},{"name":"protein localization to chromatin at promoter abolished","type":"exact"}],"termid":"FYPO:0006349"}


id: FYPO:0003233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at heterochromatin islands is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at heterochromatin island during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me at heterochromatin island during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0003233"}


id: PBO:0087884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor; recruits the Cyc8p-Tup1p complex to promoters; mediates glucose repression and negatively regulates a variety of processes including filamentous growth and alkaline pH response; activated in stochastic pulses of nuclear localization in response to low glucose","termid":"PBO:0087884"}


id: PBO:0054658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2064","termid":"PBO:0054658"}


id: GO:0046052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UTP, uridine (5'-)triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate catabolic process","termid":"GO:0009210"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"UTP metabolic process","termid":"GO:0046051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UTP catabolic process","synonyms":[{"name":"UTP breakdown","type":"exact"},{"name":"UTP catabolism","type":"exact"},{"name":"UTP degradation","type":"exact"},{"name":"UTP hydrolysis","type":"exact"}],"termid":"GO:0046052"}


id: GO:1905537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eukaryotic translation initiation factor 4F complex assembly.","definition_xrefs":["GOC:bc","GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:18426977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of eukaryotic translation initiation factor 4F complex assembly","termid":"GO:1905535"},{"relation_name":"positively_regulates","term_name":"eukaryotic translation initiation factor 4F complex assembly","termid":"GO:0097010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of eukaryotic translation initiation factor 4F complex assembly","synonyms":[{"name":"activation of eIF-4F assembly","type":"narrow"},{"name":"activation of eIF4F assembly","type":"narrow"},{"name":"activation of eukaryotic translation initiation factor 4F complex assembly","type":"narrow"},{"name":"positive regulation of eIF-4F assembly","type":"exact"},{"name":"positive regulation of eIF4F assembly","type":"exact"},{"name":"up regulation of eIF-4F assembly","type":"exact"},{"name":"up regulation of eIF4F assembly","type":"exact"},{"name":"up regulation of eukaryotic translation initiation factor 4F complex assembly","type":"exact"},{"name":"up-regulation of eIF-4F assembly","type":"exact"},{"name":"up-regulation of eIF4F assembly","type":"exact"},{"name":"up-regulation of eukaryotic translation initiation factor 4F complex assembly","type":"exact"},{"name":"upregulation of eIF-4F assembly","type":"exact"},{"name":"upregulation of eIF4F assembly","type":"exact"},{"name":"upregulation of eukaryotic translation initiation factor 4F complex assembly","type":"exact"}],"termid":"GO:1905537"}


id: PBO:0069145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 396, pseudogene","termid":"PBO:0069145"}


id: GO:0051721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to protein phosphatase 2A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase binding","termid":"GO:0019903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"protein phosphatase 2A binding","synonyms":[{"name":"protein phosphatase 2 binding","type":"related"}],"termid":"GO:0051721"}


