# terms

id: PBO:0084275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; required for the fusion of ER-derived COPII transport vesicles with the Golgi; interacts with Yip1p and Yos1p; localizes to the Golgi, the ER, and COPII vesicles; homolog of human YIPF3","termid":"PBO:0084275"}


id: GO:0032140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a single adenine insertion or a deletion that results in an unpaired adenine.","definition_xrefs":["GOC:vk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single base insertion or deletion binding","termid":"GO:0032138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"single adenine insertion binding","termid":"GO:0032140"}


id: PBO:0071577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 6","termid":"PBO:0071577"}


id: PBO:0055335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2763","termid":"PBO:0055335"}


id: PBO:0060434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAC alpha domain containing","termid":"PBO:0060434"}


id: FYPO:0006282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is decreased at chromosome arms.","definition_xrefs":["PMID:28977643","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic recombination","termid":"FYPO:0000482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitotic recombination at chromosome arms","termid":"FYPO:0006282"}


id: MOD:00717
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to a methylated phenylalanine, such as N-methyl-L-phenylalanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated phenylalanine","synonyms":[{"name":"MePhe","type":"exact"}],"termid":"MOD:00717"}


id: PBO:0034665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thin_stable_microtubule_bundle","termid":"PBO:0034665"}


id: GO:0017057
data:
  {"annotated_genes":["SJAG_01824","SJAG_02647"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101622,111419],"is_not":false,"summary":null,"term":"GO:0017057"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-O-phosphono-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate + H+.","definition_xrefs":["EC:3.1.1.31","RHEA:12556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01824":null,"SJAG_02647":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"6-phosphogluconolactonase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:6PGLUCONOLACT-RXN","Reactome:R-HSA-71296","KEGG_REACTION:R02035"],"synonyms":[{"name":"6-PGL","type":"related"},{"name":"6-phospho-D-glucono-1,5-lactone lactonohydrolase activity","type":"related"},{"name":"phosphogluconolactonase activity","type":"related"}],"termid":"GO:0017057","terms_by_termid":{"GO:0017057":null}}


id: PBO:0063196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 18","termid":"PBO:0063196"}


id: GO:0032028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the head/neck region of a myosin heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0008092","GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"myosin head/neck binding","termid":"GO:0032028"}


id: GO:0006298
data:
  {"annotated_genes":["SJAG_02187","SJAG_04410","SJAG_01832","SJAG_02261","SJAG_02039","SJAG_01807","SJAG_02748","SJAG_01620","SJAG_04190","SJAG_01887","SJAG_03722","SJAG_01049","SJAG_01262","SJAG_02226","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84425,84728,87859,90970,96681,100329,100661,102020,102153,103854,111767,112350,112536,113224],"is_not":false,"summary":null,"term":"GO:0006298"},{"annotations":[103853,87858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000710"},{"annotations":[94230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070716"},{"annotations":[94232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990516"}]},"cv_name":"biological_process","definition":"A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.","definition_xrefs":["ISBN:0198506732","PMID:11687886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01049":null,"SJAG_01262":null,"SJAG_01419":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_01832":null,"SJAG_01887":null,"SJAG_02039":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02261":null,"SJAG_02748":null,"SJAG_03722":null,"SJAG_04190":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"mismatch repair","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:DNA_mismatch_repair","GO:0006300"],"synonyms":[{"name":"MMR","type":"exact"},{"name":"MutS/MutL/MutH pathway","type":"related"},{"name":"long patch mismatch repair system","type":"narrow"},{"name":"mismatch repair, MutL-like pathway","type":"related"}],"termid":"GO:0006298","terms_by_termid":{"GO:0000710":null,"GO:0006298":null,"GO:0070716":null,"GO:1990516":null}}


id: RO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x 'has habitat' y if and only if: x is an organism, y is a habitat, and y can sustain and allow the growth of a population of xs.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_habitat","termid":"RO:0002303"}


id: PBO:0051448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 4-60","termid":"PBO:0051448"}


id: PBO:0067856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 158","termid":"PBO:0067856"}


id: PBO:0054485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1885","termid":"PBO:0054485"}


id: GO:0052468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of salicylic acid in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of salicylic acid levels in symbiont (obsolete GO:0052468)","synonyms":[{"name":"modulation by organism of salicylic acid levels in symbiont","type":"exact"}],"termid":"GO:0052468"}


id: MOD:00226
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to 1'-(8alpha-FAD)-L-histidine.","definition_xrefs":["Unimod:50#H","PubMed:9261083","PubMed:1396672","RESID:AA0221","DeltaMass:0","PubMed:4339951","PubMed:10585424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(8alpha-FAD)-L-histidine","synonyms":[{"name":"(S)-2-amino-3-(1-[8alpha riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]imidazol-4-yl)propanoic acid","type":"exact"},{"name":"1'-(8alpha-FAD)-L-histidine","type":"exact"},{"name":"8alpha-(N(epsilon)-histidyl)FAD","type":"exact"},{"name":"8alpha-(N1'-histidyl)FAD","type":"exact"},{"name":"8alpha-N3-histidyl FAD","type":"related"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES Tele-8alpha-FAD histidine","type":"exact"},{"name":"N theta and N pi-(8alpha-Flavin) (on Histidine)","type":"exact"},{"name":"N(tau)-(8alpha-FAD)-histidine","type":"exact"},{"name":"Nt8aFADHis","type":"exact"},{"name":"tele-(8alpha-FAD)-histidine","type":"exact"}],"termid":"MOD:00226"}


id: PR:Q9P3V0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf4 gene.","definition_xrefs":["UniProtKB:Q9P3V0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC548.03c","synonyms":[{"name":"Spom972h-wtf4","type":"exact"}],"termid":"PR:Q9P3V0"}


id: FYPO:0005493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the transport of proteins or other substances from the endosome to the Golgi is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vesicle-mediated transport during vegetative growth","termid":"FYPO:0006432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal endosome to Golgi transport","synonyms":[{"name":"normal endosome to Golgi protein transport","type":"narrow"},{"name":"normal endosome to Golgi transport during mitotic cell cycle","type":"related"},{"name":"normal endosome to Golgi transport during vegetative growth","type":"exact"},{"name":"normal retrograde transport, endosome to Golgi","type":"exact"}],"termid":"FYPO:0005493"}


id: PBO:0051202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-30-1","termid":"PBO:0051202"}


id: PBO:0002941
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.99.1.4","termid":"PBO:0002941"}


id: GO:0047256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + UDP-N-acetyl-alpha-D-glucosamine = a beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + H+ + UDP.","definition_xrefs":["RHEA:13905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9846501","MetaCyc:2.4.1.206-RXN","EC:2.4.1.206"],"synonyms":[{"name":"LA2 synthase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:D-galactosyl-1,4-beta-D-glucosylceramide beta-1,3-acetylglucosaminyltransferase activity","type":"related"},{"name":"beta1->3-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"lactosylceramide beta-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-lactosylceramide beta-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0047256"}


id: GO:0048098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the antennal joint over time, from its formation to the mature structure. The antennal joint is the joint between antennal segments.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"antennal development","termid":"GO:0007469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antennal joint development","termid":"GO:0048098"}


id: GO:0044784
data:
  {"annotated_genes":["SJAG_03353","SJAG_01297","SJAG_02169","SJAG_03327","SJAG_04259","SJAG_04999","SJAG_01956","SJAG_04699","SJAG_00666","SJAG_03048","SJAG_01330","SJAG_00883","SJAG_05329","SJAG_00145","SJAG_04573","SJAG_02498","SJAG_04884","SJAG_04853","SJAG_04126","SJAG_01515","SJAG_02451","SJAG_02380","SJAG_03126","SJAG_01679","SJAG_01082","SJAG_03575","SJAG_01837","SJAG_02336","SJAG_01805","SJAG_03681","SJAG_04968"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95686,103326,104350,111991,86835,99998,109883,108056,110363],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[110589,102399],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[102400,97897,112766],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[94797,96236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[96237,98393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[109230,97936,86462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007091"},{"annotations":[102401,106005,97898,110592,109887,95534,112769,111640,86837],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[94798],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[102402,111641],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045841"},{"annotations":[90305],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[109888],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[91264],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[112773],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[98211,93808,96238,110364,98486,89907,107468,110861],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[97435],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[90306],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid segregation","termid":"GO:0033045"},{"relation_name":"is_a","term_name":"cell cycle phase transition","termid":"GO:0044770"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01956":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03575":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04853":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"metaphase/anaphase transition of cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044784","terms_by_termid":{"GO:0007091":null,"GO:0007094":null,"GO:0033316":null,"GO:0045841":null,"GO:0045842":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902103":null,"GO:1902426":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990949":null,"GO:1990950":null}}


id: PBO:0046316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enkurin domain containing 1","termid":"PBO:0046316"}


id: PBO:0061303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase puromycin sensitive","termid":"PBO:0061303"}


id: FYPO:0005215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is decreased during mitotic M phase","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to kinetochore during vegetative growth","termid":"FYPO:0002902"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during mitotic M phase","termid":"FYPO:0008164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to kinetochore during mitotic M phase","synonyms":[{"name":"decreased protein localisation to kinetochore during mitosis","type":"exact"},{"name":"decreased protein localization to kinetochore during mitotic M phase","type":"related"},{"name":"decreased protein localization to kinetochore during mitotic nuclear division","type":"exact"},{"name":"reduced protein localization to kinetochore during mitosis","type":"exact"}],"termid":"FYPO:0005215"}


id: GO:0061314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell and contributing to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Notch signaling involved in heart development","synonyms":[{"name":"Notch signalling involved in heart development","type":"exact"}],"termid":"GO:0061314"}


id: GO:0002169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mitochondrial protein complex which is capable of 3-methylcrotonyl-CoA carboxylase activity. In mammals, at least, consists as a dodecamer of 6 alpha and 6 beta subunits. MCCC-alpha has a covalently bound biotin essential for the ATP-dependent carboxylation. MCCC-beta possesses carboxyltransferase activity which presumably is essential for binding to 3-methylcrotonyl-CoA.","definition_xrefs":["GOC:hjd","PMID:15868465","GOC:bf","PMID:22869039","PMID:17360195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"methylcrotonoyl-CoA carboxylase complex","termid":"GO:1905202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"3-methylcrotonyl-CoA carboxylase complex, mitochondrial","synonyms":[{"name":"mitochondrial 3-methylcrotonyl-CoA carboxylase holoenzyme","type":"exact"},{"name":"mitochondrial MCCC complex","type":"exact"},{"name":"mitochondrial methylcrotonoyl-CoA carboxylase complex","type":"exact"}],"termid":"GO:0002169"}


id: PBO:0065826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6A, member RAS oncogene family","termid":"PBO:0065826"}


id: GO:0045712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of salivary gland determination in a larval organism.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of salivary gland boundary specification","termid":"GO:0045706"},{"relation_name":"is_a","term_name":"regulation of larval salivary gland boundary specification","termid":"GO:0045708"},{"relation_name":"positively_regulates","term_name":"larval salivary gland boundary specification","termid":"GO:0007433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of larval salivary gland boundary specification","synonyms":[{"name":"activation of larval salivary gland determination","type":"narrow"},{"name":"positive regulation of larval salivary gland determination","type":"exact"},{"name":"stimulation of larval salivary gland determination","type":"narrow"},{"name":"up regulation of larval salivary gland determination","type":"exact"},{"name":"up-regulation of larval salivary gland determination","type":"exact"},{"name":"upregulation of larval salivary gland determination","type":"exact"}],"termid":"GO:0045712"}


id: PBO:0071977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 5","termid":"PBO:0071977"}


id: PATO:0000845
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000845 auditory ability (obsolete PATO:0000845)","termid":"PATO:0000845"}


id: PBO:0083342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene ATG16/YMR159C","termid":"PBO:0083342"}


id: PBO:0078318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta diversity 3","termid":"PBO:0078318"}


id: GO:1902117
data:
  {"annotated_genes":["SJAG_03851","SJAG_01837","SJAG_02332","SJAG_00718","SJAG_05289","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104748,104659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[98481,112772,85773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[107528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of organelle assembly.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"positively_regulates","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_02332":null,"SJAG_03048":null,"SJAG_03851":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of organelle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of organelle assembly","type":"narrow"},{"name":"up regulation of organelle assembly","type":"exact"},{"name":"up-regulation of organelle assembly","type":"exact"},{"name":"upregulation of organelle assembly","type":"exact"}],"termid":"GO:1902117","terms_by_termid":{"GO:0110161":null,"GO:1905561":null,"GO:2000786":null}}


id: GO:0032477
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric complex that possesses polyprenyl diphosphate synthase activity involved in the synthesis of the isoprenoid chain of ubiquinone whose length varies between organisms.","definition_xrefs":["PMID:14519123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyl diphosphate synthase complex","termid":"GO:0032476"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"homodimeric polyprenyl diphosphate synthase complex","synonyms":[{"name":"homodimeric decaprenyl diphosphate synthase complex","type":"narrow"}],"termid":"GO:0032477"}


id: PR:Q10279
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fur4 gene.","definition_xrefs":["UniProtKB:Q10279","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil permease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.03","synonyms":[{"name":"Spom972h-fur4","type":"exact"}],"termid":"PR:Q10279"}


id: PBO:0060999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHL repeat containing 4","termid":"PBO:0060999"}


id: FYPO:0004888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the telomere of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome","termid":"FYPO:0004996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to telomere","synonyms":[{"name":"abnormal protein localisation to chromosome, telomeric region","type":"exact"},{"name":"abnormal protein localisation to telomere","type":"exact"},{"name":"abnormal protein localization to chromosome, telomeric region","type":"exact"}],"termid":"FYPO:0004888"}


id: PBO:0036492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl5","termid":"PBO:0036492"}


id: GO:0102850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (9Z)-octadecenoyl-containing glycerolipid + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = a (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:46376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"acyl-lipid (n+3)-(Z)-desaturase (ferredoxin) activity","secondary_identifiers":["EC:1.14.19.23"],"synonyms":[{"name":"1-18:1-2-16:0-phosphatidylglycerol omega-6 desaturase activity","type":"exact"}],"termid":"GO:0102850"}


id: PBO:0001017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, Raptor homolog Mip1","termid":"PBO:0001017"}


id: GO:0015872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dopamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Dopamine is a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine transport","termid":"GO:0051937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"dopamine transport","termid":"GO:0015872"}


id: PBO:0064268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G2","termid":"PBO:0064268"}


id: PBO:0109357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JUN divergent transcript","termid":"PBO:0109357"}


id: PBO:0071817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 12","termid":"PBO:0071817"}


id: GO:0044633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the frequency, rate or extent of complement activation, via the alternative pathway, in a different organism.","definition_xrefs":["PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of complement activation, alternative pathway in another organism (obsolete GO:0044633)","synonyms":[{"name":"modulation of complement activation, alternative pathway in other organism","type":"exact"},{"name":"regulation of complement activation, alternative pathway in other organism","type":"related"}],"termid":"GO:0044633"}


id: PBO:0052931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-3","termid":"PBO:0052931"}


id: PATO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000506 absolute sensitivity value (obsolete PATO:0000506)","termid":"PATO:0000506"}


id: PBO:0034252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immediately_preceded_by","termid":"PBO:0034252"}


id: PBO:0017681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transmembrane transporter Amt3","termid":"PBO:0017681"}


id: PBO:0111440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mug28, implicated in mRNA processing","termid":"PBO:0111440"}


id: PR:Q09800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ime4 gene.","definition_xrefs":["UniProtKB:Q09800","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22G7.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.07c","synonyms":[{"name":"Spom972h-ime4","type":"exact"}],"termid":"PR:Q09800"}


id: PBO:0005411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-C (predicted)","termid":"PBO:0005411"}


id: PBO:0040026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 2","termid":"PBO:0040026"}


id: PBO:0034440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_Rad52_focus_presence_during_cellular_response_to_ionizing_radiation","termid":"PBO:0034440"}


id: PBO:0079990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 28","termid":"PBO:0079990"}


id: FYPO:0002227
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115206],"is_not":false,"summary":null,"term":"FYPO:0002227"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more triglycerides measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00426":null},"genotype_count":1,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular triglyceride level during vegetative growth","references_by_uniquename":{"PMID:25318672":null},"single_locus_annotated_genes":["SJAG_00426"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased cellular TAG level during vegetative growth","type":"exact"},{"name":"increased cellular triacylglycerol level during vegetative growth","type":"exact"},{"name":"increased cellular triglyceride level during mitotic cell cycle","type":"related"},{"name":"increased triglyceride accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002227","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO:0002227":null}}


id: PBO:0067924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 226","termid":"PBO:0067924"}


id: PBO:0059700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 8","termid":"PBO:0059700"}


id: PBO:0052524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 38","termid":"PBO:0052524"}


id: PR:Q9P3A7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transitional endoplasmic reticulum ATPase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00530","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle protein 48 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.08","secondary_identifiers":["UniProtKB:Q9P3A7"],"synonyms":[{"name":"Spom972h-VCP","type":"exact"}],"termid":"PR:Q9P3A7"}


id: PBO:0070315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 4","termid":"PBO:0070315"}


id: PBO:0053942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1243","termid":"PBO:0053942"}


id: PBO:0088793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Erd1 homolog","termid":"PBO:0088793"}


id: FYPO:0007064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any 22S rRNA precursor measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:29641590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rRNA precursor level","termid":"FYPO:0003600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased 22S rRNA precursor level","synonyms":[{"name":"increased 22S rRNA precursor accumulation","type":"related"},{"name":"increased 22S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"increased 22S rRNA precursor level during vegetative growth","type":"exact"},{"name":"increased 22S rRNA precursor transcript level","type":"exact"}],"termid":"FYPO:0007064"}


id: PBO:0039823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARFGEF family member 3","termid":"PBO:0039823"}


id: PR:000027533
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional regulator prz1 phosphorylated 1 in Schizosaccharomyces pombe. Example: UniProtKB:Q09838-1, MOD:00696.","definition_xrefs":["PMID:12637524","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional regulator prz1","termid":"PR:000027513"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prz1/PhosRes+","pombase_gene_id":"SPAC4G8.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: transcriptional regulator prz1 isoform 1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-prz1/iso:1/Phos:1","type":"exact"},{"name":"prz1/PhosRes+","type":"exact"}],"termid":"PR:000027533"}


id: PBO:0042415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 26 pseudogene 1","termid":"PBO:0042415"}


id: PBO:0031714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_transport","termid":"PBO:0031714"}


id: GO:0090724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The center of the migrating motile tip of a growing nerve cell axon or dendrite.","definition_xrefs":["PMID:16260607","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"central region of growth cone","termid":"GO:0090724"}


id: PBO:0067820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 122","termid":"PBO:0067820"}


id: FYPO:0009026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing methionine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0001985"],"is_obsolete":false,"name":"increased cell population growth on methionine nitrogen source","synonyms":[{"name":"increased growth on methionine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on methionine nitrogen source","type":"exact"}],"termid":"FYPO:0009026"}


id: PBO:0050809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUNK antisense RNA 1","termid":"PBO:0050809"}


id: PBO:0043811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPNE2 divergent transcript","termid":"PBO:0043811"}


id: GO:0060254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate frequency or extent of the covalent attachment of a palmitoyl group to the N-terminal amino acid residue of a protein.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein lipidation","termid":"GO:1903059"},{"relation_name":"regulates","term_name":"N-terminal protein palmitoylation","termid":"GO:0006500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of N-terminal protein palmitoylation","termid":"GO:0060254"}


id: MOD:00353
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-tryptophan residue with an L-tyrosine residue by a carbon-carbon bond, and cross-links the L-tyrosine residue to an L-methionine residue by a thioether bond to form S-[5'-(L-tryptoph-6'-yl)-L-tyrosin-3'-yl]-L-methionin-S-ium.","definition_xrefs":["RESID:AA0348","PubMed:12172540","PubMed:16285713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-[5'-(L-tryptoph-6'-yl)-L-tyrosin-3'-yl]-L-methionin-S-ium","synonyms":[{"name":"5'-(6'-tryptophyl)-tyrosin-3'-yl-methionin-S-ium","type":"exact"},{"name":"S-[5'-(L-tryptoph-6'-yl)-L-tyrosin-3'-yl]-L-methionin-S-ium","type":"exact"}],"termid":"MOD:00353"}


id: GO:0010586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving miRNA, microRNA, a class of single-stranded RNA molecules of about 21-23 nucleotides in length, which regulates gene expression.","definition_xrefs":["PMID:17993620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"miRNA metabolic process","synonyms":[{"name":"microRNA metabolic process","type":"exact"}],"termid":"GO:0010586"}


id: PBO:0028084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_pore_density","termid":"PBO:0028084"}


id: GO:0004808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminomethyl-2-thiouridine34 in tRNA + S-adenosyl-L-methionine = 5-methylaminomethyl-2-thiouridine34 in tRNA + H+ + S-adenosyl-L-homocysteine. This enzyme specifically adds the terminal methyl group of 5-[(methylamino)methyl]-2-thiouridylate.","definition_xrefs":["RHEA:19569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0140101","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00601","GO:0016425","EC:2.1.1.61","MetaCyc:RXN0-5144"],"synonyms":[{"name":"tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity","type":"exact"},{"name":"tRNA 5-methylaminomethyl-2-thiouridylate 5'-methyltransferase activity","type":"related"}],"termid":"GO:0004808"}


id: PBO:0038517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily F member 2","termid":"PBO:0038517"}


id: PBO:0072960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec1 family domain containing 2","termid":"PBO:0072960"}


id: PBO:0087426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit a of the vacuolar-ATPase V0 domain; encodes one of two isoforms, located in vacuolar V-ATPase complexes while STV1 encodes the second isoform and is located in Golgi and endosomal V-ATPase complexes; interaction with PI(3,5)P2 increases V-ATPase activity and contributes to hyperosmotic stress tolerance; relative distribution to the vacuolar membrane decreases upon DNA replication stress; human homolog ATP6V0A4 implicated in renal tubular acidosis, can complement yeast null mutant","termid":"PBO:0087426"}


id: GO:0034199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of the inactive enzyme protein kinase A.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of protein kinase activity","termid":"GO:0032147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of protein kinase A activity","synonyms":[{"name":"protein kinase A activation","type":"exact"}],"termid":"GO:0034199"}


id: PBO:0088073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease, deubiquitinates Ub-protein moieties; interacts with proteins that function in rRNA production and ribosome biogenesis via its intrinsically disordered regions; stabilizes Rpa190p by deubiquitination; controls PCNA deubiquitylation; may regulate silencing by acting on Sir4p; involved in posttranscriptionally regulating Gap1p, possibly other transporters; localized to the nucleolus; null mutant phenotypes are functionally complemented by human USP36","termid":"PBO:0088073"}


id: GO:0160032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that generates the active Toll receptor ligand and consists of the cascade of enzymatic reactions initiated by extracellular recognition factors, leading to the cleavage of the inactive form of spatzle family of ligands.","definition_xrefs":["PMID:23632253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"Toll receptor ligand protein activation cascade","termid":"GO:0160032"}


id: PBO:0073276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 10 pseudogene 1","termid":"PBO:0073276"}


id: FYPO:0001065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of threonine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal threonine import","synonyms":[{"name":"abnormal L-threonine import","type":"exact"},{"name":"abnormal L-threonine import across plasma membrane","type":"exact"},{"name":"abnormal threonine import during mitotic cell cycle","type":"related"},{"name":"abnormal threonine import during vegetative growth","type":"exact"},{"name":"abnormal threonine import into cell","type":"exact"},{"name":"abnormal threonine uptake","type":"exact"}],"termid":"FYPO:0001065"}


id: PBO:0041561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 73","termid":"PBO:0041561"}


id: GO:0052508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of symbiont salicylic acid-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway (obsolete GO:0052508)","synonyms":[{"name":"activation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"activation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052508"}


id: GO:0072292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to metanephric proximal tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in proximal tubule morphogenesis","termid":"GO:0072159"},{"relation_name":"is_a","term_name":"epithelial cell migration involved in metanephric nephron tubule morphogenesis","termid":"GO:0072290"},{"relation_name":"part_of","term_name":"metanephric proximal tubule morphogenesis","termid":"GO:0072288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in metanephric proximal tubule morphogenesis","termid":"GO:0072292"}


id: PBO:0000884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein (predicted)","termid":"PBO:0000884"}


id: PBO:0001099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C5HC2 type","termid":"PBO:0001099"}


id: GO:1904553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemotaxis to arachidonic acid.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16382163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of chemotaxis to arachidonic acid","termid":"GO:1904552"},{"relation_name":"negatively_regulates","term_name":"chemotaxis to arachidonic acid","termid":"GO:0034670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemotaxis to arachidonic acid","synonyms":[{"name":"down regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"down-regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"downregulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"inhibition of chemotaxis to arachidonic acid","type":"narrow"}],"termid":"GO:1904553"}


id: PBO:0054388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1784","termid":"PBO:0054388"}


id: GO:0050030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-pipecolate + acceptor = delta1-piperideine-6-carboxylate + reduced acceptor. Delta1-piperideine-6-carboxylate is also known as 2,3,4,5-tetrahydropyridine-2-carboxylate.","definition_xrefs":["EC:1.5.99.3","MetaCyc:L-PIPECOLATE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-pipecolate dehydrogenase activity","secondary_identifiers":["RHEA:19777"],"synonyms":[{"name":"L-pipecolate:(acceptor) 1,6-oxidoreductase activity","type":"related"},{"name":"L-pipecolate:acceptor 1,6-oxidoreductase activity","type":"related"}],"termid":"GO:0050030"}


id: PBO:0071039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 41","termid":"PBO:0071039"}


id: GO:1990381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ubiquitin-specific protease.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:24063750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protease binding","termid":"GO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"ubiquitin-specific protease binding","synonyms":[{"name":"deubiquitinase binding","type":"exact"},{"name":"deubiquitinating enzyme binding","type":"exact"}],"termid":"GO:1990381"}


id: GO:0042174
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042173"},{"relation_name":"is_a","term_name":"negative regulation of sporulation","termid":"GO:0043939"},{"relation_name":"negatively_regulates","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of sporulation","type":"exact"},{"name":"down-regulation of sporulation","type":"exact"},{"name":"downregulation of sporulation","type":"exact"},{"name":"inhibition of sporulation","type":"narrow"}],"termid":"GO:0042174","terms_by_termid":{"GO:0075297":null}}


id: PBO:0035761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_tyrosine","termid":"PBO:0035761"}


id: PBO:0046775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosin like glycosyltransferase 1","termid":"PBO:0046775"}


id: GO:0019569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-arabinose into other compounds, including xylulose 5-phosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-arabinose catabolic process","termid":"GO:0019572"},{"relation_name":"is_a","term_name":"xylulose 5-phosphate biosynthetic process","termid":"GO:1901159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"L-arabinose catabolic process to xylulose 5-phosphate","secondary_identifiers":["MetaCyc:ARABCAT-PWY"],"synonyms":[{"name":"L-arabinose breakdown to xylulose 5-phosphate","type":"exact"},{"name":"L-arabinose degradation to xylulose 5-phosphate","type":"exact"}],"termid":"GO:0019569"}


id: PBO:0043247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 7","termid":"PBO:0043247"}


id: PBO:0054560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1962","termid":"PBO:0054560"}


id: PBO:0036404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anamorsin family iron-sulfur cluster protein Dre2 (predicted)","termid":"PBO:0036404"}


id: PBO:0110335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V1F pseudogene 1","termid":"PBO:0110335"}


id: GO:0022818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the active transport of a sodium ion across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"membrane potential driven uniporter activity","termid":"GO:0022810"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sodium ion uniporter activity","termid":"GO:0022818"}


id: PATO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A diameter that is along the anterior-posterior axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diameter","termid":"PATO:0001334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior-posterior diameter","termid":"PATO:0002041"}


id: PBO:0079886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B like 3, pseudogene","termid":"PBO:0079886"}


id: FYPO:0001086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glucosyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal glucosyltransferase activity","termid":"FYPO:0001086"}


id: FYPO:0000954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing nickel cations.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on nickel cation","synonyms":[{"name":"normal cell population growth in presence of nickel cations","type":"exact"},{"name":"normal cell population growth on nickel","type":"exact"},{"name":"normal cell population growth on nickel cation","type":"exact"},{"name":"normal cellular response to nickel cation","type":"related"},{"name":"normal vegetative cell population growth on nickel cation","type":"exact"}],"termid":"FYPO:0000954"}


id: PBO:0044824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 110","termid":"PBO:0044824"}


id: PBO:0077681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 12","termid":"PBO:0077681"}


id: PBO:0060800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 6","termid":"PBO:0060800"}


id: PBO:0042782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 120","termid":"PBO:0042782"}


id: GO:1902359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any Notch signaling pathway that is involved in somitogenesis.","definition_xrefs":["GOC:TermGenie","PMID:21795391","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"part_of","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Notch signaling pathway involved in somitogenesis","synonyms":[{"name":"N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"N signaling pathway involved in somitogenesis","type":"exact"},{"name":"N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"N signalling pathway involved in somitogenesis","type":"exact"},{"name":"Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"Notch-receptor signalling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:1902359"}


id: PBO:0076229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT20 homolog, SAGA complex component","termid":"PBO:0076229"}


id: FYPO:0001108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione-disulfide reductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutathione-disulfide reductase activity","termid":"FYPO:0001106"},{"relation_name":"is_a","term_name":"increased glutathione disulfide oxidoreductase activity","termid":"FYPO:0003965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000652","FYPO:0005447","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased glutathione-disulfide reductase activity","synonyms":[{"name":"increased glutathione-disulphide reductase activity","type":"exact"}],"termid":"FYPO:0001108"}


id: PBO:0040429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V0E2 antisense RNA 1","termid":"PBO:0040429"}


id: PBO:0002661
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein Intermediate light chain-Like","termid":"PBO:0002661"}


id: GO:1905073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tight junction disassembly.","definition_xrefs":["GOC:rl","GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:18718461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"tight junction disassembly","termid":"GO:1905071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tight junction disassembly","synonyms":[{"name":"regulation of occluding cell junction disassembly","type":"exact"},{"name":"regulation of occluding junction disassembly","type":"exact"}],"termid":"GO:1905073"}


id: PBO:0030319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_oleoyl-CoA_ligase_activity","termid":"PBO:0030319"}


id: GO:0030511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta receptor signaling pathway","termid":"GO:0017015"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090100"},{"relation_name":"is_a","term_name":"positive regulation of cellular response to transforming growth factor beta stimulus","termid":"GO:1903846"},{"relation_name":"positively_regulates","term_name":"transforming growth factor beta receptor signaling pathway","termid":"GO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transforming growth factor beta receptor signaling pathway","synonyms":[{"name":"activation of transforming growth factor beta receptor signaling pathway","type":"narrow"},{"name":"positive regulation of TGF-beta receptor signaling pathway","type":"exact"},{"name":"positive regulation of TGFbeta receptor signaling pathway","type":"exact"},{"name":"positive regulation of transforming growth factor beta receptor signalling pathway","type":"exact"},{"name":"stimulation of transforming growth factor beta receptor signaling pathway","type":"narrow"},{"name":"up regulation of transforming growth factor beta receptor signaling pathway","type":"exact"},{"name":"up-regulation of transforming growth factor beta receptor signaling pathway","type":"exact"},{"name":"upregulation of transforming growth factor beta receptor signaling pathway","type":"exact"}],"termid":"GO:0030511"}


id: GO:1990931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidative demethylation of N6-methyladenosine RNA, with concomitant decarboxylation of 2-oxoglutarate and releases oxidized methyl group on N6-methyladenosine as formaldehyde.","definition_xrefs":["PMID:26458103","PMID:22002720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidative RNA demethylase activity","termid":"GO:0035515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"mRNA N6-methyladenosine dioxygenase activity","secondary_identifiers":["RHEA:49520","EC:1.14.11.53"],"synonyms":[{"name":"RNA N6-methyladenosine dioxygenase activity","type":"related"},{"name":"mRNA N(6)-methyladenine demethylase","type":"exact"},{"name":"mRNA N(6)-methyladenosine dioxygenase activity","type":"exact"}],"termid":"GO:1990931"}


id: GO:0001746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the anatomical structures of the larval eye in Drosophila are generated and organized. The larval eye in Drosophila is a relatively simple sensory system composed of Bolwig's organs: two clusters, each composed of 12 photoreceptor cells from which axons extend in a single fascicle to the brain.","definition_xrefs":["PMID:6185380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye morphogenesis","termid":"GO:0048592"},{"relation_name":"part_of","term_name":"Bolwig's organ development","termid":"GO:0055034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Bolwig's organ morphogenesis","termid":"GO:0001746"}


id: PBO:0063748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 13","termid":"PBO:0063748"}


id: GO:0001817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of a cytokine.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of cytokine production","secondary_identifiers":["GO:0042035","GO:0050707"],"synonyms":[{"name":"regulation of cytokine anabolism","type":"exact"},{"name":"regulation of cytokine biosynthesis","type":"exact"},{"name":"regulation of cytokine biosynthetic process","type":"narrow"},{"name":"regulation of cytokine formation","type":"exact"},{"name":"regulation of cytokine secretion","type":"narrow"},{"name":"regulation of cytokine synthesis","type":"exact"}],"termid":"GO:0001817"}


id: PBO:0083596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; deletion adversely affects sporulation; deletion mutant exhibits synthetic phenotype under expression of mutant huntingtin fragment, but gene does not have human ortholog","termid":"PBO:0083596"}


id: PBO:0109630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napsin B aspartic peptidase (pseudogene)","termid":"PBO:0109630"}


id: PBO:0076408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 5","termid":"PBO:0076408"}


id: PBO:0042372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 like, pseudogene","termid":"PBO:0042372"}


id: GO:0047756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 4'-sulfate.","definition_xrefs":["MetaCyc:CHONDROITIN-4-SULFOTRANSFERASE-RXN","EC:2.8.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondroitin sulfotransferase activity","termid":"GO:0034481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"chondroitin 4-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-1971483","RHEA:16101"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:chondroitin 4'-sulfotransferase activity","type":"related"},{"name":"chondroitin 4-sulphotransferase activity","type":"exact"}],"termid":"GO:0047756"}


id: PBO:0004609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp2","termid":"PBO:0004609"}


id: PBO:0084637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mevalonate kinase; acts in the biosynthesis of isoprenoids and sterols, including ergosterol, from mevalonate; human MVK functionally complements the lethality of the erg12 null mutation","termid":"PBO:0084637"}


id: GO:0097275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of ammonium within a cell.","definition_xrefs":["GOC:yaf","PMID:12695560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"},{"relation_name":"is_a","term_name":"ammonium homeostasis","termid":"GO:0097272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular ammonium homeostasis","synonyms":[{"name":"cellular ammonia homeostasis","type":"exact"},{"name":"cellular ammonium homeostasis","type":"exact"}],"termid":"GO:0097275"}


id: PBO:0073203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 3C","termid":"PBO:0073203"}


id: PBO:0016976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug108","termid":"PBO:0016976"}


id: PBO:0077209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 7 superfamily member 3","termid":"PBO:0077209"}


id: PBO:0076599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 21","termid":"PBO:0076599"}


id: GO:0102721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + 2 an ubiquinol = 2 H2O + 2 an ubiquinone.","definition_xrefs":["GOC:pz","RHEA:30255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ubiquinol:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-6883","EC:1.10.3.11"],"termid":"GO:0102721"}


id: PBO:0044654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 5","termid":"PBO:0044654"}


id: FYPO:0003300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation via the N-end rule pathway is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteasomal ubiquitin-dependent protein degradation","termid":"FYPO:0004545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein degradation via N-end rule pathway during vegetative growth","synonyms":[{"name":"decreased protein degradation via N-end rule pathway during mitotic cell cycle","type":"related"},{"name":"decreased ubiquitin-dependent protein breakdown via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein catabolic process via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein catabolism via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein degradation via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"reduced protein degradation via N-end rule pathway during vegetative growth","type":"exact"}],"termid":"FYPO:0003300"}


id: PBO:0003485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor two Cft2/polyadenylation factor CPSF-73 (predicted)","termid":"PBO:0003485"}


id: PBO:0085838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YBR197C is not an essential gene; relative distribution to the nucleus increases upon DNA replication stress; YBR197C has a paralog, YPL077C, that arose from the whole genome duplication","termid":"PBO:0085838"}


id: GO:0042394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The shedding of the old protein-based cuticular fragments during the molting cycle. Examples of this process are found in invertebrates.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete ecdysis, protein-based cuticle (obsolete GO:0042394)","synonyms":[{"name":"ecdysis, protein-based cuticle","type":"exact"}],"termid":"GO:0042394"}


id: PBO:0036278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl-(protein) hydrolase (predicted)","termid":"PBO:0036278"}


id: PBO:0060749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B2 pseudogene 2","termid":"PBO:0060749"}


id: GO:0030001
data:
  {"annotated_genes":["SJAG_04698","SJAG_04743","SJAG_01353","SJAG_01527","SJAG_03079","SJAG_01541","SJAG_02968","SJAG_03399","SJAG_02473","SJAG_02735","SJAG_02457","SJAG_03497","SJAG_03516","SJAG_04551","SJAG_02532","SJAG_03873","SJAG_01990","SJAG_01803","SJAG_03631","SJAG_00222","SJAG_02019","SJAG_02883","SJAG_01119","SJAG_03231","SJAG_03401","SJAG_02322","SJAG_04757","SJAG_02877","SJAG_04677","SJAG_01090","SJAG_01007","SJAG_02578","SJAG_00547","SJAG_05229","SJAG_04737","SJAG_01493","SJAG_02834","SJAG_04028","SJAG_02445","SJAG_04096","SJAG_02440","SJAG_01639","SJAG_02399","SJAG_03895","SJAG_00211","SJAG_04616","SJAG_04246","SJAG_00296","SJAG_03528","SJAG_03850","SJAG_01400","SJAG_04867","SJAG_04260","SJAG_04185","SJAG_04830","SJAG_01078","SJAG_00321","SJAG_04675","SJAG_02484","SJAG_00328","SJAG_04668","SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92658],"is_not":false,"summary":null,"term":"GO:0030001"},{"annotations":[114265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"},{"annotations":[63462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070574"},{"annotations":[93468,91743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[95728,88443,88496,110529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[111646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[91792,110024,86811,97729,104758,105467,91562,92092,94434,90922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070588"},{"annotations":[103950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060003"},{"annotations":[108891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015677"},{"annotations":[110680,84076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[97583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097430"},{"annotations":[65809,61562,110681,84077,100706,99894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035434"},{"annotations":[100797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006825"},{"annotations":[87302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[86813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032472"},{"annotations":[96590,109893,94192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[60768,99903,108892,109316,91433,88544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034755"},{"annotations":[85393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[110723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"},{"annotations":[86338,56716,103685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903830"},{"annotations":[60769,86814,87303,63463,104760,91434,99904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071421"},{"annotations":[103409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045016"},{"annotations":[90326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140141"},{"annotations":[87320,109461],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[112090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"},{"annotations":[112091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035444"},{"annotations":[98249],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[108442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097623"},{"annotations":[85633,93107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990573"},{"annotations":[57329,60909,85435,66542,93108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071805"},{"annotations":[88545,88549,99895,108893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[89479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051209"},{"annotations":[104761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"},{"annotations":[106878,106877,61325,61608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"},{"annotations":[108894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015891"},{"annotations":[61607,106879,106880,61324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[92849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036376"},{"annotations":[85437,60883,66541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035725"},{"annotations":[108443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006814"},{"annotations":[110435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"},{"annotations":[109317,100278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"},{"annotations":[89873,89874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140209"},{"annotations":[86563,100413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"},{"annotations":[100414,86564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062111"},{"annotations":[100415,97329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071577"}]},"cv_name":"biological_process","definition":"The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation 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ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0070839","GO:0070838"],"synonyms":[{"name":"divalent metal ion export","type":"narrow"},{"name":"divalent metal ion transport","type":"narrow"},{"name":"heavy metal ion transport","type":"narrow"},{"name":"metal ion export","type":"narrow"}],"termid":"GO:0030001","terms_by_termid":{"GO:0006814":null,"GO:0006825":null,"GO:0015677":null,"GO:0015891":null,"GO:0030001":null,"GO:0032472":null,"GO:0033214":null,"GO:0033215":null,"GO:0034755":null,"GO:0035434":null,"GO:0035444":null,"GO:0035725":null,"GO:0036249":null,"GO:0036376":null,"GO:0036444":null,"GO:0044718":null,"GO:0045016":null,"GO:0048250":null,"GO:0051209":null,"GO:0060003":null,"GO:0061454":null,"GO:0061856":null,"GO:0062111":null,"GO:0070574":null,"GO:0070588":null,"GO:0071421":null,"GO:0071577":null,"GO:0071578":null,"GO:0071805":null,"GO:0097430":null,"GO:0097623":null,"GO:0098703":null,"GO:0098705":null,"GO:0098716":null,"GO:0140141":null,"GO:0140146":null,"GO:0140147":null,"GO:0140209":null,"GO:0140466":null,"GO:1903830":null,"GO:1904257":null,"GO:1905665":null,"GO:1905949":null,"GO:1990573":null,"GO:1990616":null}}


id: GO:1990727
data:
  {"annotated_genes":["SJAG_01526","SJAG_02672","SJAG_04074"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89587,92661,98551],"is_not":false,"summary":null,"term":"GO:1990727"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex involved in tubulin alpha-beta-subunit folding assembly consisting of beta-tubulin-TFC-D, alpha-tubulin-TFC-E and TFC-C, through which tubulin subunit association and dimer release occur.","definition_xrefs":["PMID:12445400","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01526":null,"SJAG_02672":null,"SJAG_04074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tubulin folding cofactor complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990727","terms_by_termid":{"GO:1990727":null}}


id: SO:0001391
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified glutamic acid.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_glutamic_acid","secondary_identifiers":["MOD:00906"],"synonyms":[{"name":"ModGlu","type":"exact"},{"name":"modified L glutamic acid","type":"exact"},{"name":"modified L-glutamic acid","type":"exact"}],"termid":"SO:0001391"}


id: PBO:0017822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 L associated factor 1 Laf1","termid":"PBO:0017822"}


id: GO:1990190
data:
  {"annotated_genes":["SJAG_04631"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85518],"is_not":false,"summary":null,"term":"GO:1990190"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + N-terminal L-glutamate in peptide = CoA + N-acetyl-L-glutamate-peptide.","definition_xrefs":["GOC:al","PMID:23912279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide alpha-N-acetyltransferase activity","termid":"GO:0004596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0034212","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"peptide-glutamate-alpha-N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990190","terms_by_termid":{"GO:1990190":null}}


id: PBO:0055593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3029","termid":"PBO:0055593"}


id: PBO:0055623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3062","termid":"PBO:0055623"}


id: FYPO:0004328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cellular protein localization is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization during mitosis","synonyms":[{"name":"normal cellular protein localization during mitosis","type":"exact"},{"name":"normal protein localisation during mitosis during vegetative growth","type":"exact"},{"name":"normal protein localization during mitotic M phase","type":"related"},{"name":"normal protein localization during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004328"}


id: GO:0004248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage where P1', P2' and P3' are hydrophobic residues.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete stromelysin 1 activity (obsolete GO:0004248)","synonyms":[{"name":"MMP-3","type":"exact"},{"name":"collagen-activating protein","type":"related"},{"name":"collagenase activating protein","type":"related"},{"name":"matrix metalloproteinase 3 activity","type":"related"},{"name":"neutral proteoglycanase activity","type":"related"},{"name":"procollagenase activator","type":"related"},{"name":"proteoglycanase activity","type":"related"},{"name":"stromelysin","type":"related"},{"name":"stromelysin 1 activity","type":"exact"},{"name":"transin activity","type":"related"}],"termid":"GO:0004248"}


id: PBO:0024839
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SUV3","termid":"PBO:0024839"}


id: GO:2000947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amylopectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of starch catabolic process","termid":"GO:2000883"},{"relation_name":"is_a","term_name":"positive regulation of amylopectin metabolic process","termid":"GO:2000944"},{"relation_name":"is_a","term_name":"regulation of amylopectin catabolic process","termid":"GO:2000945"},{"relation_name":"positively_regulates","term_name":"amylopectin catabolic process","termid":"GO:2000897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"positive regulation of amylopectin catabolic process","synonyms":[{"name":"positive regulation of Amylopectin catabolism","type":"exact"}],"termid":"GO:2000947"}


id: SO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is acylated.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001721 H3K27_acylation_site (obsolete SO:0001721)","synonyms":[{"name":"H3K27 acylation site","type":"exact"},{"name":"H3K27Ac","type":"related"}],"termid":"SO:0001721"}


id: PBO:0005676
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELL Associated Factor","termid":"PBO:0005676"}


id: PR:P09322
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03744","PANTHER:PTHR10484:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.03c","secondary_identifiers":["UniProtKB:P09322"],"synonyms":[{"name":"Spom972h-HIST4H4","type":"exact"}],"termid":"PR:P09322"}


id: GO:0032428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-beta-D-galactosaminides.","definition_xrefs":["EC:3.2.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-N-acetylhexosaminidase activity","termid":"GO:0004563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-N-acetylgalactosaminidase activity","secondary_identifiers":["MetaCyc:3.2.1.53-RXN"],"termid":"GO:0032428"}


id: GO:0006738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinamide riboside metabolic process","termid":"GO:0046495"},{"relation_name":"is_a","term_name":"pyridine nucleoside catabolic process","termid":"GO:0070638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nicotinamide riboside catabolic process","synonyms":[{"name":"N-ribosylnicotinamide catabolic process","type":"exact"},{"name":"nicotinamide riboside breakdown","type":"exact"},{"name":"nicotinamide riboside catabolism","type":"exact"},{"name":"nicotinamide riboside degradation","type":"exact"}],"termid":"GO:0006738"}


id: PBO:0077513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM230 pseudogene 1","termid":"PBO:0077513"}


id: PBO:0076233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SURF1 cytochrome c oxidase assembly factor","termid":"PBO:0076233"}


id: PBO:0059802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 28","termid":"PBO:0059802"}


id: SO:0000403
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U14 small nucleolar RNA (U14 snoRNA) is required for early cleavages of eukaryotic precursor rRNAs. In yeasts, this molecule possess a stem-loop region (known as the Y-domain) which is essential for function. A similar structure, but with a different consensus sequence, is found in plants, but is absent in vertebrates.","definition_xrefs":["PMID:2551119"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"U14_snoRNA_primary_transcript","termid":"SO:0005837"},{"relation_name":"is_a","term_name":"C_D_box_snoRNA","termid":"SO:0000593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U14_snoRNA","secondary_identifiers":["SO:0005839"],"synonyms":[{"name":"U14 small nucleolar RNA","type":"exact"},{"name":"U14 snoRNA","type":"exact"},{"name":"small nucleolar RNA U14","type":"exact"},{"name":"snoRNA U14","type":"exact"}],"termid":"SO:0000403"}


id: GO:0005787
data:
  {"annotated_genes":["SJAG_02867","SJAG_03737","SJAG_01750","SJAG_03261"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83782,94526,99922,108656],"is_not":false,"summary":null,"term":"GO:0005787"}]},"cv_name":"cellular_component","definition":"A protein complex that is located in the endoplasmic reticulum membrane and cleaves the signal sequence from precursor proteins following their transport out of the cytoplasmic space.","definition_xrefs":["PMID:7615509","GOC:sgd_curators","PMID:1846444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"serine-type endopeptidase complex","termid":"GO:1905370"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01750":null,"SJAG_02867":null,"SJAG_03261":null,"SJAG_03737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005783","GO:0005737","GO:0005789"],"is_obsolete":false,"name":"signal peptidase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005787","terms_by_termid":{"GO:0005787":null}}


id: PBO:0083406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YHR032W-A","termid":"PBO:0083406"}


id: GO:0040010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate of growth of all or part of an organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth rate","termid":"GO:0040009"},{"relation_name":"is_a","term_name":"positive regulation of growth","termid":"GO:0045927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of growth rate","synonyms":[{"name":"activation of growth rate","type":"narrow"},{"name":"stimulation of growth rate","type":"narrow"},{"name":"up regulation of growth rate","type":"exact"},{"name":"up-regulation of growth rate","type":"exact"},{"name":"upregulation of growth rate","type":"exact"}],"termid":"GO:0040010"}


id: PBO:0058566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6508","termid":"PBO:0058566"}


id: PBO:0084266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane component of ER-derived COPII-coated vesicles; functions in ER to Golgi transport; forms a complex with Ssp120p that may function in trafficking plasma membrane glycoproteins through early secretory pathway; EMP47 has a paralog, EMP46, that arose from the whole genome duplication","termid":"PBO:0084266"}


id: GO:0050890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory.","definition_xrefs":["ISBN:0721619908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cognition","secondary_identifiers":["Wikipedia:Cognition"],"termid":"GO:0050890"}


id: FYPO:0000805
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115204],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0006433"},{"annotations":[115504,115519,115516,115507,115505],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001784"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endoplasmic reticulum (ER) organization is abnormal. ER organization results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum.","definition_xrefs":["PomBase:mah","GO:0007029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system organization","termid":"FYPO:0000804"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal endoplasmic reticulum organization","references_by_uniquename":{"PMID:25318672":null,"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_00426","SJAG_02763","SJAG_03940","SJAG_01906"],"single_locus_genotype_uniquenames":["nem1delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","ned1delta"],"synonyms":[{"name":"abnormal ER organization","type":"exact"},{"name":"abnormal endoplasmic reticulum organisation","type":"exact"},{"name":"abnormal endoplasmic reticulum organization during mitotic cell cycle","type":"related"},{"name":"abnormal endoplasmic reticulum organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000805","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001784":null,"FYPO:0006433":null,"FYPO_EXT:0000001":null}}


id: PBO:0083648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongin C, conserved among eukaryotes; forms a complex with Cul3p that polyubiquitylates monoubiquitylated RNA polymerase II to trigger its proteolysis; plays a role in global genomic repair","termid":"PBO:0083648"}


id: SO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the three_prime_coding_exon that codes for protein.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_region_of_exon","termid":"SO:0001215"},{"relation_name":"part_of","term_name":"three_prime_coding_exon","termid":"SO:0000202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon_coding_region","synonyms":[{"name":"three prime exon coding region","type":"exact"}],"termid":"SO:0000197"}


id: PR:Q09923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized oxidoreductase YdjG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase yakc [NADP(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.12","secondary_identifiers":["UniProtKB:Q09923"],"synonyms":[{"name":"Spom972h-ydjG","type":"exact"}],"termid":"PR:Q09923"}


id: PBO:0060748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFB2 antisense RNA 1","termid":"PBO:0060748"}


id: PBO:0044047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and glycine rich protein 1","termid":"PBO:0044047"}


id: PBO:0075947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 2 (pseudogene)","termid":"PBO:0075947"}


id: GO:0048915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line system over time, from its formation to the mature structure. The posterior lateral line system develops from cranial ectodermal placodes, situated behind the ear, that give rise to both the neuromasts and the posterior lateral line sensory nerves that innervate the neuromasts. The posterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The neuromasts are innervated by several lateral line nerves, which project primarily to the hindbrain. The posterior mechanosensory lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance.","definition_xrefs":["PMID:15018940","ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line system development","termid":"GO:0048925"},{"relation_name":"part_of","term_name":"mechanosensory lateral line system development","termid":"GO:0048881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line system development","synonyms":[{"name":"PLL","type":"related"}],"termid":"GO:0048915"}


id: PBO:0083826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex; poly (A) mRNA binding subunit which recruits mRNA to the complex; the Pan2p-Pan3p complex controls poly(A) tail length and regulates the stoichiometry and activity of postreplication repair complexes","termid":"PBO:0083826"}


id: GO:0060536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cartilage are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage morphogenesis","termid":"GO:0060536"}


id: PBO:0055742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMX1A antisense RNA 2","termid":"PBO:0055742"}


id: GO:0000124
data:
  {"annotated_genes":["SJAG_02927","SJAG_00641","SJAG_02773","SJAG_01711","SJAG_00184","SJAG_04274","SJAG_01475","SJAG_03599","SJAG_03776","SJAG_04205","SJAG_00584","SJAG_02066","SJAG_00087","SJAG_03668","SJAG_04613","SJAG_01658","SJAG_03752","SJAG_02458","SJAG_02541"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84475,84624,85398,87511,93930,94609,99470,101852,102990,103422,103781,107844,108647,109075,110398,111468,112379,113636,113685],"is_not":false,"summary":null,"term":"GO:0000124"}]},"cv_name":"cellular_component","definition":"A SAGA-type histone acetyltransferase complex that deubiquitinates H2A and/or H2B. This complex is organized into several functional submodules: a structural core including the activator binding module and consisting of ADA1 or a homolog, members of the SPT and TAF protein families as well as promotor recruitment factor TRRAP/TRA1, a histone acetyltransferase (HAT) module consisting of GCN5/KAT2A or PCAF/KAT2B, ADA2, ADA3/NGG1, and SGF29 or homologues thereof, a histone deubiquitinase (DUB) module consisting of ATXN7/SGF73, ATXN7L3/SGF11, ENY2/SUS1 and USP22/UBP8 or homologues thereof, and in some taxa a splicing module consisting of SF3B3 and SF3B5 or homologues thereof (not in fungi). In budding yeast also contains Spt8 which distinguishes it from SAGA-like (SLIK) complex (GO:0046695).","definition_xrefs":["PMID:17337012","PMID:33004486","PMID:20838651","PMID:10637607","PMID:19056896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"},{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_02066":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02773":null,"SJAG_02927":null,"SJAG_03599":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"SAGA complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000125","GO:0030914"],"synonyms":[{"name":"PCAF complex","type":"narrow"},{"name":"PCAF histone acetylase-associated complex","type":"narrow"},{"name":"SPT3-TAF9-GCN5 acetylase complex","type":"related"},{"name":"SPT3-TAF9-PCAF acetylase complex","type":"narrow"},{"name":"STAGA coactivator complex","type":"related"},{"name":"STAGA complex","type":"related"},{"name":"Spt-Ada-Gcn5-acetyltransferase complex","type":"exact"}],"termid":"GO:0000124","terms_by_termid":{"GO:0000124":null}}


id: PBO:0017987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Haemolysin-III family plasma membrane receptor implicated in zinc ion homeostasis Izh2 (predicted)","termid":"PBO:0017987"}


id: PBO:0054106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1471","termid":"PBO:0054106"}


id: PBO:0001226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arv1-like family protein Arv1 (predicted)","termid":"PBO:0001226"}


id: GO:0031852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mu-type opioid receptor.","definition_xrefs":["GOC:nln","GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opioid receptor binding","termid":"GO:0031628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mu-type opioid receptor binding","synonyms":[{"name":"morphine receptor binding","type":"related"},{"name":"mu-type opioid receptor ligand","type":"narrow"}],"termid":"GO:0031852"}


id: PR:G2TRP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30B4.09 gene.","definition_xrefs":["UniProtKB:G2TRP1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30B4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.09","synonyms":[{"name":"Spom972h-SPBC30B4.09","type":"exact"}],"termid":"PR:G2TRP1"}


id: PBO:0064965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 18","termid":"PBO:0064965"}


id: PBO:0077261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 10 pseudogene 1","termid":"PBO:0077261"}


id: GO:0018975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid, that occur in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4,6-trinitrotoluene metabolic process","termid":"GO:0018974"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic 2,4,6-trinitrotoluene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:tnt2"],"synonyms":[{"name":"anaerobic 2,4,6-trinitrotoluene metabolism","type":"exact"}],"termid":"GO:0018975"}


id: PBO:0077193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TM2 domain containing 1","termid":"PBO:0077193"}


id: FYPO:0004937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during the first meiotic nuclear division. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiosis","termid":"FYPO:0002959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during meiosis I","synonyms":[{"name":"decreased RNA accumulation during meiosis I","type":"related"},{"name":"decreased RNA level during first meiotic nuclear division","type":"exact"},{"name":"decreased transcript level during meiosis I","type":"exact"},{"name":"reduced RNA level during meiosis I","type":"exact"}],"termid":"FYPO:0004937"}


id: GO:0050897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cobalt ion (Co2+).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0046872","GO:0005488"],"is_obsolete":false,"name":"cobalt ion binding","synonyms":[{"name":"Co ion binding","type":"exact"},{"name":"cobalt binding","type":"exact"}],"termid":"GO:0050897"}


id: PBO:0017538
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor syndrome","termid":"PBO:0017538"}


id: PBO:0001713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg24 (predicted)","termid":"PBO:0001713"}


id: GO:0070244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of thymocyte death by apoptotic process.","definition_xrefs":["ISBN:0781765196","GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of thymocyte apoptotic process","termid":"GO:0070243"},{"relation_name":"negatively_regulates","term_name":"thymocyte apoptotic process","termid":"GO:0070242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thymocyte apoptotic process","synonyms":[{"name":"down regulation of thymocyte apoptosis","type":"exact"},{"name":"down-regulation of thymocyte apoptosis","type":"exact"},{"name":"downregulation of thymocyte apoptosis","type":"exact"},{"name":"inhibition of thymocyte apoptosis","type":"narrow"},{"name":"negative regulation of immature T cell apoptosis","type":"related"},{"name":"negative regulation of thymocyte apoptosis","type":"narrow"}],"termid":"GO:0070244"}


id: PBO:0091308
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RAB6A","termid":"PBO:0091308"}


id: GO:0062109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of DNA recombinase disassembly, the disaggregation of a DNA recombinase complex into its constituent components.","definition_xrefs":["PMID:30297419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"DNA recombinase disassembly","termid":"GO:1990986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of DNA recombinase disassembly","termid":"GO:0062109"}


id: GO:0030551
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030552"}]},"cv_name":"molecular_function","definition":"Binding to a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cyclic nucleotide binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030551","terms_by_termid":{"GO:0030552":null}}


id: PBO:0067068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 96, pseudogene","termid":"PBO:0067068"}


id: GO:1903408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium:potassium-exchanging ATPase activity.","definition_xrefs":["GOC:mr","GO_REF:0000059","PMID:8160880","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"},{"relation_name":"is_a","term_name":"positive regulation of potassium ion transmembrane transporter activity","termid":"GO:1901018"},{"relation_name":"is_a","term_name":"regulation of P-type sodium:potassium-exchanging transporter activity","termid":"GO:1903406"},{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transporter activity","termid":"GO:2000651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of P-type sodium:potassium-exchanging transporter activity","synonyms":[{"name":"activation of (Na+ + K+)-ATPase activity","type":"narrow"},{"name":"activation of (Na+ + K+)-activated ATPase activity","type":"narrow"},{"name":"activation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"narrow"},{"name":"activation of Na(+)/K(+)-ATPase activity","type":"narrow"},{"name":"activation of Na(+)/K(+)-exchanging ATPase activity","type":"narrow"},{"name":"activation of Na+,K+ pump","type":"related"},{"name":"activation of Na+,K+-ATPase activity","type":"narrow"},{"name":"activation of Na+/K+-ATPase activity","type":"narrow"},{"name":"activation of Na+/K+-exchanging ATPase activity","type":"narrow"},{"name":"activation of Na,K-activated ATPase activity","type":"narrow"},{"name":"activation of Na,K-pump","type":"related"},{"name":"activation of sodium/potassium-exchanging ATPase activity","type":"narrow"},{"name":"activation of sodium/potassium-transporting ATPase activity","type":"narrow"},{"name":"activation of sodium:potassium exchanging ATPase activity","type":"narrow"},{"name":"activation of sodium:potassium-exchanging ATPase activity","type":"narrow"},{"name":"positive regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"positive regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"positive regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"positive regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"positive regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of Na+,K+ pump","type":"related"},{"name":"positive regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"positive regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"positive regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"positive regulation of Na,K-pump","type":"related"},{"name":"positive regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"positive regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"positive regulation of sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"up regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"up regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"up regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"up regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"up regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"up regulation of Na+,K+ pump","type":"related"},{"name":"up regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"up regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"up regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"up regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"up regulation of Na,K-pump","type":"related"},{"name":"up regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"up regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"up regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"up regulation of sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"up-regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"up-regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"up-regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"up-regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of Na+,K+ pump","type":"related"},{"name":"up-regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"up-regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"up-regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"up-regulation of Na,K-pump","type":"related"},{"name":"up-regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"up-regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"up-regulation of sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"upregulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"upregulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"upregulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"upregulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"upregulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"upregulation of Na+,K+ pump","type":"related"},{"name":"upregulation of Na+,K+-ATPase activity","type":"exact"},{"name":"upregulation of Na+/K+-ATPase activity","type":"exact"},{"name":"upregulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"upregulation of Na,K-activated ATPase activity","type":"exact"},{"name":"upregulation of Na,K-pump","type":"related"},{"name":"upregulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"upregulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"upregulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"upregulation of sodium:potassium-exchanging ATPase activity","type":"exact"}],"termid":"GO:1903408"}


id: PBO:0004693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc1","termid":"PBO:0004693"}


id: SO:0002352
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA typically derived from intronic sequence of the sense strand of a cognate host gene, that is not rapidly degraded. It may contain exonic sequences, 5′ caps, and/or polyA tails.","definition_xrefs":["PMID:30391089","PMID:27147469","PMID:29397203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sisRNA","synonyms":[{"name":"Stable intronic sequence RNA","type":"exact"},{"name":"stable_intronic_sequence_RNA","type":"exact"}],"termid":"SO:0002352"}


id: PR:O59797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nap1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein C364.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.06","synonyms":[{"name":"Spom972h-nap1","type":"exact"}],"termid":"PR:O59797"}


id: GO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a GPI-anchored ephrin to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:9530499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ephrin receptor activity","termid":"GO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824","GO:0004672","GO:0140096","GO:0038023"],"is_obsolete":false,"name":"GPI-linked ephrin receptor activity","synonyms":[{"name":"GPI-linked Eph receptor activity","type":"exact"}],"termid":"GO:0005004"}


id: PBO:0031385
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_transcription_by_glucose","termid":"PBO:0031385"}


id: PR:P87244
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alp16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body component alp16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.19","synonyms":[{"name":"Spom972h-alp16","type":"exact"},{"name":"altered polarity protein 16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87244"}


id: PBO:0055715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase maturation factor 1","termid":"PBO:0055715"}


id: PBO:0052263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 3A","termid":"PBO:0052263"}


id: PBO:0079161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 19","termid":"PBO:0079161"}


id: SO:0000642
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a signal recognition particle RNA (SRP RNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP_RNA_encoding","synonyms":[{"name":"SRP RNA encoding","type":"exact"}],"termid":"SO:0000642"}


id: PBO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain","termid":"PBO:0002307"}


id: PBO:0044614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 16","termid":"PBO:0044614"}


id: PR:O59733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor SYF2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13264:SF5","OMA:SCHPO03374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor syf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.13c","secondary_identifiers":["UniProtKB:O59733"],"synonyms":[{"name":"Spom972h-SYF2","type":"exact"}],"termid":"PR:O59733"}


id: PBO:0004413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras1-Scd pathway protein Ral2","termid":"PBO:0004413"}


id: PBO:0078972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon CGA) 4-1","termid":"PBO:0078972"}


id: GO:0043941
data:
  {"annotated_genes":["SJAG_02169","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the formation of cellular spores derived from the products of meiosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"is_a","term_name":"positive regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0045881"},{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"positively_regulates","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043941","terms_by_termid":{"GO:0075296":null,"GO:1903024":null}}


id: PBO:0113509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C protein phosphatase (PP2C); dephosphorylates Hog1p, inactivating the osmosensing MAPK cascade; involved in Fus3p activation during pheromone response; deletion affects precursor tRNA splicing, mitochondrial inheritance, and sporulation; involved in myosin-V dependent inheritance of mitochondria, peroxisomes, vacuoles and secretory vesicles; localizes to the nucleus, cytoplasm and peroxisomes","termid":"PBO:0113509"}


id: PBO:0090442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap104","termid":"PBO:0090442"}


id: GO:1904045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aldosterone stimulus.","definition_xrefs":["PMID:17644563","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to mineralocorticoid stimulus","termid":"GO:0071389"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to aldehyde","termid":"GO:0110096"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to aldosterone","termid":"GO:1904044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to aldosterone","termid":"GO:1904045"}


id: PBO:0078358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 4-1","termid":"PBO:0078358"}


id: GO:0003964
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104035,104036],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0003721"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes RNA-template-directed extension of the 3'- end of a DNA strand by one deoxynucleotide at a time.","definition_xrefs":["EC:2.7.7.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase activity","termid":"GO:0034061"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0016779","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"RNA-directed DNA polymerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-164504","MetaCyc:RNA-DIRECTED-DNA-POLYMERASE-RXN","Reactome:R-HSA-164520"],"synonyms":[{"name":"DNA nucleotidyltransferase (RNA-directed) activity","type":"related"},{"name":"RNA revertase activity","type":"related"},{"name":"RNA-dependent DNA polymerase activity","type":"related"},{"name":"RNA-dependent deoxyribonucleate nucleotidyltransferase activity","type":"related"},{"name":"RNA-directed DNA polymerase, group II intron encoded","type":"narrow"},{"name":"RNA-directed DNA polymerase, transposon encoded","type":"narrow"},{"name":"RNA-instructed DNA polymerase activity","type":"related"},{"name":"RT","type":"related"},{"name":"deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (RNA-directed) activity","type":"related"},{"name":"reverse transcriptase activity","type":"related"},{"name":"revertase activity","type":"related"}],"termid":"GO:0003964","terms_by_termid":{"GO:0003721":null}}


id: PBO:0073747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 3 pseudogene 4","termid":"PBO:0073747"}


id: GO:0070210
data:
  {"annotated_genes":["SJAG_01926","SJAG_03230","SJAG_00441","SJAG_00581","SJAG_03867","SJAG_03255","SJAG_04396","SJAG_03441","SJAG_02981","SJAG_02846","SJAG_04576","SJAG_00868","SJAG_02439","SJAG_04389","SJAG_01230","SJAG_04758","SJAG_03627"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74740,77905,85231,89290,89325,90747,91554,93330,98881,99955,100805,101107,102836,105561,106568,110238,110328],"is_not":false,"summary":null,"term":"GO:0070210"}]},"cv_name":"cellular_component","definition":"A protein complex that contains a histone deacetylase and is part of the chromatin remodeling machinery. In Saccharomyces cerevisiae this complex contains the Rpd3p, Sin3p, Ume1p, Pho23p, Sap30p, Sds3p, Cti6p, Rxt2p, Rxt3p, Dep1p, Ume6p, Ash1p, Dot6p, Snt1, Sif2p, Set3p, Hos2p, Tos4p and Tod6p proteins.","definition_xrefs":["GOC:rb","PMID:19040720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_01230":null,"SJAG_01926":null,"SJAG_02439":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03627":null,"SJAG_03867":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04576":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005654","GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Rpd3L-Expanded complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Clr6-LE complex","type":"exact"}],"termid":"GO:0070210","terms_by_termid":{"GO:0070210":null}}


id: GO:0140070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of hydrogen peroxide through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:23541115","PMID:27256569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"},{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"hydrogen peroxide channel activity","synonyms":[{"name":"hydrogen peroxide transmembrane transporter activity","type":"related"}],"termid":"GO:0140070"}


id: PBO:0087293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Similar to 6-phosphofructo-2-kinase enzymes; mRNA expression is repressed by the Rfx1p-Tup1p-Ssn6p repressor complex; YLR345W is not an essential gene","termid":"PBO:0087293"}


id: MOD:00155
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to L-3',4'-dihydroxyphenylalanine.","definition_xrefs":["RESID:AA0146","OMSSA:194","OMSSA:64","Unimod:35#Y","PubMed:1610822","PubMed:3734192","ChEBI:141815","DeltaMass:0","PubMed:1903612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated tyrosine","termid":"MOD:00707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3',4'-dihydroxyphenylalanine","synonyms":[{"name":"(2S)-2-amino-3-(3,4-dihydroxyphenyl)propanoic acid","type":"exact"},{"name":"3,4-Dihydroxy-Phenylalanine (from Tyrosine) (DOPA)","type":"exact"},{"name":"3HyTyr","type":"exact"},{"name":"L-3',4'-dihydroxyphenylalanine","type":"exact"},{"name":"L-3'-hydroxytyrosine","type":"exact"},{"name":"L-DOPA","type":"exact"},{"name":"MOD_RES 3',4'-dihydroxyphenylalanine","type":"exact"},{"name":"hydroxylationy","type":"exact"},{"name":"levodopa","type":"exact"},{"name":"mod194","type":"exact"}],"termid":"MOD:00155"}


id: PBO:0042701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELF2 antisense RNA 1","termid":"PBO:0042701"}


id: PBO:0080909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta","termid":"PBO:0080909"}


id: PBO:0040619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP and activin membrane bound inhibitor","termid":"PBO:0040619"}


id: PBO:0090577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated PX/BAR domain sorting nexin Atg20","termid":"PBO:0090577"}


id: PBO:0110492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 37","termid":"PBO:0110492"}


id: GO:0048761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a collenchyma cell. This is a plant cell in which the primary cell walls are unevenly thickened, with most thickening occurring at the cell corners. Cells are living and able to grow, they are elongated, and lignin and secondary walls absent. Collenchyma cells make up collenchyma tissue which acts as a supporting tissue in growing shoots, leaves and petioles. This tissue is often arranged in cortical ribs, as seen prominently in celery and rhubarb petioles.","definition_xrefs":["PO:0000075","CL:0000330","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collenchyma cell differentiation","termid":"GO:0048761"}


id: GO:1902254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway by p53 class mediator.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis","PMID:15705871","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction by p53 class mediator","termid":"GO:1901797"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902253"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:0072332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway by p53 class mediator","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"down regulation of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down-regulation of intrinsic apoptotic signaling pathway by p53 class mediator","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"down-regulation of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"downregulation of intrinsic apoptotic signaling pathway by p53 class mediator","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"downregulation of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"inhibition of intrinsic apoptotic signaling pathway by p53 class mediator","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"narrow"},{"name":"inhibition of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"negative regulation of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"negative regulation of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902254"}


id: GO:0060027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelium narrows along one axis and lengthens in a perpendicular axis usually resulting in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm.","definition_xrefs":["PMID:12062082","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"convergent extension","termid":"GO:0060026"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in gastrulation","termid":"GO:0060027"}


id: PBO:0081483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 365","termid":"PBO:0081483"}


id: PBO:0068818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 56, pseudogene","termid":"PBO:0068818"}


id: PBO:0069708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 988, pseudogene","termid":"PBO:0069708"}


id: GO:0031252
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The area of a motile cell closest to the direction of movement.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell leading edge","synonyms":[{"name":"front of cell","type":"exact"},{"name":"leading edge of cell","type":"exact"}],"termid":"GO:0031252"}


id: GO:0002707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of lymphocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated immunity","termid":"GO:0002704"},{"relation_name":"is_a","term_name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"},{"relation_name":"negatively_regulates","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte mediated immunity","synonyms":[{"name":"down regulation of lymphocyte mediated immunity","type":"exact"},{"name":"down-regulation of lymphocyte mediated immunity","type":"exact"},{"name":"downregulation of lymphocyte mediated immunity","type":"exact"},{"name":"inhibition of lymphocyte mediated immunity","type":"narrow"}],"termid":"GO:0002707"}


id: PBO:0089561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 1 (Sam37)","termid":"PBO:0089561"}


id: PBO:0012536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_maturation_of","termid":"PBO:0012536"}


id: FYPO:0001741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which chromosomal translocations occur more frequently than in wild type cells. In a chromosomal translocation, chromosome parts are exchanged between non-homologous chromosomes.","definition_xrefs":["PomBase:al","PMID:18923422","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gross chromosomal rearrangement","termid":"FYPO:0001740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"increased chromosomal translocation","synonyms":[{"name":"increased occurrence of chromosomal translocation","type":"exact"}],"termid":"FYPO:0001741"}


id: PBO:0036230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase, pseudogene (4 frameshifts)","termid":"PBO:0036230"}


id: GO:0043280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0043281"},{"relation_name":"is_a","term_name":"positive regulation of cysteine-type endopeptidase activity","termid":"GO:2001056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cysteine-type endopeptidase activity involved in apoptotic process","synonyms":[{"name":"activation of caspase activity","type":"narrow"},{"name":"positive regulation of caspase activity","type":"broad"},{"name":"stimulation of caspase activity","type":"narrow"},{"name":"up regulation of caspase activity","type":"exact"},{"name":"up-regulation of caspase activity","type":"exact"},{"name":"upregulation of caspase activity","type":"exact"}],"termid":"GO:0043280"}


id: PBO:0040144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti-silencing function 1A histone chaperone","termid":"PBO:0040144"}


id: PBO:0029725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis,_with_abnormal_nuclear_division","termid":"PBO:0029725"}


id: GO:0001764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature.","definition_xrefs":["GOC:go_curators","CL:0000540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron migration","secondary_identifiers":["Wikipedia:Neuron_migration","Wikipedia:Neural_development#Neuron_migration"],"synonyms":[{"name":"neuron chemotaxis","type":"exact"},{"name":"neuron guidance","type":"related"},{"name":"neuronal migration","type":"exact"}],"termid":"GO:0001764"}


id: GO:1901055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trimethylenediamine.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimethylenediamine metabolic process","synonyms":[{"name":"trimethylenediamine metabolism","type":"exact"}],"termid":"GO:1901055"}


id: PBO:0078970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon CGA) 2-1","termid":"PBO:0078970"}


id: PBO:0056530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl-CoA-acyl carrier protein transacylase","termid":"PBO:0056530"}


id: GO:0035388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the Roundabout signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of Roundabout signaling pathway","termid":"GO:0035386"},{"relation_name":"positively_regulates","term_name":"Roundabout signaling pathway","termid":"GO:0035385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Roundabout signaling pathway","synonyms":[{"name":"positive regulation of Roundabout signalling pathway","type":"exact"}],"termid":"GO:0035388"}


id: GO:0071994
data:
  {"annotated_genes":["SJAG_05213","SJAG_03497","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114268,92180,93165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[114269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071995"}]},"cv_name":"biological_process","definition":"The process in which a phytochelatin is transported across a membrane. Phytochelatins are a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"phytochelatin transport","termid":"GO:0071993"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03497":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"phytochelatin transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadystin transmembrane transport","type":"related"},{"name":"phytochelatin membrane transport","type":"exact"}],"termid":"GO:0071994","terms_by_termid":{"GO:0036246":null,"GO:0071995":null}}


id: PR:Q7Z9I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z9I1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C188.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.09c","synonyms":[{"name":"Spom972h-pfl4","type":"exact"}],"termid":"PR:Q7Z9I1"}


id: GO:0008517
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103663],"is_not":false,"summary":null,"term":"GO:0008517"}]},"cv_name":"molecular_function","definition":"Enables the transfer of folic acid (pteroylglutamic acid) from one side of a membrane to the other. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"folic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-200646","Reactome:R-HSA-200652","Reactome:R-HSA-200729","Reactome:R-HSA-200680","Reactome:R-HSA-200720"],"synonyms":[{"name":"folate transmembrane transporter activity","type":"exact"},{"name":"folate transporter activity","type":"exact"},{"name":"folic acid transporter activity","type":"related"},{"name":"vitamin B9 transporter activity","type":"exact"},{"name":"vitamin M transporter activity","type":"exact"}],"termid":"GO:0008517","terms_by_termid":{"GO:0008517":null}}


id: PBO:0113376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cysteine synthase; localized to the mitochondrial outer membrane; interacts with TCD1 and TCD2, likely forming a complex","termid":"PBO:0113376"}


id: GO:0052064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by a symbiont of the production of reactive oxygen species as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30823485"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated activation of reactive oxygen species production in host cell (obsolete GO:0052064)","synonyms":[{"name":"activation by symbiont of defense-related host ROI production","type":"exact"},{"name":"activation by symbiont of defense-related host ROS production","type":"exact"},{"name":"activation by symbiont of defense-related host metabolic burst","type":"exact"},{"name":"activation by symbiont of defense-related host oxidative burst","type":"exact"},{"name":"activation by symbiont of defense-related host reactive oxidative species production","type":"exact"},{"name":"activation by symbiont of defense-related host reactive oxygen intermediate production","type":"exact"},{"name":"activation by symbiont of defense-related host reactive oxygen species production","type":"exact"},{"name":"activation by symbiont of defense-related host respiratory burst","type":"exact"},{"name":"induction by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of defense-related host AOS production","type":"exact"},{"name":"induction by symbiont of defense-related host active oxygen species production","type":"exact"},{"name":"induction by symbiont of defense-related host metabolic burst","type":"exact"},{"name":"induction by symbiont of defense-related host oxidative burst","type":"exact"},{"name":"induction by symbiont of defense-related host reactive oxidative species production","type":"exact"},{"name":"induction by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"induction by symbiont of defense-related reactive oxygen species production in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"stimulation by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"up regulation by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"up-regulation by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"upregulation by symbiont of defense-related host reactive oxygen species production","type":"related"}],"termid":"GO:0052064"}


id: PBO:0040020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 8 pseudogene 1","termid":"PBO:0040020"}


id: PBO:0088771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"con-6 family conserved fungal protein","termid":"PBO:0088771"}


id: GO:0052794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-(2->3)-glycosidic linkages of terminal sialic residues in substrates.","definition_xrefs":["GOC:mengo_curators","EC:3.2.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exo-alpha-sialidase activity","termid":"GO:0004308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"exo-alpha-(2->3)-sialidase activity","synonyms":[{"name":"exo-alpha-(2,3)-sialidase activity","type":"exact"},{"name":"exo-alpha-2,3-sialidase activity","type":"exact"}],"termid":"GO:0052794"}


id: FYPO:0005749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a lower extent than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein phosphorylation during glucose starvation","synonyms":[{"name":"decreased protein phosphorylation during glucose depletion","type":"exact"},{"name":"decreased protein phosphorylation during glucose deprivation","type":"exact"},{"name":"decreased protein phosphorylation during glucose limitation","type":"related"},{"name":"reduced protein phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0005749"}


id: PBO:0080923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 1","termid":"PBO:0080923"}


id: PBO:0034535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_targeting_to_vacuole,_with_protein_secreted","termid":"PBO:0034535"}


id: PBO:0027912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_hydroxyurea","termid":"PBO:0027912"}


id: PBO:0045641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 5","termid":"PBO:0045641"}


id: PBO:0076385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming acidic coiled-coil containing protein 2","termid":"PBO:0076385"}


id: GO:0035780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CD80, a CD marker that occurs on antigen presenting cells such as activated B cells and monocytes that provides a co-stimulatory signal necessary for T cell activation and survival.","definition_xrefs":["GOC:ebc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD80 biosynthetic process","synonyms":[{"name":"CD80 anabolism","type":"exact"},{"name":"CD80 biosynthesis","type":"exact"},{"name":"CD80 formation","type":"exact"},{"name":"CD80 synthesis","type":"exact"}],"termid":"GO:0035780"}


id: FYPO:0005275
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115290,115461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[115322,115324,115323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a mitotic cell cycle phase transition normally.","definition_xrefs":["GO:0044772","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abnormal cell cycle phase transition","termid":"FYPO:0005273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01330":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic cell cycle phase transition","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_01330","SJAG_03575","SJAG_01956"],"single_locus_genotype_uniquenames":["mad2delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0005275","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000324":null,"FYPO:0004318":null}}


id: _global:go_annotation_extension_relation
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"go_annotation_extension_relation","secondary_identifiers":["GOREL:0000000"],"termid":"_global:go_annotation_extension_relation"}


id: PR:O59833
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC965.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C965.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.13","synonyms":[{"name":"Spom972h-SPCC965.13","type":"exact"}],"termid":"PR:O59833"}


id: PBO:0069360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 620, pseudogene","termid":"PBO:0069360"}


id: PBO:0038618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin I converting enzyme 3, pseudogene","termid":"PBO:0038618"}


id: GO:1903026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA polymerase II regulatory region sequence-specific DNA binding.","definition_xrefs":["PMID:20026326","GOC:TermGenie","GOC:dph","GO_REF:0000059","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA polymerase II regulatory region sequence-specific DNA binding","termid":"GO:1903025"},{"relation_name":"is_a","term_name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA polymerase II regulatory region sequence-specific DNA binding","synonyms":[{"name":"down regulation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"exact"},{"name":"down-regulation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"exact"},{"name":"downregulation of RNA polymerase II regulatory region sequence-specific DNA binding","type":"exact"},{"name":"inhibition of RNA polymerase II regulatory region sequence-specific DNA binding","type":"narrow"}],"termid":"GO:1903026"}


id: PBO:0069296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 552, pseudogene","termid":"PBO:0069296"}


id: GO:0009941
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast envelope","termid":"GO:0009941"}


id: FYPO:0004086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromere clustering is abnormal during one or both meiotic nuclear divisions. Centromeres are normally located in one or two clusters away from the spindle pole body during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement","termid":"FYPO:0007163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal meiotic centromere clustering","synonyms":[{"name":"abnormal centromere clustering during meiosis","type":"exact"},{"name":"abnormal chromosome retrieval during meiosis","type":"related"},{"name":"abnormal kinetochore retrieval during meiosis","type":"related"},{"name":"increased unclustered centromeres during meiosis","type":"related"}],"termid":"FYPO:0004086"}


id: PBO:0050223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 1","termid":"PBO:0050223"}


id: PBO:0109515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VCP nuclear cofactor family member 2","termid":"PBO:0109515"}


id: PBO:0078930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 1-2","termid":"PBO:0078930"}


id: PBO:0052071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin catalytic subunit A1","termid":"PBO:0052071"}


id: PBO:0057969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689b","termid":"PBO:0057969"}


id: PBO:0048640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 10","termid":"PBO:0048640"}


id: PBO:0087962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transport adaptor or symportin; assembly chaperone that co-translationally associates with nascent Rpl5p, preventing aggregation; facilitates synchronized nuclear coimport of two 5S-rRNA binding proteins, Rpl5p and Rpl11p, mediated by import receptor Kap104p; required for biogenesis of the large ribosomal subunit; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0087962"}


id: PBO:0029395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029395"}


id: PBO:0058444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5009","termid":"PBO:0058444"}


id: PBO:0087378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol-binding beta-propeller protein; physically associates with sterol-binding StARkin domain-containing proteins Ysp2/Lam2/Ltc4 and Lam4/Ltc3; essential for retrograde transport of ergosterol from the plasma membrane to the endoplasmic reticulum at ER-PM contact sites; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; non-essential gene; has a paralog, DGR2, that arose from the whole genome duplication","termid":"PBO:0087378"}


id: GO:0031298
data:
  {"annotated_genes":["SJAG_02724","SJAG_03097","SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95456,102720,104607],"is_not":false,"summary":null,"term":"GO:0031298"}]},"cv_name":"cellular_component","definition":"A protein complex conserved in eukaryotes and associated with the replication fork; the complex stabilizes stalled replication forks and is thought to be involved in coordinating leading- and lagging-strand synthesis and in replication checkpoint signaling.","definition_xrefs":["PMID:15367656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear replication fork","termid":"GO:0043596"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02724":null,"SJAG_03097":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"replication fork protection complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Swi1-Swi3 complex","type":"narrow"},{"name":"TIMELESS-TIPIN complex","type":"narrow"},{"name":"replisome progression complex","type":"exact"}],"termid":"GO:0031298","terms_by_termid":{"GO:0031298":null}}


id: GO:0141198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which ubiquitin monomers are attached to a protein, and then ubiquitin polymers are formed by linkages between lysine residues at various positions of the ubiquitin monomers, forming branched linkages, such as K11/K48- or K11/K63-linked chains.","definition_xrefs":["PMID:37325469","PMID:29033132","PMID:29378950","PMID:31998699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein branched polyubiquitination","termid":"GO:0141198"}


id: PBO:0033806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-telomeric_3'_overhang_absent","termid":"PBO:0033806"}


id: PBO:0061075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor interacting Ras like 2","termid":"PBO:0061075"}


id: PBO:0085190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two type I myosins; localizes to actin cortical patches; deletion of MYO3 has little effect on growth, but myo3 myo5 double deletion causes severe defects in growth and actin cytoskeleton organization; MYO3 has a paralog, MYO5, that arose from the whole genome duplication","termid":"PBO:0085190"}


id: GO:0033875
data:
  {"annotated_genes":["SJAG_02006","SJAG_00982","SJAG_03313","SJAG_03731","SJAG_04288","SJAG_01187","SJAG_04007","SJAG_03715","SJAG_03909","SJAG_02741","SJAG_03471","SJAG_02158","SJAG_00866","SJAG_04865","SJAG_01139","SJAG_02769","SJAG_00902","SJAG_03813","SJAG_01402","SJAG_04627","SJAG_04499","SJAG_03064","SJAG_02380","SJAG_01524","SJAG_01474","SJAG_03349","SJAG_01989","SJAG_00427","SJAG_02247","SJAG_05277","SJAG_00947","SJAG_04895","SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89347,94487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[112191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[83562,114526,110333,91110,95131,104687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[87542,111846,110439,94151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006084"},{"annotations":[92926,104806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006637"},{"annotations":[88320,113137,85497,110930,106699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[95942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[84833,92701,90551,110994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[103569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[101684,109519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"},{"annotations":[94466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[107465,111564],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001211"},{"annotations":[86037,111061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a ribonucleoside bisphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate metabolic process","termid":"GO:0033865"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00427":null,"SJAG_00866":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_00982":null,"SJAG_01139":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_01474":null,"SJAG_01524":null,"SJAG_01989":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02247":null,"SJAG_02380":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03313":null,"SJAG_03349":null,"SJAG_03471":null,"SJAG_03715":null,"SJAG_03731":null,"SJAG_03813":null,"SJAG_03909":null,"SJAG_04007":null,"SJAG_04288":null,"SJAG_04499":null,"SJAG_04627":null,"SJAG_04865":null,"SJAG_04895":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"ribonucleoside bisphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribonucleoside bisphosphate metabolism","type":"exact"}],"termid":"GO:0033875","terms_by_termid":{"GO:0006084":null,"GO:0006085":null,"GO:0006086":null,"GO:0006104":null,"GO:0006637":null,"GO:0015937":null,"GO:0015938":null,"GO:0019287":null,"GO:0019427":null,"GO:0035336":null,"GO:0035338":null,"GO:1990181":null,"GO:2001211":null,"GO:2001295":null}}


id: GO:0061313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands and contributing to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in heart development","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in heart development","type":"exact"}],"termid":"GO:0061313"}


id: GO:0033497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sinapate, (2E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"sinapate metabolic process","termid":"GO:0033496"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"sinapate biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5168"],"synonyms":[{"name":"sinapate anabolism","type":"exact"},{"name":"sinapate biosynthesis","type":"exact"},{"name":"sinapate formation","type":"exact"},{"name":"sinapate synthesis","type":"exact"}],"termid":"GO:0033497"}


id: GO:0045249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytosolic complex of a regulatory and catalytic subunit that catalyzes the dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex.","definition_xrefs":["GOC:mtg_sensu","PMID:9395502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045253"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005829","GO:0032991"],"is_obsolete":false,"name":"cytosol pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045249"}


id: PBO:0109127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cripto, EGF-CFC family member","termid":"PBO:0109127"}


id: GO:0018006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glucuronylation of the N-terminal amino acid of proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glucuronylation","termid":"GO:0018321"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"N-terminal protein amino acid glucuronylation","termid":"GO:0018006"}


id: PBO:0091220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acyl DHAP reductase Ayr2","termid":"PBO:0091220"}


id: PBO:0047542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 1","termid":"PBO:0047542"}


id: PBO:0062131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 11","termid":"PBO:0062131"}


id: GO:0031821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a metabotropic serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"G protein-coupled serotonin receptor binding","synonyms":[{"name":"G-protein coupled serotonin receptor binding","type":"exact"},{"name":"metabotropic 5-hydroxytryptamine receptor binding","type":"exact"},{"name":"metabotropic serotonin receptor binding","type":"exact"},{"name":"metabotropic serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031821"}


id: PBO:0084663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial 3-oxoacyl-[acyl-carrier-protein] reductase; may comprise a type II mitochondrial fatty acid synthase along with Mct1p; human homolog CBR4 complements yeast null mutant","termid":"PBO:0084663"}


id: GO:0031845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5 neuropeptide Y receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor binding","termid":"GO:0031841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 5 neuropeptide Y receptor binding","synonyms":[{"name":"type 5 neuropeptide Y receptor ligand","type":"narrow"}],"termid":"GO:0031845"}


id: GO:0016507
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multienzyme complex possessing three activities in two subunits (alpha and beta) that catalyzes three steps of the fatty acid beta-oxidation cycle within the mitochondrial matrix. The alpha subunit comprises the enoyl-CoA hydratase (ECH) and 3-hydroxyacyl-CoA dehydrogenase (HACD) activities, and the beta subunit contains the acetyl-CoA C-acyltransferase (KACT)/thiolase activity.","definition_xrefs":["PMID:29915090","GOC:sjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation multienzyme complex","termid":"GO:0036125"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"mitochondrial fatty acid beta-oxidation multienzyme complex","synonyms":[{"name":"fatty acid beta-oxidation multienzyme complex","type":"broad"},{"name":"trifunctional enzyme","type":"related"}],"termid":"GO:0016507"}


id: PBO:0042209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin J like","termid":"PBO:0042209"}


id: PBO:0027281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination_at_M26_site","termid":"PBO:0027281"}


id: PBO:0054984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2398","termid":"PBO:0054984"}


id: GO:0047900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + formate = ADP + formyl phosphate + H+.","definition_xrefs":["EC:2.7.2.6","RHEA:16009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"formate kinase activity","secondary_identifiers":["KEGG_REACTION:R00518","MetaCyc:FORMATE-KINASE-RXN"],"synonyms":[{"name":"ATP:formate phosphotransferase activity","type":"related"}],"termid":"GO:0047900"}


id: PBO:0036186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036186"}


id: PBO:0088290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S26","termid":"PBO:0088290"}


id: PBO:0017570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-5'-phosphatase (predicted)","termid":"PBO:0017570"}


id: GO:0060310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of elastin catabolism, the chemical reactions and pathways resulting in the breakdown of elastin.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"is_a","term_name":"regulation of glycoprotein metabolic process","termid":"GO:1903018"},{"relation_name":"regulates","term_name":"elastin catabolic process","termid":"GO:0060309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of elastin catabolic process","synonyms":[{"name":"regulation of elastin breakdown","type":"related"},{"name":"regulation of elastin catabolism","type":"exact"},{"name":"regulation of elastin degradation","type":"exact"}],"termid":"GO:0060310"}


id: FYPO:0001038
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115388],"is_not":false,"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"},{"relation_name":"is_a","term_name":"increased protein phosphorylation","termid":"FYPO:0002680"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null,"SJAG_04551":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"increased protein phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001038","terms_by_termid":{"FYPO:0001038":null}}


id: PR:O60142
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr2 gene.","definition_xrefs":["UniProtKB:O60142","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.11c","synonyms":[{"name":"Spom972h-ppr2","type":"exact"}],"termid":"PR:O60142"}


id: PBO:0066629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA sensor RIG-I","termid":"PBO:0066629"}


id: PBO:0063623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFKP divergent transcript","termid":"PBO:0063623"}


id: GO:0071205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the juxtaparanode region of an axon.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to axon","termid":"GO:0099612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to juxtaparanode region of axon","synonyms":[{"name":"protein localisation to juxtaparanode region of axon","type":"exact"}],"termid":"GO:0071205"}


id: GO:0140058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a neuron projection are generated and organized into branches. A neuron projection is any process extending from a neural cell, such as axons or dendrites.","definition_xrefs":["GOC:bc","PMID:23270857","GOC:aruk","PMID:17114044","PMID:23764288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection arborization","synonyms":[{"name":"branching morphogenesis of a neurite","type":"related"},{"name":"branching morphogenesis of a neuron projection","type":"related"},{"name":"neurite arborization","type":"exact"},{"name":"neurite branching","type":"exact"},{"name":"neuron projection branching","type":"exact"}],"termid":"GO:0140058"}


id: GO:0180006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat--phospho-L-serine (consensus YSPTSPS)(position 2) + H2O = RNA polymerase II large subunit + phosphate.","definition_xrefs":["PMID:22622228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat phosphatase activity","termid":"GO:0008420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016788","GO:0004721","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain S2 phosphatase activity","type":"exact"}],"termid":"GO:0180006"}


id: GO:0039574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host TYK2 (tyrosine kinase 2). TYK2 is an intracellular signal-transducing tyrosine kinase involved in numerous cytokines and interferons signaling pathways and transmits the cytokine signal by phosphorylating receptor subunits.","definition_xrefs":["PMID:19085955","PMID:16987978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of host TYK2 activity","secondary_identifiers":["VZ:720"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of host TYK2 activity","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of host TYK2 activity","type":"narrow"},{"name":"suppression by virus of host TYK2 activity","type":"narrow"},{"name":"suppression by virus of host non-receptor tyrosine-protein kinase TYK2 activity","type":"narrow"}],"termid":"GO:0039574"}


id: GO:1900834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of emericellin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900183"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"emericellin biosynthetic process","termid":"GO:1900766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"regulation of emericellin biosynthetic process","synonyms":[{"name":"regulation of Variecoxanthone B anabolism","type":"related"},{"name":"regulation of Variecoxanthone B biosynthesis","type":"related"},{"name":"regulation of Variecoxanthone B biosynthetic process","type":"related"},{"name":"regulation of Variecoxanthone B formation","type":"related"},{"name":"regulation of Variecoxanthone B synthesis","type":"related"},{"name":"regulation of emericellin anabolism","type":"exact"},{"name":"regulation of emericellin biosynthesis","type":"exact"},{"name":"regulation of emericellin formation","type":"exact"},{"name":"regulation of emericellin synthesis","type":"exact"}],"termid":"GO:1900834"}


id: GO:0051311
data:
  {"annotated_genes":["SJAG_05266","SJAG_03926","SJAG_05319","SJAG_01278","SJAG_00794","SJAG_01837","SJAG_05019","SJAG_03698","SJAG_00678","SJAG_05295","SJAG_02731","SJAG_01224","SJAG_07002","SJAG_04508","SJAG_01805","SJAG_00418","SJAG_03327","SJAG_03989","SJAG_02814","SJAG_01211","SJAG_04259","SJAG_03683","SJAG_00918","SJAG_01371","SJAG_03437","SJAG_03220","SJAG_04076","SJAG_02346","SJAG_05220","SJAG_03217","SJAG_01775"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112764],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051316"},{"annotations":[89932,84005],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[97432,94725,89896,86403,103919,83951,111621,113145,109884],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[112779],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[106452,87090,104982,97436,113008,110194,105990,85266,85872,94017,106411,101563,103923,109334,91671,96621,112017,98544,103602,91417,94733,105243,89913],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"A chromosome localization process whereby chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator), during meiotic chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase chromosome alignment","termid":"GO:0051310"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00678":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04259":null,"SJAG_04508":null,"SJAG_05019":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013","GO:0051179"],"is_obsolete":false,"name":"meiotic metaphase chromosome alignment","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"metaphase plate congression during meiosis","type":"exact"}],"termid":"GO:0051311","terms_by_termid":{"GO:0031619":null,"GO:0051316":null,"GO:0051455":null,"GO:0051456":null,"GO:1904967":null}}


id: FYPO:0001824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to trifluoperazine. Cells stop growing (and may die) at a concentration of trifluoperazine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to trifluoperazine","synonyms":[{"name":"hypersensitive to trifluoperazine","type":"exact"},{"name":"sensitive to trifluoperazine during mitotic cell cycle","type":"related"},{"name":"sensitive to trifluoperazine during vegetative growth","type":"exact"}],"termid":"FYPO:0001824"}


id: PBO:0045771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular matrix protein 1 pseudogene 2","termid":"PBO:0045771"}


id: GO:0033103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins are transferred into the extracellular milieu or directly into host cells by the type VI secretion system. Proteins secreted by this system do not require an N-terminal signal sequence.","definition_xrefs":["PMID:16432199","PMID:16763151","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"protein secretion by the type VI secretion system","synonyms":[{"name":"protein secretion by the T6SS","type":"exact"},{"name":"protein secretion by the type VI protein secretion system","type":"exact"},{"name":"type VI protein secretion system","type":"exact"}],"termid":"GO:0033103"}


id: FYPO:0007299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein aggregate center formation is decreased. Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein aggregate center formation","termid":"FYPO:0007298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein aggregate center formation","synonyms":[{"name":"decreased PAC formation","type":"exact"},{"name":"decreased protein aggregate center formation during mitotic cell cycle","type":"related"},{"name":"decreased protein aggregate center formation during vegetative growth","type":"exact"},{"name":"decreased protein aggregate centre formation","type":"exact"},{"name":"reduced protein aggregate center formation","type":"exact"}],"termid":"FYPO:0007299"}


id: SO:1000055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The DNA mutation changes, usually destroys, the first coding triplet of a gene. Usually prevents translation although another initiator codon may be used.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000055 sequence_variant_causing_initiator_codon_change_in_transcript (obsolete SO:1000055)","synonyms":[{"name":"mutation causing initiator codon change in transcript","type":"related"},{"name":"sequence variant causing initiator codon change in transcript","type":"exact"}],"termid":"SO:1000055"}


id: PBO:0027577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth","termid":"PBO:0027577"}


id: GO:0014010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:ef","ISBN:0878932585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell proliferation","termid":"GO:0014009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell proliferation","termid":"GO:0014010"}


id: FYPO:0003275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nitrite ions. Cells stop growing (and may die) at a concentration of nitrite ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to nitrite","synonyms":[{"name":"hypersensitive to nitrite","type":"exact"},{"name":"sensitive to nitrite during mitotic cell cycle","type":"related"},{"name":"sensitive to nitrite during vegetative growth","type":"exact"},{"name":"sensitive to nitrite ions","type":"exact"}],"termid":"FYPO:0003275"}


id: PBO:0041673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CADM1 antisense RNA 1","termid":"PBO:0041673"}


id: PBO:0034556
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_microtubule-based_movement","termid":"PBO:0034556"}


id: GO:0075049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont cell wall strengthening during entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of symbiont cell wall strengthening involved in entry into host (obsolete GO:0075049)","synonyms":[{"name":"modulation of symbiont cell wall strengthening during entry into host","type":"related"}],"termid":"GO:0075049"}


id: GO:0045854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which bicoid mRNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bicoid mRNA localization","termid":"GO:0008359"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"is_a","term_name":"positive regulation of intracellular mRNA localization","termid":"GO:1904582"},{"relation_name":"positively_regulates","term_name":"bicoid mRNA localization","termid":"GO:0045450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bicoid mRNA localization","synonyms":[{"name":"activation of bicoid mRNA localization","type":"narrow"},{"name":"positive regulation of bicoid mRNA localisation","type":"exact"},{"name":"stimulation of bicoid mRNA localization","type":"narrow"},{"name":"up regulation of bicoid mRNA localization","type":"exact"},{"name":"up-regulation of bicoid mRNA localization","type":"exact"},{"name":"upregulation of bicoid mRNA localization","type":"exact"}],"termid":"GO:0045854"}


id: PBO:0030981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere","termid":"PBO:0030981"}


id: PBO:0089193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Dlc2","termid":"PBO:0089193"}


id: PBO:0048044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin like 1","termid":"PBO:0048044"}


id: GO:0015054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gastrin and transmitting the signal across the membrane by activating an associated G-protein to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"gastrin receptor activity","synonyms":[{"name":"cholecystokinin-B receptor activity","type":"related"}],"termid":"GO:0015054"}


id: FYPO:0002007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosomes form a single, irregularly-shaped mass in the nucleus.","definition_xrefs":["PMID:19074598","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000654","FYPO:0000652","FYPO:0005447","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000641"],"is_obsolete":false,"name":"abnormal chromosome morphology, single irregular mass","synonyms":[{"name":"abnormal chromatin organization with single irregular mass of chromatin","type":"related"},{"name":"abnormal chromosome morphology, single irregular mass during mitotic cell cycle","type":"related"},{"name":"abnormal chromosome morphology, single irregular mass during vegetative growth","type":"exact"}],"termid":"FYPO:0002007"}


id: GO:0001917
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs.","definition_xrefs":["PMID:12019563","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor inner segment","termid":"GO:0001917"}


id: GO:1903780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac conduction.","definition_xrefs":["GOC:rph","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GO_REF:0000058","GOC:BHF","PMID:12967627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of cardiac conduction","termid":"GO:1903779"},{"relation_name":"negatively_regulates","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac conduction","synonyms":[{"name":"down regulation of cardiac conduction","type":"exact"},{"name":"down-regulation of cardiac conduction","type":"exact"},{"name":"downregulation of cardiac conduction","type":"exact"},{"name":"inhibition of cardiac conduction","type":"narrow"}],"termid":"GO:1903780"}


id: GO:2000629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of miRNA metabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of miRNA metabolic process","termid":"GO:2000628"},{"relation_name":"negatively_regulates","term_name":"miRNA metabolic process","termid":"GO:0010586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA metabolic process","synonyms":[{"name":"negative regulation of microRNA metabolic process","type":"exact"}],"termid":"GO:2000629"}


id: PBO:0088764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical anchoring factor, pleckstrin homology domain","termid":"PBO:0088764"}


id: PBO:0081825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF747 divergent transcript","termid":"PBO:0081825"}


id: FYPO:0004595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which gamma-tubulin complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal gamma-tubulin complex assembly","synonyms":[{"name":"abnormal gamma-tubulin complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal gamma-tubulin complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0004595"}


id: PBO:0040448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP10A divergent transcript","termid":"PBO:0040448"}


id: PBO:0053334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 174","termid":"PBO:0053334"}


id: PR:Q09685
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dre4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor dre4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.02","synonyms":[{"name":"DNA replication protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dre4","type":"exact"},{"name":"hyphal growth protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09685"}


id: PR:Q9USR0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA excision repair protein ERCC-8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02583","PANTHER:PTHR22850:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA excision repair protein ckn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.09","secondary_identifiers":["UniProtKB:Q9USR0"],"synonyms":[{"name":"Spom972h-ERCC8","type":"exact"}],"termid":"PR:Q9USR0"}


id: PBO:0066114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras interacting protein 1","termid":"PBO:0066114"}


id: GO:0045703
data:
  {"annotated_genes":["SJAG_00630"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94308],"is_not":false,"summary":null,"term":"GO:0045703"}]},"cv_name":"molecular_function","definition":"Catalysis of the reduction of a ketone group to form the corresponding alcohol.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00630":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ketoreductase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045703","terms_by_termid":{"GO:0045703":null}}


id: PBO:0066929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 231","termid":"PBO:0066929"}


id: GO:1901043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein polyubiquitination that is involved in cellular response to misfolded protein.","definition_xrefs":["PMID:21324894","GOC:al","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete protein polyubiquitination involved in cellular response to misfolded protein (obsolete GO:1901043)","synonyms":[{"name":"polyubiquitin of cellular response to misfolded protein","type":"related"},{"name":"protein polyubiquitination involved in cellular response to misfolded protein","type":"exact"},{"name":"protein polyubiquitination of cellular response to misfolded protein","type":"exact"},{"name":"protein polyubiquitinylation of cellular response to misfolded protein","type":"exact"},{"name":"protein polyubiquitylation of cellular response to misfolded protein","type":"exact"}],"termid":"GO:1901043"}


id: PBO:0039635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amine oxidase copper containing 3","termid":"PBO:0039635"}


id: PBO:0071147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 11","termid":"PBO:0071147"}


id: PR:Q10352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F12.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F12.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.10c","synonyms":[{"name":"Spom972h-SPAC1F12.10c","type":"exact"}],"termid":"PR:Q10352"}


id: GO:0048445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the carpel are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"carpel development","termid":"GO:0048440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carpel morphogenesis","secondary_identifiers":["GO:0048430"],"termid":"GO:0048445"}


id: PBO:0066954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 256","termid":"PBO:0066954"}


id: PBO:0062073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 4 pseudogene","termid":"PBO:0062073"}


id: GO:1905753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of argininosuccinate synthase activity.","definition_xrefs":["PMID:19491403","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of argininosuccinate synthase activity (obsolete GO:1905753)","synonyms":[{"name":"activation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"narrow"},{"name":"activation of arginine succinate synthetase activity","type":"narrow"},{"name":"activation of argininosuccinate synthase activity","type":"narrow"},{"name":"activation of argininosuccinate synthetase activity","type":"narrow"},{"name":"activation of argininosuccinic acid synthetase activity","type":"narrow"},{"name":"activation of arginosuccinate synthetase activity","type":"narrow"},{"name":"activation of citrulline--aspartate ligase activity","type":"narrow"},{"name":"positive regulation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"exact"},{"name":"positive regulation of arginine succinate synthetase activity","type":"exact"},{"name":"positive regulation of argininosuccinate synthetase activity","type":"exact"},{"name":"positive regulation of argininosuccinic acid synthetase activity","type":"exact"},{"name":"positive regulation of arginosuccinate synthetase activity","type":"exact"},{"name":"positive regulation of citrulline--aspartate ligase activity","type":"exact"},{"name":"up regulation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"exact"},{"name":"up regulation of arginine succinate synthetase activity","type":"exact"},{"name":"up regulation of argininosuccinate synthase activity","type":"exact"},{"name":"up regulation of argininosuccinate synthetase activity","type":"exact"},{"name":"up regulation of argininosuccinic acid synthetase activity","type":"exact"},{"name":"up regulation of arginosuccinate synthetase activity","type":"exact"},{"name":"up regulation of citrulline--aspartate ligase activity","type":"exact"},{"name":"up-regulation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"exact"},{"name":"up-regulation of arginine succinate synthetase activity","type":"exact"},{"name":"up-regulation of argininosuccinate synthase activity","type":"exact"},{"name":"up-regulation of argininosuccinate synthetase activity","type":"exact"},{"name":"up-regulation of argininosuccinic acid synthetase activity","type":"exact"},{"name":"up-regulation of arginosuccinate synthetase activity","type":"exact"},{"name":"up-regulation of citrulline--aspartate ligase activity","type":"exact"},{"name":"upregulation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"exact"},{"name":"upregulation of arginine succinate synthetase activity","type":"exact"},{"name":"upregulation of argininosuccinate synthase activity","type":"exact"},{"name":"upregulation of argininosuccinate synthetase activity","type":"exact"},{"name":"upregulation of argininosuccinic acid synthetase activity","type":"exact"},{"name":"upregulation of arginosuccinate synthetase activity","type":"exact"},{"name":"upregulation of citrulline--aspartate ligase activity","type":"exact"}],"termid":"GO:1905753"}


id: PBO:0041854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 2","termid":"PBO:0041854"}


id: PBO:0054002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1327","termid":"PBO:0054002"}


id: PBO:0003414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc knuckle TRAMP complex subunit Air1","termid":"PBO:0003414"}


id: PBO:0034503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_vacuolar_membrane","termid":"PBO:0034503"}


id: GO:0004721
data:
  {"annotated_genes":["SJAG_00600","SJAG_03631","SJAG_01672","SJAG_00082","SJAG_03263","SJAG_01187","SJAG_04332","SJAG_04262","SJAG_01161","SJAG_00214","SJAG_03482","SJAG_04128","SJAG_03624","SJAG_03126","SJAG_01906","SJAG_03893","SJAG_04166","SJAG_00823","SJAG_04426","SJAG_02000","SJAG_03310","SJAG_01790","SJAG_01286","SJAG_02389","SJAG_02433","SJAG_02203","SJAG_02536","SJAG_02013","SJAG_01667","SJAG_03185","SJAG_02854"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86125,89559,90652,96375,98675,100594,108452,109469,109912,111566],"is_not":false,"summary":null,"term":"GO:0004721"},{"annotations":[83995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004741"},{"annotations":[109467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004723"},{"annotations":[109468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033192"},{"annotations":[93737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033549"},{"annotations":[92084,113164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990439"},{"annotations":[87762,99911,91143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033550"},{"annotations":[99912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017017"},{"annotations":[83852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004726"},{"annotations":[110175,93308,108062,93738,89560,111567,113165,112686,100595,103505,92085,86126,94642,105830,106176,96376,85313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004722"},{"annotations":[84185,86127,108453,83853,101299,87763,90653,91144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004725"},{"annotations":[99913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008330"},{"annotations":[87705,89746,93309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008420"},{"annotations":[91945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180007"},{"annotations":[108063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cellular proteins and thereby provide an important mechanism for regulating cellular activity.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00214":null,"SJAG_00600":null,"SJAG_00823":null,"SJAG_01161":null,"SJAG_01187":null,"SJAG_01286":null,"SJAG_01667":null,"SJAG_01672":null,"SJAG_01790":null,"SJAG_01906":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02203":null,"SJAG_02389":null,"SJAG_02433":null,"SJAG_02536":null,"SJAG_02854":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03310":null,"SJAG_03482":null,"SJAG_03624":null,"SJAG_03631":null,"SJAG_03893":null,"SJAG_04128":null,"SJAG_04166":null,"SJAG_04262":null,"SJAG_04332":null,"SJAG_04426":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phosphoprotein phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-170153","Reactome:R-HSA-178178","Reactome:R-HSA-170158","Reactome:R-HSA-1363276","Reactome:R-HSA-174124","Reactome:R-HSA-2529015","Reactome:R-HSA-113503","Reactome:R-HSA-69199","Reactome:R-HSA-1363274","Reactome:R-HSA-112383","Reactome:R-HSA-167072","Reactome:R-HSA-170161","Reactome:R-HSA-174110","Reactome:R-HSA-9636684"],"synonyms":[{"name":"phosphoprotein phosphohydrolase activity","type":"exact"},{"name":"protein phosphatase activity","type":"exact"},{"name":"protein phosphatase-1 activity","type":"narrow"},{"name":"protein phosphatase-2A activity","type":"narrow"},{"name":"protein phosphatase-2B activity","type":"narrow"},{"name":"protein phosphatase-2C activity","type":"narrow"}],"termid":"GO:0004721","terms_by_termid":{"GO:0004721":null,"GO:0004722":null,"GO:0004723":null,"GO:0004725":null,"GO:0004726":null,"GO:0004741":null,"GO:0008330":null,"GO:0008420":null,"GO:0017017":null,"GO:0033192":null,"GO:0033549":null,"GO:0033550":null,"GO:0180005":null,"GO:0180007":null,"GO:1990439":null}}


id: PBO:0041457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C10orf71 antisense RNA 1","termid":"PBO:0041457"}


id: PBO:0050762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 24","termid":"PBO:0050762"}


id: PBO:0044534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol lipase alpha","termid":"PBO:0044534"}


id: PBO:0014254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, human WDR24 family","termid":"PBO:0014254"}


id: PBO:0081917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 886, pseudogene","termid":"PBO:0081917"}


id: PBO:0085889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in nuclear processes of the Ran-GTPase cycle; involved in nuclear protein export; contains Ran Binding Domain and FxFG repeats; interacts with Srm1p, GTP-Gsp1p, Rna1p and Crm1p; relocalizes to the cytosol in response to hypoxia; not essential for viability","termid":"PBO:0085889"}


id: PBO:0074198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 8","termid":"PBO:0074198"}


id: PBO:0077119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 50","termid":"PBO:0077119"}


id: PBO:0003095
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.44","termid":"PBO:0003095"}


id: GO:0007548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the sex of an organism by physical differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex differentiation","secondary_identifiers":["Wikipedia:Sexual_differentiation"],"termid":"GO:0007548"}


id: PBO:0051834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 8","termid":"PBO:0051834"}


id: GO:0008188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neuropeptide to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neuropeptide receptor activity","termid":"GO:0008188"}


id: GO:0080189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of a plant structure from the time of its initiation by an apical meristem until its expansion is completed.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary growth","termid":"GO:0080189"}


id: FYPO:0008005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of reactive oxygen species (ROS) measured in a cell that is normal (i.e. indistinguishable from wild type) during stationary phase.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal reactive oxygen species level during stationary phase","synonyms":[{"name":"normal ROS accumulation during stationary phase","type":"related"},{"name":"normal ROS level during stationary phase","type":"exact"},{"name":"normal ROS level in stationary phase","type":"exact"},{"name":"normal reactive oxygen species accumulation during stationary phase","type":"related"},{"name":"normal reactive oxygen species level in stationary phase","type":"exact"}],"termid":"FYPO:0008005"}


id: PBO:0044337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 20","termid":"PBO:0044337"}


id: PBO:0067795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 97","termid":"PBO:0067795"}


id: FYPO:0007421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal in telomeric regions during G0 phase. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"},{"relation_name":"is_a","term_name":"abnormal transcription at telomere","termid":"FYPO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription at telomere during G0","synonyms":[{"name":"increased telomeric transcription during G0","type":"exact"},{"name":"increased transcription at telomere during cell quiescence","type":"exact"},{"name":"increased transcription at telomere during quiescence","type":"exact"},{"name":"increased transcription from telomere during G0","type":"exact"}],"termid":"FYPO:0007421"}


id: PBO:0052318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1143 pseudogene 2","termid":"PBO:0052318"}


id: PBO:0082568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone with a role in facilitating mitochondrial protein import; ascomycete-specific member of the DnaJ-like family, closely related to Ydj1p; predicted to be C-terminally prenylated; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0082568"}


id: PR:O94245
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC737.04 gene.","definition_xrefs":["UniProtKB:O94245","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 protein C737.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.04","synonyms":[{"name":"Spom972h-SPCC737.04","type":"exact"}],"termid":"PR:O94245"}


id: PBO:0002891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Dad3","termid":"PBO:0002891"}


id: PBO:0090097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-UTP complex subunit Utp8","termid":"PBO:0090097"}


id: GO:1903484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of mitotic actomyosin contractile ring localization.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of maintenance of mitotic actomyosin contractile ring localization (obsolete GO:1903484)","synonyms":[{"name":"down regulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"down regulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"down regulation of maintenance of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"down-regulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"down-regulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"down-regulation of maintenance of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"downregulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"downregulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"downregulation of maintenance of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"inhibition of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"inhibition of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"},{"name":"inhibition of maintenance of mitotic actomyosin contractile ring localization","type":"narrow"},{"name":"negative regulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"negative regulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903484"}


id: GO:0010029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seed germination.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seedling development","termid":"GO:1900140"},{"relation_name":"regulates","term_name":"seed germination","termid":"GO:0009845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed germination","termid":"GO:0010029"}


id: PBO:0061504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRSN2 antisense RNA 1","termid":"PBO:0061504"}


id: PBO:0062462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 149 pseudogene","termid":"PBO:0062462"}


id: GO:0045686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glia cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gliogenesis","termid":"GO:0014014"},{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"negatively_regulates","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell differentiation","synonyms":[{"name":"down regulation of glial cell differentiation","type":"exact"},{"name":"down-regulation of glial cell differentiation","type":"exact"},{"name":"downregulation of glial cell differentiation","type":"exact"},{"name":"inhibition of glial cell differentiation","type":"narrow"},{"name":"negative regulation of glia cell differentiation","type":"exact"},{"name":"negative regulation of neuroglia differentiation","type":"exact"}],"termid":"GO:0045686"}


id: GO:0098868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a bone that contributes to the shaping of that bone.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ growth","termid":"GO:0035265"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone growth","termid":"GO:0098868"}


id: GO:1903871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a DNA recombinase mediator complex.","definition_xrefs":["GOC:TermGenie","GOC:rb","PMID:18347097","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair complex assembly","termid":"GO:0090735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"DNA recombinase mediator complex assembly","synonyms":[{"name":"DNA recombinase mediator complex formation","type":"exact"}],"termid":"GO:1903871"}


id: MOD:01981
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-threonine residue by a thioether bond to form 3-methyllanthionine with unresolved stereospecificity.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyllanthionine","synonyms":[{"name":"2,6-diamino-3-methyl-4-thiaheptanedioic acid","type":"exact"},{"name":"2-amino-3-([2-amino-2-carboxyethyl]sulfanyl)butanoic acid","type":"exact"},{"name":"2-amino-3-[(2-amino-2-carboxyethyl)thio]butanoic acid","type":"exact"},{"name":"2-azanyl-3-[(2-azanyl-2-carboxyethyl)sulfanyl]butanoic acid","type":"exact"},{"name":"3-methyllanthionine","type":"exact"},{"name":"cysteine-3-L-butyrine thioether","type":"exact"}],"termid":"MOD:01981"}


id: PBO:0078662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 15-1","termid":"PBO:0078662"}


id: PBO:0081004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 41","termid":"PBO:0081004"}


id: FYECO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which an iron chelator was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ iron chelator","termid":"FYECO:0000340"}


id: PBO:0064862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 17","termid":"PBO:0064862"}


id: PBO:0081093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 20 pseudogene 2","termid":"PBO:0081093"}


id: GO:0009131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine nucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate catabolic process","termid":"GO:0009125"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate metabolic process","termid":"GO:0009129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleoside monophosphate catabolic process","synonyms":[{"name":"pyrimidine nucleoside monophosphate breakdown","type":"exact"},{"name":"pyrimidine nucleoside monophosphate catabolism","type":"exact"},{"name":"pyrimidine nucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009131"}


id: GO:2001114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to hepatocyte growth factor stimulus.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to hepatocyte growth factor stimulus","termid":"GO:2001112"},{"relation_name":"positively_regulates","term_name":"cellular response to hepatocyte growth factor stimulus","termid":"GO:0035729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to hepatocyte growth factor stimulus","synonyms":[{"name":"positive regulation of cellular response to HGF stimulus","type":"exact"}],"termid":"GO:2001114"}


id: GO:0072286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric connecting tubule over time, from its formation to the mature structure. The metanephric connecting tubule is a tubular segment of the metanephric nephron; it connects the distal convoluted tubule to the collecting duct in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connecting tubule development","termid":"GO:0072027"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric connecting tubule development","synonyms":[{"name":"metanephric connecting duct development","type":"exact"}],"termid":"GO:0072286"}


id: GO:1901159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xylulose 5-phosphate.","definition_xrefs":["GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylulose 5-phosphate metabolic process","termid":"GO:0051167"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylulose 5-phosphate biosynthetic process","synonyms":[{"name":"xylulose 5-phosphate anabolism","type":"exact"},{"name":"xylulose 5-phosphate biosynthesis","type":"exact"},{"name":"xylulose 5-phosphate formation","type":"exact"},{"name":"xylulose 5-phosphate synthesis","type":"exact"}],"termid":"GO:1901159"}


id: GO:0032142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a single guanine insertion or a deletion that results in an unpaired guanine.","definition_xrefs":["GOC:vk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single base insertion or deletion binding","termid":"GO:0032138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"single guanine insertion binding","termid":"GO:0032142"}


id: GO:1990586
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for prokaryotic cell division (FtsZ-dependent cytokinesis). These complexes are assembled and recruited to the cell septum in a strictly controlled sequence and co-ordinate invagination of the cell membrane, inward growth of the peptidoglycan layer, constriction of the outer membrane and separation of daughter cells.","definition_xrefs":["GOC:bhm","PMID:21784946","PMID:15165235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cell septum","termid":"GO:0030428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"divisome complex","termid":"GO:1990586"}


id: GO:0014730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of muscle tissue to repair injured or damaged muscle fibers in the postnatal stage at the neuromuscular junction. Regeneration of neuromuscular junctions occurs in an orderly way and relies on communication between nerve and muscle. Skeletal myofibers regenerate after injury and form neuro-muscular junctions with motor axons similar to normal ones. Regenerating myofibers develop within the basal lamina sheaths (satellite cells) of original myofibers.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle regeneration at neuromuscular junction","termid":"GO:0014730"}


id: PBO:0050221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 38","termid":"PBO:0050221"}


id: GO:1901456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to toluene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to toluene","termid":"GO:1901454"},{"relation_name":"positively_regulates","term_name":"response to toluene","termid":"GO:1901424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to toluene","synonyms":[{"name":"activation of response to toluene","type":"narrow"},{"name":"up regulation of response to toluene","type":"exact"},{"name":"up-regulation of response to toluene","type":"exact"},{"name":"upregulation of response to toluene","type":"exact"}],"termid":"GO:1901456"}


id: GO:0034318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to an oxygen atom on an alcohol acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"alcohol O-acyltransferase activity","synonyms":[{"name":"AEATase activity","type":"narrow"},{"name":"acyl-CoA:alcohol O-acyltransferase activity","type":"exact"},{"name":"acyl-CoA:ethanol O-acyltransferase","type":"narrow"},{"name":"acyl-coenzymeA:alcohol O-acyltransferase activity","type":"exact"},{"name":"acyl-coenzymeA:ethanol O-acyltransferase activity","type":"narrow"},{"name":"alcohol acyltransferase activity","type":"exact"}],"termid":"GO:0034318"}


id: PBO:0018027
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae POL2","termid":"PBO:0018027"}


id: PR:P87323
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcs4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"response regulator mcs4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.10","synonyms":[{"name":"Spom972h-mcs4","type":"exact"},{"name":"mitotic catastrophe suppressor 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87323"}


id: PBO:0072781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 activating enzyme subunit 1","termid":"PBO:0072781"}


id: PBO:0050773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-thioester dehydratase type 2","termid":"PBO:0050773"}


id: GO:0047219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-menthol + UDP-D-glucose = (-)-menthyl beta-D-glucoside + H+ + UDP.","definition_xrefs":["RHEA:11520","EC:2.4.1.127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"monoterpenol beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.127-RXN","KEGG_REACTION:R02179"],"synonyms":[{"name":"UDP-glucose:(-)-menthol O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:(-)-menthol O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:monoterpenol glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-monoterpenol glucosyltransferase activity","type":"related"}],"termid":"GO:0047219"}


id: PBO:0081365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 202","termid":"PBO:0081365"}


id: PBO:0011124
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Warsaw breakage syndrome","termid":"PBO:0011124"}


id: PBO:0017438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_transport_of","termid":"PBO:0017438"}


id: FYPO:0004805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell wall organization is abnormal. Cell wall organization results in the assembly, arrangement of constituent parts, or disassembly of the fungal-type cell wall.","definition_xrefs":["GO:0031505","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell wall organization","synonyms":[{"name":"abnormal cell wall organisation","type":"related"},{"name":"abnormal fungal-type cell wall organization","type":"exact"}],"termid":"FYPO:0004805"}


id: GO:2001037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tongue muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle fiber differentiation","termid":"GO:1902811"},{"relation_name":"is_a","term_name":"regulation of tongue muscle cell differentiation","termid":"GO:2001035"},{"relation_name":"positively_regulates","term_name":"tongue muscle cell differentiation","termid":"GO:0035981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tongue muscle cell differentiation","termid":"GO:2001037"}


id: PBO:0109622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase 2B (pseudogene)","termid":"PBO:0109622"}


id: GO:0021569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 3 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GOC:dgh","GO_REF:0000021","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 3 development","termid":"GO:0021569"}


id: SO:0000634
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that encodes multiple proteins from at least two non-overlapping regions.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"polycistronic","termid":"SO:0000880"},{"relation_name":"is_a","term_name":"polycistronic_transcript","termid":"SO:0000078"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycistronic_mRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Polycistronic_mRNA"],"synonyms":[{"name":"polycistronic mRNA","type":"exact"},{"name":"polycistronic processed transcript","type":"related"}],"termid":"SO:0000634"}


id: PBO:0053436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 381","termid":"PBO:0053436"}


id: GO:0043733
data:
  {"annotated_genes":["SJAG_01971","SJAG_05257"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97680,73579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008725"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 3-methylbase + H2O = DNA with abasic site + 3-methylbase. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 3-methylpurine or 3-methylpyrimidine base and the deoxyribose sugar to remove the methylated base, leaving an apurinic or apyrimidinic site.","definition_xrefs":["PMID:10777493","PMID:14517230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylbase DNA N-glycosylase activity","termid":"GO:0003905"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01971":null,"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0140097","GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"DNA-3-methylbase glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA-3-methyladenine glycosylase III","type":"related"},{"name":"Mag III","type":"narrow"},{"name":"MagIII","type":"narrow"}],"termid":"GO:0043733","terms_by_termid":{"GO:0008725":null}}


id: GO:0019330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aldoximes, compounds derived by the reaction of an aldose with hydroxylamine, thus containing the aldoxime group -HC=NOH.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aldoxime metabolic process","secondary_identifiers":["MetaCyc:P345-PWY"],"synonyms":[{"name":"aldoxime metabolism","type":"exact"}],"termid":"GO:0019330"}


id: GO:0098585
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host synaptic vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"},{"relation_name":"part_of","term_name":"host cell synaptic vesicle","termid":"GO:0098584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell synaptic vesicle membrane","termid":"GO:0098585"}


id: GO:0006166
data:
  {"annotated_genes":["SJAG_06634","SJAG_01070","SJAG_01859","SJAG_03096","SJAG_03881","SJAG_00134"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85900,89637,89859,111929],"is_not":false,"summary":null,"term":"GO:0006166"},{"annotations":[112932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[104597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"}]},"cv_name":"biological_process","definition":"Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine-containing compound salvage","termid":"GO:0043101"},{"relation_name":"is_a","term_name":"nucleoside salvage","termid":"GO:0043174"},{"relation_name":"is_a","term_name":"purine ribonucleoside biosynthetic process","termid":"GO:0046129"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00134":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleoside salvage","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:P121-PWY"],"termid":"GO:0006166","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null}}


id: GO:0061376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammillotegmental tract progresses over time, from its formation to the mature structure. The mammillotegmental tract is the collection of axons that connects the ventral diencephalon to the tegmentum and pons.","definition_xrefs":["PMID:10662642","GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary axonal complex development","termid":"GO:0061373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillotegmental axonal tract development","termid":"GO:0061376"}


id: PBO:0058851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8080","termid":"PBO:0058851"}


id: GO:1904374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a kainic acid stimulus.","definition_xrefs":["PMID:17443789","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to kainic acid","termid":"GO:1904373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to kainic acid","termid":"GO:1904374"}


id: GO:0097083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a vascular smooth muscle cell regardless of its environment; upon determination, the cell fate cannot be reversed. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell fate determination","termid":"GO:0007521"},{"relation_name":"part_of","term_name":"vascular associated smooth muscle cell fate commitment","termid":"GO:0097081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell fate determination","synonyms":[{"name":"vascular smooth muscle cell fate determination","type":"exact"}],"termid":"GO:0097083"}


id: PR:G2TRS2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new20 gene.","definition_xrefs":["UniProtKB:G2TRS2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.19","synonyms":[{"name":"Spom972h-new20","type":"exact"}],"termid":"PR:G2TRS2"}


id: GO:0004442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-myo-inositol 1,3-bisphosphate + H2O = D-myo-inositol 1-monophosphate + phosphate.","definition_xrefs":["EC:3.1.3.65","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol-1,4,-bisphosphate 3-phosphatase (obsolete GO:0004442)","synonyms":[{"name":"inositol-1,4,-bisphosphate 3-phosphatase","type":"exact"}],"termid":"GO:0004442"}


id: PATO:0000545
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000545 relative photosensitivity value (obsolete PATO:0000545)","termid":"PATO:0000545"}


id: PBO:0080581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 5B","termid":"PBO:0080581"}


id: GO:1904843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitroglycerin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:25626975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to nitroglycerin","termid":"GO:1904842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitroglycerin","synonyms":[{"name":"cellular response to nitroglycerine","type":"exact"},{"name":"cellular response to nitroglycerol","type":"exact"},{"name":"cellular response to trinitroglycerin","type":"exact"},{"name":"cellular response to trinitroglycerol","type":"exact"}],"termid":"GO:1904843"}


id: GO:0046433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-aminoethylphosphonate, most abundant and ubiquitous of naturally occurring phosphonates. It is typically found as a conjugate of glycans, lipids, and proteins, which in turn perform essential biochemical functions in specialized lower organisms.","definition_xrefs":["GOC:ai","PMID:12107130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-aminoethylphosphonate metabolic process","synonyms":[{"name":"2-aminoethylphosphonate metabolism","type":"exact"},{"name":"2-phosphonoethylamine metabolic process","type":"exact"},{"name":"2-phosphonoethylamine metabolism","type":"exact"},{"name":"ciliatine metabolic process","type":"exact"},{"name":"ciliatine metabolism","type":"exact"}],"termid":"GO:0046433"}


id: PBO:0065234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 2","termid":"PBO:0065234"}


id: FYPO:0002042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to iron ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to iron ion starvation","termid":"FYPO:0003196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to iron ion starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to iron ion starvation","type":"related"},{"name":"decreased RNA level during cellular response to iron ion depletion","type":"exact"},{"name":"decreased RNA level during cellular response to iron ion deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to iron ion starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to iron starvation","type":"exact"},{"name":"decreased RNA level during iron ion starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to iron ion starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to iron ion starvation","type":"exact"},{"name":"reduced RNA level during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0002042"}


id: GO:1990202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of FMN reductase activity. Reduces FMN to FMNH2 in a NAD(P)H-dependent manner. In E.coli, consists of a SsuE dimer.","definition_xrefs":["PMID:10480865","GOC:bhm","PMID:16997955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"FMN reductase complex","synonyms":[{"name":"FMN oxidoreductase complex, NAD(P)H-dependent","type":"related"},{"name":"FMN reductase complex, NAD(P)H-dependent","type":"exact"},{"name":"SsuE complex","type":"narrow"},{"name":"flavin oxidoreductase complex, NAD(P)H-dependent","type":"broad"}],"termid":"GO:1990202"}


id: PR:O74968
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 small nuclear ribonucleoprotein usp102 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.07c","synonyms":[{"name":"Spom972h-usp102","type":"exact"},{"name":"U1 snRNP protein usp102 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74968"}


id: GO:1905619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alpha-(1->3)-fucosyltransferase activity.","definition_xrefs":["GO_REF:0000059","PMID:15364955","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alpha-(1->3)-fucosyltransferase activity","synonyms":[{"name":"regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"regulation of alpha-1,3-fucosyltransferase activity","type":"exact"}],"termid":"GO:1905619"}


id: GO:0046097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of deoxyuridine, 2-deoxyribosyluracil, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyuridine metabolic process","termid":"GO:0046096"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside biosynthetic process","termid":"GO:0046126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"deoxyuridine biosynthetic process","synonyms":[{"name":"deoxyuridine anabolism","type":"exact"},{"name":"deoxyuridine biosynthesis","type":"exact"},{"name":"deoxyuridine formation","type":"exact"},{"name":"deoxyuridine synthesis","type":"exact"}],"termid":"GO:0046097"}


id: PR:O59719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrn6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3B8.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.11","synonyms":[{"name":"Spom972h-rrn6","type":"exact"}],"termid":"PR:O59719"}


id: PBO:0087718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for glucose repression, HO repression, RME1 repression and sporulation","termid":"PBO:0087718"}


id: PBO:0055694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb and CNS expressed 1 like","termid":"PBO:0055694"}


id: PBO:0051450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-37","termid":"PBO:0051450"}


id: PR:O94671
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC776.03 gene.","definition_xrefs":["UniProtKB:O94671","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.03","synonyms":[{"name":"HDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC776.03","type":"exact"}],"termid":"PR:O94671"}


id: PBO:0047812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N1","termid":"PBO:0047812"}


id: PBO:0003227
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae NCE102","termid":"PBO:0003227"}


id: PBO:0076320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNPO2L antisense RNA 1","termid":"PBO:0076320"}


id: PBO:0073510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 4A","termid":"PBO:0073510"}


id: MOD:00652
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a palmitoyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoylated residue","termid":"MOD:00440"},{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-palmitoylated residue","synonyms":[{"name":"O-hexadecanoylated residue","type":"exact"},{"name":"OPamRes","type":"exact"}],"termid":"MOD:00652"}


id: PBO:0066080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 8","termid":"PBO:0066080"}


id: PBO:0029318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation_at_subtelomere_during_mitotic_S_phase","termid":"PBO:0029318"}


id: PBO:0072295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 13","termid":"PBO:0072295"}


id: PBO:0089603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase S6K family Sck1","termid":"PBO:0089603"}


id: PBO:0082708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; Mic26p is a non-essential component of the complex; orthologous to human APOO and APOOL","termid":"PBO:0082708"}


id: PBO:0044597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 5","termid":"PBO:0044597"}


id: GO:1990045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sclerotium over time, from its formation to the mature structure. A sclerotium is a mycelial resting body, resistant to adverse environmental conditions.","definition_xrefs":["PMID:21148914","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sclerotium development","termid":"GO:1990045"}


id: GO:0003303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the process of heart jogging.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in heart jogging (obsolete GO:0003303)","synonyms":[{"name":"BMP signalling pathway involved in heart jogging","type":"exact"}],"termid":"GO:0003303"}


id: PBO:0058006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3929","termid":"PBO:0058006"}


id: PBO:0045654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 12","termid":"PBO:0045654"}


id: PBO:0111428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo5-like, F-box protein Pof6","termid":"PBO:0111428"}


id: PBO:0067416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 530, pseudogene","termid":"PBO:0067416"}


id: GO:0018556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dihydroxybenzenoid + O2 = H+ + distal extradiol ring cleavage. Substrates are 2,2',3-trihydroxybiphenyl (forms 2-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate) and 2,2',3-trihydroxydiphenylether (forms 2,3-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate).","definition_xrefs":["UM-BBD_enzymeID:e0032"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,2',3-trihydroxybiphenyl dioxygenase activity (obsolete GO:0018556)","termid":"GO:0018556"}


id: GO:0052694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: jasmonoyl-isoleucine + NADPH + H+ + O2 = 12-hydroxy-jasmonoyl-isoleucine + NADP+ + H2O.","definition_xrefs":["PMID:21576464","MetaCyc:RXN-12421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"jasmonoyl-isoleucine-12-hydroxylase activity","secondary_identifiers":["RHEA:54808"],"termid":"GO:0052694"}


id: PBO:0110340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C4A (Chido/Rodgers blood group)","termid":"PBO:0110340"}


id: GO:0070994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus indicating oxidative stress is received and converted into a molecular signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of oxidative stress","termid":"GO:0070994"}


id: PBO:0000810
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside mannosyltransferase","termid":"PBO:0000810"}


id: GO:0034601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + CoA + NAD(P)+ = succinyl-CoA + CO2 + NAD(P)H.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxoglutarate dehydrogenase [NAD(P)+] activity","termid":"GO:0034601"}


id: PBO:0062030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily S member 1 pseudogene","termid":"PBO:0062030"}


id: PBO:0070024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1321, pseudogene","termid":"PBO:0070024"}


id: PBO:0062059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 6 pseudogene","termid":"PBO:0062059"}


id: PBO:0048373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated regulator of MAPK1 subtype 1","termid":"PBO:0048373"}


id: GO:0019853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-ascorbic acid; L-ascorbic acid ionizes to give L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, which is required as a cofactor in the oxidation of prolyl residues to hydroxyprolyl, and other reactions.","definition_xrefs":["ISBN:0198547684","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ascorbic acid metabolic process","termid":"GO:0019852"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"L-ascorbic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-882"],"synonyms":[{"name":"L-ascorbic acid anabolism","type":"exact"},{"name":"L-ascorbic acid biosynthesis","type":"exact"},{"name":"L-ascorbic acid formation","type":"exact"},{"name":"L-ascorbic acid synthesis","type":"exact"},{"name":"ascorbate biosynthesis","type":"exact"},{"name":"ascorbate biosynthetic process","type":"exact"},{"name":"vitamin C biosynthesis","type":"exact"},{"name":"vitamin C biosynthetic process","type":"exact"}],"termid":"GO:0019853"}


id: PBO:0058427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4797","termid":"PBO:0058427"}


id: GO:0010411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xyloglucan, the cross-linking glycan composed of (1->4)-beta-D-glucan backbone substituted at regular intervals with beta-D-xylosyl-(1->6) residues, which is present in the primary cell wall of most higher plants.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemicellulose metabolic process","termid":"GO:0010410"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"xyloglucan metabolic process","synonyms":[{"name":"xyloglucan metabolism","type":"exact"}],"termid":"GO:0010411"}


id: GO:1904802
data:
  {"annotated_genes":["SJAG_00087"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110400],"is_not":false,"summary":null,"term":"GO:1904802"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a RITS complex.","definition_xrefs":["GOC:TermGenie","PMID:26443059","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00087":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"RITS complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RITS complex formation","type":"exact"}],"termid":"GO:1904802","terms_by_termid":{"GO:1904802":null}}


id: GO:0120289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of intramembrane cleaving aspartic-type endopeptidase activity.","definition_xrefs":["PMID:32616437","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of aspartic endopeptidase activity, intramembrane cleaving (obsolete GO:0120289)","termid":"GO:0120289"}


id: PBO:0004308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine--dolichyl-phosphateN-acetylglucosaminephosphotransferase","termid":"PBO:0004308"}


id: PBO:0064213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase B domain containing 2","termid":"PBO:0064213"}


id: GO:0005468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete small-molecule carrier or transporter (obsolete GO:0005468)","synonyms":[{"name":"small-molecule carrier or transporter","type":"exact"}],"termid":"GO:0005468"}


id: PBO:0059965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 10","termid":"PBO:0059965"}


id: GO:0015983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of solute translocation in which two solutes equilibrate across an osmotic barrier, and the translocation of one solute is coupled to the translocation of the other in the same direction.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete symport (obsolete GO:0015983)","synonyms":[{"name":"symport","type":"exact"}],"termid":"GO:0015983"}


id: GO:1903892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the ATF6-mediated unfolded protein response.","definition_xrefs":["PMID:22013210","GOC:TermGenie","GOC:bf","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900102"},{"relation_name":"is_a","term_name":"regulation of ATF6-mediated unfolded protein response","termid":"GO:1903891"},{"relation_name":"negatively_regulates","term_name":"ATF6-mediated unfolded protein response","termid":"GO:0036500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ATF6-mediated unfolded protein response","synonyms":[{"name":"down regulation of ATF6 branch of UPR","type":"exact"},{"name":"down regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"down regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"down regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"down regulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"down regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"down regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"down regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"down-regulation of ATF6 branch of UPR","type":"exact"},{"name":"down-regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"down-regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"down-regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"down-regulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"down-regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"down-regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"down-regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"downregulation of ATF6 branch of UPR","type":"exact"},{"name":"downregulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"downregulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"downregulation of ATF6-beta UPR branch","type":"narrow"},{"name":"downregulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"downregulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"downregulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"downregulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"inhibition of ATF6 branch of UPR","type":"narrow"},{"name":"inhibition of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"inhibition of ATF6-alpha UPR branch","type":"narrow"},{"name":"inhibition of ATF6-beta UPR branch","type":"narrow"},{"name":"inhibition of ATF6-mediated unfolded protein response","type":"narrow"},{"name":"inhibition of UPR signaling by ATF6 stress sensor","type":"narrow"},{"name":"inhibition of activating transcription factor 6 signaling in unfolded protein response","type":"narrow"},{"name":"inhibition of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"narrow"},{"name":"negative regulation of ATF6 branch of UPR","type":"exact"},{"name":"negative regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"negative regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"negative regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"negative regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"negative regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"negative regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:1903892"}


id: PR:O43010
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycylpeptide N-tetradecanoyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.11","synonyms":[{"name":"NMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-myr1","type":"exact"},{"name":"myristoyl-CoA:protein N-myristoyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peptide N-myristoyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43010"}


id: GO:1904012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to platinum.","definition_xrefs":["GOC:TermGenie","PMID:10089464","GO_REF:0000067"],"gene_count":0,"genotype_count":0,"name":"obsolete platinum binding (obsolete GO:1904012)","termid":"GO:1904012"}


id: GO:0062096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a kinetochore into its constituent components.","definition_xrefs":["PMID:27611693","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinetochore organization","termid":"GO:0051383"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kinetochore disassembly","termid":"GO:0062096"}


id: GO:0042758
data:
  {"annotated_genes":["SJAG_04570"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109861],"is_not":false,"summary":null,"term":"GO:0042758"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a long-chain fatty acid. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["PMID:20043225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"long-chain fatty acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"long-chain fatty acid breakdown","type":"exact"},{"name":"long-chain fatty acid catabolism","type":"exact"},{"name":"long-chain fatty acid degradation","type":"exact"}],"termid":"GO:0042758","terms_by_termid":{"GO:0042758":null}}


id: PBO:0051384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant 1","termid":"PBO:0051384"}


id: PBO:0043088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesterol induced regulator of metabolism RNA","termid":"PBO:0043088"}


id: GO:0002945
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin Kand cyclin-dependent kinase 13 (CDK13). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:22012619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin K-CDK13 complex","synonyms":[{"name":"CycK/Cdk13 complex","type":"related"}],"termid":"GO:0002945"}


id: PBO:0052186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 18","termid":"PBO:0052186"}


id: GO:0019887
data:
  {"annotated_genes":["SJAG_00457","SJAG_01213","SJAG_03695","SJAG_00142","SJAG_03931","SJAG_04502","SJAG_03591","SJAG_00973","SJAG_04509","SJAG_01020","SJAG_01605","SJAG_00613","SJAG_02232","SJAG_05030","SJAG_01245","SJAG_05978","SJAG_01401","SJAG_00439","SJAG_02332","SJAG_05017","SJAG_01821","SJAG_00424","SJAG_04614","SJAG_00100","SJAG_04200","SJAG_04666","SJAG_00333","SJAG_01210","SJAG_02605","SJAG_01411","SJAG_00236","SJAG_03618","SJAG_01118","SJAG_03699","SJAG_02785","SJAG_03340","SJAG_03936","SJAG_03453","SJAG_04020","SJAG_03525","SJAG_00318","SJAG_03371","SJAG_01000","SJAG_02026","SJAG_02057","SJAG_01274","SJAG_04140","SJAG_01716","SJAG_02404","SJAG_03090","SJAG_03802"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93863,93989,112240,114449],"is_not":false,"summary":null,"term":"GO:0019887"},{"annotations":[96544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[88239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019912"},{"annotations":[97726,101096,113158,108182,109071,104973,107011,107296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[104991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[84353,104456,102345,100431,87845,102440,102055,98963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016538"},{"annotations":[114966,106622,114967,107529,87412,113359,95187,95188,95294,108581,112418,105932,85338,114850,103236,105931,83974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030295"},{"annotations":[111408,103108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[85563,109072,84042,87243,85353,86968,101206,105365,96085,88527,113360,114436,106643,87291,87292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043539"},{"annotations":[104504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"}]},"cv_name":"molecular_function","definition":"Modulates the activity of a protein kinase, an enzyme which phosphorylates a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase regulator activity","termid":"GO:0019207"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00142":null,"SJAG_00236":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00424":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_00613":null,"SJAG_00973":null,"SJAG_01000":null,"SJAG_01020":null,"SJAG_01118":null,"SJAG_01210":null,"SJAG_01213":null,"SJAG_01245":null,"SJAG_01274":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01605":null,"SJAG_01716":null,"SJAG_01821":null,"SJAG_02026":null,"SJAG_02057":null,"SJAG_02232":null,"SJAG_02332":null,"SJAG_02404":null,"SJAG_02605":null,"SJAG_02785":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03802":null,"SJAG_03931":null,"SJAG_03936":null,"SJAG_04020":null,"SJAG_04140":null,"SJAG_04200":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_04666":null,"SJAG_05017":null,"SJAG_05030":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"protein kinase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019887","terms_by_termid":{"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0016538":null,"GO:0019887":null,"GO:0019912":null,"GO:0030291":null,"GO:0030295":null,"GO:0043539":null,"GO:0061575":null}}


id: GO:0046648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gamma-delta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"is_a","term_name":"positive regulation of gamma-delta T cell activation","termid":"GO:0046645"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell proliferation","termid":"GO:0046646"},{"relation_name":"positively_regulates","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gamma-delta T cell proliferation","synonyms":[{"name":"activation of gamma-delta T cell proliferation","type":"narrow"},{"name":"positive regulation of gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of gamma-delta T-cell proliferation","type":"exact"},{"name":"positive regulation of gamma-delta T-lymphocyte proliferation","type":"exact"},{"name":"stimulation of gamma-delta T cell proliferation","type":"narrow"},{"name":"up regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"up-regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"upregulation of gamma-delta T cell proliferation","type":"exact"}],"termid":"GO:0046648"}


id: GO:0006170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dAMP, deoxyadenosine monophosphate (2'-deoxyadenosine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009171"},{"relation_name":"is_a","term_name":"dAMP metabolic process","termid":"GO:0046053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dAMP biosynthetic process","synonyms":[{"name":"dAMP anabolism","type":"exact"},{"name":"dAMP biosynthesis","type":"exact"},{"name":"dAMP formation","type":"exact"},{"name":"dAMP synthesis","type":"exact"}],"termid":"GO:0006170"}


id: PBO:0029577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_threonine_phosphorylation_at_Thr-Pro_site","termid":"PBO:0029577"}


id: PBO:0061686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP153 antisense RNA 1","termid":"PBO:0061686"}


id: GO:1901811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-carotene.","definition_xrefs":["GOC:yaf","UniPathway:UPA00802","MetaCyc:PWY-5943","PMID:11387982","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"beta-carotene metabolic process","termid":"GO:1901810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-carotene catabolic process","synonyms":[{"name":"beta-carotene breakdown","type":"exact"},{"name":"beta-carotene catabolism","type":"exact"},{"name":"beta-carotene degradation","type":"exact"}],"termid":"GO:1901811"}


id: PBO:0081827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 750","termid":"PBO:0081827"}


id: PATO:0000871
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000871 aggressive (obsolete PATO:0000871)","termid":"PATO:0000871"}


id: PBO:0060451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine kinase","termid":"PBO:0060451"}


id: GO:0033336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the caudal fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin development","termid":"GO:0033338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudal fin development","termid":"GO:0033336"}


id: GO:0045736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity.","definition_xrefs":["GOC:go_curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclin-dependent protein serine/threonine kinase activity","termid":"GO:0000079"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle","termid":"GO:0045786"},{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"},{"relation_name":"is_a","term_name":"negative regulation of cyclin-dependent protein kinase activity","termid":"GO:1904030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cyclin-dependent protein serine/threonine kinase activity","termid":"GO:0045736"}


id: GO:0070040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine2503 in 23S rRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 2-methyladenosine2503 in 23S rRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:42916","GOC:imk","PMID:20184321","PMID:21415317","PMID:21368151","PMID:21527678","PMID:20007606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"rRNA (adenine(2503)-C2-)-methyltransferase activity","secondary_identifiers":["EC:2.1.1.192","MetaCyc:RXN-11586"],"synonyms":[{"name":"rRNA (adenine-C2-)-methyltransferase activity","type":"broad"}],"termid":"GO:0070040"}


id: PBO:0000487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr3 (predicted)","termid":"PBO:0000487"}


id: PBO:0005769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L17 (predicted)","termid":"PBO:0005769"}


id: PBO:0090144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitophagy receptor Atg43","termid":"PBO:0090144"}


id: FYPO:0005117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to is normal (i.e. indistinguishable from wild type) in extent, timing, start or termination site, etc. when the cell is subject to nitrogen starvation. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription","termid":"FYPO:0002882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"normal transcription during nitrogen starvation","synonyms":[{"name":"normal transcription during cellular response to nitrogen starvation","type":"exact"},{"name":"normal transcription during nitrogen depletion","type":"exact"},{"name":"normal transcription during nitrogen deprivation","type":"exact"},{"name":"normal transcription during nitrogen limitation","type":"exact"},{"name":"normal transcription in response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0005117"}


id: PBO:0109140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3110","termid":"PBO:0109140"}


id: PBO:0073559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHC adaptor protein 2","termid":"PBO:0073559"}


id: FYPO:0002400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed during mitotic interphase in which all detectable microtubules are present in a single bundle.","definition_xrefs":["PomBase:mlr","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"single microtubule bundle during mitotic interphase","synonyms":[{"name":"single MT bundle during mitotic interphase","type":"exact"},{"name":"single microtubule array during mitotic interphase","type":"exact"}],"termid":"FYPO:0002400"}


id: GO:1990651
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104392],"is_not":false,"summary":null,"term":"GO:1990651"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,2,4,5,6-pentakisphosphate + H2O = 1D-myo-inositol 1,2,4,6-tetrakisphosphate + phosphate.","definition_xrefs":["GOC:al","PMID:15316017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol pentakisphosphate phosphatase activity","termid":"GO:0052827"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"inositol-1,2,4,5,6-pentakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990651","terms_by_termid":{"GO:1990651":null}}


id: PBO:0031468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione_gamma-glutamylcysteinyltransferase_activity","termid":"PBO:0031468"}


id: PBO:0042434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 40","termid":"PBO:0042434"}


id: GO:0032388
data:
  {"annotated_genes":["SJAG_03453","SJAG_02592","SJAG_04597","SJAG_04464","SJAG_01805","SJAG_04312","SJAG_00906","SJAG_03048","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[104827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"},{"annotations":[89909,96542,107106,97951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[98490,90478,86959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of substances within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00906":null,"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intracellular transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of intracellular transport","type":"narrow"},{"name":"stimulation of intracellular transport","type":"narrow"},{"name":"up regulation of intracellular transport","type":"exact"},{"name":"up-regulation of intracellular transport","type":"exact"},{"name":"upregulation of intracellular transport","type":"exact"}],"termid":"GO:0032388","terms_by_termid":{"GO:0042307":null,"GO:0046827":null,"GO:0070863":null,"GO:1902854":null}}


id: PATO:0000662
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000662 volume_quantity (obsolete PATO:0000662)","termid":"PATO:0000662"}


id: PBO:0003864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor SpELL","termid":"PBO:0003864"}


id: PBO:0082760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SF3b subcomplex of the U2 snRNP; increases efficiency of first and second step pre-mRNA splicing; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern; facilitates passage through G1/S Start, but is not required for G2/M transition or exit from mitosis","termid":"PBO:0082760"}


id: SO:0001760
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene that arose from a means other than retrotransposition. A pseudogene created via genomic duplication of a functional protein-coding parent gene followed by accumulation of deleterious mutations.","definition_xrefs":["SO:ke","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogene","termid":"SO:0000336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_processed_pseudogene","synonyms":[{"name":"INSDC_feature:gene","type":"broad"},{"name":"INSDC_qualifier:unprocessed","type":"exact"},{"name":"non processed pseudogene","type":"related"},{"name":"unprocessed pseudogene","type":"exact"},{"name":"unprocessed_pseudogene","type":"exact"}],"termid":"SO:0001760"}


id: PBO:0043939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB regulated transcription coactivator 3","termid":"PBO:0043939"}


id: PBO:0041921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 4","termid":"PBO:0041921"}


id: PBO:0079360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 3f pseudogene","termid":"PBO:0079360"}


id: PBO:0039447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and kinase domain containing 1","termid":"PBO:0039447"}


id: GO:0046702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to a galactoside acceptor molecule, usually an N-glycan, to form an alpha(1,6)-fucosylated galactoside.","definition_xrefs":["PMID:12413479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-(1->6)-fucosyltransferase activity","termid":"GO:0046921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"galactoside 6-L-fucosyltransferase activity","termid":"GO:0046702"}


id: PBO:0059895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 18","termid":"PBO:0059895"}


id: PBO:0086794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YAL037W has a paralog, YOR342C, that arose from the whole genome duplication","termid":"PBO:0086794"}


id: GO:1901680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of sulfur-containing amino acid from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfur-containing amino acid secondary active transmembrane transporter activity (obsolete GO:1901680)","termid":"GO:1901680"}


id: RO:0002566
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between materal entities a and b if the activity of a is causally upstream of the activity of b, or causally upstream of a an activity that modifies b","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_material_entities","termid":"RO:0002506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_influences","termid":"RO:0002566"}


id: FYPO:0003978
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and has a nuclear envelope that is broken into multiple small fragments and one or more clusters of nuclear pores present in the cytoplasm during mitotic telophase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"nuclear pore aggregation in cytoplasm","termid":"FYPO:0003974"},{"relation_name":"is_a","term_name":"abnormal nuclear pore localization","termid":"FYPO:0003973"},{"relation_name":"is_a","term_name":"inviable vegetative cell with fragmented nuclear envelope during mitotic telophase","termid":"FYPO:0003976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002403"],"is_obsolete":false,"name":"inviable vegetative cell with fragmented nuclear envelope and nuclear pore aggregation in cytoplasm during mitotic telophase","synonyms":[{"name":"inviable cell with fragmented nuclear envelope and nuclear pore aggregation in cytoplasm during mitotic telophase during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with fragmented nuclear envelope and NPC aggregation in cytoplasm during mitotic telophase","type":"exact"},{"name":"inviable vegetative cell with fragmented nuclear envelope and nuclear pore aggregation in cytoplasm during telophase of mitotic cell cycle","type":"related"},{"name":"inviable vegetative cell with fragmented nuclear envelope and nuclear pore complex aggregation in cytoplasm during mitotic telophase","type":"exact"},{"name":"lethal; vegetative cell with fragmented nuclear envelope and nuclear pore aggregation in cytoplasm during mitotic telophase","type":"exact"}],"termid":"FYPO:0003978"}


id: PBO:0017858
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of dextrin to glucose is 7.6 (uM min-1 ml-2)","termid":"PBO:0017858"}


id: PBO:0032743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B epsilon subunit","termid":"PBO:0032743"}


id: GO:0100040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates invasive growth in response to glucose limitation.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invasive growth in response to glucose limitation by transcription from RNA polymerase II promoter (obsolete GO:0100040)","termid":"GO:0100040"}


id: PBO:0080777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 8","termid":"PBO:0080777"}


id: GO:0010303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic linkages in alpha- and beta-limit dextrins of amylopectin and glycogen, and in amylopectin and pullulan.","definition_xrefs":["EC:3.2.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"limit dextrinase activity","secondary_identifiers":["MetaCyc:3.2.1.142-RXN"],"synonyms":[{"name":"R-enzyme","type":"related"},{"name":"amylopectin-1,6-glucosidase activity","type":"related"},{"name":"dextrin alpha-1,6-glucanohydrolase activity","type":"related"}],"termid":"GO:0010303"}


id: PBO:0090568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA endoribonuclease involved in mRNP quality control Swt1","termid":"PBO:0090568"}


id: GO:0044490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["PMID:21781281","GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of voltage-gated sodium channel activity in another organism","termid":"GO:0044488"},{"relation_name":"is_a","term_name":"positive regulation of molecular function in another organism","termid":"GO:0044491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of voltage-gated sodium channel activity in another organism","synonyms":[{"name":"positive regulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044490"}


id: PBO:0005683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ssp1","termid":"PBO:0005683"}


id: GO:0034479
data:
  {"annotated_genes":["SJAG_02161"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93880],"is_not":false,"summary":null,"term":"GO:0034479"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidylglycerol + H2O = 1,2-diacylglycerol + glycerol 3-phosphate.","definition_xrefs":["PMID:18434318","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02161":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"phosphatidylglycerol phospholipase C activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034479","terms_by_termid":{"GO:0034479":null}}


id: GO:0048494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, located in the chromatophore, containing either both large and small subunits or just small subunits which carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribulose bisphosphate carboxylase complex","termid":"GO:0048492"},{"relation_name":"part_of","term_name":"plasma membrane-derived chromatophore","termid":"GO:0042716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"chromatophore ribulose bisphosphate carboxylase complex","synonyms":[{"name":"RubisCO complex","type":"broad"}],"termid":"GO:0048494"}


id: PBO:0085456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potassium transporter that mediates K+ influx; activates high-affinity Ca2+ influx system (HACS) during mating pheromone response; expression up-regulated in response to alpha factor; regulated by Ste12p during mating; localized to sites of polarized growth; member of a fungal-specific gene family; PRM6 has a paralog, KCH1, that arose from the whole genome duplication","termid":"PBO:0085456"}


id: PBO:0071604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 21","termid":"PBO:0071604"}


id: PBO:0082880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex; role in anaphase progression; Rtt101p-Mms22p ligase associates with replisome complex during S phase via Ctf4p; required for recovery after DSB repair; implicated in Mms22-dependent DNA repair; involved with Mms1p in nonfunctional rRNA decay; modified by the ubiquitin-like protein, Rub1p","termid":"PBO:0082880"}


id: PR:Q9Y7K5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2A9.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7K5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C2A9.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.03","synonyms":[{"name":"Spom972h-SPBC2A9.03","type":"exact"}],"termid":"PR:Q9Y7K5"}


id: PBO:0073407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 10","termid":"PBO:0073407"}


id: FYPO:0003212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that is kinked, i.e. has multiple angles along its length.","definition_xrefs":["PomBase:mah","PMID:22891259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000032","FYPO:0000002"],"is_obsolete":false,"name":"kinked septum","synonyms":[{"name":"kinked septum during mitotic cell cycle","type":"related"},{"name":"kinked septum during vegetative growth","type":"exact"},{"name":"twisted septum","type":"related"}],"termid":"FYPO:0003212"}


id: PBO:0005746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfonate dioxygenase (predicted)","termid":"PBO:0005746"}


id: PBO:0034343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_with","termid":"PBO:0034343"}


id: PBO:0067658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 835, pseudogene","termid":"PBO:0067658"}


id: GO:0102848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-18:2-digalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-18:2-digalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-18:2-digalactosyldiacylglycerol desaturase activity (obsolete GO:0102848)","termid":"GO:0102848"}


id: PBO:0082572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin deacetylase; together with Cda2p involved in the biosynthesis ascospore wall component, chitosan; required for proper rigidity of the ascospore wall","termid":"PBO:0082572"}


id: GO:0000257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a nitrile + H2O = a carboxylate + NH3. Acts on a wide range of aromatic nitriles including (indole-3-yl)-acetonitrile and some aliphatic nitriles, and on the corresponding acid amides.","definition_xrefs":["EC:3.5.5.1","GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles","termid":"GO:0016815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitrilase activity","secondary_identifiers":["KEGG_REACTION:R00540","RHEA:21724","UM-BBD_reactionID:r0377","UM-BBD_reactionID:r0701","MetaCyc:3.5.5.1-RXN"],"synonyms":[{"name":"acetonitrilase activity","type":"related"},{"name":"benzonitrilase activity","type":"related"},{"name":"nitrile aminohydrolase activity","type":"related"}],"termid":"GO:0000257"}


id: GO:1902537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A pinocytosis which involves another organism.","definition_xrefs":["GOC:jl","GOC:TermGenie","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism pinocytosis (obsolete GO:1902537)","termid":"GO:1902537"}


id: PBO:0030101
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_histidine_level","termid":"PBO:0030101"}


id: PBO:0088862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA N-glycosylase activity","termid":"PBO:0088862"}


id: PBO:0051750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inturned planar cell polarity protein","termid":"PBO:0051750"}


id: PBO:0040985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 family apoptosis regulator BOK","termid":"PBO:0040985"}


id: PBO:0005813
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe CAspase 1","termid":"PBO:0005813"}


id: PBO:0075164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 20","termid":"PBO:0075164"}


id: PBO:0080102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP14A small subunit processome component","termid":"PBO:0080102"}


id: PR:O94597
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.07 gene.","definition_xrefs":["UniProtKB:O94597","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.07","synonyms":[{"name":"Spom972h-SPCC622.07","type":"exact"}],"termid":"PR:O94597"}


id: GO:0071698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the olfactory placode over time from its initial formation until its mature state. The olfactory placode is a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode development","termid":"GO:0071696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory placode development","termid":"GO:0071698"}


id: GO:0040033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A post-transcriptional gene silencing pathway mediated by the action of small regulatory non-coding RNAs (sRNAs). sRNAs are 20-500 nucleotides in length and found in bacteria.","definition_xrefs":["PMID:33963446","PMID:12460531","PMID:2468565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"sRNA-mediated post-transcriptional gene silencing","synonyms":[{"name":"RNA-mediated gene silencing by inhibition of translation","type":"broad"},{"name":"downregulation of mRNA translation, ncRNA-mediated","type":"broad"},{"name":"inhibition of mRNA translation, ncRNA-mediated","type":"broad"},{"name":"sRNA-mediated gene silencing","type":"broad"},{"name":"small RNA-mediated gene silencing","type":"exact"}],"termid":"GO:0040033"}


id: PBO:0109811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane dislocase Msp1/Yta4","termid":"PBO:0109811"}


id: PBO:0086444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mannose-ethanolamine phosphate phosphodiesterase; involved in GPI-anchor remodeling prior to the attachment of cell wall proteins to beta 1,3-glucan, removing ethanolamine phosphate from the first mannose of GPI anchors; mutants display elevated Ca2+-dependent signaling resulting in secondary actin polarization and Golgi inheritance defects; enzyme is Mn2+-dependent; mutants have cell division cycle defect and fragile cell walls","termid":"PBO:0086444"}


id: PBO:0039258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 7 family member A1","termid":"PBO:0039258"}


id: MOD:01925
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to (2S,5R)-5-hydroxylysine.","definition_xrefs":["ChEBI:18040","PubMed:13375629","PubMed:15504407","PubMed:16101297","PubMed:2857489","RESID:AA0028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-hydroxy-L-lysine","termid":"MOD:00037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,5R)-5-hydroxylysine","synonyms":[{"name":"(2S,5R)-2,6-diamino-5-hydroxyhexanoic acid","type":"exact"},{"name":"(2S,5R)-5-hydroxylysine","type":"exact"},{"name":"2,6-bisazanyl-5-hydroxyhexanoic acid","type":"exact"},{"name":"2,6-diamino-2,3,4,6-tetradeoxyhexonic acid","type":"exact"},{"name":"5-hydroxylated L-lysine","type":"exact"},{"name":"5HyLys","type":"exact"},{"name":"L-erythro-delta-hydroxylysine","type":"exact"},{"name":"MOD_RES (2S,5R)-5-hydroxylysine","type":"exact"},{"name":"alpha,epsilon-diamino-delta-hydroxycaproic acid","type":"exact"}],"termid":"MOD:01925"}


id: PBO:0082509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of protein phosphatase PP4 complex; Pph3p and Psy2p form active complex, Psy4p may provide substrate specificity; regulates recovery from the DNA damage checkpoint, the gene conversion- and single-strand annealing-mediated pathways of meiotic double-strand break repair and efficient Non-Homologous End-Joining (NHEJ) pathway; involved in activation of Gln3p to alleviate nitrogen catabolite repression; Pph3p and Psy2p localize to foci on meiotic chromosomes","termid":"PBO:0082509"}


id: PBO:0064005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 39","termid":"PBO:0064005"}


id: PBO:0055633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3072","termid":"PBO:0055633"}


id: GO:0098620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Ser-tRNA(Sec) + ATP = Sep-tRNA(Sec) + ADP.","definition_xrefs":["PMID:15317934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0140101","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"seryl-selenocysteinyl-tRNA kinase activity","secondary_identifiers":["Reactome:R-HSA-2408507"],"termid":"GO:0098620"}


id: PBO:0039295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG10 alpha-1,2-glucosyltransferase","termid":"PBO:0039295"}


id: PBO:0054368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1762","termid":"PBO:0054368"}


id: PBO:0068787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 24, pseudogene","termid":"PBO:0068787"}


id: GO:0061333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the renal tubule is generated by specification of cell fate, through the maintenance of cell polarity, regulated cell proliferation and morphogenetic cell rearrangements, shape changes and growth. A renal tubule is a tube that filters, re-absorbs and secretes substances to rid an organism of waste and to play a role in fluid homeostasis.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"renal tubule development","termid":"GO:0061326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal tubule morphogenesis","termid":"GO:0061333"}


id: PBO:0091407
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly at damage sites is facilitated by Swi5 independently of Rad57","termid":"PBO:0091407"}


id: PBO:0081468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 341","termid":"PBO:0081468"}


id: PBO:0075913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 5","termid":"PBO:0075913"}


id: PBO:0080090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 51","termid":"PBO:0080090"}


id: PBO:0082277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anthranilate phosphoribosyl transferase; transferase of the tryptophan biosynthetic pathway; catalyzes the phosphoribosylation of anthranilate; subject to the general control system of amino acid biosynthesis","termid":"PBO:0082277"}


id: GO:0030513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of BMP signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of BMP signaling pathway","termid":"GO:0030510"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090100"},{"relation_name":"positively_regulates","term_name":"BMP signaling pathway","termid":"GO:0030509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of BMP signaling pathway","secondary_identifiers":["GO:0090098"],"synonyms":[{"name":"activation of BMP signaling pathway","type":"narrow"},{"name":"positive regulation of BMP receptor signaling pathway","type":"related"},{"name":"positive regulation of BMP signalling pathway","type":"exact"},{"name":"positive regulation of bone morphogenetic protein signaling pathway","type":"exact"},{"name":"positive regulation of bone morphogenetic protein signalling pathway","type":"exact"},{"name":"positive regulation of decapentaplegic receptor signaling pathway","type":"narrow"},{"name":"positive regulation of decapentaplegic receptor signalling pathway","type":"narrow"},{"name":"positive regulation of decapentaplegic signaling pathway","type":"narrow"},{"name":"stimulation of BMP signaling pathway","type":"narrow"},{"name":"up regulation of BMP signaling pathway","type":"exact"},{"name":"up-regulation of BMP signaling pathway","type":"exact"},{"name":"upregulation of BMP signaling pathway","type":"exact"}],"termid":"GO:0030513"}


id: PBO:0071583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL36A-HNRNPH2 readthrough","termid":"PBO:0071583"}


id: PBO:0063404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin like 3","termid":"PBO:0063404"}


