# terms

id: FYPO:0004061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UV-damage excision repair occurs to a lower extent than normal during G1 phase of the mitotic cell cycle. UV-damage excision repair is a DNA repair process that is initiated by an endonuclease that introduces a single-strand incision immediately 5' of a UV-induced damage site, and that acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["PomBase:mah","GO:0070914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased UV-damage excision repair","termid":"FYPO:0004031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0001320","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"decreased UV-damage excision repair during mitotic G1 phase","synonyms":[{"name":"decreased UV-damage excision repair during G1 phase of mitotic cell cycle","type":"related"},{"name":"decreased UV-damage excision repair during mitotic G1 during vegetative growth","type":"exact"},{"name":"reduced UV-damage excision repair during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004061"}


id: PBO:0053908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1202","termid":"PBO:0053908"}


id: FYPO:0006490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of M phase of the mitotic cell cycle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic M phase progression","termid":"FYPO:0000607"},{"relation_name":"is_a","term_name":"decreased duration of mitotic cell cycle phase","termid":"FYPO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased duration of mitotic M phase","synonyms":[{"name":"decreased duration of M phase during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitosis","type":"related"},{"name":"decreased duration of mitosis during mitotic cell cycle","type":"related"},{"name":"decreased duration of mitosis during vegetative growth","type":"related"},{"name":"decreased duration of mitotic nuclear division","type":"related"},{"name":"decreased mitotic M phase duration","type":"exact"},{"name":"decreased mitotic M phase duration during vegetative growth","type":"exact"},{"name":"reduced duration of mitotic M phase","type":"exact"}],"termid":"FYPO:0006490"}


id: GO:0046032
data:
  {"annotated_genes":["SJAG_04334","SJAG_04192","SJAG_01310","SJAG_02369","SJAG_04495","SJAG_06622","SJAG_00633","SJAG_00685","SJAG_03373","SJAG_05314","SJAG_00027","SJAG_03903","SJAG_03660","SJAG_00839","SJAG_06621","SJAG_02945","SJAG_02135","SJAG_03828","SJAG_00461","SJAG_02009","SJAG_00605","SJAG_04048","SJAG_02796","SJAG_03852","SJAG_02107"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99491,99749,105491,105025,105489,90630,105027,94376,105023,101540,101906,105024,101541,105026,105490,91120,105022,105492,105488,112448,100560,105028,105486,105487,101539,101905,94106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107671,94293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[72017,75002],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ADP, adenosine 5'-diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate catabolic process","termid":"GO:0009181"},{"relation_name":"is_a","term_name":"ADP metabolic process","termid":"GO:0046031"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ADP catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ADP breakdown","type":"exact"},{"name":"ADP catabolism","type":"exact"},{"name":"ADP degradation","type":"exact"}],"termid":"GO:0046032","terms_by_termid":{"GO:0006096":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: GO:0032492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a molecule of oomycetes origin is received and converted into a molecular signal.","definition_xrefs":["GOC:rl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of oomycetes origin","termid":"GO:0002240"},{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"detection of external biotic stimulus","termid":"GO:0098581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of molecule of oomycetes origin","synonyms":[{"name":"detection of oomycetes associated molecule","type":"exact"}],"termid":"GO:0032492"}


id: PBO:0011165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific guanyl-nucleotide exchange factor Spo13","termid":"PBO:0011165"}


id: FYPO:0004726
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle orientation correction is normal (i.e. indistinguishable from wild type). Spindle orientation correction is the process by which a spindle that has formed in, or moved into, an incorrect orientation is restored to the correct orientation (parallel to the long axis of the cell).","definition_xrefs":["PomBase:mah","PMID:15772152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic spindle orientation correction","synonyms":[{"name":"normal correction of mitotic spindle orientation","type":"exact"},{"name":"normal mitotic spindle orientation correction during vegetative growth","type":"exact"},{"name":"normal repair of mitotic mono-orientation defect","type":"exact"},{"name":"normal spindle orientation correction during mitosis","type":"exact"},{"name":"normal spindle orientation correction during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004726"}


id: PBO:0067678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 863, pseudogene","termid":"PBO:0067678"}


id: GO:2000653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of genetic imprinting.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of genetic imprinting (obsolete GO:2000653)","synonyms":[{"name":"regulation of DNA imprinting","type":"exact"}],"termid":"GO:2000653"}


id: GO:0033882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choloyl-CoA + H2O = cholate + CoA.","definition_xrefs":["EC:3.1.2.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"choloyl-CoA hydrolase activity","secondary_identifiers":["MetaCyc:3.1.2.27-RXN","RHEA:14541"],"synonyms":[{"name":"PTE-2","type":"related"},{"name":"chenodeoxycholoyl-coenzyme A thioesterase activity","type":"related"},{"name":"choloyl-coenzyme A thioesterase activity","type":"related"},{"name":"peroxisomal acyl-CoA thioesterase 2 activity","type":"narrow"}],"termid":"GO:0033882"}


id: PBO:0000257
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.3.4","termid":"PBO:0000257"}


id: PR:O36020
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug126 gene.","definition_xrefs":["UniProtKB:O36020","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 126 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.08","synonyms":[{"name":"Spom972h-mug126","type":"exact"}],"termid":"PR:O36020"}


id: PBO:0055771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand of numb-protein X 1","termid":"PBO:0055771"}


id: PBO:0049692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid oxidase 2","termid":"PBO:0049692"}


id: PATO:0001214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001214 temparature_unit (obsolete PATO:0001214)","termid":"PATO:0001214"}


id: GO:0032449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex comprising Bcl10, MALT1 and a CARD domain-containing protein (CARD9, CARD10 or CARD11); plays a role in signal transduction during NF-kappaB activation.","definition_xrefs":["PMID:12909454","PMID:30467369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CBM complex","synonyms":[{"name":"CARMA1-BCL10-Malt1 complex","type":"exact"}],"termid":"GO:0032449"}


id: PBO:0074874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 56B","termid":"PBO:0074874"}


id: PBO:0057479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 598","termid":"PBO:0057479"}


id: GO:0034175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 12 signaling pathway.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 12 signaling pathway","termid":"GO:0034174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 12 signaling pathway","synonyms":[{"name":"regulation of TLR12 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 12 signalling pathway","type":"exact"}],"termid":"GO:0034175"}


id: GO:0048767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the root hair grows longer.","definition_xrefs":["GOC:jid","PMID:12468740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"root hair cell development","termid":"GO:0080147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root hair elongation","termid":"GO:0048767"}


id: GO:0033231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of carbohydrates out of a cell or organelle.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transport","termid":"GO:0008643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"carbohydrate export","termid":"GO:0033231"}


id: PBO:0064821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3C","termid":"PBO:0064821"}


id: PBO:0066689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of MON1-CCZ1","termid":"PBO:0066689"}


id: PBO:0055051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2466","termid":"PBO:0055051"}


id: PR:O94355
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rxt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein rxt2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.06c","synonyms":[{"name":"Spom972h-rxt2","type":"exact"}],"termid":"PR:O94355"}


id: PBO:0056670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 8","termid":"PBO:0056670"}


id: GO:0140299
data:
  {"annotated_genes":["SJAG_02267","SJAG_02748","SJAG_02945","SJAG_01620","SJAG_03405","SJAG_02708","SJAG_01419","SJAG_01807","SJAG_02135","SJAG_06622","SJAG_00642","SJAG_03903","SJAG_02183","SJAG_02657","SJAG_00331","SJAG_03828","SJAG_03715","SJAG_02187","SJAG_01587","SJAG_02853","SJAG_00792","SJAG_01410","SJAG_02226","SJAG_00027","SJAG_00757","SJAG_06621"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96653,87862,96685,84732,95173,93033,102156,100664,88770,112539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140664"},{"annotations":[108960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140786"},{"annotations":[90170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140482"},{"annotations":[105068,105065,105066,105069,107811,105067,105064,105070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019826"},{"annotations":[91364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140442"},{"annotations":[115036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140550"},{"annotations":[114347,87262,91365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000155"},{"annotations":[110996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032935"},{"annotations":[99542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106219"}]},"cv_name":"molecular_function","definition":"Binding to a small molecule and eliciting a change in the protein's activity in response to the intracellular level of that small molecule.","definition_xrefs":["PMID:26328879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00331":null,"SJAG_00642":null,"SJAG_00757":null,"SJAG_00792":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01587":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02657":null,"SJAG_02708":null,"SJAG_02748":null,"SJAG_02853":null,"SJAG_02945":null,"SJAG_03405":null,"SJAG_03715":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"small molecule sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"small molecular sensor activity","type":"exact"},{"name":"small molecule sensing activity","type":"exact"}],"termid":"GO:0140299","terms_by_termid":{"GO:0000155":null,"GO:0019826":null,"GO:0032935":null,"GO:0106219":null,"GO:0140442":null,"GO:0140482":null,"GO:0140550":null,"GO:0140664":null,"GO:0140786":null}}


id: GO:0097342
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex whose core components are the receptor-interacting serine/threonine-protein kinases RIPK1 and RIPK3 (also called RIP1 and RIP3). Formation of the ripoptosome can induce an extrinsic apoptotic signaling pathway or a necroptotic signaling pathway. The composition of this protein complex may depend on several factors including nature of the signal, cell type and more.","definition_xrefs":["PMID:22265414","PMID:22274400","GOC:mtg_apoptosis","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"ripoptosome","synonyms":[{"name":"TNFR1 complex II","type":"narrow"},{"name":"Tnfr1-CII","type":"narrow"},{"name":"necrosome","type":"related"}],"termid":"GO:0097342"}


id: GO:0071439
data:
  {"annotated_genes":["SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90996],"is_not":false,"summary":null,"term":"GO:0071439"}]},"cv_name":"cellular_component","definition":"A protein complex that consists of three clathrin heavy chains and three clathrin light chains, organized into a symmetrical three-legged structure called a triskelion. In clathrin-coated vesicles clathrin is the main component of the coat and forms a polymeric mechanical scaffold on the vesicle surface.","definition_xrefs":["PMID:16493411","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"clathrin coat","termid":"GO:0030118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"clathrin complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"clathrin triskelion","type":"exact"}],"termid":"GO:0071439","terms_by_termid":{"GO:0071439":null}}


id: FYPO:0002168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing ethyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on ethyl methanesulfonate","synonyms":[{"name":"normal cell population growth in presence of ethyl methanesulfonate","type":"exact"},{"name":"normal cell population growth on EMS","type":"exact"},{"name":"normal cell population growth on ethyl methanesulfonate","type":"exact"},{"name":"normal cellular response to ethyl methanesulfonate","type":"related"},{"name":"normal growth on ethyl methanesulphonate","type":"exact"},{"name":"normal vegetative cell population growth on ethyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002168"}


id: GO:0031310
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the vacuolar membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of vacuolar membrane (obsolete GO:0031310)","synonyms":[{"name":"intrinsic to vacuolar membrane","type":"narrow"}],"termid":"GO:0031310"}


id: PBO:0073437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 6","termid":"PBO:0073437"}


id: PBO:0035842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_pausing_at_G4_motif","termid":"PBO:0035842"}


id: GO:0008313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with the ligand Gurken to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete gurken-activated receptor activity (obsolete GO:0008313)","synonyms":[{"name":"gurken receptor activity","type":"exact"}],"termid":"GO:0008313"}


id: PBO:0047083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 136 member B, pseudogene","termid":"PBO:0047083"}


id: PBO:0041683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colon adenocarcinoma hypermethylated","termid":"PBO:0041683"}


id: PBO:0074457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 2","termid":"PBO:0074457"}


id: PBO:0063553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEG3 antisense RNA 1","termid":"PBO:0063553"}


id: PBO:0053590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 616","termid":"PBO:0053590"}


id: PBO:0041443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C9orf78 pseudogene 2","termid":"PBO:0041443"}


id: GO:0160033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the Toll receptor ligand protein activation cascade.","definition_xrefs":["PMID:23632253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"regulates","term_name":"Toll receptor ligand protein activation cascade","termid":"GO:0160032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of Toll receptor ligand protein activation cascade","termid":"GO:0160033"}


id: null:local:null
data:
  {"annotation_feature_type":"gene","cv_name":"null","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"null","termid":"null:local:null"}


id: PBO:0053786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1037","termid":"PBO:0053786"}


id: GO:0047750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-alpha-cholest-7-en-3-beta-ol = 5-alpha-cholest-8-en-3-beta-ol.","definition_xrefs":["RHEA:15281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"cholestenol delta-isomerase activity","secondary_identifiers":["EC:5.3.3.5","MetaCyc:RXN66-25"],"synonyms":[{"name":"cholestenol D-isomerase activity","type":"exact"},{"name":"delta7-cholestenol delta7-delta8-isomerase activity","type":"related"}],"termid":"GO:0047750"}


id: PBO:0077107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 10B","termid":"PBO:0077107"}


id: GO:0098952
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of spine apparatus membrane (obsolete GO:0098952)","synonyms":[{"name":"intrinsic to spine apparatus membrane","type":"exact"}],"termid":"GO:0098952"}


id: GO:1990074
data:
  {"annotated_genes":["SJAG_03876","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91736],"is_not":false,"summary":null,"term":"GO:1990074"},{"annotations":[87768],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a messenger RNA (mRNA) molecule, initiated by the enzymatic addition of a sequence of uridylyl residues (polyuridylation) at the 3' end of the target mRNA.","definition_xrefs":["PMID:23503588","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA catabolic process","termid":"GO:0006402"},{"relation_name":"is_a","term_name":"modification-dependent macromolecule catabolic process","termid":"GO:0043632"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03876":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"polyuridylation-dependent mRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990074","terms_by_termid":{"GO:0036450":null,"GO:1990074":null}}


id: GO:1990932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 5.8S ribosomal RNA, a eukaryotic ribosomal RNA which forms a complex with 28S RNA.","definition_xrefs":["PMID:11716358","PMID:15527424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"5.8S rRNA binding","termid":"GO:1990932"}


id: PBO:0061359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 19","termid":"PBO:0061359"}


id: GO:0072505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent inorganic anions within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete divalent inorganic anion homeostasis (obsolete GO:0072505)","termid":"GO:0072505"}


id: PATO:0000469
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000469 high (obsolete PATO:0000469)","termid":"PATO:0000469"}


id: GO:0090345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular organohalogen metabolic process","termid":"GO:0090345"}


id: PBO:0034352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-evolutionary_variant_of","termid":"PBO:0034352"}


id: PBO:0066586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho related BTB domain containing 1","termid":"PBO:0066586"}


id: FYPO:0001744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of biotin into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal biotin import","synonyms":[{"name":"abnormal biotin import across plasma membrane","type":"exact"},{"name":"abnormal biotin import during mitotic cell cycle","type":"related"},{"name":"abnormal biotin import during vegetative growth","type":"exact"},{"name":"abnormal biotin import into cell","type":"exact"},{"name":"abnormal biotin uptake","type":"exact"}],"termid":"FYPO:0001744"}


id: PBO:0047027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 91 member A2, pseudogene","termid":"PBO:0047027"}


id: PBO:0061852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin 2","termid":"PBO:0061852"}


id: GO:0090262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the nucleotide-excision repair process that carries out preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide-excision repair","termid":"GO:2000819"},{"relation_name":"regulates","term_name":"transcription-coupled nucleotide-excision repair","termid":"GO:0006283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of transcription-coupled nucleotide-excision repair","termid":"GO:0090262"}


id: GO:0061464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the plasma membrane that contributes to the structure of a cell-substrate junction.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane part of cell-substrate junction (obsolete GO:0061464)","termid":"GO:0061464"}


id: MOD:01254
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(2)H labeled dimethylated L-lysine.","definition_xrefs":["OMSSA:189","PubMed:14670044","Unimod:199#K"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N6,N6-dimethyl-L-lysine","termid":"MOD:00084"},{"relation_name":"is_a","term_name":"4x(2)H labeled dimethylated residue","termid":"MOD:00552"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(2)H labeled dimethylated L-lysine","synonyms":[{"name":"DiMethyl-CHD2","type":"related"},{"name":"Dimethyl:2H(4)","type":"related"},{"name":"mod189","type":"exact"}],"termid":"MOD:01254"}


id: PBO:0045841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 31","termid":"PBO:0045841"}


id: PBO:0070265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U105C small nucleolar","termid":"PBO:0070265"}


id: PBO:0078859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 7","termid":"PBO:0078859"}


id: SO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_methyl_N6_threonylcarbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_methyl_N6_threonylcarbamoyladenosine","secondary_identifiers":["RNAMOD:013"],"synonyms":[{"name":"N6 methyl N6 threonylcarbamoyladenosine","type":"exact"},{"name":"N6-methyl-N6-threonylcarbamoyladenosine","type":"exact"},{"name":"m6t6A","type":"exact"}],"termid":"SO:0001307"}


id: PBO:0046675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended synaptotagmin 1","termid":"PBO:0046675"}


id: GO:0047187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deacetyl-[citrate-oxaloacetate-lyase ((pro-3S)-CH(2)COO(-)-acetate)] + S-acetylphosphopantetheine = [citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO(-)-acetate)] + pantetheine 4'-phosphate.","definition_xrefs":["MetaCyc:2.3.1.49-RXN","EC:2.3.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"deacetyl-[citrate-(pro-3S)-lyase] S-acetyltransferase activity","secondary_identifiers":["RHEA:20393"],"synonyms":[{"name":"S-acetyl phosphopantetheine:deacetyl citrate lyase S-acetyltransferase activity","type":"related"},{"name":"S-acetylphosphopantetheine:deacetyl-citrate-oxaloacetate-lyase((pro-3S)-CH2COO-rightacetate)S-acetyltransferase activity","type":"related"},{"name":"deacetyl-citrate-(pro-3S)-lyase S-acetyltransferase activity","type":"related"},{"name":"deacetyl-citrate-(pro-3S)-lyase acetyltransferase activity","type":"related"}],"termid":"GO:0047187"}


id: GO:0050269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coniferyl aldehyde + H2O + NAD(P)+ = ferulate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"coniferyl-aldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-1241"],"synonyms":[{"name":"coniferyl aldehyde:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0050269"}


id: PBO:0079728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 5 (pseudogene)","termid":"PBO:0079728"}


id: GO:0002583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen","synonyms":[{"name":"regulation of peptide antigen processing and presentation","type":"exact"}],"termid":"GO:0002583"}


id: PBO:0072360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 46","termid":"PBO:0072360"}


id: GO:0046841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trisporic acid, a carotenoic acid derivative used as a pheromone in some species of Zygomycota.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"trisporic acid metabolic process","synonyms":[{"name":"trisporic acid metabolism","type":"exact"}],"termid":"GO:0046841"}


id: GO:0140463
data:
  {"annotated_genes":["SJAG_03989","SJAG_04755","SJAG_02097","SJAG_01713","SJAG_01377","SJAG_00640","SJAG_04253","SJAG_04942","SJAG_04623","SJAG_00302","SJAG_02551","SJAG_04613","SJAG_01873","SJAG_00335","SJAG_03941","SJAG_03916","SJAG_03942","SJAG_04574","SJAG_04932","SJAG_02513","SJAG_04142","SJAG_00213","SJAG_00266","SJAG_01601","SJAG_01205","SJAG_03543"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84180,84298,85484,87893,88925,90052,95235,95830,98122,98123,98124,103801,104072,105417,107312,107583,107830,107831,108282,108721,108722,108723,109079,109335,110662,111388,113784,113792],"is_not":false,"summary":null,"term":"GO:0140463"},{"annotations":[87379,106592,95237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140566"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a protein or a protein complex with a nucleosome, to establish or maintain the chromatin localization of the protein, or protein complex.","definition_xrefs":["PMID:32277274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00213":null,"SJAG_00266":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00640":null,"SJAG_01205":null,"SJAG_01377":null,"SJAG_01601":null,"SJAG_01713":null,"SJAG_01873":null,"SJAG_02097":null,"SJAG_02513":null,"SJAG_02551":null,"SJAG_03543":null,"SJAG_03916":null,"SJAG_03941":null,"SJAG_03942":null,"SJAG_03989":null,"SJAG_04142":null,"SJAG_04253":null,"SJAG_04574":null,"SJAG_04613":null,"SJAG_04623":null,"SJAG_04755":null,"SJAG_04932":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"chromatin-protein adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromatin adaptor","type":"exact"},{"name":"chromatin adaptor activity","type":"exact"},{"name":"chromatin receptor","type":"exact"},{"name":"chromatin recruitment","type":"related"},{"name":"chromatin-protein adaptor","type":"exact"},{"name":"protein-chromatin adaptor activity","type":"exact"}],"termid":"GO:0140463","terms_by_termid":{"GO:0140463":null,"GO:0140566":null}}


id: GO:0033707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxymugineic acid + NAD(P)+ = 3''-deamino-3''-oxonicotianamine + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3''-deamino-3''-oxonicotianamine reductase activity","secondary_identifiers":["MetaCyc:1.1.1.285-RXN"],"synonyms":[{"name":"2'-deoxymugineic acid:NAD(P)+ 3''-oxidoreductase activity","type":"related"}],"termid":"GO:0033707"}


id: PBO:0078427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 4-1","termid":"PBO:0078427"}


id: PBO:0084090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) and ubiquitin receptor; involved in vesicle-mediated vacuolar transport, including Golgi-endosome trafficking and sorting through the multivesicular body (MVB); stimulates the intrinsic guanine nucleotide exchange activity of Rab family members (Vps21p/Ypt52p/Ypt53p); partially redundant with GEF MUK1; required for localization of the CORVET complex to endosomes; similar to mammalian ras inhibitors; contains a Ub-interacting CUE domain","termid":"PBO:0084090"}


id: PBO:0033768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_pole_body_duplication","termid":"PBO:0033768"}


id: PBO:0028990
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_splicing_at_cryptic_splice_sites","termid":"PBO:0028990"}


id: MOD:01012
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively oxidizes the disulfide bond of a cystine crosslink to form two cysteic acid residues.","definition_xrefs":["DeltaMass:335"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-cystine (cross-link)","termid":"MOD:00034"},{"relation_name":"is_a","term_name":"L-cysteic acid (L-cysteine sulfonic acid)","termid":"MOD:00460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidation of disulfide crosslink in cystine to two cysteic acids","termid":"MOD:01012"}


id: GO:0140988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ADP from one side of a membrane to the other according to the reaction: ADP(out) + phosphate(in) = ADP(in) + phosphate(out).","definition_xrefs":["PMID:15123600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP transmembrane transporter activity","termid":"GO:0015217"},{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ADP:phosphate antiporter activity","secondary_identifiers":["RHEA:65844"],"synonyms":[{"name":"ADP:inorganic phosphate antiporter activity","type":"exact"},{"name":"inorganic phosphate:ADP antiporter activity","type":"exact"}],"termid":"GO:0140988"}


id: PBO:0073587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shieldin complex subunit 2 pseudogene 3","termid":"PBO:0073587"}


id: PBO:0112847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 8-1","termid":"PBO:0112847"}


id: PBO:0065302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 12","termid":"PBO:0065302"}


id: PBO:0090145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex16 family peroxisome import protein Pex16","termid":"PBO:0090145"}


id: PBO:0062983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proton activated chloride channel 1","termid":"PBO:0062983"}


id: PBO:0077477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 199","termid":"PBO:0077477"}


id: GO:0070422
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the serine-threonine protein kinase Raf-1 with the beta and gamma subunits of a heterotrimeric G protein.","definition_xrefs":["PMID:7782277","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"G-protein beta/gamma-Raf-1 complex","synonyms":[{"name":"G protein complex (GNG2, GNB2L1, RAF1)","type":"related"}],"termid":"GO:0070422"}


id: PBO:0046017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 alpha kinase 3","termid":"PBO:0046017"}


id: GO:0002009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of epithelia are generated and organized. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube.","definition_xrefs":["GOC:jl","ISBN:0198506732","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"epithelium development","termid":"GO:0060429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelium","synonyms":[{"name":"epithelium morphogenesis","type":"exact"}],"termid":"GO:0002009"}


id: PBO:0073465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sideroflexin 1","termid":"PBO:0073465"}


id: PATO:0001120
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001120 relative momentum value (obsolete PATO:0001120)","termid":"PATO:0001120"}


id: FYPO:0004125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished histone H3-K4 dimethylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 dimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 dimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me2 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 dimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 dimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 dimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004125"}


id: GO:1904211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any membrane protein proteolysis that is involved in retrograde protein transport, ER to cytosol.","definition_xrefs":["PMID:22795130","GO_REF:0000060","GOC:PARL","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein proteolysis","termid":"GO:0033619"},{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"},{"relation_name":"part_of","term_name":"retrograde protein transport, ER to cytosol","termid":"GO:0030970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163","GO:0006810"],"is_obsolete":false,"name":"membrane protein proteolysis involved in retrograde protein transport, ER to cytosol","synonyms":[{"name":"intramembrane cleavage of ERAD substrate","type":"broad"},{"name":"intramembrane proteolysis involved in ERAD","type":"exact"},{"name":"membrane protein proteolysis involved in protein dislocation from ER","type":"exact"},{"name":"membrane protein proteolysis involved in protein retrotranslocation, ER to cytosol","type":"exact"},{"name":"membrane protein proteolysis involved in retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:1904211"}


id: PBO:0080868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YJU2 splicing factor homolog","termid":"PBO:0080868"}


id: GO:1905741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mitochondrial calcium release that is involved in positive regulation of presynaptic cytosolic calcium concentration.","definition_xrefs":["GO_REF:0000060","PMID:26644474","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"calcium export from the mitochondrion","termid":"GO:0099093"},{"relation_name":"part_of","term_name":"positive regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"calcium export from the mitochondrion involved in positive regulation of presynaptic cytosolic calcium concentration","synonyms":[{"name":"calcium ion transmembrane export from mitochondrion involved in positive regulation of presynaptic cytosolic calcium concentration","type":"exact"},{"name":"mitochondrial calcium release involved in positive regulation of presynaptic cytosolic calcium concentration","type":"exact"}],"termid":"GO:1905741"}


id: PBO:0069614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 891, pseudogene","termid":"PBO:0069614"}


id: GO:0018255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of S-(peptidyl-glycyl)-peptidyl-cysteine cross-links by the formation of a thiolester between cysteine and the carboxy-terminal glycine of ubiquitin and other proteins.","definition_xrefs":["GOC:jh2","RESID:AA0206"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-glycyl-L-cysteine (obsolete GO:0018255)","termid":"GO:0018255"}


id: FYPO:0008260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is decreased, and the localizatiion to the endoplasmic reticulum is increased. The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PMID:22848669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell surface","termid":"FYPO:0008258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cell surface, protein mislocalized to endoplasmic reticulum","termid":"FYPO:0008260"}


id: PBO:0071327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 4","termid":"PBO:0071327"}


id: GO:0006698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent or conformational alteration of ecdysone, resulting in a change in its properties.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ecdysone modification (obsolete GO:0006698)","synonyms":[{"name":"ecdysone modification","type":"exact"}],"termid":"GO:0006698"}


id: PBO:0057537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 653","termid":"PBO:0057537"}


id: PBO:0035753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_deactivation_of_mitotic_spindle_assembly_checkpoint","termid":"PBO:0035753"}


id: FYPO:0007771
data:
  {"alleles_by_uniquename":{"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115302],"is_not":false,"summary":null,"term":"FYPO:0007771"}],"single_locus_phenotype":[{"annotations":[115277,115278,115284,115285,115287,115288,115301,115303,115304,115305,115306,115307,115308],"is_not":false,"summary":null,"term":"FYPO:0007771"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein is abnormally localized to one or more large clusters in the nuclear envelope. The protein may normally be distributed evenly in the nuclear envelope.","definition_xrefs":["PomBase:mah","PMID:32109380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear envelope during vegetative growth","termid":"FYPO:0004885"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":7,"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q aa)","display_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-2","expression":"Not assayed or wild type"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cmp7delta vps4-ts(I307T L327S aa)","display_uniquename":"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"did4delta":{"display_name":"did4delta","display_uniquename":"did4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04489:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_05207"],"name":"abnormally clustered protein localization to nuclear envelope","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_05207","SJAG_04489","SJAG_03783","SJAG_03892"],"single_locus_genotype_uniquenames":["Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta","did4delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta","vps24delta"],"synonyms":[{"name":"abnormal protein localization to nuclear envelope, with protein in large clusters","type":"exact"},{"name":"abnormally clustered protein localisation to nuclear envelope","type":"exact"},{"name":"abnormally clustered protein localization to nuclear envelope during mitotic cell cycle","type":"related"},{"name":"abnormally clustered protein localization to nuclear envelope during vegetative growth","type":"exact"},{"name":"abnormally clustered protein localization to nuclear membrane","type":"related"}],"termid":"FYPO:0007771","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0039138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adherens junctions associated protein 1","termid":"PBO:0039138"}


id: PBO:0003951
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of APC complex","termid":"PBO:0003951"}


id: FYPO:0002179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which a microcolony forms, all cells in the population are inviable and have abnormal morphology (i.e. size, shape, or structure), some cells may divide, and some cells are longer than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population, vegetative cells with abnormal morphology, including long cells (obsolete FYPO:0002179)","synonyms":[{"name":"inviable microcolony of vegetative cells with abnormal morphology, including long cells","type":"exact"}],"termid":"FYPO:0002179"}


id: PBO:0048757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ganglioside GM2 activator","termid":"PBO:0048757"}


id: PBO:0041766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 6","termid":"PBO:0041766"}


id: PBO:0077449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 182","termid":"PBO:0077449"}


id: PBO:0084486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific prospore membrane protein; required to produce bending force necessary for proper assembly of the prospore membrane during sporulation","termid":"PBO:0084486"}


id: GO:0042029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of 14-Ala-Leu-15 in insulin B chain and cleavage of 413-Lys-Leu-414 in alpha chain of fibrinogen.","definition_xrefs":["PMID:7725320"],"gene_count":0,"genotype_count":0,"name":"obsolete fibrolase activity (obsolete GO:0042029)","synonyms":[{"name":"Agkistrodon contortrix contortrix metalloproteinase activity","type":"narrow"},{"name":"Agkistrodon contortrix contortrix venom metalloproteinase activity","type":"narrow"},{"name":"fibrinolytic proteinase activity","type":"related"},{"name":"fibrolase activity","type":"exact"}],"termid":"GO:0042029"}


id: PR:O74511
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase 6 regulatory subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extragenic suppressor of kinetochore protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.01c","secondary_identifiers":["UniProtKB:O74511"],"synonyms":[{"name":"Spom972h-PPP6R3","type":"exact"}],"termid":"PR:O74511"}


id: GO:0086052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an SA node cardiac muscle cell membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"part_of","term_name":"SA node cell action potential","termid":"GO:0086015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane repolarization during SA node cell action potential","synonyms":[{"name":"membrane repolarization involved in regulation of SA node cardiac muscle cell action potential","type":"exact"},{"name":"membrane repolarization involved in regulation of SAN cardiac muscle cell action potential","type":"exact"},{"name":"membrane repolarization involved in regulation of sinoatrial node cardiac muscle cell action potential","type":"exact"},{"name":"membrane repolarization involved in regulation of sinus node cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:0086052"}


id: FYPO:0003449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G1/S phase transition, under conditions where arrest is not a normal occurrence.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with unreplicated DNA","termid":"FYPO:0001430"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic G1 phase","termid":"FYPO:0005097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G1/S phase transition","secondary_identifiers":["FYPO:0000395"],"synonyms":[{"name":"abnormal cell cycle arrest at G1/S phase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G1/S phase transition during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest with unreplicated DNA at mitotic G1/S phase transition","type":"exact"},{"name":"abnormal mitotic G1/S phase arrest","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at G1/S phase transition","type":"exact"},{"name":"abolished mitotic G1/S phase transition","type":"related"},{"name":"cell cycle arrest at mitotic G1/S phase transition","type":"exact"},{"name":"cell cycle progression through the G1/S phase transition: arrested","type":"related"}],"termid":"FYPO:0003449"}


id: PBO:0016919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug15","termid":"PBO:0016919"}


id: GO:0046345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid metabolic process","termid":"GO:0009687"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"apocarotenoid catabolic process","termid":"GO:0043290"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"abscisic acid catabolic process","synonyms":[{"name":"abscisic acid breakdown","type":"exact"},{"name":"abscisic acid catabolism","type":"exact"},{"name":"abscisic acid degradation","type":"exact"}],"termid":"GO:0046345"}


id: PBO:0058278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4655","termid":"PBO:0058278"}


id: GO:0034692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that comprises three core spliceosomal proteins, designated E, F, and G. Formation of the E.F.G complex is essential but not sufficient for the formation of a stable U1 snRNP complex.","definition_xrefs":["PMID:8641291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"E.F.G complex","termid":"GO:0034692"}


id: GO:1901117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cephamycin C.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"cephamycin C metabolic process","termid":"GO:1901116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"cephamycin C catabolic process","synonyms":[{"name":"cephamycin C breakdown","type":"exact"},{"name":"cephamycin C catabolism","type":"exact"},{"name":"cephamycin C degradation","type":"exact"}],"termid":"GO:1901117"}


id: PBO:0090074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding splicing factor Ntr1","termid":"PBO:0090074"}


id: PBO:0046334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENOX2 antisense RNA 1","termid":"PBO:0046334"}


id: SO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from apicoplast sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"apicoplast_sequence","termid":"SO:0000743"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apicoplast_gene","synonyms":[{"name":"apicoplast gene","type":"exact"}],"termid":"SO:0000091"}


id: PBO:0029693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_iron_level","termid":"PBO:0029693"}


id: GO:0039687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral DNA replication process where only one strand is replicated at once, and which releases a single stranded DNA (ssDNA).","definition_xrefs":["GOC:bf","VZ:1940","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome replication","termid":"GO:0039693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"viral DNA strand displacement replication","termid":"GO:0039687"}


id: GO:1901665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of NAD+ ADP-ribosyltransferase activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of NAD+ ADP-ribosyltransferase activity","termid":"GO:1901664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of NAD+ ADP-ribosyltransferase activity","synonyms":[{"name":"down regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"down regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"down regulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"down regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"down regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"down regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"down regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"down regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"down-regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"down-regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"down-regulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"down-regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"down-regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"down-regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"down-regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"down-regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"downregulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"downregulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"downregulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"downregulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"downregulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"downregulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"downregulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"downregulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"inhibition of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"inhibition of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"inhibition of NAD+ ADP-ribosyltransferase activity","type":"narrow"},{"name":"inhibition of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"inhibition of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"inhibition of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"inhibition of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"inhibition of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"negative regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"negative regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"negative regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"negative regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"negative regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"negative regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"negative regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"}],"termid":"GO:1901665"}


id: FYPO:0002027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms an actomyosin contractile ring that is not perpendicular to the long axis of the cell.","definition_xrefs":["PomBase:mah","PMID:8834798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized actomyosin contractile ring","termid":"FYPO:0001369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0004803","FYPO:0000002","FYPO:0000032","FYPO:0000138","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"angled actomyosin contractile ring","synonyms":[{"name":"actomyosin contractile ring not orthogonal to long axis of cell","type":"exact"},{"name":"actomyosin contractile ring not perpendicular to long axis of cell","type":"related"},{"name":"angled actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"angled actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"angled cytokinetic contractile ring","type":"exact"},{"name":"angled mitotic contractile ring","type":"exact"},{"name":"tilted actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0002027"}


id: PBO:0051402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 2, pseudogene","termid":"PBO:0051402"}


id: PBO:0036509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent reductase for Dph3, Cbr1 (predicted)","termid":"PBO:0036509"}


id: FYPO:0002399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton","termid":"FYPO:0002397"},{"relation_name":"output_of","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton","synonyms":[{"name":"abnormal microtubule cytoskeleton physical object quality","type":"exact"},{"name":"disorganized microtubule cytoskeleton","type":"related"}],"termid":"FYPO:0002399"}


id: GO:0008025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The diazepam binding inhibitor is a 10kDa 86-residue polypeptide that acts as an endogenous ligand for a mitochondrial receptor (formerly regarded as a peripheral benzodiazepine binding site) in steroidogenic cells and regulates stimulation of steroidogenesis by tropic hormones. It also binds to the GABA-A receptor and modulates glucose-dependent insulin secretion and synthesis of acyl-CoA esters.","definition_xrefs":["PMID:11883709","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete diazepam binding inhibitor activity (obsolete GO:0008025)","synonyms":[{"name":"DBI","type":"exact"},{"name":"diazepam binding inhibitor activity","type":"exact"},{"name":"diazepam-binding inhibitor activity","type":"exact"}],"termid":"GO:0008025"}


id: GO:0000500
data:
  {"annotated_genes":["SJAG_02747","SJAG_05331","SJAG_04766","SJAG_04083"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89263,91512,101354,112543],"is_not":false,"summary":null,"term":"GO:0000500"}]},"cv_name":"cellular_component","definition":"A complex required for the transcription of rDNA by RNA polymerase I. In yeast the complex consists of Rrrn5p, Rrn9p, Rrn10p, histones H3 and H4, and Uaf30p.","definition_xrefs":["PMID:11500378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulator complex","termid":"GO:0000120"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02747":null,"SJAG_04083":null,"SJAG_04766":null,"SJAG_05331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005730","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase I upstream activating factor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase I upstream activation factor complex","type":"exact"},{"name":"UAF","type":"exact"}],"termid":"GO:0000500","terms_by_termid":{"GO:0000500":null}}


id: FYPO:0004396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which mitotic spindle elongation, i.e. the process of lengthening the distance between poles of the mitotic spindle, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic spindle elongation","synonyms":[{"name":"normal mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"normal spindle elongation during mitosis","type":"exact"},{"name":"normal spindle elongation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004396"}


id: GO:0045427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient guanylylation of peptidyl-histidine to form (phospho-5'-guanosine)-L-histidine.","definition_xrefs":["RESID:AA0325"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via (phospho-5'-guanosine)-L-histidine (obsolete GO:0045427)","termid":"GO:0045427"}


id: PBO:0029013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_chromosome_during_vegetative_growth","termid":"PBO:0029013"}


id: PBO:0088464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER UDP-N-acetylglucosamine transmembrane transporter","termid":"PBO:0088464"}


id: GO:1903488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lactation.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:19563620","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lactation","termid":"GO:1903487"},{"relation_name":"negatively_regulates","term_name":"lactation","termid":"GO:0007595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lactation","synonyms":[{"name":"down regulation of lactation","type":"exact"},{"name":"down-regulation of lactation","type":"exact"},{"name":"downregulation of lactation","type":"exact"},{"name":"inhibition of lactation","type":"narrow"}],"termid":"GO:1903488"}


id: GO:0102047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + glycine + ATP(4-) = H+ + indole-3-acetyl-glycine + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz","PMID:15659623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indole-3-acetyl-glycine synthetase activity","secondary_identifiers":["MetaCyc:RXN-10429"],"termid":"GO:0102047"}


id: PBO:0027979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0027979"}


id: PBO:0028744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0028744"}


id: PBO:0051104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-17 (pseudogene)","termid":"PBO:0051104"}


id: PR:P0CT80
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2802 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S28-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.15c","synonyms":[{"name":"S33 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps2802","type":"exact"}],"termid":"PR:P0CT80"}


id: GO:0003183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the mitral valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve morphogenesis","termid":"GO:0003181"},{"relation_name":"part_of","term_name":"mitral valve development","termid":"GO:0003174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitral valve morphogenesis","termid":"GO:0003183"}


id: PBO:0086207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with the INO80 chromatin remodeling complex; associates with the INO80 complex under low-salt conditions; essential for growth under anaerobic conditions; protein abundance increases in response to DNA replication stress","termid":"PBO:0086207"}


id: GO:1903171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of carbon dioxide within an organism or cell.","definition_xrefs":["GOC:TermGenie","GOC:mr","GO_REF:0000072","PMID:16571594"],"gene_count":0,"genotype_count":0,"name":"obsolete carbon dioxide homeostasis (obsolete GO:1903171)","termid":"GO:1903171"}


id: GO:1904339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dopaminergic neuron differentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15522889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of dopaminergic neuron differentiation","termid":"GO:1904338"},{"relation_name":"negatively_regulates","term_name":"dopaminergic neuron differentiation","termid":"GO:0071542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dopaminergic neuron differentiation","synonyms":[{"name":"down regulation of dopaminergic neuron differentiation","type":"exact"},{"name":"down-regulation of dopaminergic neuron differentiation","type":"exact"},{"name":"downregulation of dopaminergic neuron differentiation","type":"exact"},{"name":"inhibition of dopaminergic neuron differentiation","type":"narrow"}],"termid":"GO:1904339"}


id: GO:0006942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle contraction","termid":"GO:0006937"},{"relation_name":"regulates","term_name":"striated muscle contraction","termid":"GO:0006941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle contraction","termid":"GO:0006942"}


id: PBO:0055315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2743","termid":"PBO:0055315"}


id: PR:Q9USU7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hmo1 gene.","definition_xrefs":["UniProtKB:Q9USU7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box-containing protein C28F2.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.11","synonyms":[{"name":"Spom972h-hmo1","type":"exact"}],"termid":"PR:Q9USU7"}


id: PBO:0057644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1236","termid":"PBO:0057644"}


id: GO:0008826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfinoalanine = L-alanine + sulfite.","definition_xrefs":["RHEA:28278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"cysteine sulfinate desulfinase activity","secondary_identifiers":["MetaCyc:RXN0-279"],"synonyms":[{"name":"cysteine sulphinate desulphinase activity","type":"exact"}],"termid":"GO:0008826"}


id: PBO:0067478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 610, pseudogene","termid":"PBO:0067478"}


id: PBO:0085579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 5.8S rRNA processing; Ccr4p-like RNase required for correct 3'-end formation of 5.8S rRNA at site E; similar to Ngl1p; NGL2 has a paralog, NGL3, that arose from the whole genome duplication","termid":"PBO:0085579"}


id: GO:0015608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + carbohydrate(out) -> ADP + phosphate + carbohydrate(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"carbohydrate-importing ABC transporter activity","secondary_identifiers":["TC:3.A.1.1.1"],"synonyms":[{"name":"carbohydrate uptake transporter activity","type":"exact"},{"name":"carbohydrate-importing ATPase activity","type":"broad"},{"name":"sugar transporter","type":"narrow"}],"termid":"GO:0015608"}


id: GO:1902845
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98476],"is_not":false,"summary":null,"term":"GO:1902845"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic spindle elongation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation","termid":"GO:0032888"},{"relation_name":"negatively_regulates","term_name":"mitotic spindle elongation","termid":"GO:0000022"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mitotic spindle elongation","type":"exact"},{"name":"down regulation of spindle elongation during mitosis","type":"exact"},{"name":"down-regulation of mitotic spindle elongation","type":"exact"},{"name":"down-regulation of spindle elongation during mitosis","type":"exact"},{"name":"downregulation of mitotic spindle elongation","type":"exact"},{"name":"downregulation of spindle elongation during mitosis","type":"exact"},{"name":"inhibition of mitotic spindle elongation","type":"narrow"},{"name":"inhibition of spindle elongation during mitosis","type":"narrow"},{"name":"negative regulation of spindle elongation during mitosis","type":"exact"}],"termid":"GO:1902845","terms_by_termid":{"GO:1902845":null}}


id: GO:0052457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the production of nitric oxide as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont nitric oxide production (obsolete GO:0052457)","synonyms":[{"name":"modulation by organism of defense-related symbiont NO production","type":"exact"},{"name":"modulation by organism of defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052457"}


id: GO:0009655
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigment-protein complex primarily associated to PSII in higher plants, green algae and cyanobacteria that directly transfers electrons to the reaction center.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"PSII associated light-harvesting complex II","termid":"GO:0009517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II, core complex","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIIa subcomplex","type":"narrow"},{"name":"PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex","type":"narrow"},{"name":"PSII associated light-harvesting complex II, core complex, LHCIId subcomplex","type":"narrow"}],"termid":"GO:0009655"}


id: GO:0098658
data:
  {"annotated_genes":["SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"}]},"cv_name":"biological_process","definition":"The directed movement of inorganic anions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"},{"relation_name":"is_a","term_name":"inorganic ion import across plasma membrane","termid":"GO:0099587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"inorganic anion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inorganic anion import into cell","type":"exact"}],"termid":"GO:0098658","terms_by_termid":{"GO:1902434":null}}


id: PBO:0081099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 24","termid":"PBO:0081099"}


id: GO:0023005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a neurotransmitter signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by neurotransmitter (obsolete GO:0023005)","synonyms":[{"name":"signal initiation by neurotransmitter","type":"exact"}],"termid":"GO:0023005"}


id: FYPO:0007013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5S ribosomal RNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rRNA or precursor level","termid":"FYPO:0006000"},{"relation_name":"is_a","term_name":"normal mature ncRNA level","termid":"FYPO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal mature 5S rRNA level","synonyms":[{"name":"normal 5S rRNA level","type":"broad"},{"name":"normal mature 5S rRNA accumulation","type":"related"},{"name":"normal mature 5S rRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature 5S rRNA level during vegetative growth","type":"exact"},{"name":"normal mature 5S rRNA transcript level","type":"exact"}],"termid":"FYPO:0007013"}


id: GO:0006314
data:
  {"annotated_genes":["SJAG_MIT07","SJAG_MIT06","SJAG_MIT05"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115093,115094,115101,115102],"is_not":false,"summary":null,"term":"GO:0006314"}]},"cv_name":"biological_process","definition":"Lateral transfer of an intron to a homologous allele that lacks the intron, mediated by a site-specific endonuclease encoded within the mobile intron.","definition_xrefs":["PMID:10487208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":3,"genes_by_uniquename":{"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"intron homing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006314","terms_by_termid":{"GO:0006314":null}}


id: GO:0032410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of a transporter.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transporter activity","termid":"GO:0032409"},{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of transporter activity","synonyms":[{"name":"down regulation of transporter activity","type":"exact"},{"name":"down-regulation of transporter activity","type":"exact"},{"name":"downregulation of transporter activity","type":"exact"},{"name":"inhibition of transporter activity","type":"narrow"}],"termid":"GO:0032410"}


id: GO:0010222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vascular tissue pattern formation as it occurs in the stem of vascular plants.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem and phloem pattern formation","termid":"GO:0010051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem vascular tissue pattern formation","termid":"GO:0010222"}


id: PR:O13950
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A signal recognition particle receptor subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR19326:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.07c","secondary_identifiers":["UniProtKB:O13950"],"synonyms":[{"name":"SPAC23H4.07c","type":"related"},{"name":"SR-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SRPRB","type":"exact"}],"termid":"PR:O13950"}


id: GO:0019656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the enzymatic breakdown of D-glucose to D-lactate and ethanol, yielding energy in the form of adenosine triphosphate (ATP) at the rate of one ATP per glucose molecule.","definition_xrefs":["GOC:jl","MetaCyc:P122-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"glucose catabolic process to lactate","termid":"GO:0019659"},{"relation_name":"is_a","term_name":"non-glycolytic fermentation","termid":"GO:0019662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"glucose catabolic process to D-lactate and ethanol","synonyms":[{"name":"glucose fermentation to D-lactate and ethanol","type":"exact"},{"name":"heterofermentation","type":"exact"},{"name":"heterofermentative lactate fermentation","type":"exact"},{"name":"heterofermentative pathway","type":"exact"},{"name":"heterolactate fermentation","type":"exact"},{"name":"heterolactic fermentation","type":"exact"}],"termid":"GO:0019656"}


id: PBO:0000009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-dependent_on","termid":"PBO:0000009"}


id: PBO:0005384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chk1 protein kinase","termid":"PBO:0005384"}


id: GO:0016762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a beta-(1->4) bond in the backbone of a xyloglucan and transfers the xyloglucanyl segment on to O-4 of the non-reducing terminal glucose residue of an acceptor, which can be a xyloglucan or an oligosaccharide of xyloglucan.","definition_xrefs":["GOC:ask","PMID:1400418","PMID:1554366","EC:2.4.1.207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"xyloglucan:xyloglucosyl transferase activity","secondary_identifiers":["MetaCyc:2.4.1.207-RXN","GO:0080039"],"synonyms":[{"name":"endo-xyloglucan transferase activity","type":"related"},{"name":"endoxyloglucan transferase activity","type":"exact"},{"name":"xyloglucan endotransglucosylase activity","type":"related"},{"name":"xyloglucan:xyloglucan xyloglucanotransferase activity","type":"related"}],"termid":"GO:0016762"}


id: SO:0000259
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a glutamine anticodon, and a 3' glutamine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"glutamic_acid_tRNA_primary_transcript","termid":"SO:0000216"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminyl_tRNA","synonyms":[{"name":"glutaminyl tRNA","type":"exact"},{"name":"glutaminyl-transfer RNA","type":"exact"},{"name":"glutaminyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000259"}


id: CHEBI:15996
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A purine ribonucleoside 5'-triphosphate that has formula C10H16N5O14P3.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP","termid":"CHEBI:15996"}


id: GO:0007567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive process in which the parent is separated from its offspring either by giving birth to live young or by laying eggs.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-organism reproductive process","termid":"GO:0044703"},{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parturition","synonyms":[{"name":"egg laying","type":"narrow"},{"name":"giving birth","type":"exact"}],"termid":"GO:0007567"}


id: PBO:0036211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-two_Mei2_nuclear_dots_present_in_cell","termid":"PBO:0036211"}


id: GO:0071242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ammonium stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23509267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ammonium ion","termid":"GO:0060359"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ammonium ion","secondary_identifiers":["GO:1903718"],"synonyms":[{"name":"cellular response to ammonia","type":"exact"}],"termid":"GO:0071242"}


id: PBO:0031124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_antioxidant","termid":"PBO:0031124"}


id: PBO:0065266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 27","termid":"PBO:0065266"}


id: PBO:0002402
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.145","termid":"PBO:0002402"}


id: GO:0060143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060142"},{"relation_name":"positively_regulates","term_name":"syncytium formation by plasma membrane fusion","termid":"GO:0000768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060143"}


id: PBO:0072000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 2","termid":"PBO:0072000"}


id: PBO:0000427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z4","termid":"PBO:0000427"}


id: PBO:0058453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5092","termid":"PBO:0058453"}


id: GO:0008899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homoserine + succinyl-CoA = O-succinyl-L-homoserine + CoA.","definition_xrefs":["RHEA:22008","EC:2.3.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-succinyltransferase activity","termid":"GO:0016750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"homoserine O-succinyltransferase activity","secondary_identifiers":["MetaCyc:HOMSUCTRAN-RXN","KEGG_REACTION:R01777"],"synonyms":[{"name":"homoserine O-transsuccinylase activity","type":"broad"},{"name":"homoserine succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:L-homoserine O-succinyltransferase activity","type":"related"}],"termid":"GO:0008899"}


id: PATO:0000766
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000766 relative consumption value (obsolete PATO:0000766)","termid":"PATO:0000766"}


id: PBO:0040785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed X-linked 2","termid":"PBO:0040785"}


id: PBO:0004312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase complex catalytic subunit Naa30 (predicted)","termid":"PBO:0004312"}


id: GO:0042919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"benzoate transport","termid":"GO:0042919"}


id: PBO:0001268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein Mzt1 (predicted)","termid":"PBO:0001268"}


id: PR:O94626
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An oligoribonuclease, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11046:SF0","OMA:SCHPO03979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligoribonuclease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.07","secondary_identifiers":["UniProtKB:O94626"],"synonyms":[{"name":"Spom972h-REXO2","type":"exact"}],"termid":"PR:O94626"}


id: PBO:0075558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm equatorial segment protein 1","termid":"PBO:0075558"}


id: FYPO:0002504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification","termid":"FYPO:0002497"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation","termid":"FYPO:0002503"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein palmitoylation","synonyms":[{"name":"protein palmitoylation abolished","type":"exact"},{"name":"protein palmitoylation absent","type":"exact"}],"termid":"FYPO:0002504"}


id: PBO:0109088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 2","termid":"PBO:0109088"}


id: PBO:0086269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein translocase and chaperone required for Complex III assembly; member of the AAA ATPase family; forms a homo-oligomeric complex in the mitochondrial inner membrane that translocates the C-terminal domain of Rip1p from the matrix across the inner membrane and delivers it to an assembly intermediate of respiratory Complex III; also required for assembly of the Qcr10p subunit; mutation is functionally complemented by human homolog BCS1L, linked to neonatal diseases","termid":"PBO:0086269"}


id: PBO:0112182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional GLNase (glutamine amidotransferase)/CPSase (carbamoylphosphate synthetase)/ATCase (aspartate transcarbamoylase) Ura1","termid":"PBO:0112182"}


id: PBO:0015223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II alpha subunit Gls2","termid":"PBO:0015223"}


id: PBO:0031882
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by human MUTYH","termid":"PBO:0031882"}


id: GO:0032284
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A biotin carboxylase complex located in the stroma of a plastid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid biotin carboxylase complex (obsolete GO:0032284)","termid":"GO:0032284"}


id: GO:1900248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translational elongation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational elongation","termid":"GO:0045900"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational elongation","termid":"GO:1900247"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translation","termid":"GO:2000766"},{"relation_name":"negatively_regulates","term_name":"cytoplasmic translational elongation","termid":"GO:0002182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"negatively_regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0002181","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytoplasmic translational elongation","synonyms":[{"name":"down regulation of cytoplasmic translational elongation","type":"exact"},{"name":"down-regulation of cytoplasmic translational elongation","type":"exact"},{"name":"downregulation of cytoplasmic translational elongation","type":"exact"},{"name":"inhibition of cytoplasmic translational elongation","type":"narrow"}],"termid":"GO:1900248"}


id: PBO:0053667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 845","termid":"PBO:0053667"}


id: GO:0031737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CX3C chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CX3C chemokine receptor binding","synonyms":[{"name":"CX3C chemokine receptor ligand","type":"narrow"},{"name":"fractalkine receptor binding","type":"exact"}],"termid":"GO:0031737"}


id: GO:0072158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a proximal tubule are generated and organized. The proximal tubule is a nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle. It has a brush border epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"part_of","term_name":"proximal tubule development","termid":"GO:0072014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal tubule morphogenesis","termid":"GO:0072158"}


id: GO:0090163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the polarity of an epithelial cell along the plane of the epithelial tissue.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of epithelial cell polarity","termid":"GO:0090162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of epithelial cell planar polarity","termid":"GO:0090163"}


id: SO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A retrotransposon flanked by long terminal repeat sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrotransposon","termid":"SO:0000180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTR_retrotransposon","synonyms":[{"name":"LTR retrotransposon","type":"exact"},{"name":"long terminal repeat retrotransposon","type":"exact"}],"termid":"SO:0000186"}


id: PATO:0002152
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards from the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splayed","termid":"PATO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed lateral","termid":"PATO:0002152"}


id: GO:0051121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hepoxilins, a class of bioactive icosanoids with roles in the regulation of cell physiology.","definition_xrefs":["PMID:15123652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"hepoxilin metabolic process","synonyms":[{"name":"hepoxilin metabolism","type":"exact"}],"termid":"GO:0051121"}


id: PBO:0085455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potassium transporter that mediates K+ influx; activates high-affinity Ca2+ influx system (HACS) during mating pheromone response; expression up-regulated in response to alpha factor; localized to sites of polarized growth; member of a fungal-specific gene family; potential Cdc28p substrate; KCH1 has a paralog, PRM6, that arose from the whole genome duplication","termid":"PBO:0085455"}


id: PBO:0066806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 105","termid":"PBO:0066806"}


id: PBO:0079601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 E4 pseudogene","termid":"PBO:0079601"}


id: PBO:0045027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease","termid":"PBO:0045027"}


id: GO:0010108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which a glutamine stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of glutamine (obsolete GO:0010108)","synonyms":[{"name":"glutamine detection","type":"exact"},{"name":"glutamine perception","type":"related"},{"name":"glutamine sensing","type":"related"}],"termid":"GO:0010108"}


id: PBO:0055922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A10, pseudogene","termid":"PBO:0055922"}


id: GO:0030801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclic nucleotide metabolic process (obsolete GO:0030801)","synonyms":[{"name":"activation of cyclic nucleotide metabolic process","type":"narrow"},{"name":"positive regulation of cyclic nucleotide metabolism","type":"exact"},{"name":"stimulation of cyclic nucleotide metabolic process","type":"narrow"},{"name":"up regulation of cyclic nucleotide metabolic process","type":"exact"},{"name":"up-regulation of cyclic nucleotide metabolic process","type":"exact"},{"name":"upregulation of cyclic nucleotide metabolic process","type":"exact"}],"termid":"GO:0030801"}


id: PBO:0061839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid growth factor receptor pseudogene 1","termid":"PBO:0061839"}


id: PBO:0066697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required for meiotic nuclear division 1 homolog","termid":"PBO:0066697"}


id: PR:Q9USX1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A puromycin-sensitive aminopeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03268","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.05","secondary_identifiers":["UniProtKB:Q9USX1"],"synonyms":[{"name":"Spom972h-NPEPPS","type":"exact"},{"name":"aminopeptidase I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USX1"}


id: PR:G2TRR7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13G1.16 gene.","definition_xrefs":["UniProtKB:G2TRR7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G1.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.16","synonyms":[{"name":"Spom972h-SPBC13G1.16","type":"exact"}],"termid":"PR:G2TRR7"}


id: PBO:0111765
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat","termid":"PBO:0111765"}


id: GO:0102379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: steviolbioside + UDP-alpha-D-glucose = stevioside + UDP.","definition_xrefs":["RHEA:61744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"steviolbioside glucosyltransferase activity (stevioside forming)","secondary_identifiers":["MetaCyc:RXN-13514"],"termid":"GO:0102379"}


id: GO:1901686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutathione derivative.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"},{"relation_name":"is_a","term_name":"glutathione derivative metabolic process","termid":"GO:1901685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006790","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"glutathione derivative catabolic process","synonyms":[{"name":"glutathione derivative breakdown","type":"exact"},{"name":"glutathione derivative catabolism","type":"exact"},{"name":"glutathione derivative degradation","type":"exact"}],"termid":"GO:1901686"}


id: MOD:01138
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aedans Cystenyl","termid":"MOD:01138"}


id: PBO:0055337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2765","termid":"PBO:0055337"}


id: GO:0052431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the T-cell mediated immune response of a symbiont organism, where the two organisms are in a symbiotic interaction. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont T-cell mediated immune response (obsolete GO:0052431)","synonyms":[{"name":"modulation by organism of symbiont T-cell mediated immune response","type":"exact"}],"termid":"GO:0052431"}


id: GO:0031816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y6 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"P2Y6 nucleotide receptor binding","synonyms":[{"name":"P2Y6 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031816"}


id: PBO:0043274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 2 member D","termid":"PBO:0043274"}


id: GO:0035112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of genitalia are generated and organized. The genitalia are the organs of reproduction or generation, external and internal.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"genitalia development","termid":"GO:0048806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genitalia morphogenesis","synonyms":[{"name":"genital morphogenesis","type":"related"}],"termid":"GO:0035112"}


id: PBO:0056638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MED14 opposite strand","termid":"PBO:0056638"}


id: PBO:0057694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1283-2","termid":"PBO:0057694"}


id: GO:0051818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which an organism has a negative effect on the functioning of the second organism's cells, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption of cells of other organism involved in symbiotic interaction (obsolete GO:0051818)","synonyms":[{"name":"disruption of cells of other organism during symbiotic interaction","type":"related"}],"termid":"GO:0051818"}


id: GO:0017103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 1-phosphate + UTP = diphosphate + UDP-D-galactose.","definition_xrefs":["EC:2.7.7.10","RHEA:14209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTP-monosaccharide-1-phosphate uridylyltransferase activity","termid":"GO:0051748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"UTP:galactose-1-phosphate uridylyltransferase activity","secondary_identifiers":["GO:0003982","MetaCyc:UTPHEXPURIDYLYLTRANS-RXN","KEGG_REACTION:R00502"],"synonyms":[{"name":"Gal-1-P uridylyltransferase activity","type":"broad"},{"name":"UDPgalactose pyrophosphorylase activity","type":"related"},{"name":"UTP-hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UTP:alpha-D-hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UTP:hexose-1-phosphate uridylyltransferase activity","type":"broad"},{"name":"alpha-D-galactose 1-phosphate uridylyltransferase activity","type":"related"},{"name":"galactose 1-phosphate uridyltransferase activity","type":"related"},{"name":"galactose 1-phosphate uridylyltransferase activity","type":"related"},{"name":"galactose-1-phosphate uridylyltransferase activity","type":"broad"},{"name":"uridine diphosphate galactose pyrophosphorylase activity","type":"related"},{"name":"uridine diphosphogalactose pyrophosphorylase activity","type":"related"}],"termid":"GO:0017103"}


id: PBO:0040802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member e40","termid":"PBO:0040802"}


id: PBO:0028471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cytochrome_absorption_spectrum","termid":"PBO:0028471"}


id: PBO:0084658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mismatch repair protein; forms dimers with Msh2p that mediate repair of insertion or deletion mutations and removal of nonhomologous DNA ends, contains a PCNA (Pol30p) binding motif required for genome stability","termid":"PBO:0084658"}


id: PBO:0052953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinectin 1","termid":"PBO:0052953"}


id: FYPO:0002741
data:
  {"alleles_by_uniquename":{"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell executes a mitotic cell cycle process normally (i.e. indistinguishably from wild type). A mitotic cell cycle process is any of the processes that form part of the mitotic cell cycle, and thereby ensures successive accurate and complete genome replication and chromosome segregation.","definition_xrefs":["PomBase:mah","GO:1903047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle","termid":"FYPO:0000411"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04883":null},"genotype_count":1,"genotypes_by_uniquename":{"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic cell cycle process","references_by_uniquename":{"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_04883"],"single_locus_genotype_uniquenames":["ptp4delta"],"termid":"FYPO:0002741","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001007":null}}


id: SO:1000078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variation that decreases the rate a which transcription of the sequence occurs.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000078 sequence_variant_decreasing_rate_of_transcription (obsolete SO:1000078)","synonyms":[{"name":"mutation decreasing rate of transcription","type":"related"},{"name":"sequence variation decreasing rate of transcription","type":"exact"}],"termid":"SO:1000078"}


id: PBO:0030416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_duplication","termid":"PBO:0030416"}


id: GO:1900838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ergot alkaloid biosynthetic process","termid":"GO:1900823"},{"relation_name":"is_a","term_name":"regulation of fumigaclavine C biosynthetic process","termid":"GO:1900837"},{"relation_name":"negatively_regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"inhibition of fumigaclavine C biosynthetic process","type":"narrow"}],"termid":"GO:1900838"}


id: GO:0047513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + methyl-2-alpha-L-fucopyranosyl-beta-D-galactoside = L-fucose + methyl beta-D-galactoside.","definition_xrefs":["MetaCyc:12-ALPHA-L-FUCOSIDASE-RXN","EC:3.2.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-L-fucosidase activity","termid":"GO:0004560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1,2-alpha-L-fucosidase activity","secondary_identifiers":["RHEA:10816"],"synonyms":[{"name":"2-alpha-L-fucopyranosyl-beta-D-galactoside fucohydrolase activity","type":"related"},{"name":"almond emulsin fucosidase II activity","type":"narrow"},{"name":"almond emulsin fucosidase activity","type":"related"},{"name":"alpha-(1->2)-L-fucosidase activity","type":"related"}],"termid":"GO:0047513"}


id: GO:0018543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-amino-2-hydroxylamino-6-nitrotoluene + NADP+ = NADPH + H+ + 4-amino-2-nitroso-6-nitrotoluene.","definition_xrefs":["UM-BBD_reactionID:r0464"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-amino-2-nitroso-6-nitrotoluene reductase activity (obsolete GO:0018543)","termid":"GO:0018543"}


id: FYPO:0002078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to calcium during a cellular hypotonic response. Cells stop growing (and may die) at a concentration of calcium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to calcium","termid":"FYPO:0000098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to calcium during cellular hypotonic response","synonyms":[{"name":"hypersensitive to calcium during cellular hypotonic response","type":"exact"},{"name":"sensitive to calcium during cellular hypoosmotic response","type":"exact"},{"name":"sensitive to calcium during cellular hypotonic response during mitotic cell cycle","type":"related"},{"name":"sensitive to calcium during cellular hypotonic response during vegetative growth","type":"exact"},{"name":"sensitive to calcium ions during cellular hypotonic response","type":"exact"}],"termid":"FYPO:0002078"}


id: PBO:0048425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine amidotransferase class 1 domain containing 1","termid":"PBO:0048425"}


id: PR:O94544
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leukotriene A-4 hydrolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04625","PANTHER:PTHR11533:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene A-4 hydrolase homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.05c","secondary_identifiers":["UniProtKB:O94544"],"synonyms":[{"name":"LTA-4 hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LTA4H","type":"exact"},{"name":"leukotriene A(4) hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94544"}


id: GO:0005096
data:
  {"annotated_genes":["SJAG_00551","SJAG_02231","SJAG_04548","SJAG_03338","SJAG_03748","SJAG_00864","SJAG_02277","SJAG_02012","SJAG_03021","SJAG_02520","SJAG_03085","SJAG_00824","SJAG_05346","SJAG_02278","SJAG_04522","SJAG_04733","SJAG_00990","SJAG_04724","SJAG_00028","SJAG_04776","SJAG_04498","SJAG_04615","SJAG_01600","SJAG_04013","SJAG_03836","SJAG_00991","SJAG_01011","SJAG_03655","SJAG_02379","SJAG_04938","SJAG_00289","SJAG_03153","SJAG_01386","SJAG_02539","SJAG_04391","SJAG_01048","SJAG_04910","SJAG_04462","SJAG_02666","SJAG_01184","SJAG_04943","SJAG_02765","SJAG_04080","SJAG_00467","SJAG_01526","SJAG_04284","SJAG_03268","SJAG_02390","SJAG_00092","SJAG_04400","SJAG_04765","SJAG_01114","SJAG_04074"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64129,64999,69636,83673,84604,85349,87365,88937,89259,89260,89321,89417,89425,90077,90280,90281,91045,91052,91136,91524,91978,92209,92664,94147,94171,94944,94981,95768,96440,98555,101143,101252,101372,101429,101495,102560,102946,103141,103244,103496,103714,105519,105690,106205,106944,107053,107460,107551,108077,110343,111090,112136,112695,113219,113815],"is_not":false,"summary":null,"term":"GO:0005096"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"GTPase regulator activity","termid":"GO:0030695"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00092":null,"SJAG_00289":null,"SJAG_00467":null,"SJAG_00551":null,"SJAG_00824":null,"SJAG_00864":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01011":null,"SJAG_01048":null,"SJAG_01114":null,"SJAG_01184":null,"SJAG_01386":null,"SJAG_01526":null,"SJAG_01600":null,"SJAG_02012":null,"SJAG_02231":null,"SJAG_02277":null,"SJAG_02278":null,"SJAG_02379":null,"SJAG_02390":null,"SJAG_02520":null,"SJAG_02539":null,"SJAG_02666":null,"SJAG_02765":null,"SJAG_03021":null,"SJAG_03085":null,"SJAG_03153":null,"SJAG_03268":null,"SJAG_03338":null,"SJAG_03655":null,"SJAG_03748":null,"SJAG_03836":null,"SJAG_04013":null,"SJAG_04074":null,"SJAG_04080":null,"SJAG_04284":null,"SJAG_04391":null,"SJAG_04400":null,"SJAG_04462":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04548":null,"SJAG_04615":null,"SJAG_04724":null,"SJAG_04733":null,"SJAG_04765":null,"SJAG_04776":null,"SJAG_04910":null,"SJAG_04938":null,"SJAG_04943":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"GTPase activator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-416559","GO:0005097","GO:0005099","Reactome:R-HSA-8985594","Reactome:R-HSA-9018745","Reactome:R-HSA-428522","Reactome:R-HSA-9693282","Reactome:R-HSA-428533","Reactome:R-HSA-9013161","GO:0017123","Reactome:R-HSA-9013144","Reactome:R-HSA-8981637","GO:0030675","Reactome:R-HSA-9013022","GO:0008060","Reactome:R-HSA-9013437","Reactome:R-HSA-9013111","GO:0046582","Reactome:R-HSA-9017488","Reactome:R-HSA-9018806","Reactome:R-HSA-399935","GO:0005100","Reactome:R-HSA-416546","Reactome:R-HSA-9624893","GO:0005101","Reactome:R-HSA-4093339","Reactome:R-HSA-5638007","Reactome:R-HSA-9014295","Reactome:R-HSA-392513","Reactome:R-HSA-9014434","GO:0005098"],"synonyms":[{"name":"ARF GAP activity","type":"narrow"},{"name":"ARF GTPase activator activity","type":"narrow"},{"name":"GAP activity","type":"exact"},{"name":"Rab GAP activity","type":"narrow"},{"name":"Rab GTPase activator activity","type":"narrow"},{"name":"Rac GAP activity","type":"narrow"},{"name":"Rac GTPase activator activity","type":"narrow"},{"name":"Ral GAP activity","type":"narrow"},{"name":"Ral GTPase activator activity","type":"narrow"},{"name":"Ran GAP activity","type":"narrow"},{"name":"Ran GTPase activator activity","type":"narrow"},{"name":"RanGAP","type":"narrow"},{"name":"Rap GAP activity","type":"narrow"},{"name":"Rap GTPase activator activity","type":"narrow"},{"name":"Ras GAP activity","type":"narrow"},{"name":"Ras GTPase activator activity","type":"narrow"},{"name":"Rho GAP activity","type":"narrow"},{"name":"Rho GTPase activator activity","type":"narrow"},{"name":"Sar GAP activity","type":"narrow"},{"name":"Sar GTPase activator activity","type":"narrow"}],"termid":"GO:0005096","terms_by_termid":{"GO:0005096":null}}


id: GO:0004857
data:
  {"annotated_genes":["SJAG_02786","SJAG_02194","SJAG_01072","SJAG_04627","SJAG_01150","SJAG_00460","SJAG_04633","SJAG_04999","SJAG_01348","SJAG_04398","SJAG_02380","SJAG_01821","SJAG_01245","SJAG_04203","SJAG_00452","SJAG_02594","SJAG_03931","SJAG_03629","SJAG_01515","SJAG_02874","SJAG_04699","SJAG_04546","SJAG_04505","SJAG_03272","SJAG_03309","SJAG_02485","SJAG_01210","SJAG_01118"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105334,113078],"is_not":false,"summary":null,"term":"GO:0004857"},{"annotations":[96544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[104991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[99385,85531,112923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004866"},{"annotations":[84964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060698"},{"annotations":[112404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005095"},{"annotations":[93345,88298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990624"},{"annotations":[107267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008073"},{"annotations":[96068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030414"},{"annotations":[111408,103108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[85502,86398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[104504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"},{"annotations":[83992,95535,107471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"},{"annotations":[84965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008428"},{"annotations":[93194,91599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990846"},{"annotations":[89278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004867"},{"annotations":[91200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010521"},{"annotations":[94799,111643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990948"},{"annotations":[110721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055105"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of an enzyme.","definition_xrefs":["GOC:ai","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"},{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00460":null,"SJAG_01072":null,"SJAG_01118":null,"SJAG_01150":null,"SJAG_01210":null,"SJAG_01245":null,"SJAG_01348":null,"SJAG_01515":null,"SJAG_01821":null,"SJAG_02194":null,"SJAG_02380":null,"SJAG_02485":null,"SJAG_02594":null,"SJAG_02786":null,"SJAG_02874":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_03629":null,"SJAG_03931":null,"SJAG_04203":null,"SJAG_04398":null,"SJAG_04505":null,"SJAG_04546":null,"SJAG_04627":null,"SJAG_04633":null,"SJAG_04699":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140678","GO:0030234"],"is_obsolete":false,"name":"enzyme inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0048551"],"synonyms":[{"name":"metalloenzyme inhibitor activity","type":"narrow"}],"termid":"GO:0004857","terms_by_termid":{"GO:0004857":null,"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0004864":null,"GO:0004865":null,"GO:0004866":null,"GO:0004867":null,"GO:0005095":null,"GO:0008073":null,"GO:0008428":null,"GO:0010521":null,"GO:0030291":null,"GO:0030414":null,"GO:0055105":null,"GO:0060698":null,"GO:1990624":null,"GO:1990846":null,"GO:1990948":null}}


id: PBO:0078961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 2-4","termid":"PBO:0078961"}


id: PBO:0034224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_plesiomorphy_relationship_with","termid":"PBO:0034224"}


id: PBO:0051880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISY1 splicing factor homolog","termid":"PBO:0051880"}


id: GO:0042205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of chlorinated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with chlorine atoms.","definition_xrefs":["GOC:krc","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon metabolic process","termid":"GO:0042196"},{"relation_name":"is_a","term_name":"halogenated hydrocarbon catabolic process","termid":"GO:0042206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"chlorinated hydrocarbon catabolic process","synonyms":[{"name":"chlorinated hydrocarbon breakdown","type":"exact"},{"name":"chlorinated hydrocarbon catabolism","type":"exact"},{"name":"chlorinated hydrocarbon degradation","type":"exact"}],"termid":"GO:0042205"}


id: PBO:0084401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysine methyltransferase; involved in the dimethylation of eEF1A (Tef1p/Tef2p) at lysine 316; sequence similarity to S-adenosylmethionine-dependent methyltransferases of the seven beta-strand family; role in vesicular transport","termid":"PBO:0084401"}


id: PBO:0000583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron ion transporter (predicted)","termid":"PBO:0000583"}


id: PR:O13711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC14C4.04 gene.","definition_xrefs":["UniProtKB:O13711","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14C4.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.04","synonyms":[{"name":"Spom972h-SPAC14C4.04","type":"exact"}],"termid":"PR:O13711"}


id: PBO:0017640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sirtuin family histone deacetylase Hst4","termid":"PBO:0017640"}


id: PBO:0067598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 761, pseudogene","termid":"PBO:0067598"}


id: PBO:0042635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 10 pseudogene","termid":"PBO:0042635"}


id: GO:0044174
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to host cell lysosomes for degradation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endosome","synonyms":[{"name":"host endosome","type":"exact"}],"termid":"GO:0044174"}


id: PBO:0059769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 43","termid":"PBO:0059769"}


id: GO:0072361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glycolysis by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glycolytic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:0072361)","termid":"GO:0072361"}


id: PBO:0034524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_bundle_during_G0_to_G1_transition","termid":"PBO:0034524"}


id: PBO:0081453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 320","termid":"PBO:0081453"}


id: PBO:0059889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 12","termid":"PBO:0059889"}


id: PR:P87136
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A7.05 gene.","definition_xrefs":["UniProtKB:P87136","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C57A7.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.05","synonyms":[{"name":"Spom972h-SPAC57A7.05","type":"exact"}],"termid":"PR:P87136"}


id: PR:Q9Y738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein mis12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.04c","synonyms":[{"name":"NMS complex subunit mis12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mis12","type":"exact"}],"termid":"PR:Q9Y738"}


id: PBO:0041019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 2","termid":"PBO:0041019"}


id: SO:0001999
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA motif that is a component of a mating type region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"mating_type_region","termid":"SO:0001789"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating_type_region_motif","synonyms":[{"name":"mating type region motif","type":"exact"}],"termid":"SO:0001999"}


id: GO:0090685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A macromolecular localization process in which RNA is transported to and maintained in a location within the nucleus.","definition_xrefs":["PMID:26305931","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"RNA localization to nucleus","synonyms":[{"name":"RNA localisation to nucleus","type":"exact"}],"termid":"GO:0090685"}


id: GO:0046852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone remodeling.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tissue remodeling","termid":"GO:0034105"},{"relation_name":"is_a","term_name":"regulation of bone remodeling","termid":"GO:0046850"},{"relation_name":"positively_regulates","term_name":"bone remodeling","termid":"GO:0046849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone remodeling","synonyms":[{"name":"activation of bone remodeling","type":"narrow"},{"name":"positive regulation of bone remodelling","type":"exact"},{"name":"stimulation of bone remodeling","type":"narrow"},{"name":"up regulation of bone remodeling","type":"exact"},{"name":"up-regulation of bone remodeling","type":"exact"},{"name":"upregulation of bone remodeling","type":"exact"}],"termid":"GO:0046852"}


id: PATO:0000110
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000110 drought sensitivity (obsolete PATO:0000110)","termid":"PATO:0000110"}


id: FYECO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which oleate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ oleate","termid":"FYECO:0000320"}


id: GO:0060188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein desumoylation. Protein desumoylation is the process in which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein desumoylation","termid":"GO:0016926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein desumoylation","termid":"GO:0060188"}


id: PBO:0055933
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 39","termid":"PBO:0055933"}


id: GO:0022606
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the polarity of a cell along its proximal/distal axis.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of monopolar cell polarity","termid":"GO:0061162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of proximal/distal cell polarity","termid":"GO:0022606"}


id: GO:0042819
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  {"annotated_genes":["SJAG_01543","SJAG_01383","SJAG_01881","SJAG_00283","SJAG_00252","SJAG_00691","SJAG_00707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[95787,111781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[96974,110487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[83859,91603,63430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[91604,83861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.","definition_xrefs":["PMID:16157873","PMID:30671974","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vitamin B6 biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyridoxine-5'-phosphate biosynthesis","type":"related"},{"name":"vitamin B6 anabolism","type":"exact"},{"name":"vitamin B6 biosynthesis","type":"exact"},{"name":"vitamin B6 formation","type":"exact"},{"name":"vitamin B6 synthesis","type":"exact"}],"termid":"GO:0042819","terms_by_termid":{"GO:0008615":null,"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042821":null,"GO:0042823":null}}


id: PBO:0030051
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_anaphase_A","termid":"PBO:0030051"}


id: GO:0061487
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which DNA-dependent DNA replication is started at a late origin of replication. A late origin of replication refers to an origin that is activated late in S phase.","definition_xrefs":["GOC:dph","PMID:19221029"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication initiation from late origin (obsolete GO:0061487)","synonyms":[{"name":"late replication origin firing","type":"exact"}],"termid":"GO:0061487"}


id: GO:0019611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-toluenecarboxylate, 4-methylbenzenecarboxylate, the anion of carboxylic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"4-toluenecarboxylate metabolic process","synonyms":[{"name":"4-toluenecarboxylate metabolism","type":"exact"},{"name":"p-toluate metabolic process","type":"exact"},{"name":"p-toluate metabolism","type":"exact"}],"termid":"GO:0019611"}


id: PBO:0076678
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1 pseudogene 3","termid":"PBO:0076678"}


id: PBO:0058492
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5687","termid":"PBO:0058492"}


id: GO:0001854
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3d product of the complement cascade.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"complement component C3d binding","termid":"GO:0001854"}


id: GO:0021520
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"part_of","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord motor neuron cell fate specification","termid":"GO:0021520"}


id: PBO:0047954
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, 5-azacytidine type, common, fra(19)(q13)","termid":"PBO:0047954"}


id: PBO:0080853
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YEATS domain containing 2","termid":"PBO:0080853"}


id: GO:0036412
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + oxalate = acetate + oxalyl-CoA.","definition_xrefs":["PMID:23935849","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"acetyl-CoA:oxalate CoA-transferase","secondary_identifiers":["RHEA:37883"],"termid":"GO:0036412"}


id: PBO:0055205
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2630","termid":"PBO:0055205"}


id: PR:P79058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug134 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA stability protein mug134 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.16","synonyms":[{"name":"Spom972h-mug134","type":"exact"},{"name":"initiation of G zero protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79058"}


id: SO:0002202
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat region that is prone to expansions and/or contractions.","direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_repeat","termid":"SO:0000705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat_instability_region","synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:repeat_instability_region","type":"exact"},{"name":"repeat instability region","type":"exact"}],"termid":"SO:0002202"}


id: GO:1900833
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-leucine.","definition_xrefs":["GOC:TermGenie","PMID:10918062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid biosynthetic process","termid":"GO:0009082"},{"relation_name":"is_a","term_name":"D-amino acid biosynthetic process","termid":"GO:0046437"},{"relation_name":"is_a","term_name":"D-leucine metabolic process","termid":"GO:1900831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"D-leucine biosynthetic process","synonyms":[{"name":"D-leucine anabolism","type":"exact"},{"name":"D-leucine biosynthesis","type":"exact"},{"name":"D-leucine formation","type":"exact"},{"name":"D-leucine synthesis","type":"exact"}],"termid":"GO:1900833"}


id: GO:0100015
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates inositol biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of inositol biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100015)","termid":"GO:0100015"}


id: GO:0045494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light.","definition_xrefs":["GOC:bf","GOC:rl","CL:0000210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"retina homeostasis","termid":"GO:0001895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell maintenance","termid":"GO:0045494"}


id: PBO:0001224
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase (predicted)","termid":"PBO:0001224"}


id: GO:0015849
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  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pore.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00232":null,"SJAG_00275":null,"SJAG_00276":null,"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00671":null,"SJAG_00991":null,"SJAG_01406":null,"SJAG_01505":null,"SJAG_01872":null,"SJAG_01924":null,"SJAG_01960":null,"SJAG_02011":null,"SJAG_02029":null,"SJAG_02140":null,"SJAG_02605":null,"SJAG_02716":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03503":null,"SJAG_03591":null,"SJAG_03644":null,"SJAG_03899":null,"SJAG_03970":null,"SJAG_04295":null,"SJAG_04588":null,"SJAG_04593":null,"SJAG_04637":null,"SJAG_04706":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04905":null,"SJAG_04920":null,"SJAG_04984":null,"SJAG_05175":null,"SJAG_05325":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"organic acid transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015849","terms_by_termid":{"GO:0006843":null,"GO:0006847":null,"GO:0006850":null,"GO:0006868":null,"GO:0015742":null,"GO:0015743":null,"GO:0015813":null,"GO:0015825":null,"GO:0015828":null,"GO:0035432":null,"GO:0035433":null,"GO:0070778":null,"GO:0071422":null,"GO:0071423":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0097638":null,"GO:0097639":null,"GO:0098714":null,"GO:0098715":null,"GO:0098717":null,"GO:0098720":null,"GO:0110141":null,"GO:0140270":null,"GO:0140300":null,"GO:1901481":null,"GO:1901482":null,"GO:1901553":null,"GO:1902356":null,"GO:1902475":null,"GO:1903712":null,"GO:1903714":null,"GO:1903826":null,"GO:1904947":null,"GO:1904983":null,"GO:1905039":null,"GO:1905135":null,"GO:1905136":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905647":null,"GO:1990536":null,"GO:1990550":null,"GO:1990551":null,"GO:1990555":null,"GO:1990556":null,"GO:1990575":null,"GO:1990591":null,"GO:1990818":null}}


id: PBO:0089682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex HMG box protein Hap2","termid":"PBO:0089682"}


id: PBO:0087589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches; has mRNA binding activity","termid":"PBO:0087589"}


id: PBO:0061114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 5","termid":"PBO:0061114"}


id: PBO:0053453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 402","termid":"PBO:0053453"}


id: GO:0018139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl phenylalanine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0243"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-phenylalanine thiazolecarboxylic acid (obsolete GO:0018139)","termid":"GO:0018139"}


id: PBO:0085460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted malonyl-CoA:ACP transferase; putative component of a type-II mitochondrial fatty acid synthase that produces intermediates for phospholipid remodeling","termid":"PBO:0085460"}


id: PBO:0053549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 556","termid":"PBO:0053549"}


id: GO:0060085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the extent of smooth muscle contraction is reduced in the bladder outlet that contributes to the expulsion of urine from the body.","definition_xrefs":["GOC:dph","PMID:15827347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relaxation of smooth muscle","termid":"GO:0044557"},{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"part_of","term_name":"micturition","termid":"GO:0060073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle relaxation of the bladder outlet","synonyms":[{"name":"synaptic transmission involved in urination","type":"exact"}],"termid":"GO:0060085"}


id: FYPO:0000921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of aconitate hydratase (also known as aconitase) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal aconitate hydratase activity","termid":"FYPO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"increased aconitate hydratase activity","synonyms":[{"name":"increased aconitase activity","type":"exact"}],"termid":"FYPO:0000921"}


id: PBO:0076588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 10A","termid":"PBO:0076588"}


id: GO:0099085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-[(3,5-dichloro-2,6-dihydroxy-4-methoxy)phenyl]hexan-1-one => 1-[(3-chloro-2,6-dihydroxy-4-methoxy)phenyl]hexan-1-one + Cl-.","definition_xrefs":["PMID:1521542","PMID:22035794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DIF dechlorinase activity","synonyms":[{"name":"1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one 3(5)-dechlorinase activity","type":"exact"},{"name":"1-[(3,5-dichloro-2,6-dihydroxy-4-methoxy)phenyl]hexan-1-one 3(5)-dechlorinase activity","type":"exact"},{"name":"DIF-1 3(5)-dechlorinase activity","type":"exact"},{"name":"DIF-1 dechlorinase activity","type":"exact"},{"name":"differentiation-inducing factor 1 dechlorinase activity","type":"exact"},{"name":"differentiation-inducing factor dechlorinase activity","type":"exact"}],"termid":"GO:0099085"}


id: PBO:0039017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylformamidase","termid":"PBO:0039017"}


id: PBO:0113537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein of unknown function; targeted to vacuole via AP-3 pathway; member of multidrug resistance family; not an essential gene","termid":"PBO:0113537"}


id: GO:1903002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lipid transport across blood-brain barrier.","definition_xrefs":["GOC:sjp","GOC:TermGenie","PMID:24345162","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of transport across blood-brain barrier","termid":"GO:0150201"},{"relation_name":"is_a","term_name":"regulation of lipid transport across blood-brain barrier","termid":"GO:1903000"},{"relation_name":"positively_regulates","term_name":"lipid transport across blood-brain barrier","termid":"GO:1990379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of lipid transport across blood-brain barrier","synonyms":[{"name":"activation of lipid transport across blood brain barrier","type":"narrow"},{"name":"positive regulation of lipid transport across blood brain barrier","type":"exact"},{"name":"up regulation of lipid transport across blood brain barrier","type":"exact"},{"name":"up-regulation of lipid transport across blood brain barrier","type":"exact"},{"name":"upregulation of lipid transport across blood brain barrier","type":"exact"}],"termid":"GO:1903002"}


id: PBO:0046280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastin microfibril interfacer 2","termid":"PBO:0046280"}


id: GO:0051718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + CpG (in DNA) = S-adenosyl-L-homocysteine + 5-MeCpG (in DNA).","definition_xrefs":["EC:2.1.1.37","PMID:15689527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA (cytosine-5-)-methyltransferase activity","termid":"GO:0003886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741","GO:0140097"],"is_obsolete":false,"name":"DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates","secondary_identifiers":["Reactome:R-HSA-5334151"],"synonyms":[{"name":"HpaII methylase","type":"narrow"},{"name":"HpaII' methylase","type":"narrow"},{"name":"M.BsuRIa","type":"narrow"},{"name":"M.BsuRIb","type":"narrow"}],"termid":"GO:0051718"}


id: GO:0080040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to phosphate starvation.","definition_xrefs":["PMID:18315545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cellular response to phosphate starvation","termid":"GO:0140255"},{"relation_name":"positively_regulates","term_name":"cellular response to phosphate starvation","termid":"GO:0016036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to phosphate starvation","termid":"GO:0080040"}


id: PBO:0029404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromosome_morphology","termid":"PBO:0029404"}


id: SO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet consisting of two H-bonds in which: the main-chain NH of residue(i) is H-bonded to the main-chain CO of residue(i+4), the main-chain CO of residue i is H-bonded to the main-chain NH of residue(i+3), these loops have an RL nest at residues i+2 and i+3.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_bulge_loop","termid":"SO:0001108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge_loop_five","secondary_identifiers":["BS:00210"],"synonyms":[{"name":"beta bulge loop five","type":"exact"}],"termid":"SO:0001109"}


id: GO:1904158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal central apparatus.","definition_xrefs":["GOC:cilia","GOC:krc","GOC:TermGenie","GO_REF:0000079","PMID:9295136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"axoneme assembly","termid":"GO:0035082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"axonemal central apparatus assembly","synonyms":[{"name":"axonemal central apparatus formation","type":"exact"}],"termid":"GO:1904158"}


id: PBO:0089248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC SUMO ligase subunit Nse2","termid":"PBO:0089248"}


id: GO:0099527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals that conveys information from the postsynapse to the nucleus via cytoskeletal transport of a protein from a postsynapse to the component to the nucleus where it affects biochemical processes that occur in the nucleus (e.g DNA transcription, mRNA splicing, or DNA/histone modifications).","definition_xrefs":["GOC:dos","PMID:25652077","PMID:24317321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic signal transduction","termid":"GO:0098926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"postsynapse to nucleus signaling pathway","synonyms":[{"name":"postsynaptic signaling to nucleus","type":"exact"}],"termid":"GO:0099527"}


id: PBO:0069676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 953, pseudogene","termid":"PBO:0069676"}


id: PBO:0050662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 1B","termid":"PBO:0050662"}


id: PBO:0067912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 214","termid":"PBO:0067912"}


id: PBO:0042993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 6","termid":"PBO:0042993"}


id: GO:0007377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Elongation of the germ band on the ventral side of the embryo, accompanied by a halving in width. The elongation process pushes the posterior midgut invagination closed and compresses the amnioserosa further.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"gastrulation involving germ band extension","termid":"GO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-band extension","termid":"GO:0007377"}


id: PR:Q9P7E9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC14C4.15c gene.","definition_xrefs":["UniProtKB:Q9P7E9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl aminopeptidase C14C4.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.15c","synonyms":[{"name":"Spom972h-SPAC14C4.15c","type":"exact"}],"termid":"PR:Q9P7E9"}


id: PBO:0069966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1261, pseudogene","termid":"PBO:0069966"}


id: PR:O14171
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrodolichyl diphosphate syntase complex subunit SPAC4D7.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.04c","secondary_identifiers":["UniProtKB:O14171"],"synonyms":[{"name":"Spom972h-uppS","type":"exact"},{"name":"ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific) (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14171"}


id: SO:0001541
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that decreases the level of mature, spliced and processed RNA with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"level_of_transcript_variant","termid":"SO:0001540"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_transcript_level_variant","synonyms":[{"name":"decreased transcript level","type":"exact"}],"termid":"SO:0001541"}


id: PBO:0112982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' to 3' exonuclease, 5' flap endonuclease; required for Okazaki fragment processing and maturation, for long-patch base-excision repair and large loop repair (LLR), ribonucleotide excision repair; cleaves off RNA flap in a RNA:DNA hybrid intermediate during processing of DNA lagging strand; relocalizes to the cytosol in response to hypoxia; member of the S. pombe RAD2/FEN1 family","termid":"PBO:0112982"}


id: GO:0044136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of the symbiont from an initial condition to a later condition, occurring on or near its host rhizosphere. The host rhizosphere is defined as total below-ground surfaces of a plant as a habitat for its symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont on or near host rhizosphere (obsolete GO:0044136)","termid":"GO:0044136"}


id: GO:0062203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + peregrinol diphosphate = diphosphate + viteagnusin D.","definition_xrefs":["RHEA:62180","PMID:29315936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"Viteagnusin D synthase activity","termid":"GO:0062203"}


id: PBO:0085498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein adaptor between Myo4p and the She2p-mRNA complex; part of the mRNA localization machinery that restricts accumulation of certain proteins to the bud; also required for cortical ER inheritance","termid":"PBO:0085498"}


id: PBO:0066147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 3","termid":"PBO:0066147"}


id: GO:0021762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the substantia nigra over time from its initial formation until its mature state. The substantia nigra is the layer of gray substance that separates the posterior parts of the cerebral peduncles (tegmentum mesencephali) from the anterior parts; it normally includes a posterior compact part with many pigmented cells (pars compacta) and an anterior reticular part whose cells contain little pigment (pars reticularis).","definition_xrefs":["ISBN:0878937420","GOC:cls","GOC:dph","GOC:dgh","GOC:jid","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"midbrain development","termid":"GO:0030901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substantia nigra development","termid":"GO:0021762"}


id: FYPO:0005498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements occurs to a greater extent than normal during a cellular response to miconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription from CRE promoter","termid":"FYPO:0005495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"increased transcription from CRE promoter during cellular response to miconazole","synonyms":[{"name":"expression of CRE target genes increased during cellular response to miconazole","type":"related"},{"name":"increased transcription from CRE promoter during cellular response to miconazole during mitotic cell cycle","type":"related"},{"name":"increased transcription from CRE promoter during cellular response to miconazole during vegetative growth","type":"exact"}],"termid":"FYPO:0005498"}


id: GO:0005050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome receptor (obsolete GO:0005050)","synonyms":[{"name":"peroxisome receptor","type":"exact"}],"termid":"GO:0005050"}


id: GO:0043671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner part of the exine, which stains.","definition_xrefs":["PMID:28904424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"exine","termid":"GO:0043668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endexine","termid":"GO:0043671"}


id: GO:0001879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a yeast is received and converted into a molecular signal.","definition_xrefs":["PMID:14707091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to yeast","termid":"GO:0001878"},{"relation_name":"is_a","term_name":"detection of fungus","termid":"GO:0016046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of yeast","termid":"GO:0001879"}


id: PBO:0049729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis A virus cellular receptor 1","termid":"PBO:0049729"}


id: GO:0032675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-6 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-6 production","termid":"GO:0032635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-6 production","secondary_identifiers":["GO:0045408"],"synonyms":[{"name":"regulation of IL-6 production","type":"exact"},{"name":"regulation of interleukin-6 biosynthetic process","type":"narrow"}],"termid":"GO:0032675"}


id: GO:0090021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and increasing the rate or extent of posterior neural plate formation.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of posterior neural plate formation by Wnt signaling pathway (obsolete GO:0090021)","synonyms":[{"name":"positive regulation of posterior neural plate formation by Wnt receptor signaling pathway","type":"exact"},{"name":"positive regulation of posterior neural plate formation by Wnt receptor signalling pathway","type":"exact"},{"name":"positive regulation of posterior neural plate formation by Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0090021"}


id: GO:0102843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-acyl-2-hexadecanoyl-glycerolipid + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = a 1-acyl-2-[(7Z)-hexadecenoyl]-glycerolipid + 2 H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:46756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"palmitoyl-[glycerolipid] 7-desaturase activity","secondary_identifiers":["EC:1.14.19.42","MetaCyc:RXN-16048"],"synonyms":[{"name":"1-18:2-2-16:0-monogalactosyldiacylglycerol desaturase activity (SN2-16:1 forming)","type":"exact"}],"termid":"GO:0102843"}


id: FYPO:0005780
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the mitotic spindle assembly checkpoint is decreased. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0072479","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000298","FYPO:0001985"],"is_obsolete":false,"name":"decreased response to mitotic spindle assembly checkpoint signaling","synonyms":[{"name":"decreased mitotic spindle assembly checkpoint during vegetative growth","type":"exact"},{"name":"decreased response to mitotic cell cycle spindle assembly checkpoint signaling","type":"exact"},{"name":"decreased spindle assembly checkpoint during mitotic cell cycle","type":"exact"},{"name":"reduced response to mitotic spindle assembly checkpoint signaling","type":"exact"}],"termid":"FYPO:0005780"}


id: PBO:0050013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, A","termid":"PBO:0050013"}


id: PBO:0087908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor for glycerol biosynthetic genes; required for the transient induction of glycerol biosynthetic genes GPD1 and GPP2 in response to high osmolarity; targets Hog1p to osmostress responsive promoters; has similarity to Msn1p and Gcr1p","termid":"PBO:0087908"}


id: GO:0180036
data:
  {"annotated_genes":["SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114176],"is_not":false,"summary":null,"term":"GO:0180036"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant lncRNAs within the nucleus.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear lncRNA surveillance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180036","terms_by_termid":{"GO:0180036":null}}


id: PBO:0052607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAS proto-oncogene, GTPase pseudogene 1","termid":"PBO:0052607"}


id: PBO:0060815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEBL antisense RNA 1","termid":"PBO:0060815"}


id: PBO:0045086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like canonical Notch ligand 4","termid":"PBO:0045086"}


id: PBO:0002145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, SGT2 family (predicted)","termid":"PBO:0002145"}


id: FYPO:0001003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more, but smaller, vacuoles than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lipid droplets present in spore cytoplasm in decreased numbers, mislocalized to ascus epiplasm","termid":"FYPO:0006053"},{"relation_name":"is_a","term_name":"small vacuoles present in increased numbers","termid":"FYPO:0002258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles present in increased numbers during nitrogen starvation","synonyms":[{"name":"fragmented vacuoles during nitrogen starvation","type":"related"},{"name":"small vacuoles present in greater numbers during nitrogen starvation","type":"exact"},{"name":"small vacuoles present in increased numbers during nitrogen depletion","type":"exact"},{"name":"small vacuoles present in increased numbers during nitrogen deprivation","type":"exact"},{"name":"vacuole organization defects, fragmented vacuoles during nitrogen starvation","type":"related"},{"name":"vacuoles present in increased numbers, with decreased vacuole size, during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001003"}


id: GO:0150006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for the activation of urease. Activator subunits dissociate before urease has catalytic function.","definition_xrefs":["PMID:16244137","GOC:bhm","PMID:28710280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator complex","termid":"GO:0150005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"urease activator complex","termid":"GO:0150006"}


id: FYPO:0001505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular phosphatidylserine level","synonyms":[{"name":"increased cellular PS level","type":"exact"},{"name":"increased cellular phosphatidyl-L-serine level","type":"exact"},{"name":"increased cellular phosphatidylserine level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylserine level during vegetative growth","type":"exact"},{"name":"increased phosphatidylserine accumulation","type":"related"}],"termid":"FYPO:0001505"}


id: FYPO:0006783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more carbohydrate metabolism RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Carbohydrate metabolism RNAs are transcribed from genes whose products are involved in metabolism of one or more carbohydrates.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased level of carbohydrate metabolism gene mRNA during vegetative growth","synonyms":[{"name":"increased carbohydrate metabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of carbohydrate metabolism gene RNA during vegetative growth","type":"exact"},{"name":"increased level of carbohydrate metabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of carbohydrate metabolism gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0006783"}


id: PBO:0052052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KANSL1L antisense RNA 1","termid":"PBO:0052052"}


id: PBO:0049892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 11","termid":"PBO:0049892"}


id: GO:0031786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1B melatonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin receptor binding","termid":"GO:0031784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 1B melatonin receptor binding","synonyms":[{"name":"type 1B melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031786"}


id: PBO:0047875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(3)(q25)","termid":"PBO:0047875"}


id: POMBASE_GENE_EX_REL:regulates_activity_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_activity_of","termid":"POMBASE_GENE_EX_REL:regulates_activity_of"}


id: PATO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001119 absolute momentum value (obsolete PATO:0001119)","termid":"PATO:0001119"}


id: GO:1905112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of centromere clustering at the nuclear envelope.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22375062"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of centromere clustering at the mitotic nuclear envelope (obsolete GO:1905112)","synonyms":[{"name":"regulation of centromere clustering at the nuclear periphery","type":"exact"},{"name":"regulation of centromere-SPB clustering","type":"related"},{"name":"regulation of kinetochore clustering at SPB","type":"related"},{"name":"regulation of kinetochore clustering at spindle pole body","type":"related"},{"name":"regulation of kinetochore clustering at the old mitotic spindle pole body","type":"related"},{"name":"regulation of kinetochore localization at spindle pole body","type":"related"},{"name":"regulation of rabl configuration","type":"related"}],"termid":"GO:1905112"}


id: PATO:0000984
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A porosity quality inhering in a bearer by virtue of the bearer's being capable of admitting the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porosity","termid":"PATO:0000973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porous","termid":"PATO:0000984"}


id: GO:0060050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the glycosylation of one or more amino acid residues within a protein. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.","definition_xrefs":["GOC:dms","GOC:dph","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein glycosylation","termid":"GO:0060049"},{"relation_name":"positively_regulates","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"positive regulation of protein glycosylation","synonyms":[{"name":"positive regulation of protein amino acid glycosylation","type":"exact"}],"termid":"GO:0060050"}


id: GO:0008701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-2-oxopentanoate = acetaldehyde + pyruvate.","definition_xrefs":["EC:4.1.3.39","RHEA:22624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-2-oxovalerate aldolase activity","secondary_identifiers":["UM-BBD_enzymeID:e0077","GO:0018804","KEGG_REACTION:R00750","MetaCyc:MHPELY-RXN"],"synonyms":[{"name":"4-hydroxy-2-ketovalerate aldolase activity","type":"related"},{"name":"4-hydroxy-2-oxopentanoate pyruvate-lyase (acetaldehyde-forming) activity","type":"related"},{"name":"4-hydroxy-2-oxopentanoate pyruvate-lyase activity","type":"related"},{"name":"4-hydroxy-2-oxovalerate pyruvate-lyase activity","type":"related"},{"name":"DmpG","type":"related"},{"name":"HOA","type":"related"}],"termid":"GO:0008701"}


id: PR:O74751
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1734.10c gene.","definition_xrefs":["UniProtKB:O74751","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1734.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.10c","synonyms":[{"name":"Spom972h-SPBC1734.10c","type":"exact"}],"termid":"PR:O74751"}


id: GO:1990625
data:
  {"annotated_genes":["SJAG_03869","SJAG_00690","SJAG_00169","SJAG_00786","SJAG_02592","SJAG_01942"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88609,88907,90473,95434,105773,111699],"is_not":false,"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of cytoplasmic translation initiation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:vw","PMID:12242291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translational initiation","termid":"GO:1904689"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation in response to stress","termid":"GO:1990611"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02592":null,"SJAG_03869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0002181","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of cytoplasmic translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990625","terms_by_termid":{"GO:1990625":null}}


id: GO:0036014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the cyanelle envelope; includes the peptidoglycan layer.","definition_xrefs":["GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid intermembrane space","termid":"GO:0009529"},{"relation_name":"part_of","term_name":"cyanelle envelope","termid":"GO:0033112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cyanelle intermembrane space","synonyms":[{"name":"cyanelle envelope lumen","type":"exact"},{"name":"cyanelle periplasm","type":"exact"}],"termid":"GO:0036014"}


id: PBO:0077420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 158","termid":"PBO:0077420"}


id: GO:0003260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cardiac progenitor cell to form the heart field. Cardiac progenitor cells are non-terminally differentiated, mesoderm-derived cells that are committed to differentiate into cells of the heart. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart formation","termid":"GO:0060974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardioblast migration","termid":"GO:0003260"}


id: GO:0099631
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cytoplasmic component of the postsynaptic endocytic zone.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"postsynaptic endocytic zone","termid":"GO:0098843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"postsynaptic endocytic zone cytoplasmic component","termid":"GO:0099631"}


id: PBO:0030654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_methylamine","termid":"PBO:0030654"}


id: PBO:0085475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable Hsp40p co-chaperone; has a DnaJ-like domain and appears to be involved in ER-associated degradation of misfolded proteins containing a tightly folded cytoplasmic domain; inhibits replication of Brome mosaic virus in S. cerevisiae","termid":"PBO:0085475"}


id: GO:0032694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-11 production.","definition_xrefs":["PMID:29286137","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-11 production","termid":"GO:0032654"},{"relation_name":"negatively_regulates","term_name":"interleukin-11 production","termid":"GO:0032614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-11 production","secondary_identifiers":["GO:0045364","GO:0150170"],"synonyms":[{"name":"down regulation of interleukin-11 production","type":"exact"},{"name":"down-regulation of interleukin-11 production","type":"exact"},{"name":"downregulation of interleukin-11 production","type":"exact"},{"name":"inhibition of interleukin-11 production","type":"narrow"},{"name":"negative regulation of IL-11 production","type":"exact"},{"name":"negative regulation of interleukin-11 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-11 secretion","type":"narrow"}],"termid":"GO:0032694"}


id: GO:0047390
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycero-3-phosphocholine + H2O = choline phosphate + glycerol + H+.","definition_xrefs":["EC:3.1.4.38","RHEA:19545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"glycerophosphocholine cholinephosphodiesterase activity","secondary_identifiers":["KEGG_REACTION:R02591","MetaCyc:3.1.4.38-RXN","Reactome:R-HSA-6814797"],"synonyms":[{"name":"L-3-glycerylphosphinicocholine cholinephosphohydrolase activity","type":"related"},{"name":"sn-glycero-3-phosphocholine cholinephosphohydrolase activity","type":"related"}],"termid":"GO:0047390"}


id: PBO:0091883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-sugar 4,6-dehydratase","termid":"PBO:0091883"}


id: GO:0036397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formate + a quinone = CO2 + a quinol.","definition_xrefs":["GOC:bhm","RHEA:48592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"formate dehydrogenase (quinone) activity","secondary_identifiers":["KEGG_REACTION:R09494","MetaCyc:FORMATEDEHYDROG-RXN","EC:1.17.5.3"],"synonyms":[{"name":"Fdh-N activity","type":"related"},{"name":"formate dehydrogenase-N activity","type":"related"},{"name":"formate:quinone oxidoreductase activity","type":"related"}],"termid":"GO:0036397"}


id: PBO:0051126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-4 (pseudogene)","termid":"PBO:0051126"}


id: GO:0030097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates.","definition_xrefs":["ISBN:0198506732","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemopoiesis","secondary_identifiers":["Wikipedia:Haematopoiesis"],"synonyms":[{"name":"blood cell biosynthesis","type":"exact"},{"name":"blood cell formation","type":"exact"},{"name":"haemopoiesis","type":"exact"},{"name":"hematopoiesis","type":"exact"}],"termid":"GO:0030097"}


id: PR:P36605
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histidinol-phosphate aminotransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02885","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphate aminotransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.02c","secondary_identifiers":["UniProtKB:P36605"],"synonyms":[{"name":"Spom972h-hisC","type":"exact"},{"name":"imidazole acetol-phosphate transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36605"}


id: PBO:0036517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex variant subunit Cbc3","termid":"PBO:0036517"}


id: PBO:0109517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 4E, pseudogene","termid":"PBO:0109517"}


id: GO:0095500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an acetylcholine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic signal transduction","termid":"GO:0098926"},{"relation_name":"part_of","term_name":"cellular response to acetylcholine","termid":"GO:1905145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"acetylcholine receptor signaling pathway","synonyms":[{"name":"acetylcholine receptor signalling pathway","type":"exact"}],"termid":"GO:0095500"}


id: PBO:0047664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase like","termid":"PBO:0047664"}


id: PBO:0045903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease/exonuclease/phosphatase family domain containing 1","termid":"PBO:0045903"}


id: GO:0061627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-L-methionine + L-homocysteine = 2 L-methionine + H+.","definition_xrefs":["GOC:dph","GOC:BHF","EC:2.1.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"S-methylmethionine-homocysteine S-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5696838","RHEA:26337","MetaCyc:MMUM-RXN"],"synonyms":[{"name":"S-methylmethionine homocysteine transmethylase activity","type":"related"},{"name":"homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine transmethylase activity","type":"related"},{"name":"methylmethionine:homocysteine methyltransferase activity","type":"related"}],"termid":"GO:0061627"}


id: FYECO:0000392
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which caspofungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ echinocandin","termid":"FYECO:0000391"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ caspofungin","termid":"FYECO:0000392"}


id: PBO:0072889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strawberry notch homolog 1","termid":"PBO:0072889"}


id: PBO:0065906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabaptin, RAB GTPase binding effector protein 2","termid":"PBO:0065906"}


id: PBO:0041465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 120","termid":"PBO:0041465"}


id: MOD:01640
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-isoleucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine removal","termid":"MOD:01640"}


id: PATO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000459 relative quantity value (obsolete PATO:0000459)","termid":"PATO:0000459"}


id: GO:0102812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaryl-CoA + cyanidin 3-O-beta-D-glucoside betaine = cyanidin 3-(p-coumaroyl)-glucoside + coenzyme A.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"4-coumaroyl-CoA:cyanidin-3-O-beta-D-glucoside-6''-O-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8204"],"termid":"GO:0102812"}


id: GO:0098509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to detect some level of humidity in its environment, convert this detection into a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["PMID:18269908","PMID:8650222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of humidity","synonyms":[{"name":"hygrosensory perception","type":"exact"}],"termid":"GO:0098509"}


id: PBO:0060518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear prelamin A recognition factor","termid":"PBO:0060518"}


id: PBO:0070320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 9","termid":"PBO:0070320"}


id: GO:2000650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"negative regulation of sodium ion transmembrane transport","termid":"GO:1902306"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of sodium ion transmembrane transporter activity","synonyms":[{"name":"negative regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000650"}


id: GO:0030707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that occurs during oogenesis involving the ovarian follicle cells, somatic cells which surround the germ cells of an ovary. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:10822261","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicle cell of egg chamber development","termid":"GO:0030707"}


id: PBO:0012832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Septum Promoting GTPase","termid":"PBO:0012832"}


id: GO:0016137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoside metabolic process","secondary_identifiers":["GO:0016140"],"synonyms":[{"name":"O-glycoside metabolic process","type":"exact"},{"name":"O-glycoside metabolism","type":"exact"},{"name":"glycoside metabolism","type":"exact"}],"termid":"GO:0016137"}


id: PATO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000106 acid sensitivity (obsolete PATO:0000106)","termid":"PATO:0000106"}


id: PBO:0044797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 10, pseudogene","termid":"PBO:0044797"}


id: GO:0017077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of protons from mitochondrial intermembrane space into mitochondrial matrix, dissipating the proton gradient across the mitochondrial inner membrane established by the electron transport chain during the oxidative phosphorylation (proton leak). Proton leak uncouples the processes of electron transport/proton generation and ATP synthesis.","definition_xrefs":["PMID:15738989","PMID:16179945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"oxidative phosphorylation uncoupler activity","secondary_identifiers":["GO:0015302"],"synonyms":[{"name":"mitochondrial uncoupling protein activity","type":"narrow"},{"name":"uncoupling protein activity","type":"narrow"}],"termid":"GO:0017077"}


id: FYECO:0000037
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which bismuth ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Bi ions","synonyms":[{"name":"bismuth ions added","type":"exact"}],"termid":"FYECO:0000037"}


id: GO:0043922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a host organism stops, prevents, or reduces the frequency, rate or extent of viral transcription.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of symbiont process","termid":"GO:0051851"},{"relation_name":"negatively_regulates","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation by host of viral transcription","synonyms":[{"name":"negative regulation of viral transcription by host","type":"exact"}],"termid":"GO:0043922"}


id: PBO:0031059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_long_cells_(obsolete_FYPO:0000318)","termid":"PBO:0031059"}


id: GO:0097484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single dendrite involved in cellular development.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection extension","termid":"GO:1990138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite extension","termid":"GO:0097484"}


id: GO:0045466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of the R7 photoreceptor.","definition_xrefs":["PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R7 cell differentiation","termid":"GO:0045466"}


id: GO:0018528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: iminodiacetate + OH- = H+ + 2 e- + glyoxylate + glycine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete iminodiacetate dehydrogenase activity (obsolete GO:0018528)","termid":"GO:0018528"}


id: PBO:0076099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 5","termid":"PBO:0076099"}


id: GO:0051823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synapse structural plasticity. Synapse structural plasticity is a type of cytoskeletal remodeling; this remodeling is induced by stimuli that can lead to long term potentiation and it can be activity-dependent or -independent. Examples of cytoskeletal changes include the formation of new spines and increase in spine size; this can be accompanied by the insertion of greater numbers of glutamate (or other neurotransmitter) receptors into the post-synaptic membrane.","definition_xrefs":["PMID:14976517","PMID:11063967","PMID:9884123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse structural plasticity","synonyms":[{"name":"regulation of synaptic structural plasticity","type":"exact"}],"termid":"GO:0051823"}


id: GO:0047488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the eliminative cleavage of polysaccharides containing 1,4-linked D-glucuronate or L-iduronate residues and 1,4-alpha-linked 2-sulfoamino-2-deoxy-6-sulfo-D-glucose residues to give oligosaccharides with terminal 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their nonreducing ends.","definition_xrefs":["EC:4.2.2.7","MetaCyc:4.2.2.7-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"heparin lyase activity","synonyms":[{"name":"heparan sulfate lyase activity","type":"related"},{"name":"heparin eliminase activity","type":"related"},{"name":"heparinase activity","type":"related"}],"termid":"GO:0047488"}


id: GO:0110126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of loading solutes into the sieve tube or companion cell of the phloem for long distance transport from source to sink.","definition_xrefs":["PMID:19025382","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phloem transport","termid":"GO:0010233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"phloem loading","termid":"GO:0110126"}


id: PBO:0074718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 78","termid":"PBO:0074718"}


id: PBO:0041548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 32","termid":"PBO:0041548"}


id: PBO:0038511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 2","termid":"PBO:0038511"}


id: GO:1900577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gerfelin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"gerfelin metabolic process","termid":"GO:1900576"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0019748"],"is_obsolete":false,"name":"gerfelin catabolic process","synonyms":[{"name":"gerfelin breakdown","type":"exact"},{"name":"gerfelin catabolism","type":"exact"},{"name":"gerfelin degradation","type":"exact"}],"termid":"GO:1900577"}


id: PR:P0CS87
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBCPT2R1.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CS87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein CPT2R1.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBCPT2R1.01c","synonyms":[{"name":"Spom972h-SPBCPT2R1.01c","type":"exact"}],"termid":"PR:P0CS87"}


id: PBO:0061832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 1","termid":"PBO:0061832"}


id: PBO:0081200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 2","termid":"PBO:0081200"}


id: FYPO:0003700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of snoRNA primary transcripts measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered snoRNA or precursor level","termid":"FYPO:0005998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased snoRNA primary transcript level","synonyms":[{"name":"increased small nucleolar RNA primary transcript level","type":"exact"},{"name":"increased snoRNA primary transcript accumulation","type":"related"},{"name":"increased snoRNA primary transcript level during mitotic cell cycle","type":"related"},{"name":"increased snoRNA primary transcript level during vegetative growth","type":"exact"},{"name":"increased snoRNA transcript level","type":"broad"}],"termid":"FYPO:0003700"}


id: GO:1900061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in calcium-mediated signaling.","definition_xrefs":["PMID:9407035","PMID:9407036","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in calcium-mediated signaling (obsolete GO:1900061)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter of calcium signaling","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter of calcium signalling","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of calcium ion signaling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of calcium signaling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of calcium signalling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of calcium-mediated signaling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of calcium-mediated signalling","type":"related"},{"name":"positive regulation of transcription from Pol II promoter of calcium ion signaling","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter of calcium signaling","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter of calcium signalling","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter of calcium-mediated signaling","type":"related"},{"name":"positive regulation of transcription from Pol II promoter of calcium-mediated signalling","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in calcium-mediated signaling","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter of calcium ion signaling","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter of calcium signaling","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter of calcium signalling","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter of calcium signaling","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter of calcium signalling","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"stimulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter of calcium signaling","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter of calcium signalling","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter of calcium signaling","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter of calcium signalling","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter of calcium signaling","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter of calcium signalling","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"exact"}],"termid":"GO:1900061"}


id: PBO:0028767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_glucose_starvation","termid":"PBO:0028767"}


id: GO:0046441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-lysine, the D-enantiomer of lysine; i.e. (2R)-2,6-diaminohexanoic acid.","definition_xrefs":["GOC:jsg","GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine metabolic process","termid":"GO:0006553"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-lysine metabolic process","synonyms":[{"name":"D-lysine metabolism","type":"exact"}],"termid":"GO:0046441"}


id: MOD:01489
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","termid":"MOD:01485"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01489"}


id: GO:0090121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly into constituent parts of the low-density lipoprotein particle in the lysosome that contributes to cholesterol transport.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low-density lipoprotein particle disassembly","termid":"GO:0090495"},{"relation_name":"part_of","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle disassembly involved in cholesterol transport","termid":"GO:0090121"}


id: GO:0016081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial (indirect) attachment of a synaptic vesicle membrane to the presynaptic active zone membrane, mediated by proteins protruding from the membrane and proteins of the presynaptic active zone cytoplasmic component. Synaptic vesicle tethering is the first step in this process.","definition_xrefs":["PMID:15217342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0016192","GO:0006810","GO:0140056","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle docking","synonyms":[{"name":"synaptic vesicle docking during exocytosis","type":"related"},{"name":"synaptic vesicle docking involved in exocytosis","type":"exact"}],"termid":"GO:0016081"}


id: PBO:0088071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease; specifically disassembles unanchored ubiquitin chains; involved in fructose-1,6-bisphosphatase (Fbp1p) degradation; similar to human isopeptidase T","termid":"PBO:0088071"}


id: PBO:0048879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member E, pseudogene","termid":"PBO:0048879"}


id: GO:0018503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-1,2-dihydrodiolphenanthrene + NAD+ = H+ + NADH + 1,2-dihydroxyphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-1,2-dihydrodiolphenanthrene dehydrogenase activity (obsolete GO:0018503)","termid":"GO:0018503"}


id: MOD:01542
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199039 Da","termid":"MOD:01584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01542"}


id: GO:0090290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte proliferation","termid":"GO:0070665"},{"relation_name":"is_a","term_name":"regulation of osteoclast proliferation","termid":"GO:0090289"},{"relation_name":"positively_regulates","term_name":"osteoclast proliferation","termid":"GO:0002158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of osteoclast proliferation","termid":"GO:0090290"}


id: MOD:01876
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a 4x(12)C labeled succinyl group.","definition_xrefs":["PubMed:11857757","PubMed:12716131","Unimod:64","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"4x(1)H,4x(12)C-labeled alpha-amino succinylated residue","synonyms":[{"name":"Succinic anhydride labeling reagent, light form (+4amu, 4H2) site N-term","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:01876"}


id: MOD:00211
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and a glycine residue by a thioester bond to form S-glycyl-L-cysteine.","definition_xrefs":["ChEBI:22050","PubMed:3306404","RESID:AA0206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(glycyl)-L-cysteine (Cys-Gly)","synonyms":[{"name":"(2R)-2-amino-3-[(aminoacetyl)sulfanyl]propanoic acid","type":"exact"},{"name":"1-(cystein-S-yl)-glycinate","type":"exact"},{"name":"ACT_SITE Glycyl thioester intermediate","type":"exact"},{"name":"S-(2-amino-1-oxoethyl)cysteine","type":"exact"},{"name":"S-(glycyl)-L-cysteine","type":"exact"},{"name":"XLNK-SCys-1Gly","type":"exact"},{"name":"glycine cysteine thioester","type":"exact"}],"termid":"MOD:00211"}


id: GO:0048479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the style over time, from its formation to the mature structure. The style is an elongated part of a carpel, or group of fused carpels, and it lies between the ovary and the stigma.","definition_xrefs":["PO:0009074","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"carpel development","termid":"GO:0048440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"style development","termid":"GO:0048479"}


id: PBO:0082453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-3 sterol dehydrogenase; catalyzes the second of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; human homolog NSDHL implicated in CK syndrome, and can complement yeast null mutant; molecular target of natural product and antifungal compound FR171456","termid":"PBO:0082453"}


id: PBO:0068990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 234, pseudogene","termid":"PBO:0068990"}


id: PBO:0066315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPMS antisense RNA 1","termid":"PBO:0066315"}


id: PBO:0077402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 135","termid":"PBO:0077402"}


id: PBO:0065071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 2","termid":"PBO:0065071"}


id: FYPO:0008151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal in the pericentromeres. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:21211723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in heterochromatin","termid":"FYPO:0000855"},{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased nucleosome occupancy at centromeric heterochromatin","synonyms":[{"name":"decreased nucleosome occupancy at centromeric region","type":"related"}],"termid":"FYPO:0008151"}


id: GO:0003370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of mesendodermal cells to each other that contributes to the establishment of cell polarity that is part of the directed movement of the cells of the mesendoderm.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion involved in ameboidal cell migration","termid":"GO:0003367"},{"relation_name":"is_a","term_name":"cell-cell adhesion involved in gastrulation","termid":"GO:0070586"},{"relation_name":"part_of","term_name":"establishment of cell polarity involved in mesendodermal cell migration","termid":"GO:0003369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007163","GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion involved in mesendodermal cell migration","termid":"GO:0003370"}


id: GO:1904780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to centrosome.","definition_xrefs":["GOC:TermGenie","PMID:17115027","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to centrosome","termid":"GO:1904779"},{"relation_name":"negatively_regulates","term_name":"protein localization to centrosome","termid":"GO:0071539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to centrosome","synonyms":[{"name":"down regulation of protein localisation to centrosome","type":"exact"},{"name":"down regulation of protein localization to centrosome","type":"exact"},{"name":"down-regulation of protein localisation to centrosome","type":"exact"},{"name":"down-regulation of protein localization to centrosome","type":"exact"},{"name":"downregulation of protein localisation to centrosome","type":"exact"},{"name":"downregulation of protein localization to centrosome","type":"exact"},{"name":"inhibition of protein localisation to centrosome","type":"narrow"},{"name":"inhibition of protein localization to centrosome","type":"narrow"},{"name":"negative regulation of protein localisation to centrosome","type":"exact"}],"termid":"GO:1904780"}


id: PBO:0011171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit, ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0011171"}


id: PBO:0080735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing E3 ubiquitin protein ligase 1","termid":"PBO:0080735"}


id: GO:0033203
data:
  {"annotated_genes":["SJAG_03495"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114245],"is_not":false,"summary":null,"term":"GO:0033203"}]},"cv_name":"cellular_component","definition":"A homohexameric protein complex that possesses DNA helicase activity; associates with DNA polymerase alpha-primase and translocates in the 5' to 3' direction.","definition_xrefs":["PMID:9341218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA helicase A complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033203","terms_by_termid":{"GO:0033203":null}}


id: PBO:0051188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-6 (pseudogene)","termid":"PBO:0051188"}


id: PBO:0052032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JRK like","termid":"PBO:0052032"}


id: PBO:0092030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tyrosine (gua), mitochondrial","termid":"PBO:0092030"}


id: GO:0021929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to stellate cells. A cerebellar stellate cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","PMID:15157725","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stellate cell precursor proliferation","termid":"GO:0021929"}


id: PR:O14306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9G1.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate 5-phosphatase C9G1.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.10c","synonyms":[{"name":"Spom972h-SPAC9G1.10c","type":"exact"}],"termid":"PR:O14306"}


id: GO:0010031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organismal movement by which the tip of a plant organ follows a spiral pattern as a consequence of growth.","definition_xrefs":["GOC:mtg_MIT_16mar07","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal movement","termid":"GO:0050879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circumnutation","termid":"GO:0010031"}


id: GO:0071513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes decarboxylation of 4'-phosphopantothenoylcysteine to yield 4'-phosphopantetheine; this is the third step in the biosynthesis of Coenzyme A. The complex is homotrimeric in many eukaryotes, but is a heterotrimer in Saccharomyces.","definition_xrefs":["GOC:jh","PMID:19915539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phosphopantothenoylcysteine decarboxylase complex","termid":"GO:0071513"}


id: PR:P36626
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.14","synonyms":[{"name":"SPBC29A10.14","type":"related"},{"name":"Spom972h-rec8","type":"exact"},{"name":"cohesin rec8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36626"}


id: SO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000968 sequence_replication_mode (obsolete SO:0000968)","synonyms":[{"name":"sequence replication mode","type":"exact"}],"termid":"SO:0000968"}


id: PBO:0082350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the SFI superfamily; involved in nonsense mediated mRNA decay; required for efficient translation termination at nonsense codons and targeting of NMD substrates to P-bodies; binds to the small ribosomal subunit via an interaction with Rps26; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0082350"}


id: PR:Q9UUC9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mdm34 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUC9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein 34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.11c","synonyms":[{"name":"Spom972h-mdm34","type":"exact"}],"termid":"PR:Q9UUC9"}


id: GO:0030983
data:
  {"annotated_genes":["SJAG_02748","SJAG_02261","SJAG_01419","SJAG_04410","SJAG_01262","SJAG_02187","SJAG_02226","SJAG_00634","SJAG_01807","SJAG_01620"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84733,87863,94287,100665,111775],"is_not":false,"summary":null,"term":"GO:0030983"},{"annotations":[94283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032136"},{"annotations":[90973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035485"},{"annotations":[94284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035486"},{"annotations":[94285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035488"},{"annotations":[102159,112540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032137"},{"annotations":[102027,102160,96687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000404"},{"annotations":[102161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032138"},{"annotations":[94288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032141"},{"annotations":[94289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035487"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing one or more mismatches.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00634":null,"SJAG_01262":null,"SJAG_01419":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02261":null,"SJAG_02748":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mismatched DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0032134"],"synonyms":[{"name":"mispair binding","type":"exact"},{"name":"mispaired DNA binding","type":"exact"}],"termid":"GO:0030983","terms_by_termid":{"GO:0000404":null,"GO:0030983":null,"GO:0032136":null,"GO:0032137":null,"GO:0032138":null,"GO:0032141":null,"GO:0035485":null,"GO:0035486":null,"GO:0035487":null,"GO:0035488":null}}


id: GO:0019194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of sorbose from one side of a membrane to the other. Sorbose is the ketohexose xylo-2-hexulose; L-sorbose is formed by bacterial oxidation of sorbitol. Sorbose is produced commercially by fermentation and is used as an intermediate in the manufacture of ascorbic acid.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sorbose transmembrane transporter activity","secondary_identifiers":["GO:0019193"],"synonyms":[{"name":"sorbose porter activity","type":"exact"}],"termid":"GO:0019194"}


id: GO:0035905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ascending aorta over time, from its initial formation to the mature structure. The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta. In a two-pass circulatory system blood passes twice through the heart to supply the body once.","definition_xrefs":["GOC:dgh","UBERON:0001496","Wikipedia:Ascending_aorta","GOC:bf","MA:0002570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascending aorta development","termid":"GO:0035905"}


id: GO:0030516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, direction or extent of axon extension.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of extent of cell growth","termid":"GO:0061387"},{"relation_name":"regulates","term_name":"axon extension","termid":"GO:0048675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axon extension","termid":"GO:0030516"}


id: PBO:0090339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase","termid":"PBO:0090339"}


id: PBO:0049028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 15","termid":"PBO:0049028"}


id: PBO:0012006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion cytochrome c oxidase assembly protein Cox1102, mitochondrial ribosomal protein Rsm2202, fusion protein (predicted)","termid":"PBO:0012006"}


id: PBO:0003713
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INheritance of Peroxisomes","termid":"PBO:0003713"}


id: GO:0140266
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Peroxisome-derived dense-core vesicle that seals septal pores upon hyphal lysis to prevent excessive cytoplasmic loss. It is specific to several genera of filamentous ascomycetes.","definition_xrefs":["PMID:15155882","PMID:20707002","PMID:18227279","PMID:23882222","PMID:12640443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody","termid":"GO:0042579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Woronin body","termid":"GO:0140266"}


id: PBO:0079981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 19","termid":"PBO:0079981"}


id: PBO:0055171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2595","termid":"PBO:0055171"}


id: PBO:0108509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein Sym1, implicated in pyrimidine or lysine metabolism","termid":"PBO:0108509"}


id: PBO:0088863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Mgr2","termid":"PBO:0088863"}


id: PBO:0066596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member Q","termid":"PBO:0066596"}


id: GO:0042860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving achromobactin, a citrate siderophore.","definition_xrefs":["GOC:jl","PMID:10928541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"achromobactin metabolic process","synonyms":[{"name":"achromobactin metabolism","type":"exact"}],"termid":"GO:0042860"}


id: PBO:0050793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTR3E antisense RNA 1","termid":"PBO:0050793"}


id: GO:0140510
data:
  {"annotated_genes":["SJAG_04578","SJAG_01745","SJAG_03729","SJAG_01584","SJAG_04148","SJAG_03200","SJAG_00680","SJAG_01374","SJAG_04284"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86241,112509],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140512"},{"annotations":[112510,87050,106553,106517,112131,87435,92229,86242],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140599"},{"annotations":[89937],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140511"}]},"cv_name":"cellular_component","definition":"A narrow constricted region of the nucleus that forms around the anaphase spindle during closed mitosis, and connects the main portions of the newly forming daughter nuclei.","definition_xrefs":["PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_01374":null,"SJAG_01584":null,"SJAG_01745":null,"SJAG_03200":null,"SJAG_03729":null,"SJAG_04148":null,"SJAG_04284":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"mitotic nuclear bridge","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear bridge","type":"broad"}],"termid":"GO:0140510","terms_by_termid":{"GO:0140511":null,"GO:0140512":null,"GO:0140599":null}}


id: PBO:0109081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3105","termid":"PBO:0109081"}


id: PBO:0060867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 10","termid":"PBO:0060867"}


id: MOD:01989
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-tyrosine residue by a thioether bond to form 2-(S-L-cysteinyl)-D-tyrosine.","definition_xrefs":["PubMed:21526839","RESID:AA0626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(L-cystein-S-yl)-D-tyrosine","synonyms":[{"name":"(2R,5S)-2,5-diamino-5-carboxyl-6-(hydroxyphenyl)-4-thiahexanoic acid","type":"exact"},{"name":"(2S)-2-amino-2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-3-(4-hydroxyphenyl)propanoic acid","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-D-tyrosine","type":"exact"}],"termid":"MOD:01989"}


id: GO:0010465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with nerve growth factor (NGF), to prevent apoptosis in neurons and promote nerve growth, or to initiate a change in cell activity.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin receptor activity","termid":"GO:0005030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"nerve growth factor receptor activity","synonyms":[{"name":"NGF receptor activity","type":"exact"},{"name":"beta-nerve growth factor receptor activity","type":"exact"}],"termid":"GO:0010465"}


id: GO:0098993
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic vesicle membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of synaptic vesicle membrane (obsolete GO:0098993)","termid":"GO:0098993"}


id: GO:0097647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by amylin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:12037140","PMID:18687416","PMID:10871296","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor signaling pathway","termid":"GO:0097646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"amylin receptor signaling pathway","synonyms":[{"name":"amilyn receptor signalling pathway","type":"exact"}],"termid":"GO:0097647"}


id: PBO:0057773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2276","termid":"PBO:0057773"}


id: PBO:0050570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hornerin","termid":"PBO:0050570"}


id: PBO:0110315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insdc_protein_id","termid":"PBO:0110315"}


id: PBO:0048877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member C","termid":"PBO:0048877"}


id: GO:0035921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of a desmosome. A desmosome is a patch-like intercellular junction found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an space of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.","definition_xrefs":["GOC:vk","ISBN:0198506732","PMID:9182671","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desmosome organization","termid":"GO:0002934"},{"relation_name":"is_a","term_name":"cell-cell junction disassembly","termid":"GO:0150147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"desmosome disassembly","synonyms":[{"name":"desmosome dissociation","type":"exact"}],"termid":"GO:0035921"}


id: PBO:0058277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4654","termid":"PBO:0058277"}


id: PBO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase","termid":"PBO:0001460"}


id: PBO:0000599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD protein-1 Cph1","termid":"PBO:0000599"}


id: PBO:0005325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 7 Mft1 (predicted)","termid":"PBO:0005325"}


id: GO:0050606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-carboxy-2-hydroxymuconate semialdehyde hemiacetal + NADP+ = 2-oxo-2H-pyran-4,6-dicarboxylate + H+ + NADPH.","definition_xrefs":["RHEA:29587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4-carboxy-2-hydroxymuconate semialdehyde hemiacetal dehydrogenase activity","secondary_identifiers":["MetaCyc:1.2.1.45-RXN","EC:1.1.1.312","KEGG_REACTION:R04279"],"synonyms":[{"name":"2-hydroxy-4-carboxymuconate 6-semialdehyde dehydrogenase activity","type":"related"},{"name":"4-carboxy-2-hydroxy-cis,cis-muconate-6-semialdehyde:NADP(+) oxidoreductase activity","type":"related"},{"name":"4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-hydroxy-gamma-carboxymuconic epsilon-semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0050606"}


id: GO:0004799
data:
  {"annotated_genes":["SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85503],"is_not":false,"summary":null,"term":"GO:0004799"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dUMP = 7,8-dihydrofolate + thymidylate.","definition_xrefs":["EC:2.1.1.45","RHEA:12104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5,10-methylenetetrahydrofolate-dependent methyltransferase activity","termid":"GO:0042083"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"thymidylate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73605","KEGG_REACTION:R02101","MetaCyc:THYMIDYLATESYN-RXN"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:dUMP C-methyltransferase activity","type":"related"},{"name":"TMP synthetase activity","type":"related"},{"name":"dTMP synthase activity","type":"related"},{"name":"methylenetetrahydrofolate:dUMP C-methyltransferase activity","type":"related"},{"name":"thymidylate synthetase activity","type":"related"}],"termid":"GO:0004799","terms_by_termid":{"GO:0004799":null}}


id: PBO:0063700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase","termid":"PBO:0063700"}


id: PBO:0052550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor C3","termid":"PBO:0052550"}


id: GO:1902749
data:
  {"annotated_genes":["SJAG_01084","SJAG_00600","SJAG_01010","SJAG_02771","SJAG_00364","SJAG_01837","SJAG_02576","SJAG_03026","SJAG_00214","SJAG_04394","SJAG_02332","SJAG_00640","SJAG_02563","SJAG_01076","SJAG_01000","SJAG_04280","SJAG_03927","SJAG_03067","SJAG_03048","SJAG_03942","SJAG_00883","SJAG_01901","SJAG_04332","SJAG_01429","SJAG_02098","SJAG_02592","SJAG_01855","SJAG_02074","SJAG_04486","SJAG_02266","SJAG_03854","SJAG_01205","SJAG_01680","SJAG_03160","SJAG_01118","SJAG_03695","SJAG_03486","SJAG_03073","SJAG_01873","SJAG_02723","SJAG_04671","SJAG_04597","SJAG_01044","SJAG_03602","SJAG_01146","SJAG_00318","SJAG_02342","SJAG_00216","SJAG_03126","SJAG_03309","SJAG_02392","SJAG_06592","SJAG_02858","SJAG_04287","SJAG_04140","SJAG_05373","SJAG_03592","SJAG_00082","SJAG_01605","SJAG_01456","SJAG_01805","SJAG_00256","SJAG_00526","SJAG_00117"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112154,87532,102703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[96635,97534,86114,90514,112097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[96636,88622,95457,108130,99426,95291,103934,105413,85243,90044,113186,113356,112156,87533,90066,102706,112897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[112099,91957,90645,94540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[110355,85244,113783,87892,105414,84681,87534,107824,113105,95458,86330,90046,97153,102707,96637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[90474,107657,100591,103106,89016,107918,110561,89304,91959,108577,107527,89663,97097,104667,102740,110356,86115,112100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010972"},{"annotations":[107658,112101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"},{"annotations":[84183,97860,104669,106438,89904,112771,99596,112582,90477,88235,92434,103329,95099,90516,107293,90647,84192,94541,87832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[97485,83989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[90648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"},{"annotations":[98495,108061,107295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010389"}]},"cv_name":"biological_process","definition":"Any signaling pathway that modulates the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the cell cycle.","definition_xrefs":["GO_REF:0000058","GOC:jl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle phase transition","termid":"GO:1901987"},{"relation_name":"regulates","term_name":"cell cycle G2/M phase transition","termid":"GO:0044839"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00318":null,"SJAG_00364":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00640":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01456":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_01901":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02342":null,"SJAG_02392":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03126":null,"SJAG_03160":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03695":null,"SJAG_03854":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04486":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_05373":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of cell cycle G2/M phase transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902749","terms_by_termid":{"GO:0007095":null,"GO:0010389":null,"GO:0010971":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0033315":null,"GO:0044878":null,"GO:0110031":null,"GO:0110032":null,"GO:1905287":null}}


id: PR:P78920
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nap2 gene.","definition_xrefs":["UniProtKB:P78920","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein C2D10.11C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.11c","synonyms":[{"name":"Spom972h-nap2","type":"exact"}],"termid":"PR:P78920"}


id: GO:0106160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of small RNA loading onto RISC.","definition_xrefs":["GOC:ha","PMID:29775584"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of small RNA loading onto RISC (obsolete GO:0106160)","termid":"GO:0106160"}


id: PBO:0064903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP3CB antisense RNA 1 (head to head)","termid":"PBO:0064903"}


id: GO:1901577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alkane biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"regulates","term_name":"alkane biosynthetic process","termid":"GO:0043447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alkane biosynthetic process","synonyms":[{"name":"regulation of alkane anabolism","type":"exact"},{"name":"regulation of alkane biosynthesis","type":"exact"},{"name":"regulation of alkane formation","type":"exact"},{"name":"regulation of alkane synthesis","type":"exact"}],"termid":"GO:1901577"}


id: SO:1000110
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation that reverts the sequence of a previous frameshift mutation back to the initial frame.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000110 frame_restoring_sequence_variant (obsolete SO:1000110)","synonyms":[{"name":"frame restoring mutation","type":"exact"},{"name":"frame restoring sequence variant","type":"exact"}],"termid":"SO:1000110"}


id: PR:Q9P3A8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- knd1 gene.","definition_xrefs":["UniProtKB:Q9P3A8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin-associated NEDD8-dissociated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.07c","synonyms":[{"name":"Spom972h-knd1","type":"exact"},{"name":"cullin-associated and neddylation-dissociated protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3A8"}


id: PBO:0054410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1806","termid":"PBO:0054410"}


id: GO:2000175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pro-T cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"negative regulation of lymphoid progenitor cell differentiation","termid":"GO:1905457"},{"relation_name":"is_a","term_name":"regulation of pro-T cell differentiation","termid":"GO:2000174"},{"relation_name":"negatively_regulates","term_name":"pro-T cell differentiation","termid":"GO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of pro-T cell differentiation","synonyms":[{"name":"negative regulation of pro-T lymphocyte differentiation","type":"exact"}],"termid":"GO:2000175"}


id: PBO:0003458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad18 homolog Rhp18","termid":"PBO:0003458"}


id: GO:0060438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a trachea over time, from its formation to the mature structure. The trachea is the portion of the airway that attaches to the bronchi as it branches.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea development","termid":"GO:0060438"}


id: PBO:0073525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing 19","termid":"PBO:0073525"}


id: PBO:0004095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAF assembly factor (CAF-1) complex large subunit Pcf1","termid":"PBO:0004095"}


id: PBO:0031287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_regulation_phenotype","termid":"PBO:0031287"}


id: GO:0019608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.","definition_xrefs":["GOC:sm","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"nicotine metabolic process","termid":"GO:0018933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nicotine catabolic process","secondary_identifiers":["MetaCyc:P181-PWY","UM-BBD_pathwayID:nic"],"synonyms":[{"name":"nicotine breakdown","type":"exact"},{"name":"nicotine catabolism","type":"exact"},{"name":"nicotine degradation","type":"exact"}],"termid":"GO:0019608"}


id: PBO:0081321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 107","termid":"PBO:0081321"}


id: GO:1904888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cranial skeletal system over time, from its formation to the mature structure. The cranial skeletal system is the skeletal subdivision of the head, and includes the skull (cranium plus mandible), pharyngeal and/or hyoid apparatus.","definition_xrefs":["GO_REF:0000094","GOC:TermGenie","PMID:11262227","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial skeletal system development","synonyms":[{"name":"cranial skeleton development","type":"narrow"},{"name":"craniofacial development","type":"narrow"},{"name":"cranium development","type":"related"},{"name":"osteocranium development","type":"narrow"}],"termid":"GO:1904888"}


id: GO:0102676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: avenasterol + O2 + NADPH + H+ = 5-dehydroavenasterol + 2 H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete avenasterol-desaturase activity (obsolete GO:0102676)","termid":"GO:0102676"}


id: PBO:0030776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_ethanol","termid":"PBO:0030776"}


id: PBO:0061510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 ribosome biogenesis factor","termid":"PBO:0061510"}


id: PBO:0086955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of mitochondrial proline metabolism; tethered with Put7p to inner mitochondrial membrane in large hetero-oligomeric complex, abundance of which is regulated by proline; involved in mitochondrial proline homeostasis and cellular redox balance; null exhibits pronounced defect in proline utilization, and can be functionally complemented by expression of human homolog MCUR1","termid":"PBO:0086955"}


id: PBO:0058552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6131","termid":"PBO:0058552"}


id: PBO:0087213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-homocysteine methyltransferase; functions along with Mht1p in the conversion of S-adenosylmethionine (AdoMet) to methionine to control the methionine/AdoMet ratio; SAM4 has a paralog, YMR321C, that arose from a single-locus duplication","termid":"PBO:0087213"}


id: PBO:0043156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 24","termid":"PBO:0043156"}


id: PBO:0075527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E7, pseudogene","termid":"PBO:0075527"}


id: PBO:0083292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps 5' end of the essential gene SPT6","termid":"PBO:0083292"}


id: PBO:0084830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for transamination of isoleucine; but not of valine or leucine; may regulate specificity of branched-chain transaminases Bat1p and Bat2p; induction of expression in response to stress is mediated by a Hog1p-regulated antisense RNA and gene looping; interacts genetically with mitochondrial ribosomal protein genes; MMF1 has a paralog, HMF1, that arose from the whole genome duplication","termid":"PBO:0084830"}


id: GO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with leukotriene B4, LTB4, to initiate a change in cell activity. Leukotriene B4 is also known as (6Z, 8E, 10E, 14Z)-(5S, 12R)-5,12-dihydroxyicosa-6,8,10,14-tetraen-1-oate.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene receptor activity","termid":"GO:0004974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"leukotriene B4 receptor activity","synonyms":[{"name":"BLT receptor","type":"narrow"}],"termid":"GO:0001632"}


id: FYPO:0001567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular histidine level","synonyms":[{"name":"increased cellular L-histidine level","type":"exact"},{"name":"increased cellular histidine level during mitotic cell cycle","type":"related"},{"name":"increased cellular histidine level during vegetative growth","type":"exact"},{"name":"increased histidine accumulation","type":"related"}],"termid":"FYPO:0001567"}


id: GO:0050964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that contribute to electroception in which an electrical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of electrical stimulus involved in sensory perception","termid":"GO:0050963"},{"relation_name":"part_of","term_name":"electroception","termid":"GO:0050956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in electroception","synonyms":[{"name":"detection of electrical stimulus during electroreception","type":"related"},{"name":"electroception, detection of electrical stimulus","type":"exact"},{"name":"electroception, sensory detection of electrical stimulus","type":"exact"},{"name":"electroception, sensory transduction","type":"exact"},{"name":"electroception, sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory detection of electrical stimulus during electroception","type":"related"},{"name":"sensory transduction of electrical stimulus during electroception","type":"related"}],"termid":"GO:0050964"}


id: PBO:0040707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 like 12 pseudogene 1","termid":"PBO:0040707"}


id: PBO:0027669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-microtubules_present_in_increased_numbers","termid":"PBO:0027669"}


id: FYPO:0007189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sampangine. Cells stop growing (and may die) at a concentration of sampangine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to sampangine","synonyms":[{"name":"hypersensitive to sampangine","type":"exact"},{"name":"sensitive to sampangine during mitotic cell cycle","type":"related"},{"name":"sensitive to sampangine during vegetative growth","type":"exact"}],"termid":"FYPO:0007189"}


id: PBO:0060495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 1","termid":"PBO:0060495"}


id: GO:0085011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a Sec complex. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by Sec complex (obsolete GO:0085011)","synonyms":[{"name":"interaction with host via protein secreted by Sec secretion system","type":"exact"}],"termid":"GO:0085011"}


id: PR:Q09758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein-cysteine N-palmitoyltransferase HHAT-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-bound O-acyltransferase C24H6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.01c","secondary_identifiers":["UniProtKB:Q09758"],"synonyms":[{"name":"Spom972h-HHATL","type":"exact"}],"termid":"PR:Q09758"}


id: PBO:0046253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 2","termid":"PBO:0046253"}


id: PBO:0036224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_DNA_replication_initiation_resulting_in_complete_rereplication,_with_mitotic_cell_cycle_arrest","termid":"PBO:0036224"}


id: GO:2000185
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95495],"is_not":false,"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphate transmembrane transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate transport","termid":"GO:0010966"},{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"regulates","term_name":"phosphate ion transmembrane transport","termid":"GO:0035435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of phosphate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of phosphate membrane transport","type":"exact"}],"termid":"GO:2000185","terms_by_termid":{"GO:2000185":null}}


id: GO:0099554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of gaseous molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"},{"relation_name":"is_a","term_name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}


id: GO:0006677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide metabolic process","termid":"GO:0006672"},{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glycosylceramide metabolic process","synonyms":[{"name":"glycosylceramide metabolism","type":"exact"}],"termid":"GO:0006677"}


id: PBO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 5","termid":"PBO:0050188"}


id: PBO:0070115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 29 pseudogene","termid":"PBO:0070115"}


id: GO:0034345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of type III interferon production. Interferon lambda is the only member of the type III interferon found so far.","definition_xrefs":["GOC:add","PMID:15546383","PMID:16734557","ISBN:0126896631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of type III interferon production","termid":"GO:0034344"},{"relation_name":"negatively_regulates","term_name":"type III interferon production","termid":"GO:0034343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of type III interferon production","synonyms":[{"name":"down regulation of type III interferon production","type":"exact"},{"name":"down-regulation of type III interferon production","type":"exact"},{"name":"downregulation of type III interferon production","type":"exact"},{"name":"inhibition of type III interferon production","type":"narrow"},{"name":"negative regulation of type III IFN production","type":"exact"}],"termid":"GO:0034345"}


id: FYPO:0001484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A chemical response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to a nutrient is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cellular response to nutrient","synonyms":[{"name":"abnormal cellular response to nutrient during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to nutrient during vegetative growth","type":"exact"}],"termid":"FYPO:0001484"}


id: SO:0001390
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified cysteine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_cysteine","secondary_identifiers":["MOD:00905"],"synonyms":[{"name":"ModCys","type":"exact"},{"name":"modified L cysteine","type":"exact"},{"name":"modified L-cysteine","type":"exact"}],"termid":"SO:0001390"}


id: PBO:0017527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLI interacting factor family phosphatase Psr1 (predicted)","termid":"PBO:0017527"}


id: PBO:0079603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2F-SCLY readthrough (NMD candidate)","termid":"PBO:0079603"}


id: PBO:0061882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein family member 4B","termid":"PBO:0061882"}


id: GO:0070892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with lipoteichoic acid and transmitting the signal to initiate an innate immune response.","definition_xrefs":["GOC:add","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"lipoteichoic acid immune receptor activity","synonyms":[{"name":"lipoteichoic acid receptor activity","type":"broad"}],"termid":"GO:0070892"}


id: PBO:0050635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 1","termid":"PBO:0050635"}


id: GO:0036271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylphenidate stimulus.","definition_xrefs":["Wikipedia:Methylphenidate","GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methylphenidate","synonyms":[{"name":"response to MPD","type":"exact"},{"name":"response to MPH","type":"exact"},{"name":"response to ritalin","type":"exact"}],"termid":"GO:0036271"}


id: PBO:0061386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 46","termid":"PBO:0061386"}


id: GO:1990822
data:
  {"annotated_genes":["SJAG_01336","SJAG_04715","SJAG_00877","SJAG_03256","SJAG_03400","SJAG_01636","SJAG_04983","SJAG_00051","SJAG_02716","SJAG_02029","SJAG_04725","SJAG_01923"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63520,84573,93457,100125,100126,100127,100128],"is_not":false,"summary":null,"term":"GO:1990822"},{"annotations":[86512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[90701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[99938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[94923,62675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[93473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[99942,98905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[99943,106120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of basic amino acids from one side of a membrane to the other.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"basic amino acid transport","termid":"GO:0015802"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01336":null,"SJAG_01636":null,"SJAG_01923":null,"SJAG_02029":null,"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04715":null,"SJAG_04725":null,"SJAG_04983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"basic amino acid transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1990822","terms_by_termid":{"GO:0034488":null,"GO:0034490":null,"GO:0089708":null,"GO:0090513":null,"GO:0090517":null,"GO:0090518":null,"GO:1901482":null,"GO:1903826":null,"GO:1990822":null}}


id: PR:Q9P546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps002 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ698.02c","synonyms":[{"name":"Spom972h-rps002","type":"exact"}],"termid":"PR:Q9P546"}


id: MOD:01314
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(1)H,4x(12)C-labeled N6-succinyl-L-lysine.","definition_xrefs":["PubMed:12716131","PubMed:11857757","Unimod:64#K","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"N6-succinyl-L-lysine","termid":"MOD:01819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"4x(1)H,4x(12)C-labeled N6-succinyl-L-lysine","synonyms":[{"name":"Succinic anhydride labeling reagent light form (K)","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:01314"}


id: PBO:0076881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 30","termid":"PBO:0076881"}


id: GO:1904403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nocodazole stimulus.","definition_xrefs":["PMID:17822405","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to nocodazole","termid":"GO:1904402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nocodazole","termid":"GO:1904403"}


id: PBO:0090119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk13","termid":"PBO:0090119"}


id: GO:1905765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protection from non-homologous end joining at telomere.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF_telomere","PMID:14690602","GOC:nc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere capping","termid":"GO:1904354"},{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance in response to DNA damage","termid":"GO:1904506"},{"relation_name":"is_a","term_name":"regulation of protection from non-homologous end joining at telomere","termid":"GO:1905764"},{"relation_name":"negatively_regulates","term_name":"protection from non-homologous end joining at telomere","termid":"GO:0031848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"negative regulation of protection from non-homologous end joining at telomere","synonyms":[{"name":"down regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"down regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"down-regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"down-regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"downregulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"downregulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"inhibition of protection from NHEJ-mediated telomere fusion","type":"narrow"},{"name":"inhibition of protection from non-homologous end joining at telomere","type":"narrow"},{"name":"negative regulation of protection from NHEJ-mediated telomere fusion","type":"exact"}],"termid":"GO:1905765"}


id: PBO:0048668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrokine 3, pseudogene","termid":"PBO:0048668"}


id: PBO:0089400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic meiotic pumilio family RNA-binding protein Mpf1","termid":"PBO:0089400"}


id: GO:1903992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein stabilization.","definition_xrefs":["PMID:18573880","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein stabilization (obsolete GO:1903992)","synonyms":[{"name":"regulation of lysosomal protein stabilization","type":"narrow"},{"name":"regulation of positive regulation of protein stability","type":"exact"},{"name":"regulation of protein sequestering","type":"related"},{"name":"regulation of protein stabilization","type":"exact"},{"name":"regulation of protein stabilization activity","type":"related"}],"termid":"GO:1903992"}


id: PBO:0056033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphotoxin beta","termid":"PBO:0056033"}


id: PBO:0087485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cohesin loading factor (Scc2p-Scc4p); a complex required for loading of cohesin complexes onto chromosomes; involved in establishing sister chromatid cohesion during DSB repair via histone H2AX; promotes gene expression program that supports translational fidelity; evolutionarily-conserved adherin; relocalizes to cytosol in response to hypoxia; human disorder Cornelia de Lange syndrome is caused by mutations in NIPBL, the human ortholog of SCC2; conserved role in NHEJ","termid":"PBO:0087485"}


id: GO:1901596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reversine stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to reversine","termid":"GO:1901596"}


id: PBO:0087422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit alpha of assimilatory sulfite reductase; complex converts sulfite into sulfide","termid":"PBO:0087422"}


id: PBO:0065587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 3","termid":"PBO:0065587"}


id: PR:Q96WU9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCPB16A4.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96WU9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB16A4.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB16A4.06c","synonyms":[{"name":"Spom972h-SPCPB16A4.06c","type":"exact"}],"termid":"PR:Q96WU9"}


id: PBO:0014600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triman, ribonuclease involved in priRNA formation Tri1","termid":"PBO:0014600"}


id: PBO:0002135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec62 (predicted)","termid":"PBO:0002135"}


id: PBO:0056861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIB E3 ubiquitin protein ligase 1","termid":"PBO:0056861"}


id: GO:0042470
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.","definition_xrefs":["PMID:11584301","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"melanosome","secondary_identifiers":["Wikipedia:Melanosome"],"termid":"GO:0042470"}


id: GO:0090459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of aspartate within a cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular aspartate homeostasis","synonyms":[{"name":"aspartate homeostasis","type":"exact"},{"name":"cellular aspartate homeostasis","type":"exact"}],"termid":"GO:0090459"}


id: PBO:0058872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9983","termid":"PBO:0058872"}


id: GO:0004973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-methyl-D-aspartate receptor-associated protein activity (obsolete GO:0004973)","synonyms":[{"name":"N-methyl-D-aspartate receptor-associated protein activity","type":"exact"}],"termid":"GO:0004973"}


id: PBO:0004866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine carboxypeptidase (predicted)","termid":"PBO:0004866"}


id: GO:0000965
data:
  {"annotated_genes":["SJAG_06586","SJAG_02288","SJAG_04885","SJAG_02991","SJAG_01704","SJAG_00997"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95054,110523],"is_not":false,"summary":null,"term":"GO:0000965"},{"annotations":[113993,79177,83872,105995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of an RNA molecule transcribed from a mitochondrial genome; occurs in the mitochondrion.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA processing","termid":"GO:0000963"},{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02991":null,"SJAG_04885":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0140053"],"is_obsolete":false,"name":"mitochondrial RNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial RNA 3' end processing","type":"related"}],"termid":"GO:0000965","terms_by_termid":{"GO:0000965":null,"GO:1990180":null}}


id: GO:0070384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the Harderian gland over time, from its formation to the mature structure. The Harderian gland is an anterior orbital structure usually associated with the nictitating membrane, and produces and secretes a variety of substances to the eye, depending upon the species.","definition_xrefs":["GOC:hjd","PMID:7559104","PMID:16856596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Harderian gland development","termid":"GO:0070384"}


id: GO:0060444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the mammary gland duct is generated and organized. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching morphogenesis of an epithelial tube","termid":"GO:0048754"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in mammary gland duct morphogenesis","synonyms":[{"name":"mammary gland branching morphogenesis","type":"exact"}],"termid":"GO:0060444"}


id: _global:molecular_interaction_relation_helper_property
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"interaction_relation_helper_property","termid":"_global:interaction_relation_helper_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molecular_interaction_relation_helper_property","secondary_identifiers":["RO:0002564"],"termid":"_global:molecular_interaction_relation_helper_property"}


id: PBO:0060666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDC80 kinetochore complex component","termid":"PBO:0060666"}


id: SO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that codes for a 2A self-cleaving polypeptide region, which is a region that can result in a break in the peptide sequence at its terminal G-P junction.","definition_xrefs":["PMID:22301656","PMID:28526819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"2A_self_cleaving_peptide_region","synonyms":[{"name":"2A polypeptide region","type":"related"},{"name":"2A self-cleaving polypeptide region","type":"related"}],"termid":"SO:0002224"}


id: FYPO:0000808
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115205],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000356"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which lipid droplet organization is abnormal. Lipid droplet organization results in the assembly, arrangement of constituent parts, or disassembly of a lipid droplet.","definition_xrefs":["PomBase:mah","GO:0034389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00426":null},"genotype_count":1,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal lipid droplet organization","references_by_uniquename":{"PMID:25318672":null},"single_locus_annotated_genes":["SJAG_00426"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal lipid droplet organisation","type":"exact"},{"name":"abnormal lipid droplet organization during mitotic cell cycle","type":"related"},{"name":"abnormal lipid droplet organization during vegetative growth","type":"exact"},{"name":"abnormal lipid particle organization","type":"exact"}],"termid":"FYPO:0000808","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0000356":null,"FYPO_EXT:0000001":null}}


id: GO:0035818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the amount of urine excreted over a unit of time, as a result of pressure natriuresis.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pressure natriuresis","termid":"GO:0003095"},{"relation_name":"is_a","term_name":"positive regulation of urine volume","termid":"GO:0035810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urine volume by pressure natriuresis","synonyms":[{"name":"diuresis resulting from pressure natriuresis","type":"related"}],"termid":"GO:0035818"}


id: GO:0001842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural fold is formed. The edges of the neural plate thicken and move up to form a U-shaped structure called the neural groove.","definition_xrefs":["GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"primary neural tube formation","termid":"GO:0014020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural fold formation","synonyms":[{"name":"neural groove formation","type":"related"}],"termid":"GO:0001842"}


id: PBO:0042745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPS-CORT readthrough","termid":"PBO:0042745"}


id: GO:0015766
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[91878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of disaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Disaccharides are sugars composed of two monosaccharide units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"disaccharide transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015766","terms_by_termid":{"GO:0106081":null,"GO:0106082":null}}


id: PBO:0062728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 2","termid":"PBO:0062728"}


id: GO:0009608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a symbiont, an organism living with an organism of a different species in close physical association. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198506732","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to symbiont","synonyms":[{"name":"response of host to symbiont","type":"related"}],"termid":"GO:0009608"}


id: PBO:0073429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a, subunit 3 pseudogene 1","termid":"PBO:0073429"}


id: PR:O94509
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamyl-tRNA(Gln) amidotransferase subunit A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02639","PRO:DNx","PANTHER:PTHR11895:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.03","secondary_identifiers":["UniProtKB:O94509"],"synonyms":[{"name":"Glu-AdT subunit A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-QRSL1","type":"exact"}],"termid":"PR:O94509"}


id: PBO:0045141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 10","termid":"PBO:0045141"}


id: GO:2001306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipoxin B4. Lipoxin B4 is a C20 hydroxy fatty acid having (5S)-, (14R)- and (15S)-hydroxy groups as well as (6E)- (8Z)-, (10E)- and (12E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"},{"relation_name":"is_a","term_name":"lipoxin biosynthetic process","termid":"GO:2001301"},{"relation_name":"is_a","term_name":"lipoxin B4 metabolic process","termid":"GO:2001304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipoxin B4 biosynthetic process","synonyms":[{"name":"LXB4 anabolism","type":"exact"},{"name":"LXB4 biosynthesis","type":"exact"},{"name":"LXB4 biosynthetic process","type":"exact"},{"name":"LXB4 formation","type":"exact"},{"name":"LXB4 synthesis","type":"exact"},{"name":"lipoxin B4 anabolism","type":"exact"},{"name":"lipoxin B4 biosynthesis","type":"exact"},{"name":"lipoxin B4 formation","type":"exact"},{"name":"lipoxin B4 synthesis","type":"exact"}],"termid":"GO:2001306"}


id: PBO:0082306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartic beta semi-aldehyde dehydrogenase; catalyzes the second step in the common pathway for methionine and threonine biosynthesis; expression regulated by Gcn4p and the general control of amino acid synthesis","termid":"PBO:0082306"}


id: GO:0039022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric duct over time, from its formation to the mature structure. The pronephric duct collects the filtrate from the pronephric tubules and opens to the exterior of the pronephric kidney.","definition_xrefs":["ZFA:0000150","PMID:15647339","XAO:0000063","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephric duct development","termid":"GO:0072176"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric duct development","termid":"GO:0039022"}


id: GO:0070637
data:
  {"annotated_genes":["SJAG_04693","SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[109195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[104599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any pyridine nucleoside, a nucleoside in which a pyridine base covalently bonded to a sugar, usually ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03096":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyridine nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleoside metabolism","type":"exact"}],"termid":"GO:0070637","terms_by_termid":{"GO:0046495":null,"GO:0071590":null,"GO:0071592":null}}


id: GO:1901421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to alcohol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to alcohol","termid":"GO:1901419"},{"relation_name":"positively_regulates","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to alcohol","synonyms":[{"name":"activation of response to alcohol","type":"narrow"},{"name":"up regulation of response to alcohol","type":"exact"},{"name":"up-regulation of response to alcohol","type":"exact"},{"name":"upregulation of response to alcohol","type":"exact"}],"termid":"GO:1901421"}


id: PBO:0046156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 4","termid":"PBO:0046156"}


id: PBO:0066931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 233","termid":"PBO:0066931"}


id: FYPO:0007481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an increase in the transcription of one or more target genes that would normally occur when cells are subjected to a stress in the presence of a specific small molecule occurs to a lower extent than normal under the same circumstances.","definition_xrefs":["PomBase:mah","PMID:31932483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"attenuated increase in transcription during cellular response to stress in presence of small molecule","synonyms":[{"name":"attenuated increase in transcription during cellular response to stress in presence of small molecule during mitotic cell cycle","type":"related"},{"name":"attenuated increase in transcription during cellular response to stress in presence of small molecule during vegetative growth","type":"exact"}],"termid":"FYPO:0007481"}


id: PR:O60125
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bag101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator 1A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.11c","synonyms":[{"name":"BAG-1A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bag101","type":"exact"}],"termid":"PR:O60125"}


id: PBO:0065117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C theta","termid":"PBO:0065117"}


id: GO:0102965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acyl-CoA + 2 H+ + 2 NADPH = a long-chain primary fatty alcohol + CoA + 2 NADP+. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:pz","RHEA:52716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"alcohol-forming long-chain fatty acyl-CoA reductase activity","secondary_identifiers":["EC:1.2.1.84","MetaCyc:RXN-9344"],"synonyms":[{"name":"alcohol-forming fatty acyl-CoA reductase activity","type":"broad"}],"termid":"GO:0102965"}


id: MOD:01319
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:11510821","PubMed:9448752","Unimod:176#H","PubMed:12422359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Michael addition of BHT quinone methide to cysteine and lysine","termid":"MOD:00534"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of BHT quinone methide to histidine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:01319"}


id: PBO:0113407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of vacuolar transporter chaperone (VTC) complex; involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion; important regulator of substrate invagination from the vacuolar membrane; targeted to vacuole via AP-3 pathway; VTC3 has a paralog, VTC2, that arose from the whole genome duplication","termid":"PBO:0113407"}


id: PBO:0082808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of yeast cortical actin cytoskeleton; binds and cross links actin filaments; originally identified by its homology to calponin (contains a calponin-like repeat) but the Scp1p domain structure is more similar to transgelin","termid":"PBO:0082808"}


id: PBO:0087517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved ssDNA binding protein involved in DNA replication, repair, and recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; promotes recruitment, helicase and nuclease activities of Dna2p; role in DNA catenation/decatenation pathway of chromosome disentangling; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087517"}


id: RO:0002217
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x actively participates in y if and only if x participates in y and x realizes some active role","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in","termid":"RO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actively_participates_in","termid":"RO:0002217"}


id: GO:0005901
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane raft that forms small pit, depression, or invagination that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Examples include flask-shaped invaginations of the plasma membrane in adipocytes associated with caveolin proteins, and minute pits or incuppings of the cell membrane formed during pinocytosis. Caveolae may be pinched off to form free vesicles within the cytoplasm.","definition_xrefs":["GOC:mah","ISBN:0721662544","PMID:16645198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane raft","termid":"GO:0044853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"caveola","secondary_identifiers":["Wikipedia:Caveolae","GO:0016599"],"synonyms":[{"name":"caveolae","type":"exact"},{"name":"caveolar membrane","type":"related"}],"termid":"GO:0005901"}


