# terms

id: PBO:0084680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial beta-keto-acyl synthase; possible role in fatty acid synthesis; required for mitochondrial respiration; human homolog OXSM can complement yeast cem1 null mutant","termid":"PBO:0084680"}


id: PR:P78954
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif45 gene.","definition_xrefs":["UniProtKB:P78954","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.15","synonyms":[{"name":"Spom972h-tif45","type":"exact"},{"name":"eIF-4E-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF-4F 25 kDa subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF4E-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mRNA cap-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78954"}


id: PBO:0073001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel beta subunit 2","termid":"PBO:0073001"}


id: PR:O14027
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snz1 gene.","definition_xrefs":["UniProtKB:O14027","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal 5'-phosphate synthase subunit PDX1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.04","synonyms":[{"name":"PLP synthase subunit PDX1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snz1","type":"exact"}],"termid":"PR:O14027"}


id: PBO:0016911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug94","termid":"PBO:0016911"}


id: PBO:0045465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D2","termid":"PBO:0045465"}


id: PBO:0088745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc chaperone Zng1","termid":"PBO:0088745"}


id: PBO:0072341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 27","termid":"PBO:0072341"}


id: GO:0048053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the R1 and R6 pair of photoreceptors in the eye over time, from their formation to the mature structures. R1 and R6 are paired photoreceptors that contribute to the outer rhabdomeres. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor development","termid":"GO:0042051"},{"relation_name":"part_of","term_name":"R1/R6 cell differentiation","termid":"GO:0048052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R1/R6 development","termid":"GO:0048053"}


id: GO:0106277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bilirubin IXalpha + NADP+ = biliverdin IXalpha + NADPH + H+.","definition_xrefs":["RHEA:15793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliverdin reductase [NAD(P)+] activity","termid":"GO:0004074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"biliverdin reductase (NADP+) activity","secondary_identifiers":["https://github.com/geneontology/go-ontology/issues/28070"],"termid":"GO:0106277"}


id: PR:Q10498
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hgh1 gene.","definition_xrefs":["UniProtKB:Q10498","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein HGH1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.12c","synonyms":[{"name":"Spom972h-hgh1","type":"exact"}],"termid":"PR:Q10498"}


id: PBO:0068930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 173, pseudogene","termid":"PBO:0068930"}


id: PR:Q10415
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial intermediate peptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00249","PANTHER:PTHR11804:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.10c","secondary_identifiers":["UniProtKB:Q10415"],"synonyms":[{"name":"MIP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MIPEP","type":"exact"},{"name":"octapeptidyl aminopeptidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10415"}


id: PR:Q9US45
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of RNA polymerase II transcription subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13104:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.15c","secondary_identifiers":["UniProtKB:Q9US45"],"synonyms":[{"name":"RNA polymerase II mediator complex protein pmc5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC1002.15c","type":"related"},{"name":"Spom972h-MED6","type":"exact"},{"name":"mediator complex subunit 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pmc5","type":"related"}],"termid":"PR:Q9US45"}


id: GO:0046952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Ketone bodies can be used as an energy source as an alternative to glucose. Utilization of ketone bodies in peripheral tissues involves conversion of acetoacetate to acetoacetyl-CoA, which is then converted to two molecules of acetyl-CoA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"cellular ketone body metabolic process","termid":"GO:0046950"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"},{"relation_name":"is_a","term_name":"ketone body metabolic process","termid":"GO:1902224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0006091","GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"ketone body catabolic process","secondary_identifiers":["MetaCyc:PWY66-368"],"synonyms":[{"name":"ketolysis","type":"exact"},{"name":"ketone body breakdown","type":"exact"},{"name":"ketone body catabolism","type":"exact"},{"name":"ketone body degradation","type":"exact"},{"name":"utilization of ketone bodies","type":"exact"}],"termid":"GO:0046952"}


id: GO:0099534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The directed change of presynaptic cytosolic free calcium ion concentration in the cytosol via the reversible binding of calcium ions to calcium-binding proteins in the cytosol thereby modulating the spatial and temporal dynamics of changes in presynaptic cytosolic calcium concentrations.","definition_xrefs":["PMID:24442513","PMID:26190970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion binding involved in regulation of cytosolic calcium ion concentration","termid":"GO:0099510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0005488","GO:0046872","GO:0003674"],"is_obsolete":false,"name":"calcium ion binding involved in regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium ion binding involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"presynaptic calcium ion buffering","type":"exact"},{"name":"regulation of presynaptic cytosolic calcium ion concentration by calcium ion buffering","type":"exact"}],"termid":"GO:0099534"}


id: PBO:0045599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 10 (pseudogene)","termid":"PBO:0045599"}


id: PBO:0064187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XIIA pseudogene 1","termid":"PBO:0064187"}


id: PBO:0071324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 8","termid":"PBO:0071324"}


id: PBO:0086221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with the Sit4p protein phosphatase; required for Sit4p function; member of a family of similar proteins including Sap4p, Sap155p, and Sap185p; SAP190 has a paralog, SAP185, that arose from the whole genome duplication","termid":"PBO:0086221"}


id: GO:0031389
data:
  {"annotated_genes":["SJAG_00729","SJAG_02182","SJAG_02563","SJAG_00272","SJAG_01010"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85241,85695,90064,91372,108371],"is_not":false,"summary":null,"term":"GO:0031389"}]},"cv_name":"cellular_component","definition":"A pentameric protein complex related to replication factor C, which loads a trimeric complex of checkpoint proteins (known as the checkpoint clamp or 9-1-1 complex) onto DNA at damage sites; functions in DNA damage cell cycle checkpoints. In Schizosaccharomyces pombe the subunits are known as Rad17, Rfc2, Rfc3, Rfc4, and Rfc5, while in Saccharomyces cerevisiae the subunits are known as Rad24p, Rfc2p, Rfc3p, Rfc4p, and Rfc5p.","definition_xrefs":["PMID:14614842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_02563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"Rad17 RFC-like complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RFC (Rad17)","type":"exact"},{"name":"Rad17-RFC","type":"exact"},{"name":"Rad17-RLC","type":"exact"},{"name":"Rad24p RFC-like complex","type":"exact"}],"termid":"GO:0031389","terms_by_termid":{"GO:0031389":null}}


id: PBO:0026640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_during_cellular_response_to_UV","termid":"PBO:0026640"}


id: PBO:0087552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNase MRP, nuclear RNase P and telomerase; forms a soluble heterodimer with Pop6p that binds P3 domain of RNase MRP and RNase P RNAs; RNase MRP cleaves pre-rRNA, nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs, while telomerase replenishes telomeric DNA","termid":"PBO:0087552"}


id: GO:0033319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-D-xylose, uridinediphosphoxylose, a substance composed of xylose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UDP-D-xylose metabolic process","synonyms":[{"name":"UDP-D-xylose metabolism","type":"exact"}],"termid":"GO:0033319"}


id: PBO:0052719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 11","termid":"PBO:0052719"}


id: FYPO:0004843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has two nuclei and more than one septum, and the septa are grouped together between two compartments, one contains both nuclei.","definition_xrefs":["PMID:25203555","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000032"],"is_obsolete":false,"name":"multiseptate vegetative cell with binucleate and anucleate compartments","synonyms":[{"name":"multiseptate cell with binucleate and anucleate compartments during vegetative growth","type":"exact"},{"name":"multiseptate vegetative cell with binucleate and anucleate compartments during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004843"}


id: GO:0070951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a gram-negative bacterium, the directed killing of a gram-negative bacterium by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"},{"relation_name":"regulates","term_name":"neutrophil-mediated killing of gram-negative bacterium","termid":"GO:0070945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated killing of gram-negative bacterium","termid":"GO:0070951"}


id: PATO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a point.","definition_xrefs":["PATOC:http://www.merriam-webster.com/dictionary/pointed"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharp","termid":"PATO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pointed","termid":"PATO:0002258"}


id: PBO:0067832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 134","termid":"PBO:0067832"}


id: GO:0002362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a CD4-positive, CD25-positive, alpha-beta regulatory T cell.","definition_xrefs":["PMID:15207821","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell lineage commitment","termid":"GO:0043373"},{"relation_name":"part_of","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment","synonyms":[{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte lineage commitment","type":"exact"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-cell lineage commitment","type":"exact"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002362"}


id: PBO:0009641
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.-.-","termid":"PBO:0009641"}


id: PBO:0071369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 28","termid":"PBO:0071369"}


id: PBO:0078955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transformation/transcription domain associated protein","termid":"PBO:0078955"}


id: PBO:0077225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 2","termid":"PBO:0077225"}


id: PBO:0047840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box S1","termid":"PBO:0047840"}


id: PBO:0075193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 5","termid":"PBO:0075193"}


id: GO:0007547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The events determining the germ-line sexual phenotype after the initial transmission of that phenotype to germ-line-specific information pathways.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"processes downstream of sex determination signal","termid":"GO:0007545"},{"relation_name":"part_of","term_name":"germ-line sex determination","termid":"GO:0018992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line processes downstream of sex determination signal","termid":"GO:0007547"}


id: GO:0046906
data:
  {"annotated_genes":["SJAG_02646","SJAG_05027","SJAG_04217","SJAG_03750","SJAG_02794","SJAG_03929","SJAG_03249","SJAG_02744","SJAG_MIT04","SJAG_04823","SJAG_02982","SJAG_02398"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112205,83908,111325,114355,115090,103944,84610,104058,112811,87595,90743,109302,88328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0020037"}]},"cv_name":"molecular_function","definition":"Binding to a tetrapyrrole, a compound containing four pyrrole nuclei variously substituted and linked to each other through carbons at the alpha position.","definition_xrefs":["GOC:curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":12,"genes_by_uniquename":{"SJAG_02398":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_02794":null,"SJAG_02982":null,"SJAG_03249":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04217":null,"SJAG_04823":null,"SJAG_05027":null,"SJAG_MIT04":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"tetrapyrrole binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"porphyrin binding","type":"narrow"}],"termid":"GO:0046906","terms_by_termid":{"GO:0020037":null}}


id: PBO:0005278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Spc7","termid":"PBO:0005278"}


id: GO:1901242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + doxorubicin(in) = ADP + phosphate + doxorubicin(out).","definition_xrefs":["PMID:15090538","GOC:TermGenie","PMID:12057006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type doxorubicin transporter activity","secondary_identifiers":["TC:3.A.1.105.1"],"synonyms":[{"name":"ATPase-coupled doxorubicin transmembrane transporter activity","type":"related"},{"name":"doxorubicin transmembrane-transporting ATPase activity","type":"related"}],"termid":"GO:1901242"}


id: GO:0015438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + teichoic acid(in) = ADP + phosphate + teichoic acid(out).","definition_xrefs":["PMID:7565096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type teichoic acid transporter activity","secondary_identifiers":["GO:0015162","MetaCyc:3.6.3.40-RXN","EC:7.5.2.4"],"synonyms":[{"name":"ABC-type teichoic-acid transporter","type":"exact"},{"name":"ATP-dependent teichoic acid transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled teichoic acid transmembrane transporter activity","type":"related"},{"name":"teichoic acid transmembrane transporter activity","type":"broad"},{"name":"teichoic-acid ABC transporter","type":"exact"},{"name":"teichoic-acid-transporting ATPase activity","type":"related"}],"termid":"GO:0015438"}


id: PBO:0108924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRNT1 pseudogene 2","termid":"PBO:0108924"}


id: PR:Q9P7F7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 4b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar-sorting protein snf7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.07c","secondary_identifiers":["UniProtKB:Q9P7F7"],"synonyms":[{"name":"SPAC1142.07c","type":"related"},{"name":"Spom972h-CHMP4B","type":"exact"},{"name":"vacuolar protein-sorting-associated protein 32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vps32","type":"related"}],"termid":"PR:Q9P7F7"}


id: PBO:0070175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 89 pseudogene","termid":"PBO:0070175"}


id: PBO:0072709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 3","termid":"PBO:0072709"}


id: PBO:0068429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, ribosomal 45S cluster 4","termid":"PBO:0068429"}


id: GO:0099058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic endocytic zone membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic endocytic zone membrane (obsolete GO:0099058)","termid":"GO:0099058"}


id: GO:0001896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed cell death process observed in bacteria and filamentous fungi and leading to spontaneous death by lysis. Examples are lysis of the mother cell during sporulation of Bacillus subtilis and self-degradation of fungal cells in Aspergillus nidulans. Autolysis is also involved in bacterial biofilm formation.","definition_xrefs":["PMID:19286987","PMID:26811896","GOC:mtg_apoptosis","PMID:10974124","GOC:add","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autolysis","secondary_identifiers":["Wikipedia:Autolysis"],"termid":"GO:0001896"}


id: FYPO:0007594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitophagy","termid":"FYPO:0000499"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitophagy during nitrogen starvation","synonyms":[{"name":"abolished autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"abolished autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"abolished autophagy of mitochondrion during nitrogen starvation","type":"exact"},{"name":"autophagy of mitochondrion abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007594"}


id: FYPO:0002679
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115394,115398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_04551"],"single_locus_genotype_uniquenames":["Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pck2delta"],"synonyms":[{"name":"reduced protein phosphorylation","type":"exact"}],"termid":"FYPO:0002679","terms_by_termid":{"FYPO:0001838":null}}


id: PBO:0069221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 476, pseudogene","termid":"PBO:0069221"}


id: PBO:0079680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3A pseudogene 2","termid":"PBO:0079680"}


id: PBO:0029091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_cytoplasmic_microtubules","termid":"PBO:0029091"}


id: GO:0036149
data:
  {"annotated_genes":["SJAG_03935"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106625],"is_not":false,"summary":null,"term":"GO:0036149"}]},"cv_name":"biological_process","definition":"Remodeling the acyl chains of phosphatidylinositol, through sequential deacylation and re-acylation reactions, to generate phosphatidylinositol containing different types of fatty acid acyl chains.","definition_xrefs":["GOC:mw","PMID:18094042","PMID:18772128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03935":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylinositol acyl-chain remodeling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylinositol acyl-chain remodelling","type":"exact"}],"termid":"GO:0036149","terms_by_termid":{"GO:0036149":null}}


id: PBO:0070945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a","termid":"PBO:0070945"}


id: PBO:0057456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 575","termid":"PBO:0057456"}


id: PBO:0061762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-5' oligoadenylate synthetase like 2, pseudogene","termid":"PBO:0061762"}


id: PBO:0078800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 18-1","termid":"PBO:0078800"}


id: PBO:0051700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-4-phosphatase type II B","termid":"PBO:0051700"}


id: PBO:0066092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 4","termid":"PBO:0066092"}


id: PBO:0002636
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schneckenbecken dysplasia","termid":"PBO:0002636"}


id: GO:0018658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicylate + NADH + H+ + O2 = catechol + NAD+ + H2O + CO2.","definition_xrefs":["EC:1.14.13.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"salicylate 1-monooxygenase activity","secondary_identifiers":["MetaCyc:SALICYLATE-1-MONOOXYGENASE-RXN","UM-BBD_enzymeID:e0149","RHEA:11004"],"synonyms":[{"name":"salicylate 1-hydroxylase activity","type":"related"},{"name":"salicylate hydroxylase (decarboxylating)","type":"related"},{"name":"salicylate hydroxylase activity","type":"exact"},{"name":"salicylate monooxygenase activity","type":"related"},{"name":"salicylate,NADH:oxygen oxidoreductase (1-hydroxylating, decarboxylating)","type":"related"},{"name":"salicylic hydroxylase activity","type":"related"}],"termid":"GO:0018658"}


id: RO:0002490
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence overlaps y if and only if either (a) the start of x is part of y or (b) the end of x is part of y. Formally: x existence starts and ends during y iff (α(x) >= α(y) & α(x) <= ω(y)) OR (ω(x) <= ω(y) & ω(x) >= α(y))","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_structure_and_stage","termid":"RO:0002487"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_overlaps","termid":"RO:0002490"}


id: PBO:0042668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 2","termid":"PBO:0042668"}


id: PBO:0077141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 1 pseudogene 1","termid":"PBO:0077141"}


id: PATO:0000255
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000255 taste_acuity (obsolete PATO:0000255)","termid":"PATO:0000255"}


id: PBO:0056860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIAT neighbor","termid":"PBO:0056860"}


id: PATO:0001198
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001198 unmodified direction (obsolete PATO:0001198)","termid":"PATO:0001198"}


id: PBO:0083392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF ATS1/YAL020C","termid":"PBO:0083392"}


id: GO:0050059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + lombricine = ADP + N-phospholombricine.","definition_xrefs":["MetaCyc:LOMBRICINE-KINASE-RXN","EC:2.7.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"lombricine kinase activity","secondary_identifiers":["RHEA:23292"],"synonyms":[{"name":"ATP:lombricine N-phosphotransferase activity","type":"related"}],"termid":"GO:0050059"}


id: GO:0046144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving D-alanine and related amino acids.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete D-alanine family amino acid metabolic process (obsolete GO:0046144)","synonyms":[{"name":"D-alanine family amino acid metabolism","type":"exact"}],"termid":"GO:0046144"}


id: PBO:0071772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2 pseudogene 5","termid":"PBO:0071772"}


id: PBO:0087559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of signal peptidase complex; complex catalyzes cleavage of N-terminal signal sequences of proteins targeted to the secretory pathway; homologous to mammalian SPC22/23; other members of the complex are Spc1p, Spc2p, and Sec11p","termid":"PBO:0087559"}


id: PBO:0028162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ATP_binding","termid":"PBO:0028162"}


id: FYPO:0005565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of microtubule bundles is abnormal when the cell undergoes transition from G0 phase to G1.","definition_xrefs":["PomBase:mah","PMID:26124291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule bundle during G0 to G1 transition","synonyms":[{"name":"abnormal MT bundle during G0 to G1 transition","type":"exact"},{"name":"abnormal microtubule array during G0 to G1 transition","type":"related"},{"name":"abnormal microtubule bundle during cell cycle re-entry","type":"exact"},{"name":"abnormal microtubule bundle during cell quiescence to G1 transition","type":"exact"},{"name":"abnormal microtubule bundle during exit from cell quiescence","type":"exact"},{"name":"abnormal microtubule bundle during quiescence to G1 transition","type":"exact"},{"name":"abnormal microtubule bundle during recovery from quiescence","type":"exact"},{"name":"abnormal microtubule bundle physical object quality during G0 to G1 transition","type":"exact"}],"termid":"FYPO:0005565"}


id: GO:0015634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of lipopolysaccharide from the inside of the cell to the outside of the cell across a membrane. A lipopolysaccharide is any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete lipopolysaccharide exporter activity (obsolete GO:0015634)","synonyms":[{"name":"LPS exporter activity","type":"exact"}],"termid":"GO:0015634"}


id: PBO:0063017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 5","termid":"PBO:0063017"}


id: PBO:0049580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.4 histone, cluster member","termid":"PBO:0049580"}


id: PR:O43070
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nbs1 gene.","definition_xrefs":["UniProtKB:O43070","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair and telomere maintenance protein nbs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.09c","synonyms":[{"name":"Spom972h-nbs1","type":"exact"}],"termid":"PR:O43070"}


id: GO:0036010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an endosome.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to endosome","synonyms":[{"name":"protein localisation in endosome","type":"exact"},{"name":"protein localization in endosome","type":"exact"}],"termid":"GO:0036010"}


id: GO:1904699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of acinar cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:9788538","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of acinar cell proliferation","termid":"GO:1904697"},{"relation_name":"positively_regulates","term_name":"acinar cell proliferation","termid":"GO:1990863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acinar cell proliferation","synonyms":[{"name":"activation of acinar cell proliferation","type":"narrow"},{"name":"activation of acinic cell proliferation","type":"narrow"},{"name":"activation of acinous cell proliferation","type":"narrow"},{"name":"positive regulation of acinic cell proliferation","type":"exact"},{"name":"positive regulation of acinous cell proliferation","type":"exact"},{"name":"up regulation of acinar cell proliferation","type":"exact"},{"name":"up regulation of acinic cell proliferation","type":"exact"},{"name":"up regulation of acinous cell proliferation","type":"exact"},{"name":"up-regulation of acinar cell proliferation","type":"exact"},{"name":"up-regulation of acinic cell proliferation","type":"exact"},{"name":"up-regulation of acinous cell proliferation","type":"exact"},{"name":"upregulation of acinar cell proliferation","type":"exact"},{"name":"upregulation of acinic cell proliferation","type":"exact"},{"name":"upregulation of acinous cell proliferation","type":"exact"}],"termid":"GO:1904699"}


id: GO:0021607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the accessory nerve is generated and organized. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["ISBN:0838580343","GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"accessory nerve development","termid":"GO:0021565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve morphogenesis","synonyms":[{"name":"CN XI morphogenesis","type":"related"}],"termid":"GO:0021607"}


id: PBO:0046035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 3","termid":"PBO:0046035"}


id: FYPO:0006543
data:
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id: GO:1901199
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id: PBO:0085217
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id: PBO:0067789
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id: GO:0005803
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id: SO:0002254
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id: PBO:0028054
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id: GO:0015711
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id: GO:0042014
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id: MOD:00078
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id: PR:Q9UTE6
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id: PBO:0064524
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id: GO:0042092
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id: PBO:0002367
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id: GO:1905129
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id: GO:1900003
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id: PBO:0088122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex; essential for vacuolar acidification; interacts with the V-ATPase assembly factor Vma21p in the ER; involved in V0 biogenesis","termid":"PBO:0088122"}


id: PBO:0053294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM zinc finger domain containing 1","termid":"PBO:0053294"}


id: GO:0061109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dense core granule. A dense core granule is a secretory organelle found in endocrine cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dense core granule organization","synonyms":[{"name":"dense core granule organisation","type":"exact"}],"termid":"GO:0061109"}


id: PBO:0079356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 1c","termid":"PBO:0079356"}


id: PBO:0089269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPCC569.09  ortholog, syntenic position","termid":"PBO:0089269"}


id: SO:0001137
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Right handed type II:A motif of four consecutive residues that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth. It is characterized by the dihedral angles: Residue(i+1): -140 degrees < phi < -20 degrees, +80 degrees < psi < +180 degrees. Residue(i+2): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_right_handed_type_two","secondary_identifiers":["BS:00214"],"synonyms":[{"name":"beta turn right handed type two","type":"exact"},{"name":"beta_turn_iir","type":"exact"},{"name":"type II beta turn","type":"exact"},{"name":"type II turn","type":"exact"}],"termid":"SO:0001137"}


id: PBO:0087226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Second-largest subunit of RNA polymerase III; RNA polymerase III is responsible for the transcription of tRNA and 5S RNA genes, and other low molecular weight RNAs","termid":"PBO:0087226"}


id: GO:0071699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the olfactory placode are generated and organized. The olfactory placode is a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"ectodermal placode morphogenesis","termid":"GO:0071697"},{"relation_name":"part_of","term_name":"olfactory placode development","termid":"GO:0071698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory placode morphogenesis","termid":"GO:0071699"}


id: PBO:0059564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1H","termid":"PBO:0059564"}


id: PBO:0075892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5","termid":"PBO:0075892"}


id: GO:0015093
data:
  {"annotated_genes":["SJAG_02473","SJAG_04867","SJAG_04675"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96591,99905],"is_not":false,"summary":null,"term":"GO:0015093"},{"annotations":[88546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061840"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ferrous iron (Fe(II) or Fe2+) ions from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transmembrane transporter activity","termid":"GO:0005381"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02473":null,"SJAG_04675":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ferrous iron transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1362417","Reactome:R-HSA-442368","Reactome:R-HSA-5655760","RHEA:28486","MetaCyc:TRANS-RXN-8","GO:0015639"],"synonyms":[{"name":"ferrous iron uptake transmembrane transporter activity","type":"related"}],"termid":"GO:0015093","terms_by_termid":{"GO:0015093":null,"GO:0061840":null}}


id: PBO:0062720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily R member 1 pseudogene","termid":"PBO:0062720"}


id: PBO:0048511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 15","termid":"PBO:0048511"}


id: PBO:0078495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon GAT) 1-2","termid":"PBO:0078495"}


id: PBO:0057704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1291","termid":"PBO:0057704"}


id: PBO:0090905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding forkhead transcription factor Fkh2","termid":"PBO:0090905"}


id: FYPO:0000812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole organization is abnormal. Vacuole organization results in the assembly, arrangement of constituent parts, or disassembly of a vacuole.","definition_xrefs":["PomBase:mah","GO:0007033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal vacuole organization","termid":"FYPO:0002803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vacuole organization during vegetative growth","synonyms":[{"name":"abnormal vacuolar organisation during vegetative growth","type":"exact"},{"name":"abnormal vacuolar organization during vegetative growth","type":"exact"},{"name":"abnormal vacuole organisation during vegetative growth","type":"exact"},{"name":"abnormal vacuole organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000812"}


id: PR:Q09170
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase Chk2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","termid":"PR:000030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.11c","secondary_identifiers":["UniProtKB:Q09170"],"synonyms":[{"name":"Spom972h-CHEK2","type":"exact"}],"termid":"PR:Q09170"}


id: PBO:0016115
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae SRP54","termid":"PBO:0016115"}


id: GO:0046450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dethiobiotin, a derivative of biotin formed by replacing the sulfur atom by two hydrogen atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dethiobiotin metabolic process","synonyms":[{"name":"desthiobiotin metabolic process","type":"exact"},{"name":"desthiobiotin metabolism","type":"exact"},{"name":"dethiobiotin metabolism","type":"exact"}],"termid":"GO:0046450"}


id: MOD:00777
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 182.96-182.98 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.01 Da","termid":"MOD:00770"},{"relation_name":"is_a","term_name":"residues isobaric at 182.9-183.0 Da","termid":"MOD:00778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 182.96-182.98 Da","termid":"MOD:00777"}


id: PBO:0041264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q binding protein pseudogene 1","termid":"PBO:0041264"}


id: PBO:0064583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member D","termid":"PBO:0064583"}


id: FYPO:0002882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to is normal (i.e. indistinguishable from wild type) in extent, timing, start or termination site, etc. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype","termid":"FYPO:0004847"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0000257"],"is_obsolete":false,"name":"normal transcription","synonyms":[{"name":"normal transcription, DNA-dependent","type":"exact"}],"termid":"FYPO:0002882"}


id: SO:0001091
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Binding site for any chemical group (co-enzyme, prosthetic group, etc.).","definition_xrefs":["EBIBS:GAR"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001091 non_covalent_binding_site (obsolete SO:0001091)","synonyms":[{"name":"binding","type":"related"},{"name":"binding site","type":"related"},{"name":"non covalent binding site","type":"exact"}],"termid":"SO:0001091"}


id: GO:0060821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex by a mechanism of DNA methylation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of X chromosome by DNA methylation (obsolete GO:0060821)","termid":"GO:0060821"}


id: PBO:0048124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 5","termid":"PBO:0048124"}


id: PATO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that is the extent of space between two entities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distance","termid":"PATO:0000040"}


id: PBO:0072308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 5","termid":"PBO:0072308"}


id: GO:0071657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of granulocyte colony-stimulating factor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte colony-stimulating factor production","termid":"GO:0071655"},{"relation_name":"is_a","term_name":"positive regulation of macrophage colony-stimulating factor production","termid":"GO:1901258"},{"relation_name":"positively_regulates","term_name":"granulocyte colony-stimulating factor production","termid":"GO:0071611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of granulocyte colony-stimulating factor production","synonyms":[{"name":"positive regulation of CSF3 production","type":"exact"},{"name":"positive regulation of G-CSF production","type":"exact"},{"name":"positive regulation of colony stimulating factor 3 (granulocyte) production","type":"exact"},{"name":"positive regulation of filgrastim production","type":"exact"},{"name":"positive regulation of granulocyte colony stimulating factor production","type":"exact"},{"name":"positive regulation of lenograstim production","type":"exact"},{"name":"positive regulation of pluripoietin production","type":"exact"}],"termid":"GO:0071657"}


id: GO:0070778
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92666],"is_not":false,"summary":null,"term":"GO:0070778"}]},"cv_name":"biological_process","definition":"The directed movement of L-aspartate across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate transmembrane transport","termid":"GO:0015810"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"L-aspartate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0089712"],"synonyms":[{"name":"L-aspartate transport","type":"broad"}],"termid":"GO:0070778","terms_by_termid":{"GO:0070778":null}}


id: GO:0051492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament bundle assembly","termid":"GO:0032231"},{"relation_name":"is_a","term_name":"regulation of actomyosin structure organization","termid":"GO:0110020"},{"relation_name":"regulates","term_name":"stress fiber assembly","termid":"GO:0043149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of stress fiber assembly","synonyms":[{"name":"regulation of stress fibre biosynthesis","type":"related"},{"name":"regulation of stress fibre formation","type":"exact"}],"termid":"GO:0051492"}


id: GO:0032602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. All chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation. Some chemokines are considered pro-inflammatory and can be induced during an immune response to recruit cells of the immune system to a site of infection, while others are considered homeostatic and are involved in controlling the migration of cells during normal processes of tissue maintenance or development. Chemokines are found in all vertebrates, some viruses and some bacteria.","definition_xrefs":["GOC:BHF","Wikipedia:Chemokine","ISBN:0198506732","GOC:rl","PMID:12183377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine production","secondary_identifiers":["GO:0042033","GO:0050755","GO:0090195"],"synonyms":[{"name":"chemokine anabolism","type":"exact"},{"name":"chemokine biosynthesis","type":"exact"},{"name":"chemokine biosynthetic process","type":"narrow"},{"name":"chemokine formation","type":"exact"},{"name":"chemokine metabolic process","type":"narrow"},{"name":"chemokine secretion","type":"narrow"},{"name":"chemokine synthesis","type":"exact"}],"termid":"GO:0032602"}


id: PBO:0063738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 3","termid":"PBO:0063738"}


id: PBO:0085821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed during sporulation; not required for sporulation, but gene exhibits genetic interactions with other genes required for sporulation","termid":"PBO:0085821"}


id: PBO:0065064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteoglycan 2, pro eosinophil major basic protein","termid":"PBO:0065064"}


id: PBO:0005321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tim9-Tim10 complex subunit Tim9 (predicted)","termid":"PBO:0005321"}


id: GO:0048283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of determinate inflorescences are generated and organized. A determinate inflorescence is one that can produce an undefined number of floral meristems.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflorescence morphogenesis","termid":"GO:0048281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indeterminate inflorescence morphogenesis","termid":"GO:0048283"}


id: GO:0032820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell proliferation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of natural killer cell proliferation","termid":"GO:0032817"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"natural killer cell proliferation involved in immune response","termid":"GO:0002324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell proliferation involved in immune response","synonyms":[{"name":"regulation of NK cell proliferation during immune response","type":"related"},{"name":"regulation of natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0032820"}


id: GO:0018708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a thiol = S-adenosyl-L-homocysteine + a thioether.","definition_xrefs":["EC:2.1.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"thiol S-methyltransferase activity","secondary_identifiers":["MetaCyc:THIOL-S-METHYLTRANSFERASE-RXN","UM-BBD_enzymeID:e0146","RHEA:18277","Reactome:R-HSA-175976"],"synonyms":[{"name":"S-adenosyl-L-methionine:thiol S-methyltransferase activity","type":"related"},{"name":"TMT","type":"related"},{"name":"thiol methyltransferase activity","type":"related"}],"termid":"GO:0018708"}


id: FYPO:0007403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the anaphase-promoting complex (APC) is present for longer than normal. The APC normally forms in prometaphase and disassembles before anaphase; in mutants it may remain present during anaphase.","definition_xrefs":["PomBase:mah","PMID:24583014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of anaphase-promoting complex presence","synonyms":[{"name":"APC present during mitotic anaphase","type":"narrow"},{"name":"increased duration of APC presence","type":"exact"},{"name":"increased duration of anaphase-promoting complex presence during mitotic cell cycle","type":"related"},{"name":"increased duration of anaphase-promoting complex presence during vegetative growth","type":"exact"},{"name":"increased persistence of anaphase-promoting complex","type":"related"}],"termid":"FYPO:0007403"}


id: GO:0090701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of a plant organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"plant organ formation","termid":"GO:1905393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of plant organ identity","termid":"GO:0090701"}


id: MOD:01185
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-asparagine.","definition_xrefs":["RESID:AA0003#ASP","PubMed:17962566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-asparagine residue","termid":"MOD:00012"},{"relation_name":"is_a","term_name":"amidated residue","termid":"MOD:00674"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amidated L-aspartic acid","synonyms":[{"name":"(2S)-2-amino-4-butanediamic acid","type":"exact"},{"name":"2,4-bis(azanyl)-4-oxobutanoic acid","type":"exact"},{"name":"2,4-diamino-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-3-carbamoylpropanoic acid","type":"exact"},{"name":"2-amino-4-butanediamic acid","type":"exact"},{"name":"2-aminosuccinamic acid","type":"exact"},{"name":"2-aminosuccinic acid 4-amide","type":"exact"},{"name":"4NAsp","type":"exact"},{"name":"L-asparagine","type":"exact"},{"name":"MOD_RES Amidated aspartic acid","type":"exact"},{"name":"alpha-amino-beta-carbamylpropionic acid","type":"exact"},{"name":"alpha-aminosuccinamic acid","type":"exact"},{"name":"aspartic acid 4-amide","type":"exact"},{"name":"aspartic acid beta-amide","type":"exact"},{"name":"beta-asparagine","type":"exact"}],"termid":"MOD:01185"}


id: PBO:0055423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2853","termid":"PBO:0055423"}


id: GO:0001091
data:
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id: SO:1000059
data:
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id: PBO:0026969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actin_cortical_patches_present_in_decreased_numbers","termid":"PBO:0026969"}


id: MOD:00229
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues to form alpha-1-microglobulin-Ig alpha complex chromophore.","definition_xrefs":["PubMed:11058759","PubMed:11877257","PubMed:7506257","PubMed:7535251","RESID:AA0224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1-microglobulin-Ig alpha complex chromophore","synonyms":[{"name":"BINDING Multimeric 3-hydroxykynurenine chromophore (covalent)","type":"exact"},{"name":"alpha-1-microglobulin-Ig alpha complex chromophore","type":"exact"}],"termid":"MOD:00229"}


id: PBO:0088995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II nuclear import protein Rtp1","termid":"PBO:0088995"}


id: GO:0000719
data:
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id: PBO:0048562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated olfactory signaling regulator","termid":"PBO:0048562"}


id: PBO:0110980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 2 (H blood group)","termid":"PBO:0110980"}


id: PBO:0002802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup155","termid":"PBO:0002802"}


id: PBO:0001195
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates srk1","termid":"PBO:0001195"}


id: GO:0006484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Oxidation of two cysteine sulfhydryl groups (thiols) in one protein by a disulfide bond in a second protein to form a disulfide bond in the first protein and two reduced sulfhydryls in the second. The oxidized cysteines linked by a disulfide bond is known as cystine.","definition_xrefs":["RESID:AA0025"],"gene_count":0,"genotype_count":0,"name":"obsolete protein cysteine-thiol oxidation (obsolete GO:0006484)","synonyms":[{"name":"protein cysteine-thiol oxidation","type":"exact"}],"termid":"GO:0006484"}


id: PBO:0075868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 8","termid":"PBO:0075868"}


id: GO:0009057
data:
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id: GO:0000486
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id: PBO:0000732
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id: FYPO:0003928
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id: PBO:0088870
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id: PBO:0088692
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id: GO:0001208
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id: PBO:0070771
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id: PBO:0074766
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id: GO:0030198
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id: GO:0102722
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id: GO:0043513
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id: SO:0001121
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id: PBO:0063837
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id: PBO:0061430
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id: GO:0097507
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id: GO:0070836
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id: PBO:0073804
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id: PBO:0075320
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id: SO:0001113
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A peptide region which hydrogen bonded to another region of peptide running in the oposite direction (both running N-terminal to C-terminal). This orientation is slightly less stable because it introduces nonplanarity in the inter-strand hydrogen bonding pattern. Hydrogen bonding occurs between every other C=O from one strand to every other N-H on the adjacent strand. In this case, if two atoms C-alpha (i)and C-alpha (j) are adjacent in two hydrogen-bonded beta strands, then they do not hydrogen bond to each other; rather, one residue forms hydrogen bonds to the residues that flank the other (but not vice versa). For example, residue i may form hydrogen bonds to residues j - 1 and j + 1; this is known as a wide pair of hydrogen bonds. By contrast, residue j may hydrogen-bond to different residues altogether, or to none at all. The dihedral angles (phi, psi) are about (-120 degrees, 115 degrees) in parallel sheets.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_strand","termid":"SO:0001111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"parallel_beta_strand","secondary_identifiers":["BS:00151"],"synonyms":[{"name":"parallel beta strand","type":"exact"}],"termid":"SO:0001113"}


id: GO:1900106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hyaluranon cable assembly.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of hyaluranon cable assembly","termid":"GO:1900104"},{"relation_name":"positively_regulates","term_name":"hyaluranon cable assembly","termid":"GO:0036118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of hyaluranon cable assembly","synonyms":[{"name":"activation of HA cable assembly","type":"exact"},{"name":"activation of hyaluranon cable assembly","type":"narrow"},{"name":"positive regulation of HA cable assembly","type":"exact"},{"name":"up regulation of HA cable assembly","type":"exact"},{"name":"up regulation of hyaluranon cable assembly","type":"exact"},{"name":"up-regulation of HA cable assembly","type":"exact"},{"name":"up-regulation of hyaluranon cable assembly","type":"exact"},{"name":"upregulation of HA cable assembly","type":"exact"},{"name":"upregulation of hyaluranon cable assembly","type":"exact"}],"termid":"GO:1900106"}


id: GO:0032257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a dense core granule is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of secretory granule location","termid":"GO:0032255"},{"relation_name":"part_of","term_name":"dense core granule localization","termid":"GO:0032253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of dense core granule location","synonyms":[{"name":"maintenance of dense core granule localization","type":"related"},{"name":"maintenance of dense core vesicle location","type":"exact"}],"termid":"GO:0032257"}


id: PBO:0064427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 4 pseudogene 1","termid":"PBO:0064427"}


id: PBO:0070272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 7","termid":"PBO:0070272"}


id: PBO:0067801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 103","termid":"PBO:0067801"}


id: GO:1902321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methyl-branched fatty acid.","definition_xrefs":["GOC:TermGenie","PMID:15340492","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"methyl-branched fatty acid metabolic process","termid":"GO:0097089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"methyl-branched fatty acid biosynthetic process","synonyms":[{"name":"methyl-branched fatty acid anabolism","type":"exact"},{"name":"methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"methyl-branched fatty acid formation","type":"exact"},{"name":"methyl-branched fatty acid synthesis","type":"exact"}],"termid":"GO:1902321"}


id: GO:0003045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by detection of forces within the circulatory system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by physical factors","synonyms":[{"name":"blood pressure regulation by physical factors","type":"exact"}],"termid":"GO:0003045"}


id: PBO:0086329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with ubiquitin-like N terminus; subunit of Nuclear Excision Repair Factor 2 (NEF2) with Rad4p that binds damaged DNA; enhances protein deglycosylation activity of Png1p; also involved, with Rad4p, in ubiquitylated protein turnover; Rad4p-Rad23p heterodimer binds to promoters of DNA damage response genes to repress their transcription in the absence of DNA damage","termid":"PBO:0086329"}


id: PBO:0077943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 3-1","termid":"PBO:0077943"}


id: GO:0097389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 21 (CCL21) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 21 production","synonyms":[{"name":"CCL21 production","type":"exact"}],"termid":"GO:0097389"}


id: GO:0017192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of a glutamine residue in protein to form the N5-methyl-L-glutamine derivative. The occurrence of this modification has not been confirmed. Its annotation in sequence databases is either due to the misidentification of 2-pyrrolidone-5-carboxylic acid, or to inappropriate homolog comparisons when proteolytic modification is more probable.","definition_xrefs":["RESID:AA0045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-glutamine modification","termid":"GO:0018199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"N-terminal peptidyl-glutamine acetylation","termid":"GO:0017192"}


id: PBO:0011504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase, mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0011504"}


id: GO:2000333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of blood microparticle formation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of blood microparticle formation","termid":"GO:2000332"},{"relation_name":"negatively_regulates","term_name":"blood microparticle formation","termid":"GO:0072564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood microparticle formation","synonyms":[{"name":"negative regulation of microparticle generation","type":"exact"},{"name":"negative regulation of microparticle release","type":"exact"}],"termid":"GO:2000333"}


id: PBO:0069182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 436, pseudogene","termid":"PBO:0069182"}


id: GO:0055101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of a glycerophospholipase, an enzyme that catalyzes of the hydrolysis of a glycerophospholipid.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete glycerophospholipase inhibitor activity (obsolete GO:0055101)","synonyms":[{"name":"glycerophospholipase inhibitor activity","type":"exact"}],"termid":"GO:0055101"}


id: PR:Q09838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional regulator prz1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:12637524","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional regulator prz1","termid":"PR:000027513"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulator prz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.13c","secondary_identifiers":["PR:000027514","UniProtKB:Q09838"],"synonyms":[{"name":"SPAC4G8.13C","type":"related"},{"name":"Spom972h-prz1","type":"exact"}],"termid":"PR:Q09838"}


id: GO:0071027
data:
  {"annotated_genes":["SJAG_02622","SJAG_02275","SJAG_01431","SJAG_02879","SJAG_00456","SJAG_04818","SJAG_04768","SJAG_01830","SJAG_05243","SJAG_01331","SJAG_04084","SJAG_01717","SJAG_00961","SJAG_04586","SJAG_00425","SJAG_04006","SJAG_02621","SJAG_04198","SJAG_01064","SJAG_04360","SJAG_00701","SJAG_02720","SJAG_00452","SJAG_01191","SJAG_03179","SJAG_03047","SJAG_01818","SJAG_04574","SJAG_03939","SJAG_02382","SJAG_00854","SJAG_03745","SJAG_03883","SJAG_04601","SJAG_04153","SJAG_01176","SJAG_01867","SJAG_04321","SJAG_03984","SJAG_02005","SJAG_02723","SJAG_04500","SJAG_01521","SJAG_03454","SJAG_04824","SJAG_04025","SJAG_03680","SJAG_01540","SJAG_01412"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86747,93362,103553,114180],"is_not":false,"summary":null,"term":"GO:0071027"},{"annotations":[85910],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0120271"},{"annotations":[114176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180036"},{"annotations":[100495,85567,111975,89164,91063,102547,111528,114363,92022,101340,98181,97139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071028"},{"annotations":[89543,103550,93359,109364,114177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071031"},{"annotations":[112427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071032"},{"annotations":[86903,111633,91107,88461,84968,102389,105351,105883,83629,114178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071030"},{"annotations":[114156,88341,98514,106580,110089,84508,102350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"},{"annotations":[88342,114179,99090,95871,107955,109365,108852,111460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071039"},{"annotations":[102549,111977,92024,114365,98183,111530,89166,88344,84509,93361,109366,100497,101342,103552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071035"},{"annotations":[109367,88345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071036"},{"annotations":[109368,88346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071037"},{"annotations":[114181,86978,95196,100401,107393,105352,87962,86904,88347,103555,83630,105332,92837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033621"},{"annotations":[102747],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120272"},{"annotations":[88351,102553,103559,114369,100501,93367,109371,89171,92029,98187,101346,111980,111533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071038"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant RNAs within the nucleus.","definition_xrefs":["GOC:krc","PMID:18644474","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA surveillance","termid":"GO:0071025"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_00452":null,"SJAG_00456":null,"SJAG_00701":null,"SJAG_00854":null,"SJAG_00961":null,"SJAG_01064":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01331":null,"SJAG_01412":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01540":null,"SJAG_01717":null,"SJAG_01818":null,"SJAG_01830":null,"SJAG_01867":null,"SJAG_02005":null,"SJAG_02275":null,"SJAG_02382":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_02723":null,"SJAG_02879":null,"SJAG_03047":null,"SJAG_03179":null,"SJAG_03454":null,"SJAG_03680":null,"SJAG_03745":null,"SJAG_03883":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04025":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04198":null,"SJAG_04321":null,"SJAG_04360":null,"SJAG_04500":null,"SJAG_04574":null,"SJAG_04586":null,"SJAG_04601":null,"SJAG_04768":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear RNA surveillance","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear RNA quality control","type":"exact"},{"name":"nuclear aberrant RNA catabolic process","type":"exact"}],"termid":"GO:0071027","terms_by_termid":{"GO:0033621":null,"GO:0071027":null,"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null,"GO:0071035":null,"GO:0071036":null,"GO:0071037":null,"GO:0071038":null,"GO:0071039":null,"GO:0071040":null,"GO:0120271":null,"GO:0120272":null,"GO:0180036":null}}


id: PBO:0046504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F1-regulated inhibitor of cell death","termid":"PBO:0046504"}


id: PBO:0066224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 27","termid":"PBO:0066224"}


id: PBO:0061988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 8 pseudogene","termid":"PBO:0061988"}


id: GO:0030289
data:
  {"annotated_genes":["SJAG_00369","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102668,103499],"is_not":false,"summary":null,"term":"GO:0030289"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex formed by the catalytic subunit of protein phosphatase 4 plus one or more regulatory subunits.","definition_xrefs":["GOC:bhm","PMID:10026142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein phosphatase 4 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030289","terms_by_termid":{"GO:0030289":null}}


id: PBO:0060833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 E3 ubiquitin protein ligase","termid":"PBO:0060833"}


id: FYPO:0000521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which peroxisome localization is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal peroxisome localization","synonyms":[{"name":"abnormal peroxisomal distribution","type":"exact"},{"name":"abnormal peroxisome localisation","type":"exact"},{"name":"abnormal peroxisome localization during mitotic cell cycle","type":"related"},{"name":"abnormal peroxisome localization during vegetative growth","type":"exact"},{"name":"peroxisomal distribution: abnormal","type":"related"}],"termid":"FYPO:0000521"}


id: PBO:0067874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 176","termid":"PBO:0067874"}


id: PBO:0051983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jagged canonical Notch ligand 2","termid":"PBO:0051983"}


id: GO:0031610
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subunits of the regulatory particle that directly associate with the core complex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle, base subcomplex","termid":"GO:0008540"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome regulatory particle","termid":"GO:0031598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear proteasome regulatory particle, base subcomplex","termid":"GO:0031610"}


id: FYPO:0004439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is curved (i.e. follows a smooth bend rather than a straight line) and longer than normal during anaphase.","definition_xrefs":["PMID:17352737","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long mitotic spindle","termid":"FYPO:0000733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000120","FYPO:0002399","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"long curved mitotic spindle during anaphase","synonyms":[{"name":"curved mitotic spindle with increased mitotic spindle length during anaphase","type":"exact"},{"name":"elongated curved mitotic spindle during anaphase","type":"exact"},{"name":"long curved bipolar mitotic spindle during anaphase","type":"exact"},{"name":"long curved mitotic spindle during anaphase during vegetative growth","type":"exact"},{"name":"long curved mitotic spindles during anaphase","type":"exact"},{"name":"long curved spindle during anaphase of mitosis","type":"exact"},{"name":"long curved spindle during mitotic anaphase","type":"exact"},{"name":"long mitotic spindle during anaphase, elongating beyond cell end resulting in long curved spindle","type":"exact"}],"termid":"FYPO:0004439"}


id: GO:0018733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,4-dihydrocoumarin + H2O = 3-(2-hydroxyphenyl) propionate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,4-dihydrocoumarin hydrolase activity (obsolete GO:0018733)","termid":"GO:0018733"}


id: GO:0051466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of corticotropin-releasing hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of corticotropin-releasing hormone secretion","termid":"GO:0043397"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"corticotropin-releasing hormone secretion","termid":"GO:0043396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of corticotropin-releasing hormone secretion","synonyms":[{"name":"activation of corticotropin-releasing hormone secretion","type":"narrow"},{"name":"positive regulation of CRF secretion","type":"exact"},{"name":"positive regulation of CRH secretion","type":"exact"},{"name":"positive regulation of corticotropin-releasing factor secretion","type":"exact"},{"name":"stimulation of corticotropin-releasing hormone secretion","type":"narrow"},{"name":"up regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"up-regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"upregulation of corticotropin-releasing hormone secretion","type":"exact"}],"termid":"GO:0051466"}


id: PBO:0027224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_division_timing_change_upon_nitrogen_source_shift","termid":"PBO:0027224"}


id: GO:0061219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a mesonephric mesenchyme from an initial condition to its mature state. This process begins with the formation of mesonephric mesenchyme and ends with the mature structure. Mesonephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme development","termid":"GO:0072074"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchyme development","termid":"GO:0061219"}


id: GO:0015387
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + H+(out) = K+(in) + H+(in).","definition_xrefs":["TC:2.A.38.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"potassium:proton symporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-3","RHEA:28490"],"synonyms":[{"name":"potassium:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015387"}


id: GO:0141009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retrotransposon silencing mechanism in which mRNAs transcribed from transposons are targeted for degradation by a Piwi-associated RNA (piRNA).","definition_xrefs":["PMID:22121019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA-mediated gene silencing by mRNA destabilization","termid":"GO:0140991"},{"relation_name":"is_a","term_name":"retrotransposon silencing by mRNA destabilization","termid":"GO:0141008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"piRNA-mediated retrotransposon silencing by mRNA destabilization","synonyms":[{"name":"piRNA-mediated post-transcriptional retrotransposon silencing","type":"exact"}],"termid":"GO:0141009"}


id: PBO:0071464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 5","termid":"PBO:0071464"}


id: GO:0033595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a genistein stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hydroxyisoflavone","termid":"GO:0033594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to genistein","termid":"GO:0033595"}


id: PBO:0072268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 6","termid":"PBO:0072268"}


id: PBO:0086897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter; member of the sugar porter family; YFL040W is not an essential gene; may have a role in intracellular sterol transport","termid":"PBO:0086897"}


id: PBO:0062341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily J member 1","termid":"PBO:0062341"}


id: PATO:0001048
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001048 relative resistance (obsolete PATO:0001048)","termid":"PATO:0001048"}


id: PBO:0045111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermokine","termid":"PBO:0045111"}


id: PBO:0054793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2207","termid":"PBO:0054793"}


id: GO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a natural killer cell progenitor.","definition_xrefs":["PMID:16551264","PMID:16551251","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid progenitor cell differentiation","termid":"GO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell progenitor differentiation","termid":"GO:0002321"}


id: GO:0072542
data:
  {"annotated_genes":["SJAG_00095","SJAG_04968","SJAG_00369","SJAG_00078","SJAG_03681","SJAG_00526","SJAG_01270","SJAG_04638"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89019,93811,102672,111070,111996,114017],"is_not":false,"summary":null,"term":"GO:0072542"},{"annotations":[93972,86087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008160"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a protein phosphatase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activator activity","termid":"GO:0019211"},{"relation_name":"is_a","term_name":"protein phosphatase regulator activity","termid":"GO:0019888"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00095":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_01270":null,"SJAG_03681":null,"SJAG_04638":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"protein phosphatase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0071862","GO:0072543"],"synonyms":[{"name":"protein phosphatase 2 activator activity","type":"narrow"},{"name":"protein phosphatase type 1 activator activity","type":"narrow"},{"name":"protein phosphatase type 2A activator activity","type":"narrow"}],"termid":"GO:0072542","terms_by_termid":{"GO:0008160":null,"GO:0072542":null}}


id: SO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TCS element is a (yeast) transcription factor binding site, bound by the TEA DNA binding domain (DBD) of transcription factors. The consensus site is CATTCC or CATTCT.","definition_xrefs":["PMID:20118212","SO:ke","PMID:1489142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCS_element","synonyms":[{"name":"TCS element","type":"exact"},{"name":"TEA Consensus Sequence ","type":"exact"}],"termid":"SO:0002044"}


id: PBO:0081333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 133","termid":"PBO:0081333"}


id: PBO:0039723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3D","termid":"PBO:0039723"}


id: PBO:0059216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro","termid":"PBO:0059216"}


id: PBO:0055649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3089","termid":"PBO:0055649"}


id: GO:0045457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"ecdysteroid secretion","termid":"GO:0045457"}


id: PATO:0001327
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's being capable of division into symmetrical halves by only one longitudinal plane passing through the axis.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral symmetry","termid":"PATO:0001324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zygomorphic","termid":"PATO:0001327"}


id: PBO:0034646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_C-shaped_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034646"}


id: PBO:0091964
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously curated onto incorrect strand","termid":"PBO:0091964"}


id: GO:1902570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a nucleolus.","definition_xrefs":["GOC:TermGenie","PMID:22809626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nucleolus","synonyms":[{"name":"protein localisation in nucleolus","type":"exact"},{"name":"protein localisation to nucleolus","type":"exact"},{"name":"protein localization in nucleolus","type":"exact"}],"termid":"GO:1902570"}


id: PBO:0077142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 2","termid":"PBO:0077142"}


id: PBO:0075265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 18","termid":"PBO:0075265"}


id: PBO:0051143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-21","termid":"PBO:0051143"}


id: SO:0002048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A reading frame that could encode a full-length protein but which contains obvious mid-sequence disablements (frameshifts or premature stop codons).","definition_xrefs":["SGD:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reading_frame","termid":"SO:0000717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disabled_reading_frame","synonyms":[{"name":"dORF","type":"exact"},{"name":"disabled ORF","type":"exact"},{"name":"disabled_reading frame","type":"related"}],"termid":"SO:0002048"}


id: PR:Q09329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase UBR7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mlo2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.05","secondary_identifiers":["UniProtKB:Q09329"],"synonyms":[{"name":"Spom972h-UBR7","type":"exact"}],"termid":"PR:Q09329"}


id: PATO:0001383
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A polyploidy quality inhering in a bearer by virtue of the bearer's containing five homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Pentaploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"PATO:0001377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentaploid","termid":"PATO:0001383"}


id: PBO:0066527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 3","termid":"PBO:0066527"}


id: GO:0140318
data:
  {"annotated_genes":["SJAG_00687","SJAG_05259","SJAG_01640","SJAG_02208","SJAG_02330","SJAG_03415","SJAG_01597","SJAG_04218","SJAG_03502","SJAG_04208","SJAG_03358","SJAG_00373","SJAG_02077","SJAG_01949","SJAG_04996","SJAG_04203","SJAG_01435","SJAG_01879","SJAG_03515","SJAG_02524","SJAG_03560","SJAG_00959","SJAG_00175"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84792,86509,88882,112364],"is_not":false,"summary":null,"term":"GO:0140318"},{"annotations":[112405,97122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140567"},{"annotations":[94166,102260,105436,111321,103391,105729,95531,102255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008320"},{"annotations":[87008,103692,96421,92996,101270,103670,99390,95642,107898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Directly binding to a specific protein and delivering it to a specific cellular location.","definition_xrefs":["PMID:18706423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter activity","termid":"GO:0005215"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_00373":null,"SJAG_00687":null,"SJAG_00959":null,"SJAG_01435":null,"SJAG_01597":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_01949":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02524":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04203":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215"],"is_obsolete":false,"name":"protein transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9662818","Reactome:R-HSA-2248891","Reactome:R-HSA-9662747"],"synonyms":[{"name":"protein carrier activity","type":"related"},{"name":"protein transport chaperone","type":"related"}],"termid":"GO:0140318","terms_by_termid":{"GO:0008320":null,"GO:0015450":null,"GO:0140318":null,"GO:0140567":null}}


id: GO:0106333
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Comprised of at least NLRP5, OOEP, TLE6, and KHDC3/KHDC3L with evidence of additional SCMC-associated proteins that interact with one or multiple members of the core complex.","definition_xrefs":["PMID:28992324","PMID:18804437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"subcortical maternal complex","synonyms":[{"name":"SCMC","type":"related"}],"termid":"GO:0106333"}


id: PBO:0086074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function thought to be involved in endocytosis; physically interacts with Ede1p and is found at endocytic sites at cell periphery during early stages of endocytosis; green fluorescent protein (GFP)-fusion protein localizes to bud neck; potential Cdc28p substrate; similar to S. pombe Pal1 protein; relocalizes from bud neck to cytoplasm upon DNA replication stress; PAL1 has a paralog, YHR097C, that arose from the whole genome duplication","termid":"PBO:0086074"}


id: PBO:0079941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"usherin","termid":"PBO:0079941"}


id: SO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA motif that is found in eukaryotic rDNA repeats, and is a site of replication fork pausing.","definition_xrefs":["PMID:17614787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating_type_region_replication_fork_barrier","synonyms":[{"name":"mating type region replication fork barrier","type":"exact"}],"termid":"SO:0002021"}


id: FYPO:0000510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000301"],"is_obsolete":false,"name":"abnormal nuclear fusion during mating","synonyms":[{"name":"abnormal karyogamy","type":"exact"},{"name":"abnormal karyogamy involved in conjugation with cellular fusion","type":"exact"},{"name":"abnormal nuclear fusion during conjugation","type":"exact"},{"name":"nuclear fusion during mating: abnormal","type":"related"}],"termid":"FYPO:0000510"}


id: PBO:0005275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase (predicted)","termid":"PBO:0005275"}


id: GO:0005645
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RAN-binding protein (obsolete GO:0005645)","synonyms":[{"name":"RAN-binding protein","type":"exact"}],"termid":"GO:0005645"}


id: PBO:0060344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IXB","termid":"PBO:0060344"}


id: GO:0002671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of B cell tolerance induction","termid":"GO:0002662"},{"relation_name":"is_a","term_name":"regulation of B cell anergy","termid":"GO:0002670"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte anergy","termid":"GO:0002912"},{"relation_name":"negatively_regulates","term_name":"B cell anergy","termid":"GO:0002515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell anergy","synonyms":[{"name":"down regulation of B cell anergy","type":"exact"},{"name":"down-regulation of B cell anergy","type":"exact"},{"name":"downregulation of B cell anergy","type":"exact"},{"name":"inhibition of B cell anergy","type":"narrow"},{"name":"negative regulation of B lymphocyte anergy","type":"exact"},{"name":"negative regulation of B-cell anergy","type":"exact"},{"name":"negative regulation of B-lymphocyte anergy","type":"exact"}],"termid":"GO:0002671"}


id: FYPO:0006276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyorrhexis, the nuclear fragmentation typical of cell death by apoptosis, occurs at a greater frequency than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["GO:0097194","PMID:18653539","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased karyorrhexis during stationary phase","synonyms":[{"name":"fragmented nuclear envelope during stationary phase entry","type":"related"},{"name":"increased apoptotic nuclear fragmentation during stationary phase","type":"exact"}],"termid":"FYPO:0006276"}


id: SO:0002166
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ref_miRNA (RefSeq-miRNA) sequence is assigned at the creation of a new mature miRNA entry in a database. The ref_miRNA sequence designation remains unchanged even if a different isomiR is later shown to be expressed at a higher level. A ref_miRNA can be produced by one or multiple pre-miRNA.","definition_xrefs":["PMID:26453491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA","termid":"SO:0000276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ref_miRNA","synonyms":[{"name":"RefSeq miRNA","type":"exact"},{"name":"RefSeq-miRNA","type":"exact"},{"name":"ref miRNA","type":"exact"}],"termid":"SO:0002166"}


id: GO:1903828
data:
  {"annotated_genes":["SJAG_03970","SJAG_01716","SJAG_03591","SJAG_01373","SJAG_01084","SJAG_01311","SJAG_04597","SJAG_00883","SJAG_02392","SJAG_05978","SJAG_01825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[102437,102342,111423,87839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"},{"annotations":[101894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[91960,87070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903067"},{"annotations":[90515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[103327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"},{"annotations":[110563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[91961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a protein localization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01084":null,"SJAG_01311":null,"SJAG_01373":null,"SJAG_01716":null,"SJAG_01825":null,"SJAG_02392":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_04597":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cellular protein localisation","type":"exact"},{"name":"down regulation of cellular protein localization","type":"exact"},{"name":"down-regulation of cellular protein localisation","type":"exact"},{"name":"down-regulation of cellular protein localization","type":"exact"},{"name":"downregulation of cellular protein localisation","type":"exact"},{"name":"downregulation of cellular protein localization","type":"exact"},{"name":"inhibition of cellular protein localisation","type":"narrow"},{"name":"inhibition of cellular protein localization","type":"narrow"},{"name":"negative regulation of cellular protein localisation","type":"exact"},{"name":"negative regulation of cellular protein localization","type":"exact"}],"termid":"GO:1903828","terms_by_termid":{"GO:0042308":null,"GO:0042997":null,"GO:0140325":null,"GO:1900181":null,"GO:1902543":null,"GO:1903067":null,"GO:1903077":null,"GO:1905412":null}}


id: GO:0062188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + N-(11,12-epoxy-5Z,8Z,14Z-eicosatrienoyl)-ethanolamine + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:53144","PMID:21289075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anandamide epoxidase activity","termid":"GO:0062186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"anandamide 11,12 epoxidase activity","termid":"GO:0062188"}


id: GO:0042008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-18 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-18 receptor activity","synonyms":[{"name":"IL-18 receptor activity","type":"exact"},{"name":"IL-18R","type":"exact"}],"termid":"GO:0042008"}


id: PBO:0061644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 pseudogene 2","termid":"PBO:0061644"}


id: GO:2001079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-D-Glc.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-D-Glc binding","termid":"GO:2001079"}


id: FYPO:0001379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tacrolimus than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to tacrolimus","synonyms":[{"name":"resistance to FK506","type":"exact"},{"name":"resistance to tacrolimus during mitotic cell cycle","type":"related"},{"name":"resistance to tacrolimus during vegetative growth","type":"exact"},{"name":"resistant to tacrolimus","type":"exact"}],"termid":"FYPO:0001379"}


id: PBO:0078106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 13","termid":"PBO:0078106"}


id: SO:0001513
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion of extension of a tandem repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem","termid":"SO:0001513"}


id: PBO:0038612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate synthase homolog (inactive)","termid":"PBO:0038612"}


id: PATO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The number of parts of a particular type that the bearer entity has. This is a relational quality, and thus holds between two entities: the bearer of the quality, and the type of parts.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has number of","secondary_identifiers":["OBO_REL:has_part"],"synonyms":[{"name":"cardinality","type":"related"},{"name":"extra or missing physical or functional parts","type":"exact"},{"name":"has or lacks parts of type","type":"exact"},{"name":"mereological quality","type":"exact"},{"name":"number","type":"related"},{"name":"number of","type":"exact"}],"termid":"PATO:0001555"}


id: GO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded compartment containing crystals of phytic acid and proteins characteristic of a lytic vacuole, found within a storage vacuole.","definition_xrefs":["PMID:11739490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lytic vacuole","termid":"GO:0000323"},{"relation_name":"part_of","term_name":"protein storage vacuole","termid":"GO:0000326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"lytic vacuole within protein storage vacuole","termid":"GO:0000327"}


id: GO:0090128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent of synapse maturation, the process that organizes a synapse so that it attains its fully functional state.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"synapse maturation","termid":"GO:0060074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse maturation","termid":"GO:0090128"}


id: PBO:0054762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2174","termid":"PBO:0054762"}


id: GO:0050908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in visual perception in which a light stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of visible light","termid":"GO:0009584"},{"relation_name":"is_a","term_name":"detection of light stimulus involved in sensory perception","termid":"GO:0050962"},{"relation_name":"part_of","term_name":"visual perception","termid":"GO:0007601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of light stimulus involved in visual perception","synonyms":[{"name":"sensory detection of light during visual perception","type":"exact"},{"name":"sensory detection of light stimulus during visual perception","type":"exact"},{"name":"sensory transduction of light during visual perception","type":"exact"},{"name":"sensory transduction of light stimulus during visual perception","type":"exact"},{"name":"visual perception, detection of light stimulus","type":"exact"},{"name":"visual perception, sensory transduction during perception of light","type":"exact"},{"name":"visual perception, sensory transduction of light stimulus","type":"exact"}],"termid":"GO:0050908"}


id: PBO:0088545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAC3/GANP/THP3 family protein, human LENG8 ortholog","termid":"PBO:0088545"}


id: GO:0047160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkyl-sn-glycerol 3-phosphate + acetyl-CoA = 1-alkyl-2-acetyl-sn-glycerol 3-phosphate + CoA.","definition_xrefs":["EC:2.3.1.105","RHEA:18557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alkylglycerophosphate 2-O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03455","MetaCyc:2.3.1.105-RXN"],"synonyms":[{"name":"acetyl-CoA:1-alkyl-sn-glycero-3-phosphate 2-O-acetyltransferase activity","type":"related"},{"name":"alkyllyso-GP:acetyl-CoA acetyltransferase activity","type":"related"}],"termid":"GO:0047160"}


id: PBO:0054672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2078","termid":"PBO:0054672"}


id: GO:0016143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving S-glycosides, any compound in which a glycosyl group has been substituted into a thiol group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"S-glycoside metabolic process","synonyms":[{"name":"S-glycoside metabolism","type":"exact"},{"name":"thioglycoside metabolic process","type":"exact"},{"name":"thioglycoside metabolism","type":"exact"}],"termid":"GO:0016143"}


id: FYPO:0006447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cleavage furrow does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"},{"relation_name":"is_a","term_name":"abolished protein localization to cell periphery during vegetative growth","termid":"FYPO:0005571"},{"relation_name":"is_a","term_name":"abolished protein localization to membrane during vegetative growth","termid":"FYPO:0005757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to cleavage furrow during vegetative growth","synonyms":[{"name":"abolished protein localization to cleavage furrow during mitotic cell cycle","type":"related"},{"name":"protein absent from cleavage furrow during vegetative growth","type":"related"},{"name":"protein localization to cleavage furrow abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006447"}


id: PBO:0088028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein; component of the small (ribosomal) subunit (SSU) processosome containing U3 snoRNA; required for the biogenesis of18S rRNA","termid":"PBO:0088028"}


id: FYPO:0000914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-ammonia ligase (also known as glutamine synthetase) activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal glutamate-ammonia ligase activity","synonyms":[{"name":"normal GS activity","type":"exact"},{"name":"normal glutamine synthetase activity","type":"exact"},{"name":"normal glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"FYPO:0000914"}


id: PBO:0072121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 10","termid":"PBO:0072121"}


id: GO:0072712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thiabendazole stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to thiabendazole","synonyms":[{"name":"response to TBZ","type":"exact"}],"termid":"GO:0072712"}


id: PBO:0038755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 3B","termid":"PBO:0038755"}


id: GO:0048846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The long distance growth of a single cell process, that is involved in the migration of an axon growth cone, where the migration is directed to a specific target site by a combination of attractive and repulsive cues.","definition_xrefs":["GOC:jid","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon extension","termid":"GO:0048675"},{"relation_name":"is_a","term_name":"neuron projection extension involved in neuron projection guidance","termid":"GO:1902284"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon extension involved in axon guidance","termid":"GO:0048846"}


id: GO:0102785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: violaxanthin + 2 O2 = 2 5,6-epoxy-3-hydroxy-9-apo-beta-caroten-9-one + 4,9-dimethyldodeca-2,4,6,8,10-pentaenedial.","definition_xrefs":["PMID:11316814","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"violaxanthin oxygenase activity","secondary_identifiers":["MetaCyc:RXN-7886"],"termid":"GO:0102785"}


id: GO:0075292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of aplanospore formation, a process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sporangiospore formation","termid":"GO:0075288"},{"relation_name":"is_a","term_name":"regulation of aplanospore formation","termid":"GO:0075290"},{"relation_name":"negatively_regulates","term_name":"aplanospore formation","termid":"GO:0075289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aplanospore formation","termid":"GO:0075292"}


id: PBO:0001793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin family C2 domain protein, Syn1","termid":"PBO:0001793"}


id: PBO:0026804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026804"}


id: GO:0052877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and a copper protein is the acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, with a copper protein as acceptor","secondary_identifiers":["EC:1.4.9.-"],"termid":"GO:0052877"}


id: PBO:0038911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F1","termid":"PBO:0038911"}


id: PATO:0001766
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a cell by virtue of its anisotropic intracellular organization.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001766 cellular polarity (obsolete PATO:0001766)","termid":"PATO:0001766"}


id: GO:1902085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fumagillin.","definition_xrefs":["PMID:23488861","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"fumagillin metabolic process","termid":"GO:1902084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"fumagillin catabolic process","synonyms":[{"name":"fumagillin breakdown","type":"exact"},{"name":"fumagillin catabolism","type":"exact"},{"name":"fumagillin degradation","type":"exact"}],"termid":"GO:1902085"}


id: PBO:0085404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein of unknown function; involved in the proteolytic activation of Rim101p in response to alkaline pH; interacts with Rim21p and Dfg16p to form a pH-sensing complex in the Rim101 pathway and is required to maintain Rim21p levels; has similarity to A. nidulans PalI;","termid":"PBO:0085404"}


id: PBO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.41","termid":"PBO:0000723"}


id: GO:0010736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a serum response element (SRE), a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.","definition_xrefs":["GOC:dph","GOC:tb","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0000976","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"serum response element binding","termid":"GO:0010736"}


id: GO:0070803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of metula development, a process that leads to the formation of metulae. Metulae are elongated mononucleate cells that bud from the surface of the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of metula development","termid":"GO:0070802"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"metula development","termid":"GO:0070789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metula development","termid":"GO:0070803"}


id: PBO:0063069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pannexin 2","termid":"PBO:0063069"}


id: PATO:0002424
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's having two or more entities that extend from a common point in different directions.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent from","termid":"PATO:0002424"}


id: GO:0052198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of peptidase activity in other organism involved in symbiotic interaction (obsolete GO:0052198)","synonyms":[{"name":"modulation of protease activity in other organism during symbiotic interaction","type":"related"},{"name":"modulation of protease activity in other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0052198"}


id: PR:Q9URZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URZ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC767.01c","synonyms":[{"name":"Spom972h-vps1","type":"exact"}],"termid":"PR:Q9URZ5"}


id: GO:0007624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific actions or reactions of an organism that recur with a regularity more frequent than every 24 hours.","definition_xrefs":["GOC:jl","PMID:19708721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythmic process","termid":"GO:0048511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ultradian rhythm","termid":"GO:0007624"}


id: FYPO:0000489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion distribution is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion organization","termid":"FYPO:0000809"},{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitochondrial distribution","synonyms":[{"name":"abnormal mitochondrial distribution during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial distribution during vegetative growth","type":"exact"},{"name":"mitochondrial distribution: abnormal","type":"related"}],"termid":"FYPO:0000489"}


id: GO:0019831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chromate sensitivity/resistance (obsolete GO:0019831)","synonyms":[{"name":"chromate sensitivity/resistance","type":"exact"}],"termid":"GO:0019831"}


id: PBO:0060912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEXN antisense RNA 1","termid":"PBO:0060912"}


id: FYPO:0000854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning in regions of euchromatin is abnormal. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["PomBase:mah","GO:0016584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning","termid":"FYPO:0000853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"abnormal nucleosome positioning in euchromatin","synonyms":[{"name":"abnormal nucleosome occupancy in euchromatin","type":"related"},{"name":"abnormal nucleosome positioning in euchromatin during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome positioning in euchromatin during vegetative growth","type":"exact"},{"name":"abnormal nucleosome spacing in euchromatin","type":"exact"}],"termid":"FYPO:0000854"}


id: PBO:0082666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the core factor (CF) rDNA transcription factor complex; CF is required for transcription of 35S rRNA genes by RNA polymerase I and is composed of Rrn6p, Rrn7p, and Rrn11p","termid":"PBO:0082666"}


id: PBO:0072757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 7","termid":"PBO:0072757"}


id: FYPO:0006939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction progresses in a radially asymmetric fashion.","definition_xrefs":["PomBase:mah","PMID:30709916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0000032","FYPO:0005447","FYPO:0004803"],"is_obsolete":false,"name":"asymmetric actomyosin contractile ring contraction","synonyms":[{"name":"asymmetric actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"asymmetric actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"non-concentric actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0006939"}


id: PBO:0085860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; not an essential gene; induced by treatment with 8-methoxypsoralen and UVA irradiation; relocalizes from nucleus to vacuole upon DNA replication stress; YLR297W has a paralog, YOR186W, that arose from the whole genome duplication","termid":"PBO:0085860"}


id: PBO:0058251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4538","termid":"PBO:0058251"}


id: GO:0098723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myofibril of a skeletal muscle fiber.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"skeletal muscle myofibril","termid":"GO:0098723"}


id: GO:0098930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules in axons.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axo-dendritic transport","termid":"GO:0008088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"axonal transport","secondary_identifiers":["Wikipedia:Axoplasmic_transport"],"synonyms":[{"name":"axon cargo transport","type":"exact"},{"name":"axoplasmic transport","type":"exact"}],"termid":"GO:0098930"}


id: GO:0097732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-motile cilium where the axoneme has a ring of nine outer microtubule doublets plus two central microtubules (and is therefore called a 9+2 axoneme).","definition_xrefs":["GOC:cilia","PMID:22118931","PMID:21307074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-motile cilium","termid":"GO:0097730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"9+2 non-motile cilium","synonyms":[{"name":"9+2 immotile cilium","type":"related"},{"name":"non-motile 9+2 cilium","type":"exact"}],"termid":"GO:0097732"}


id: PBO:0034319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-represses_expression_of","termid":"PBO:0034319"}


id: PBO:0069613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 890, pseudogene","termid":"PBO:0069613"}


id: PBO:0071019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 21","termid":"PBO:0071019"}


id: PBO:0014273
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUppressor of Cdc2 ts-mutations","termid":"PBO:0014273"}


id: PBO:0062357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily R member 1 pseudogene","termid":"PBO:0062357"}


id: PBO:0071128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 130","termid":"PBO:0071128"}


id: PBO:0040629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG3 associated nuclear protein","termid":"PBO:0040629"}


id: PBO:0074232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC47A1 pseudogene 1","termid":"PBO:0074232"}


id: PBO:0079499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin like 1 pseudogene 1","termid":"PBO:0079499"}


id: MOD:01768
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a palmitoleyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"palmitoleylated residue","termid":"MOD:01423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-palmitoleylated residue","termid":"MOD:01768"}


id: PBO:0045151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAH8 antisense RNA 1","termid":"PBO:0045151"}


id: GO:0070857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"is_a","term_name":"regulation of bile acid metabolic process","termid":"GO:1904251"},{"relation_name":"regulates","term_name":"bile acid biosynthetic process","termid":"GO:0006699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of bile acid biosynthetic process","synonyms":[{"name":"regulation of bile acid anabolism","type":"exact"},{"name":"regulation of bile acid biosynthesis","type":"exact"},{"name":"regulation of bile acid formation","type":"exact"},{"name":"regulation of bile acid synthesis","type":"exact"}],"termid":"GO:0070857"}


id: PBO:0039619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANXA2R overlapping transcript 1","termid":"PBO:0039619"}


id: PBO:0088759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline-phosphate cytidylyltransferase Pcy1","termid":"PBO:0088759"}


id: PBO:0070703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 7","termid":"PBO:0070703"}


id: FYPO:0005597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome","termid":"FYPO:0004996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to centromere","synonyms":[{"name":"abnormal protein localisation to centromere","type":"exact"},{"name":"abnormal protein localisation to chromosome, centromeric region","type":"exact"},{"name":"abnormal protein localization to chromosome, centric region","type":"exact"},{"name":"abnormal protein localization to chromosome, centromeric region","type":"exact"}],"termid":"FYPO:0005597"}


id: PBO:0054329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1722","termid":"PBO:0054329"}


id: GO:0046028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of electrons from the cytochrome b6/f complex of photosystem II.","definition_xrefs":["GOC:ai","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity","synonyms":[{"name":"plastocyanin","type":"narrow"}],"termid":"GO:0046028"}


id: PR:O13612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nep2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-specific protease 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.02c","synonyms":[{"name":"Spom972h-nep2","type":"exact"},{"name":"meiotically up-regulated gene 120 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13612"}


id: GO:0051744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: divinyl protochlorophyllide a + NADPH + H+ = monovinyl protochlorophyllide a + NADP+.","definition_xrefs":["MetaCyc:RXN1F-72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3,8-divinyl protochlorophyllide a 8-vinyl reductase activity","secondary_identifiers":["RHEA:48884"],"termid":"GO:0051744"}


id: PBO:0000404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Erd1 homolog (predicted)","termid":"PBO:0000404"}


id: PBO:0064441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich nuclear receptor coactivator 2 pseudogene 1","termid":"PBO:0064441"}


id: GO:0090027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of monocyte chemotaxis.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte chemotaxis","termid":"GO:0002689"},{"relation_name":"is_a","term_name":"negative regulation of mononuclear cell migration","termid":"GO:0071676"},{"relation_name":"is_a","term_name":"regulation of monocyte chemotaxis","termid":"GO:0090025"},{"relation_name":"negatively_regulates","term_name":"monocyte chemotaxis","termid":"GO:0002548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte chemotaxis","termid":"GO:0090027"}


id: GO:0043270
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"monoatomic ion transport","termid":"GO:0006811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of monoatomic ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of ion transport","type":"narrow"},{"name":"stimulation of ion transport","type":"narrow"},{"name":"up regulation of ion transport","type":"exact"},{"name":"up-regulation of ion transport","type":"exact"},{"name":"upregulation of ion transport","type":"exact"}],"termid":"GO:0043270","terms_by_termid":{"GO:1905665":null}}


id: GO:0047091
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + NADPH + O2 = N(6)-hydroxy-L-lysine + H2O + NADP+.","definition_xrefs":["RHEA:23228","EC:1.14.13.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-lysine 6-monooxygenase (NADPH) activity","secondary_identifiers":["GO:0008739","MetaCyc:1.14.13.59-RXN","KEGG_REACTION:R00448"],"synonyms":[{"name":"L-lysine 6-monooxygenase activity","type":"exact"},{"name":"L-lysine,NADPH:oxygen oxidoreductase (6-hydroxylating)","type":"related"},{"name":"lysine N(6)-hydroxylase activity","type":"related"},{"name":"lysine N6-hydroxylase activity","type":"exact"}],"termid":"GO:0047091"}


id: PBO:0062000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily G member 3","termid":"PBO:0062000"}


id: PBO:0085730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the regulation of endocytosis; transiently recruited to actin cortical patches in a SLA1-dependent manner after late coat component assembly; GFP-fusion protein localizes to the periphery, cytoplasm, bud, and bud neck","termid":"PBO:0085730"}


id: PBO:0035819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_punctate_nuclear_protein_localization","termid":"PBO:0035819"}


id: PBO:0090305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Osh6","termid":"PBO:0090305"}


id: PBO:0071836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 31","termid":"PBO:0071836"}


id: PBO:0113305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in establishment of cell polarity and bud emergence; regulates filamentous-growth mitogen-activated protein kinase (MAPK) pathway; interacts with the Rho1p small GTP-binding protein, the pleckstrin homology (PH) domain of Cdc24p, and with the Rho-type GTPase Cdc42p; stabilizes Cdc42p levels, resulting in elevated fMAPK pathway signaling; involved in maintenance of proper telomere length","termid":"PBO:0113305"}


id: GO:0100065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates leucine import.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of leucine import by transcription from RNA polymerase II promoter (obsolete GO:0100065)","termid":"GO:0100065"}


id: SO:0001793
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read from an end of the clone sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"},{"relation_name":"part_of","term_name":"clone","termid":"SO:0000151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clone_end","synonyms":[{"name":"clone end","type":"exact"}],"termid":"SO:0001793"}


id: PBO:0050184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 1","termid":"PBO:0050184"}


id: PBO:0000702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Srp1 family splicing factor (predicted)","termid":"PBO:0000702"}


id: PBO:0110328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD36 pseudogene 2","termid":"PBO:0110328"}


id: GO:0002565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor genes are diversified through gene conversion.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"},{"relation_name":"is_a","term_name":"somatic cell DNA recombination","termid":"GO:0016444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immune receptors via gene conversion","termid":"GO:0002565"}


id: GO:0010356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E,10E)-geranylgeranyl diphosphate + H+ + homogentisate = 6-geranylgeranyl-2-methylbenzene-1,4-diol + CO2 + diphosphate.","definition_xrefs":["EC:2.5.1.116","GOC:pz","PMID:16989822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogentisate prenyltransferase activity","termid":"GO:0010354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"homogentisate geranylgeranyltransferase activity","secondary_identifiers":["RHEA:38003","MetaCyc:RXN-14929"],"synonyms":[{"name":"homogentisate geranylgeranyl transferase activity","type":"exact"}],"termid":"GO:0010356"}


id: PBO:0048535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8 pseudogene 1","termid":"PBO:0048535"}


id: PBO:0042863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 95","termid":"PBO:0042863"}


id: FYPO:0007515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which RNA stability is decreased during a cellular response to oxidative stress. RNA molecules are more likely to degrade over a given time period than in wild type. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah","PMID:14633985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA stability","termid":"FYPO:0003038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA stability during cellular response to oxidative stress","synonyms":[{"name":"decreased RNA stability during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA stability during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"decreased RNA stability in response to oxidative stress","type":"exact"},{"name":"reduced RNA stability during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007515"}


id: FYPO:0003435
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ornithine carbamoyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal ornithine carbamoyltransferase activity","termid":"FYPO:0003433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0005447","FYPO:0000654","FYPO:0000002","FYPO:0000661"],"is_obsolete":false,"name":"increased ornithine carbamoyltransferase activity","termid":"FYPO:0003435"}


id: PBO:0053413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 351","termid":"PBO:0053413"}


id: GO:0044540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cystine + H2O = pyruvate + NH3 + thiocysteine. Thiocysteine is also known as cysteine persulfide.","definition_xrefs":["RHEA:24927","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"L-cystine L-cysteine-lyase (deaminating)","secondary_identifiers":["EC:4.4.1.35","KEGG_REACTION:R02408","EC:4.4.1.1"],"termid":"GO:0044540"}


id: PR:P23636
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppa2 gene.","definition_xrefs":["UniProtKB:P23636","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major serine/threonine-protein phosphatase PP2A-2 catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.07c","synonyms":[{"name":"Spom972h-ppa2","type":"exact"}],"termid":"PR:P23636"}


id: PR:Q9Y7I3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6C3.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7I3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6C3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.03c","synonyms":[{"name":"Spom972h-SPAC6C3.03c","type":"exact"}],"termid":"PR:Q9Y7I3"}


id: GO:0045963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving dopamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine metabolic process","termid":"GO:0042053"},{"relation_name":"is_a","term_name":"negative regulation of catecholamine metabolic process","termid":"GO:0045914"},{"relation_name":"negatively_regulates","term_name":"dopamine metabolic process","termid":"GO:0042417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dopamine metabolic process","synonyms":[{"name":"down regulation of dopamine metabolic process","type":"exact"},{"name":"down-regulation of dopamine metabolic process","type":"exact"},{"name":"downregulation of dopamine metabolic process","type":"exact"},{"name":"inhibition of dopamine metabolic process","type":"narrow"},{"name":"negative regulation of dopamine metabolism","type":"exact"}],"termid":"GO:0045963"}


id: GO:0048484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gallbladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation.","definition_xrefs":["FMA:66070","GOC:sr","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"autonomic nervous system development","termid":"GO:0048483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enteric nervous system development","termid":"GO:0048484"}


id: PBO:0084719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; associates with respiratory chain supercomplexes III (ubiquinol-cytochrome c reductase) and IV (cytochrome c oxidase); identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0084719"}


id: GO:0047290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-N-acetylneuraminyl-(2->3)-beta-D-galactosyl-(1->3)-N-acetyl-D-galactosaminyl-R + CMP-N-acetyl-beta-neuraminate = alpha-N-acetylneuraminyl-(2->3)-beta-D-galactosyl-(1->3)-[N-acetyl-alpha-neuraminyl-(2->6)]-N-acetyl-D-galactosaminyl-R + CMP.","definition_xrefs":["RHEA:53896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide 6-alpha-sialyltransferase activity","secondary_identifiers":["EC:2.4.3.7","KEGG_REACTION:R04635","Reactome:R-HSA-981809","MetaCyc:2.4.99.7-RXN"],"synonyms":[{"name":"(alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity","type":"exact"},{"name":"NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc-alpha-2,6-sialyltransferase activity","type":"related"},{"name":"ST6GALNAC activity","type":"related"},{"name":"alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate-(alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide-alpha-2,6-sialyltransferase activity","type":"related"},{"name":"sialyltransferase activity","type":"related"}],"termid":"GO:0047290"}


id: PATO:0001227
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits variation or change.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant","synonyms":[{"name":"variable","type":"exact"}],"termid":"PATO:0001227"}


id: GO:1901995
data:
  {"annotated_genes":["SJAG_00145","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"},{"annotations":[91264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiotic cell cycle phase transition.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","PMID:22841721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle phase transition","termid":"GO:1901993"},{"relation_name":"positively_regulates","term_name":"meiotic cell cycle phase transition","termid":"GO:0044771"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of meiotic cell cycle phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell cycle transition","type":"broad"},{"name":"activation of meiotic cell cycle phase transition","type":"narrow"},{"name":"positive regulation of cell cycle transition","type":"broad"},{"name":"up regulation of cell cycle transition","type":"broad"},{"name":"up regulation of meiotic cell cycle phase transition","type":"exact"},{"name":"up-regulation of cell cycle transition","type":"broad"},{"name":"up-regulation of meiotic cell cycle phase transition","type":"exact"},{"name":"upregulation of cell cycle transition","type":"broad"},{"name":"upregulation of meiotic cell cycle phase transition","type":"exact"}],"termid":"GO:1901995","terms_by_termid":{"GO:0110032":null,"GO:1905191":null}}


id: PBO:0056043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor tyrosine kinase","termid":"PBO:0056043"}


id: FYPO:0007036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing phenylglyoxal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on phenylglyoxal","synonyms":[{"name":"normal cell population growth in presence of phenylglyoxal","type":"exact"},{"name":"normal cell population growth on 2-oxo-2-phenylacetaldehyde","type":"exact"},{"name":"normal cell population growth on phenylglyoxal","type":"exact"},{"name":"normal vegetative cell population growth on phenylglyoxal","type":"exact"}],"termid":"FYPO:0007036"}


id: PBO:0067697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 5","termid":"PBO:0067697"}


id: PBO:0036125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_processing_during_vegetative_growth","termid":"PBO:0036125"}


id: GO:0034245
data:
  {"annotated_genes":["SJAG_03014","SJAG_03289"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83548,91238],"is_not":false,"summary":null,"term":"GO:0034245"}]},"cv_name":"cellular_component","definition":"A DNA-directed RNA polymerase complex located in the mitochondrion. Mitochondrial RNA polymerase is composed of two subunits, a catalytic core, which resembles the enzymes from bacteriophage T7 and T3, and a specificity factor required for promoter recognition, which is similar to members of the eubacterial sigma factor family. In S. cerevisiae, these are encoded by the nuclear genes RPO41 and MTF1 and the specificity factor, required for promoter recognition and initiation, is not present in the elongating form.","definition_xrefs":["PMID:7929382","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase complex","termid":"GO:0000428"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03014":null,"SJAG_03289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitochondrial DNA-directed RNA polymerase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial RNA polymerase complex","type":"broad"},{"name":"mitochondrial RNA polymerase holoenzyme complex","type":"exact"}],"termid":"GO:0034245","terms_by_termid":{"GO:0034245":null}}


id: PBO:0055331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2759","termid":"PBO:0055331"}


id: GO:0090646
data:
  {"annotated_genes":["SJAG_04367","SJAG_02302","SJAG_00865","SJAG_00997","SJAG_01704","SJAG_00358","SJAG_04885","SJAG_04113","SJAG_04700","SJAG_02288","SJAG_00255"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83872,105995,113993,79177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[97479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[110337,114683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[90371,113048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[104572,88892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"}]},"cv_name":"biological_process","definition":"The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group, in the mitochondrion.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"mitochondrial RNA processing","termid":"GO:0000963"},{"relation_name":"is_a","term_name":"tRNA processing","termid":"GO:0008033"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00358":null,"SJAG_00865":null,"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02302":null,"SJAG_04113":null,"SJAG_04367":null,"SJAG_04700":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0140053","GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"mitochondrial tRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0090646","terms_by_termid":{"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:1990180":null,"GO:1990799":null}}


id: PBO:0047760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor beta","termid":"PBO:0047760"}


id: GO:0072547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tricoumaroyl spermidine + NADPH + O2 = dicoumaroyl monocaffeoyl spermidine + NADP+ + H2O.","definition_xrefs":["PMID:19779199","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tricoumaroylspermidine meta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11260"],"synonyms":[{"name":"tricoumaroyl spermidine meta-hydroxylase activity","type":"exact"}],"termid":"GO:0072547"}


id: PBO:0030032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_negative_regulation_of_transcription_by_glucose","termid":"PBO:0030032"}


id: GO:0045829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin production","termid":"GO:0002638"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"negative regulation of B cell activation","termid":"GO:0050869"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"negative regulation of isotype switching","synonyms":[{"name":"down regulation of isotype switching","type":"exact"},{"name":"down-regulation of isotype switching","type":"exact"},{"name":"downregulation of isotype switching","type":"exact"},{"name":"inhibition of isotype switching","type":"narrow"},{"name":"negative regulation of class switch recombination","type":"exact"},{"name":"negative regulation of class switching","type":"exact"},{"name":"negative regulation of isotype switch recombination","type":"exact"}],"termid":"GO:0045829"}


id: PBO:0052733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 25","termid":"PBO:0052733"}


id: PBO:0080927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 5","termid":"PBO:0080927"}


id: GO:0045690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of antipodal cell differentiation.","definition_xrefs":["GOC:mtg_plant","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of antipodal cell differentiation","termid":"GO:0045688"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"antipodal cell differentiation","termid":"GO:0009557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antipodal cell differentiation","synonyms":[{"name":"activation of antipodal cell differentiation","type":"narrow"},{"name":"stimulation of antipodal cell differentiation","type":"narrow"},{"name":"up regulation of antipodal cell differentiation","type":"exact"},{"name":"up-regulation of antipodal cell differentiation","type":"exact"},{"name":"upregulation of antipodal cell differentiation","type":"exact"}],"termid":"GO:0045690"}


id: PBO:0084515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; homologous to worm F33D4.7/EMC-6, fly CG11781, human TMEM93","termid":"PBO:0084515"}


id: PBO:0058432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4802","termid":"PBO:0058432"}


id: GO:0031329
data:
  {"annotated_genes":["SJAG_00457","SJAG_00169","SJAG_04249","SJAG_04502","SJAG_02723","SJAG_03851","SJAG_05289","SJAG_05000","SJAG_00704","SJAG_00824","SJAG_04232","SJAG_00004","SJAG_02433","SJAG_01509","SJAG_02765","SJAG_01184","SJAG_04435","SJAG_05346","SJAG_01716","SJAG_04496","SJAG_04655","SJAG_03371"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114431,105359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010507"},{"annotations":[102742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"},{"annotations":[104659,104748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[93732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[105775,103495,110671,95544,107940,94978,107052,90279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010508"},{"annotations":[67902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"},{"annotations":[102343,94118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[85641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"},{"annotations":[94664,113889,67553,71630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010506"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"cellular catabolic process","termid":"GO:0044248"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00169":null,"SJAG_00457":null,"SJAG_00704":null,"SJAG_00824":null,"SJAG_01184":null,"SJAG_01509":null,"SJAG_01716":null,"SJAG_02433":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_03371":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04249":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05000":null,"SJAG_05289":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"regulation of cellular catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cellular breakdown","type":"exact"},{"name":"regulation of cellular catabolism","type":"exact"},{"name":"regulation of cellular degradation","type":"exact"}],"termid":"GO:0031329","terms_by_termid":{"GO:0010506":null,"GO:0010507":null,"GO:0010508":null,"GO:0016239":null,"GO:0016242":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null,"GO:2000786":null}}


id: PBO:0086251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that negatively regulates mitotic exit; forms a complex with Kel1p and Bud14p that regulates Bnr1p (formin) to affect actin cable assembly, cytokinesis, and polarized growth; functions in a complex with Kel1p, interacts with Tem1p and Lte1p; localizes to regions of polarized growth; potential Cdc28p substrate","termid":"PBO:0086251"}


id: PBO:0081070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 3","termid":"PBO:0081070"}


id: GO:0052128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive energy taxis","termid":"GO:0052128"}


id: PATO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located far (not close to) in space in relation to another entity.","definition_xrefs":["PATOC:PM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"far from","synonyms":[{"name":"distant from","type":"exact"},{"name":"remote from","type":"exact"}],"termid":"PATO:0002233"}


id: PBO:0079491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNDC11 antisense RNA 1","termid":"PBO:0079491"}


id: GO:0005068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a transmembrane receptor protein tyrosine kinase and one or more other molecules, permitting them to function in a coordinated way.","definition_xrefs":["PMID:10502414","GOC:mtg_MIT_16mar07","PMID:20565848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor complex adaptor activity","termid":"GO:0030159"},{"relation_name":"is_a","term_name":"receptor tyrosine kinase binding","termid":"GO:0030971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"transmembrane receptor protein tyrosine kinase adaptor activity","secondary_identifiers":["GO:0005069"],"synonyms":[{"name":"transmembrane receptor protein tyrosine kinase adaptor protein activity","type":"exact"},{"name":"transmembrane receptor protein tyrosine kinase docking protein activity","type":"related"}],"termid":"GO:0005068"}


id: GO:0050003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dCMP = 2'-deoxy-5-methyl-5'-cytidylate + 7,8-dihydrofolate.","definition_xrefs":["EC:2.1.1.54","RHEA:11568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"deoxycytidylate C-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01670","MetaCyc:DEOXYCYTIDYLATE-C-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:dCMP C-methyltransferase activity","type":"related"},{"name":"dCMP methyltransferase activity","type":"related"},{"name":"deoxycytidylate methyltransferase activity","type":"related"}],"termid":"GO:0050003"}


id: GO:0034669
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha4 subunit and one beta7 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"integrin alpha4-beta7 complex","synonyms":[{"name":"ITGA4-ITGB7 complex","type":"narrow"},{"name":"alpha4-beta7 integrin complex","type":"exact"}],"termid":"GO:0034669"}


id: GO:0034810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,5-dihydroxybenzo(a)pyrene + O2 = 4,5-chrysenedicarboxylate.","definition_xrefs":["UM-BBD_reactionID:r1128"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,5-dihydroxybenzo(a)pyrene dioxygenase activity (obsolete GO:0034810)","termid":"GO:0034810"}


id: PBO:0077610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 1","termid":"PBO:0077610"}


id: GO:0098941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from presynapse to postynapse, across the synaptic cleft, mediated by a trans-synaptic protein complex.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde trans-synaptic signaling","termid":"GO:0098916"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by trans-synaptic complex","termid":"GO:0099545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"anterograde trans-synaptic signaling by trans-synaptic protein complex","termid":"GO:0098941"}


id: GO:0004408
data:
  {"annotated_genes":["SJAG_03199","SJAG_04008"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90546,103576],"is_not":false,"summary":null,"term":"GO:0004408"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: holocytochrome c = apocytochrome c + heme.","definition_xrefs":["EC:4.4.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"holocytochrome-c synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HOLOCYTOCHROME-C-SYNTHASE-RXN","RHEA:22648"],"synonyms":[{"name":"cytochrome c heme-lyase activity","type":"related"},{"name":"cytochrome c synthase activity","type":"related"},{"name":"holocytochrome c synthetase activity","type":"related"},{"name":"holocytochrome-c apocytochrome-c-lyase (heme-forming)","type":"related"},{"name":"holocytochrome-c apocytochrome-c-lyase activity","type":"related"}],"termid":"GO:0004408","terms_by_termid":{"GO:0004408":null}}


id: GO:1905291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CAMKK-AMPK signaling cascade.","definition_xrefs":["GO_REF:0000058","PMID:22128786","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium-mediated signaling","termid":"GO:0050850"},{"relation_name":"is_a","term_name":"regulation of CAMKK-AMPK signaling cascade","termid":"GO:1905289"},{"relation_name":"positively_regulates","term_name":"CAMKK-AMPK signaling cascade","termid":"GO:0061762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of CAMKK-AMPK signaling cascade","synonyms":[{"name":"activation of CAMKK-AMPK signaling cascade","type":"narrow"},{"name":"activation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"positive regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"up regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"up regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"up-regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"up-regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"upregulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"upregulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:1905291"}


id: GO:0030711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of border cell delamination.","definition_xrefs":["PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of border follicle cell delamination","termid":"GO:0030710"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"border follicle cell delamination","termid":"GO:0030709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of border follicle cell delamination","synonyms":[{"name":"activation of border follicle cell delamination","type":"narrow"},{"name":"positive regulation of border cell delamination","type":"broad"},{"name":"stimulation of border follicle cell delamination","type":"narrow"},{"name":"up regulation of border follicle cell delamination","type":"exact"},{"name":"up-regulation of border follicle cell delamination","type":"exact"},{"name":"upregulation of border follicle cell delamination","type":"exact"}],"termid":"GO:0030711"}


id: GO:0140860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (3R,4R)-4,2'-dihydroxyisoflavan + NADP+ = a (3R)-2'-hydroxyisoflavanone + H+ + NADPH.","definition_xrefs":["PMID:7625843","RHEA:56284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(3R)-2'-hydroxyisoflavanone reductase activity","synonyms":[{"name":"vestitone reductase activity","type":"narrow"}],"termid":"GO:0140860"}


id: PBO:0081344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 146","termid":"PBO:0081344"}


id: GO:0002903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"negatively_regulates","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell apoptotic process","synonyms":[{"name":"down regulation of B cell apoptosis","type":"exact"},{"name":"down-regulation of B cell apoptosis","type":"exact"},{"name":"downregulation of B cell apoptosis","type":"exact"},{"name":"inhibition of B cell apoptosis","type":"narrow"},{"name":"negative regulation of B cell apoptosis","type":"narrow"}],"termid":"GO:0002903"}


id: PBO:0069921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1213, pseudogene","termid":"PBO:0069921"}


id: PBO:0082872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cortical ER protein involved in ER-plasma membrane (PM) tethering; one of 6 proteins (Ist2, Scs2, Scs22, Tcb1, Tcb2, Tcb3) that connect ER to PM, regulate PM phosphatidylinositol-4-phosphate (PI4P) levels by controlling access of Sac1 phosphatase to PI4P; required to locate Osh6, Osh7 in ER/PM contact site to allow phosphatidylserine transport from ER to PM; localizes to mother in small-budded cells, to bud in medium-, large-budded cells; mRNA transported to bud tip by actomyosin-driven process","termid":"PBO:0082872"}


id: PR:O14214
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA methyltransferase 10 homolog A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01012","PANTHER:PTHR13563:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(9)-N1)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.09","secondary_identifiers":["UniProtKB:O14214"],"synonyms":[{"name":"Spom972h-TRMT10A","type":"exact"},{"name":"tRNA methyltransferase 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1G9)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1G9)MTase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14214"}


id: GO:2000375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oxygen metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of oxygen metabolic process","termid":"GO:2000374"},{"relation_name":"negatively_regulates","term_name":"oxygen metabolic process","termid":"GO:0072592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxygen metabolic process","synonyms":[{"name":"negative regulation of diatomic oxygen metabolic process","type":"exact"},{"name":"negative regulation of oxygen metabolism","type":"exact"}],"termid":"GO:2000375"}


id: PBO:0055388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2818","termid":"PBO:0055388"}


id: PBO:0084993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent medium chain alcohol dehydrogenase; has broad substrate specificity; member of the cinnamyl family of alcohol dehydrogenases; may be involved in fusel alcohol synthesis or in aldehyde tolerance; protein abundance increases in response to DNA replication stress","termid":"PBO:0084993"}


id: GO:0140868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3 H+ + 15-cis-4,4'-diapophytoene + 3 FAD = 4,4'-diapolycopene + 3 FADH2. This reaction consists of three successive dehydrogenations that lead to the introduction of three double bonds into 4,4'-diapophytoene (dehydrosqualene), with 4,4'-diapophytofluene and 4,4'-diapo-zeta-carotene as intermediates, and 4,4'-diaponeurosporene (the major deep-yellow pigment in staphylococci strains) as the end product.","definition_xrefs":["PMID:15933032"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,4'-diapophytoene desaturase (4,4'-diapolycopene-forming) (obsolete GO:0140868)","synonyms":[{"name":"4,4'-diapophytoene desaturase activity","type":"broad"}],"termid":"GO:0140868"}


id: PBO:0060578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 14","termid":"PBO:0060578"}


id: GO:0050509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP.","definition_xrefs":["EC:2.4.1.225","MetaCyc:2.4.1.225-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9036285","Reactome:R-HSA-3656257","Reactome:R-HSA-2076392","RHEA:20908","Reactome:R-HSA-2022856","Reactome:R-HSA-9036289","Reactome:R-HSA-3656267"],"synonyms":[{"name":"N-acetylglucosaminyl-proteoglycan 4-b-glucuronosyltransferase activity","type":"exact"},{"name":"N-acetylglucosaminylproteoglycan beta-1,4-glucuronyltransferase activity","type":"related"},{"name":"UDP-alpha-D-glucuronate:N-acetyl-alpha-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-proteoglycan 4-beta-glucuronosyltransferase activity","type":"related"},{"name":"heparan glucuronyltransferase II activity","type":"related"}],"termid":"GO:0050509"}


id: GO:0097390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 12 (CXCL12) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 12 production","synonyms":[{"name":"CXCL12 production","type":"exact"}],"termid":"GO:0097390"}


id: PBO:0036062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_centromere_during_vegetative_growth","termid":"PBO:0036062"}


id: GO:0043913
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A trimeric protein complex which in E. coli is composed of the subunits MreB, MreC and MreD. The complex directs longitudinal cell wall synthesis, maintaining cell morphology.","definition_xrefs":["GOC:jl","PMID:15612918"],"gene_count":0,"genotype_count":0,"name":"obsolete chromosome segregation-directing complex (obsolete GO:0043913)","synonyms":[{"name":"MreBCD complex","type":"narrow"},{"name":"chromosome segregation directing complex","type":"exact"},{"name":"longitudinal peptidoglycan synthesis-directing complex","type":"exact"}],"termid":"GO:0043913"}


id: GO:2000411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell migration","termid":"GO:2000405"},{"relation_name":"is_a","term_name":"regulation of thymocyte migration","termid":"GO:2000410"},{"relation_name":"negatively_regulates","term_name":"thymocyte migration","termid":"GO:0072679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thymocyte migration","synonyms":[{"name":"negative regulation of immature T cell migration","type":"related"},{"name":"negative regulation of immature T lymphocyte migration","type":"related"},{"name":"negative regulation of immature T-cell migration","type":"related"},{"name":"negative regulation of immature T-lymphocyte migration","type":"related"},{"name":"negative regulation of thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000411"}


id: PBO:0110164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA wybutosine biosynthesis protein Tyw1","termid":"PBO:0110164"}


id: PBO:0075433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member B1","termid":"PBO:0075433"}


id: PBO:0066486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 3","termid":"PBO:0066486"}


id: GO:1990211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the jasmonic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:16553894","GOC:ml","PMID:14617079"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of jasmonic acid levels in host (obsolete GO:1990211)","termid":"GO:1990211"}


id: PATO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition not to invade surrounding tissues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, non-invasive","termid":"PATO:0002132"}


id: GO:0035661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like 2 receptor where the MyD88 adaptor molecule mediates transduction of the signal. Toll-like 2 receptors are pattern recognition receptors that bind microbial pattern motifs to initiate an innate immune response.","definition_xrefs":["GOC:BHF","PMID:20385024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0002755"},{"relation_name":"is_a","term_name":"toll-like receptor 2 signaling pathway","termid":"GO:0034134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"MyD88-dependent toll-like receptor 2 signaling pathway","synonyms":[{"name":"MyD88-dependent TLR2 signaling pathway","type":"exact"},{"name":"MyD88-dependent toll-like receptor 2 signalling pathway","type":"exact"}],"termid":"GO:0035661"}


id: SO:1000088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant causing a change in primary translation product of a transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000088 sequence_variant_affecting_translational_product (obsolete SO:1000088)","synonyms":[{"name":"mutation affecting translational product","type":"related"},{"name":"mutation causing partially characterised change of translational product","type":"related"},{"name":"mutation causing uncharacterised change of translational product","type":"related"},{"name":"sequence variant affecting translational product","type":"exact"},{"name":"sequence variant causing partially characterised change of translational product","type":"exact"},{"name":"sequence variant causing uncharacterised change of translational product","type":"exact"},{"name":"sequence_variant_causing_partially_characterised_change_of_translational_product","type":"exact"},{"name":"sequence_variant_causing_uncharacterised_change_of_translational_product","type":"exact"}],"termid":"SO:1000088"}


id: PBO:0087660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of SEAC, a coatomer-related complex that associates dynamically with the vacuole; Npr3p may have a structural or regulatory role, supporting Iml1p function as a GAP for the Rag family GTPase Gtr1p, and leading to inhibition of TORC1 signaling in response to amino acid deprivation; SEACIT is required for non-nitrogen-starvation-induced autophagy; null mutant has meiotic defects; human NPRL3 homolog","termid":"PBO:0087660"}


id: PBO:0067596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 759, pseudogene","termid":"PBO:0067596"}


id: GO:0141160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of host phagosomes.","definition_xrefs":["PMID:21412437","PMID:15487949","PMID:30057173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host phagosome","termid":"GO:0141160"}


id: GO:0035662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like 4 protein, a pattern recognition receptor that binds bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["PMID:18304834","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Toll-like receptor binding","termid":"GO:0035325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"Toll-like receptor 4 binding","synonyms":[{"name":"TLR4 binding","type":"exact"}],"termid":"GO:0035662"}


id: PBO:0053656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 709","termid":"PBO:0053656"}


id: MOD:01724
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01724"}


id: _global:interaction_genotype_b
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_genotype_b","termid":"_global:interaction_genotype_b"}


id: MOD:00603
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 283 is redundant with Unimod 280. Remap to MOD:00600","definition_xrefs":["Unimod:283"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00603 N-ethylation (obsolete MOD:00603)","termid":"MOD:00603"}


id: PR:O13944
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An oxysterol-binding protein-related protein 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol-binding protein homolog C23H4.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.01c","secondary_identifiers":["UniProtKB:O13944"],"synonyms":[{"name":"Spom972h-OSBPL11","type":"exact"}],"termid":"PR:O13944"}


id: GO:2000433
data:
  {"annotated_genes":["SJAG_04597","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86117,90517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytokinesis, actomyosin contractile ring assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokinesis","termid":"GO:0032467"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"regulation of cytokinesis, actomyosin contractile ring assembly","termid":"GO:2000431"},{"relation_name":"positively_regulates","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007049","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"positive regulation of cytokinesis, actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of contractile ring assembly","type":"exact"}],"termid":"GO:2000433","terms_by_termid":{"GO:1903501":null}}


id: PBO:0083924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fructose 1,6-bisphosphate aldolase; required for glycolysis and gluconeogenesis; catalyzes conversion of fructose 1,6 bisphosphate to glyceraldehyde-3-P and dihydroxyacetone-P; locates to mitochondrial outer surface upon oxidative stress; N-terminally propionylated in vivo","termid":"PBO:0083924"}


id: PBO:0073706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI8 subunit of superkiller complex","termid":"PBO:0073706"}


id: GO:0085013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a type VII secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type VII secretion system (obsolete GO:0085013)","termid":"GO:0085013"}


id: PR:A9ZLL8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsd90 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A9ZLL8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein lsd90 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.16c","synonyms":[{"name":"90kDa large and small daughter protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsd90","type":"exact"}],"termid":"PR:A9ZLL8"}


id: PBO:0005128
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.37","termid":"PBO:0005128"}


id: GO:0097086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whereby a relatively unspecialized cell acquires specialized features of an amniotic stem cell. An amniotic stem cell is a mesenchymal stem cell extracted from amniotic fluid. Amniotic stem cells are able to differentiate into various tissue types such as skin, cartilage, cardiac tissue, nerves, muscle, and bone.","definition_xrefs":["PMID:20942606","GOC:yaf","CL:0002639","Wikipedia:Amniotic_stem_cells"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation","termid":"GO:0072497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amniotic stem cell differentiation","termid":"GO:0097086"}


id: PBO:0046840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 13","termid":"PBO:0046840"}


id: GO:0045651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of macrophage differentiation","termid":"GO:0045649"},{"relation_name":"positively_regulates","term_name":"macrophage differentiation","termid":"GO:0030225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage differentiation","synonyms":[{"name":"activation of macrophage differentiation","type":"narrow"},{"name":"stimulation of macrophage differentiation","type":"narrow"},{"name":"up regulation of macrophage differentiation","type":"exact"},{"name":"up-regulation of macrophage differentiation","type":"exact"},{"name":"upregulation of macrophage differentiation","type":"exact"}],"termid":"GO:0045651"}


id: PBO:0026939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiosis_I","termid":"PBO:0026939"}


id: PBO:0056666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 4","termid":"PBO:0056666"}


id: PBO:0083040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta subunit of the oligosaccharyl transferase glycoprotein complex; complex is required for N-linked glycosylation of proteins in the endoplasmic reticulum","termid":"PBO:0083040"}


id: GO:0102968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6E)-8-hydroxygeranial + NADP = (6E)-8-oxogeranial + NADPH + H+.","definition_xrefs":["RHEA:32611","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"10-hydroxygeranial oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-9369"],"termid":"GO:0102968"}


id: PBO:0045957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFLAM antisense RNA 4","termid":"PBO:0045957"}


id: PBO:0063409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 5","termid":"PBO:0063409"}


id: PBO:0080946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 1 pseudogene 1","termid":"PBO:0080946"}


id: GO:0060353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell adhesion molecule production","termid":"GO:0060353"}


id: PBO:0048219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric cancer associated transcript 3","termid":"PBO:0048219"}


id: PBO:0041772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 11","termid":"PBO:0041772"}


id: PBO:0051819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 4","termid":"PBO:0051819"}


id: _global:assayed_enzyme
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a catalytic activity phenotype and an enzyme, usually a gene product, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_enzyme","termid":"_global:assayed_enzyme"}


id: PBO:0029657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0029657"}


id: PR:Q09799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein KRI1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00289","PANTHER:PTHR14490:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kri1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.05","secondary_identifiers":["UniProtKB:Q09799"],"synonyms":[{"name":"Spom972h-KRI1","type":"exact"}],"termid":"PR:Q09799"}


id: PR:O94603
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- epe1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain-containing histone demethylation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.16c","synonyms":[{"name":"Spom972h-epe1","type":"exact"},{"name":"[Histone-H3]-lysine-36 demethylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heterochromatin-destabilizing protein epe1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94603"}


id: GO:1902341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a xylitol across a membrane. Xylitol is a polyalcohol (pentane-1,2,3,4,5-pentol), produced by hydrogenation of xylose.","definition_xrefs":["GOC:TermGenie","PMID:23475614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"xylitol transmembrane transport","synonyms":[{"name":"xylitol transport","type":"broad"}],"termid":"GO:1902341"}


id: RO:0002104
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between a cell c and a protein complex or protein p if and only if that cell has as part a plasma_membrane[GO:0005886], and that plasma membrane has p as part.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_plasma_membrane_part","termid":"RO:0002104"}


id: GO:1905689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of diacylglycerol kinase activity.","definition_xrefs":["GOC:PARL","GOC:bc","PMID:23091060","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid kinase activity","termid":"GO:0090218"},{"relation_name":"is_a","term_name":"regulation of diacylglycerol kinase activity","termid":"GO:1905687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of diacylglycerol kinase activity","synonyms":[{"name":"activation of 1,2-diacylglycerol kinase (phosphorylating)","type":"narrow"},{"name":"activation of 1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"activation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"activation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"activation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"activation of DG kinase activity","type":"narrow"},{"name":"activation of DGK activity","type":"narrow"},{"name":"activation of arachidonoyl-specific diacylglycerol kinase activity","type":"narrow"},{"name":"activation of diacylglycerol kinase activity","type":"narrow"},{"name":"activation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"activation of diglyceride kinase activity","type":"narrow"},{"name":"activation of sn-1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"positive regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"positive regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"positive regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"positive regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"positive regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"positive regulation of DG kinase activity","type":"exact"},{"name":"positive regulation of DGK activity","type":"exact"},{"name":"positive regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"positive regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"positive regulation of diglyceride kinase activity","type":"exact"},{"name":"positive regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"up regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"up regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"up regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"up regulation of DG kinase activity","type":"exact"},{"name":"up regulation of DGK activity","type":"exact"},{"name":"up regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"up regulation of diglyceride kinase activity","type":"exact"},{"name":"up regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"up-regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"up-regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"up-regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"up-regulation of DG kinase activity","type":"exact"},{"name":"up-regulation of DGK activity","type":"exact"},{"name":"up-regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"up-regulation of diglyceride kinase activity","type":"exact"},{"name":"up-regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"upregulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"upregulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"upregulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"upregulation of DG kinase activity","type":"exact"},{"name":"upregulation of DGK activity","type":"exact"},{"name":"upregulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"upregulation of diglyceride kinase activity","type":"exact"},{"name":"upregulation of sn-1,2-diacylglycerol kinase activity","type":"exact"}],"termid":"GO:1905689"}


id: PBO:0087300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sirtuin, histone H3 deacetylase; involved along with Hst4p in telomeric silencing, cell cycle progression, radiation resistance, genomic stability and short-chain fatty acid metabolism; member of the Sir2 family of NAD(+)-dependent protein deacetylases","termid":"PBO:0087300"}


id: PBO:0087772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing 90S preribosome complex; complex is involved in production of 18S rRNA and assembly of small ribosomal subunit; Utp30p is peripherally associated with 90S preribosome and appears partially redundant with its paralog Cic1p","termid":"PBO:0087772"}


id: PBO:0064246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D family member 5","termid":"PBO:0064246"}


id: GO:0004859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid.","definition_xrefs":["GOC:ai","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase inhibitor activity","termid":"GO:0055102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674","GO:0140678","GO:0004857"],"is_obsolete":false,"name":"phospholipase inhibitor activity","termid":"GO:0004859"}


id: SO:0001983
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a premature start codon is introduced, moved or lost.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_premature_start_codon_variant","synonyms":[{"name":"5' UTR premature start codon variant","type":"exact"}],"termid":"SO:0001983"}


id: PBO:0087384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol regulatory element binding protein; induces sterol biosynthetic genes, upon sterol depletion; acts as a sterol sensor, binding ergosterol in sterol rich conditions; relocates from intracellular membranes to perinuclear foci upon sterol depletion; redundant activator of filamentation with ECM22, up-regulating the expression of filamentous growth genes; contains a Zn[2]-Cys[6] binuclear cluster; UPC2 has a paralog, ECM22, that arose from the whole genome duplication","termid":"PBO:0087384"}


id: PBO:0027407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nonsense-mediated_decay","termid":"PBO:0027407"}


id: PBO:0090312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ddx27/Drs1","termid":"PBO:0090312"}


id: PBO:0042429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 37, HSP90 cochaperone","termid":"PBO:0042429"}


id: PBO:0050253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 31","termid":"PBO:0050253"}


id: GO:1990639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-myo-inositol 3,4,5-trisphosphate + H2O = myo-inositol 3,4-bisphosphate + phosphate.","definition_xrefs":["PMID:11348594"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol-3,4,5-trisphosphate 5-phosphatase activity (obsolete GO:1990639)","synonyms":[{"name":"inositol-3,4,5-trisphosphate 5-phosphatase activity","type":"exact"}],"termid":"GO:1990639"}


id: GO:0015769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of melibiose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Melibiose is the disaccharide 6-O-alpha-D-galactopyranosyl-D-glucose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"melibiose transport","termid":"GO:0015769"}


id: GO:0015838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of betaine, the N-trimethyl derivative of an amino acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transport","termid":"GO:0015697"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"amino-acid betaine transport","synonyms":[{"name":"betaine transport","type":"exact"}],"termid":"GO:0015838"}


id: PBO:0004681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor complex subunit Spt4","termid":"PBO:0004681"}


id: PBO:0001177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-tRNA ligase (predicted)","termid":"PBO:0001177"}


id: GO:0033421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CCU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"CCU codon-amino acid adaptor activity","synonyms":[{"name":"CCT codon-amino acid adaptor activity","type":"exact"},{"name":"proline tRNA","type":"related"}],"termid":"GO:0033421"}


id: GO:1904030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["GOC:als","GO_REF:0000059","GOC:TermGenie","PMID:22995177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"regulation of cyclin-dependent protein kinase activity","termid":"GO:1904029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of cyclin-dependent protein kinase activity","synonyms":[{"name":"down regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"down-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"downregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"inhibition of cyclin-dependent protein kinase activity","type":"exact"}],"termid":"GO:1904030"}


id: PBO:0075130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein U11/U12 subunit 35","termid":"PBO:0075130"}


id: FYPO:0007683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which components of the actin fusion focus are more widely distributed along the shmoo tip than normal.","definition_xrefs":["PomBase:mah","PMID:28410370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton","termid":"FYPO:0005665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0004803"],"is_obsolete":false,"name":"wide actin fusion focus","synonyms":[{"name":"increased actin fusion focus diameter","type":"exact"},{"name":"increased actin fusion focus width","type":"exact"},{"name":"wider actin fusion focus","type":"exact"}],"termid":"FYPO:0007683"}


id: GO:0010900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of phosphatidylcholine catabolism. Phosphatidylcholine catabolic processes are the chemical reactions and pathways resulting in the breakdown of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine catabolic process","termid":"GO:0010899"},{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"negative regulation of phosphatidylcholine metabolic process","termid":"GO:0150174"},{"relation_name":"negatively_regulates","term_name":"phosphatidylcholine catabolic process","termid":"GO:0034638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"negative regulation of phosphatidylcholine catabolic process","termid":"GO:0010900"}


id: PBO:0063377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDGFA associated protein 1","termid":"PBO:0063377"}


id: FYPO:0001585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to cell tip during vegetative growth","synonyms":[{"name":"abolished protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell end during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"protein localization to cell tip abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001585"}


id: PR:Q9UT51
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csn3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.16c","synonyms":[{"name":"CSN complex subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SGN3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-csn3","type":"exact"}],"termid":"PR:Q9UT51"}


id: GO:1905276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial tube formation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bhm","PMID:25745997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"epithelial tube formation","termid":"GO:0072175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial tube formation","termid":"GO:1905276"}


id: PBO:0076056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin like 2","termid":"PBO:0076056"}


id: PBO:0070338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 10","termid":"PBO:0070338"}


id: PBO:0063775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 2","termid":"PBO:0063775"}


id: GO:0071194
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the Kv channel interacting protein KChIP3 associated with the channel via interaction with the Kv alpha subunit 4.2.","definition_xrefs":["PMID:15356203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Kv4.2-KChIP3 channel complex","secondary_identifiers":["CORUM:608"],"termid":"GO:0071194"}


id: PR:O42699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1902 gene.","definition_xrefs":["UniProtKB:O42699","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L19-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.14","synonyms":[{"name":"Spom972h-rpl1902","type":"exact"}],"termid":"PR:O42699"}


id: GO:0102944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose(2-) + medicagenate = UDP(3-) + a medicagenate monoglucoside.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete medicagenate UDP-glucosyltransferase activity (obsolete GO:0102944)","termid":"GO:0102944"}


id: FYPO:0004353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein phosphorylation during mitotic S phase","synonyms":[{"name":"increased protein phosphorylation during mitotic S phase during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during mitotic S-phase","type":"exact"},{"name":"increased protein/peptide phosphorylation during mitotic S phase","type":"exact"}],"termid":"FYPO:0004353"}


id: PBO:0072048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 18","termid":"PBO:0072048"}


id: FYPO:0001330
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115596,115598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115599,115597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004695"},{"annotations":[115206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002227"},{"annotations":[115584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115337,115339,115338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001327"},{"annotations":[115583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004574"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell is higher than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"},{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01956":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_03689":null},"genotype_count":7,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03118"],"name":"increased level of substance in cell during vegetative growth","references_by_uniquename":{"PMID:23786411":null,"PMID:25318672":null,"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_00426","SJAG_01956","SJAG_03351","SJAG_03689"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","dcr1delta"],"synonyms":[{"name":"increased accumulation of substance in cell during vegetative growth","type":"related"},{"name":"increased level of substance in cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001330","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0001327":null,"FYPO:0002227":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004695":null,"FYPO:0004982":null}}


id: PBO:0077828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3 family member G, pseudogene","termid":"PBO:0077828"}


id: PBO:0061443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 2 group F member 2","termid":"PBO:0061443"}


id: GO:1903641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gastrin-induced gastric acid secretion.","definition_xrefs":["GOC:TermGenie","PMID:11123201","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gastric acid secretion","termid":"GO:0060454"},{"relation_name":"is_a","term_name":"regulation of gastrin-induced gastric acid secretion","termid":"GO:1903639"},{"relation_name":"positively_regulates","term_name":"gastrin-induced gastric acid secretion","termid":"GO:0001698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of gastrin-induced gastric acid secretion","synonyms":[{"name":"activation of gastrin-induced gastric acid secretion","type":"narrow"},{"name":"up regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"up-regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"upregulation of gastrin-induced gastric acid secretion","type":"exact"}],"termid":"GO:1903641"}


id: FYPO:0007722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of nucleosome-dependent ATPase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome-dependent ATPase activity","termid":"FYPO:0005519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased nucleosome-dependent ATPase activity","synonyms":[{"name":"reduced nucleosome-dependent ATPase activity","type":"exact"}],"termid":"FYPO:0007722"}


id: GO:0048334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell differentiation","termid":"GO:1905770"},{"relation_name":"is_a","term_name":"regulation of cell fate determination","termid":"GO:1905933"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"mesodermal cell fate determination","termid":"GO:0007500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"}


id: PBO:0048055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 4","termid":"PBO:0048055"}


id: GO:0032344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving aldosterone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"regulates","term_name":"aldosterone metabolic process","termid":"GO:0032341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of aldosterone metabolic process","synonyms":[{"name":"regulation of aldosterone metabolism","type":"exact"}],"termid":"GO:0032344"}


id: PBO:0002586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR20 family, Bun62","termid":"PBO:0002586"}


id: FYPO:0004332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation begins later than normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein degradation during mitosis","synonyms":[{"name":"delayed onset of protein breakdown during mitosis","type":"exact"},{"name":"delayed onset of protein catabolic process during mitosis","type":"exact"},{"name":"delayed onset of protein catabolism during mitosis","type":"exact"},{"name":"delayed onset of protein degradation during mitosis during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein degradation during mitosis during vegetative growth","type":"exact"},{"name":"delayed onset of protein degradation during mitotic M phase","type":"related"},{"name":"delayed onset of protein degradation during mitotic nuclear division","type":"exact"},{"name":"delayed protein degradation during mitosis","type":"exact"}],"termid":"FYPO:0004332"}


id: GO:0035471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by luteinizing hormone binding to a receptor, where the activated receptor signals via downstream effectors that contribute to progression of the ovarian follicle over time, from its formation to the mature structure.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"luteinizing hormone signaling pathway","termid":"GO:0042700"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"luteinizing hormone signaling pathway involved in ovarian follicle development","synonyms":[{"name":"luteinizing hormone signalling pathway involved in ovarian follicle development","type":"exact"}],"termid":"GO:0035471"}


id: MOD:01278
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:253#K","PubMed:11283024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crotonaldehyde","termid":"MOD:00576"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crotonaldehyde - site K","synonyms":[{"name":"Crotonaldehyde","type":"related"}],"termid":"MOD:01278"}


id: GO:0016864
data:
  {"annotated_genes":["SJAG_02301","SJAG_03414","SJAG_00131","SJAG_00288","SJAG_04046","SJAG_04904"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106076,111948,88409,84750,87002,96873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003756"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor are the same molecule, one or more sulfur-sulfur bonds in the molecule are rearranged, and no oxidized product appears.","definition_xrefs":["EC:5.3.4.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00131":null,"SJAG_00288":null,"SJAG_02301":null,"SJAG_03414":null,"SJAG_04046":null,"SJAG_04904":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, transposing S-S bonds","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intramolecular isomerase activity, transposing S-S bonds","type":"exact"}],"termid":"GO:0016864","terms_by_termid":{"GO:0003756":null}}


id: GO:0045284
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A membrane-bound flavoenzyme complex consisting of four subunits, A, B, C, and D. A and B comprise the membrane-extrinsic catalytic domain and C (InterPro:IPR003510; InterPro:IPR00224) and D (InterPro:IPR003418) link the catalytic centers to the electron-transport chain. In some species, the complex has only three subunits, and in these cases, there is only one membrane anchor instead of two. This family consists of the 13 kDa hydrophobic subunit D. This component may be required to anchor the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. Fumarate reductase couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, in a reaction opposite to that catalyzed by the related complex II of the respiratory chain (succinate dehydrogenase-(ubiquinone)). Examples of this component are found in bacterial species.","definition_xrefs":["GOC:mtg_sensu","InterPro:IPR004224","InterPro:IPR003418"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane fumarate reductase complex (obsolete GO:0045284)","synonyms":[{"name":"fumarate reductase complex","type":"broad"}],"termid":"GO:0045284"}


id: PR:P87235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp42 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp42 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.10c","synonyms":[{"name":"Spom972h-rhp42","type":"exact"}],"termid":"PR:P87235"}


id: PBO:0087658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HOPS and the CORVET complexes; part of the Class C Vps complex essential for membrane docking and fusion at Golgi-to-endosome and endosome-to-vacuole protein transport stages","termid":"PBO:0087658"}


id: FYPO:0006868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is decreased during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex","termid":"FYPO:0006867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell cortex during meiotic prophase I","synonyms":[{"name":"decreased protein localisation to cell cortex during meiotic prophase I","type":"exact"},{"name":"decreased protein localization to cell cortex during prophase I","type":"exact"},{"name":"decreased protein localization to cell cortex during prophase of meiosis I","type":"exact"},{"name":"decreased protein localization to cell cortex in zygote","type":"related"},{"name":"reduced protein localization to cell cortex during meiotic prophase I","type":"exact"}],"termid":"FYPO:0006868"}


id: GO:0120249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lateral wall of an outer hair cell (OHC) is a unique trilaminate composite consisting of the plasma membrane, an underlying cytoskeletal network containing an actin-spectrin cortical lattice, and an adjacent system of circumferential lamellar organelles known as the subsurface cisternae.","definition_xrefs":["GOC:krc","PMID:9412485","PMID:31920560","PMID:26352669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral wall of outer hair cell","synonyms":[{"name":"OHC lateral wall","type":"related"},{"name":"lateral wall of OHC","type":"related"},{"name":"outer hair cell lateral wall","type":"exact"}],"termid":"GO:0120249"}


id: PBO:0033803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_DNA_double-strand_break","termid":"PBO:0033803"}


id: PR:O94595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.05","synonyms":[{"name":"Spom972h-SPCC622.05","type":"exact"}],"termid":"PR:O94595"}


id: GO:0072028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nephron are generated and organized. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron morphogenesis","termid":"GO:0072028"}


id: PBO:0038847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 16","termid":"PBO:0038847"}


id: PR:O94268
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nop2 gene.","definition_xrefs":["UniProtKB:O94268","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"25S rRNA (cytosine-C(5))-methyltransferase nop2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.20c","synonyms":[{"name":"Spom972h-nop2","type":"exact"},{"name":"nucleolar protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94268"}


id: SO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop_gained (SO:0001587) variant that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_gained","termid":"SO:0001587"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_gained_NMD_triggering","synonyms":[{"name":"stop gained variant-nonsense-mediated decay triggering","type":"exact"},{"name":"stop gained-NMD triggering","type":"exact"}],"termid":"SO:0002321"}


id: MOD:00532
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:12845591","Unimod:171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shimadzu 13CNBS","synonyms":[{"name":"NBS:13C(6)","type":"related"},{"name":"Shimadzu NBS-13C","type":"related"}],"termid":"MOD:00532"}


id: PBO:0001225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein (predicted)","termid":"PBO:0001225"}


id: PBO:0086457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metallo-dependent hydrolase superfamily protein; similar to AMP deaminases but lacks key catalytic residues and does not rescue purine nucleotide metabolic defect of quadruple aah1 ade8 amd1 his1 mutant; may regulate purine nucleotide homeostasis as overexpression in an AMD1 strain grown in adenine results in greatly reduced GDP and GTP intracellular levels; not an essential gene; YJL070C has a paralog, YBR284W, that arose from the whole genome duplication","termid":"PBO:0086457"}


id: PBO:0045103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 1 associated protein 1","termid":"PBO:0045103"}


id: PBO:0034814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol-serine O-phosphatidyltransferase Pps1","termid":"PBO:0034814"}


id: FYPO:0000173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the DNA replication checkpoint in a mitotic cell cycle is abnormal. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"},{"relation_name":"is_a","term_name":"abnormal mitotic DNA integrity checkpoint","termid":"FYPO:0000643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"abnormal mitotic cell cycle DNA replication checkpoint","secondary_identifiers":["FYPO:0000823"],"synonyms":[{"name":"abnormal DNA replication checkpoint","type":"broad"},{"name":"abnormal mitotic cell cycle DNA replication checkpoint activation","type":"exact"}],"termid":"FYPO:0000173"}


id: PBO:0036116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_actin_filament-based_movement","termid":"PBO:0036116"}


id: PR:Q9P6M8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- crp79 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6M8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor crp79 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1610.03c","synonyms":[{"name":"PABP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-crp79","type":"exact"},{"name":"meiotic expression up-regulated protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"poly(A)-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polyadenylate-binding protein crp79 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6M8"}


id: PBO:0085157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide binding alpha subunit of the heterotrimeric G protein; interacts with the receptor Gpr1p, has signaling role in response to nutrients; required for the recruitment of Ras-GTP at the plasma membrane and in the nucleus","termid":"PBO:0085157"}


id: PBO:0062496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily C member 1 pseudogene","termid":"PBO:0062496"}


id: PBO:0044909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA fragmentation factor subunit alpha","termid":"PBO:0044909"}


id: PBO:0067136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 184, pseudogene","termid":"PBO:0067136"}


id: PBO:0077667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 13B","termid":"PBO:0077667"}


id: PBO:0057588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 892a","termid":"PBO:0057588"}


id: GO:0060013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reflex process in which an animal immediately tries to turn over after being placed in a supine position.","definition_xrefs":["GOC:dph","PMID:8635460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"righting reflex","synonyms":[{"name":"righting response","type":"exact"}],"termid":"GO:0060013"}


id: PBO:0043338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN8 transmembrane ER and ERGIC protein","termid":"PBO:0043338"}


id: PBO:0047541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7","termid":"PBO:0047541"}


id: GO:0071350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-15 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-15","termid":"GO:0070672"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-15","synonyms":[{"name":"cellular response to IL-15","type":"exact"}],"termid":"GO:0071350"}


id: PBO:0082870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coronin; cortical actin cytoskeletal component that associates with the Arp2p/Arp3p complex to regulate its activity; plays a role in regulation of actin patch assembly","termid":"PBO:0082870"}


id: GO:0031775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lutropin-choriogonadotropic hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"lutropin-choriogonadotropic hormone receptor binding","synonyms":[{"name":"lutropin-choriogonadotropic hormone receptor ligand","type":"narrow"}],"termid":"GO:0031775"}


id: PBO:0080921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene","termid":"PBO:0080921"}


id: PR:O14177
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 2a that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01120","PANTHER:PTHR10476:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT-III complex subunit did4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.01","secondary_identifiers":["UniProtKB:O14177"],"synonyms":[{"name":"Spom972h-CHMP2A","type":"exact"},{"name":"vacuolar protein-sorting-associated protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14177"}


id: GO:1900856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of fumitremorgin B biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of fumitremorgin B biosynthetic process (obsolete GO:1900856)","synonyms":[{"name":"down regulation of fumitremorgin B biosynthetic process","type":"exact"},{"name":"down-regulation of fumitremorgin B biosynthetic process","type":"exact"},{"name":"downregulation of fumitremorgin B biosynthetic process","type":"exact"}],"termid":"GO:1900856"}


id: SO:0001415
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point within a chromosome where a deletion begins or ends.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion_breakpoint","synonyms":[{"name":"deletion breakpoint","type":"exact"}],"termid":"SO:0001415"}


id: FYPO:0005852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the biotinylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"},{"relation_name":"is_a","term_name":"abnormal protein biotinylation during vegetative growth","termid":"FYPO:0005851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein biotinylation during vegetative growth","synonyms":[{"name":"decreased protein biotinylation during mitotic cell cycle","type":"related"},{"name":"reduced protein biotinylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005852"}


id: PBO:0005540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase/inositol-1,4- bisphosphate 1-phosphatase","termid":"PBO:0005540"}


id: PBO:0038921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G3","termid":"PBO:0038921"}


id: GO:0008420
data:
  {"annotated_genes":["SJAG_03126","SJAG_03624","SJAG_02389","SJAG_02203","SJAG_01286"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87705,89746,93309],"is_not":false,"summary":null,"term":"GO:0008420"},{"annotations":[91945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180007"},{"annotations":[108063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat--phospho-L-serine/threonine (consensus YSPTSPS) + H2O = RNA polymerase II large subunit + phosphate.","definition_xrefs":["PMID:22622228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase activity","termid":"GO:0004722"},{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat modifying activity","termid":"GO:0140994"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01286":null,"SJAG_02203":null,"SJAG_02389":null,"SJAG_03126":null,"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787","GO:0140096","GO:0004721"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CTD phosphatase activity","type":"exact"},{"name":"RNA polymerase II carboxy-terminal domain phosphatase activity","type":"exact"}],"termid":"GO:0008420","terms_by_termid":{"GO:0008420":null,"GO:0180005":null,"GO:0180007":null}}


id: PBO:0053060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LASP1 neighbor","termid":"PBO:0053060"}


id: PBO:0002540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2H2 type zinc finger protein/UBA domain protein","termid":"PBO:0002540"}


id: GO:0016910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SAP kinase 3 activity (obsolete GO:0016910)","synonyms":[{"name":"SAP kinase 3 activity","type":"exact"},{"name":"SAPK3","type":"exact"}],"termid":"GO:0016910"}


id: GO:0004707
data:
  {"annotated_genes":["SJAG_02592","SJAG_04551","SJAG_02923"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90486,92488,98256],"is_not":false,"summary":null,"term":"GO:0004707"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein + ATP = protein phosphate + ADP. This reaction is the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli.","definition_xrefs":["ISBN:0198547684","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02923":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0004672","GO:0003824","GO:0140096","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"MAP kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-445079","Reactome:R-HSA-111898","GO:0008339","GO:0016908","KEGG_REACTION:R00162","Reactome:R-HSA-5654562","Reactome:R-HSA-5654565","GO:0008338","Reactome:R-HSA-9626832","MetaCyc:2.7.11.24-RXN","Reactome:R-HSA-73722","Reactome:R-HSA-451366","Reactome:R-HSA-5654560","EC:2.7.11.24","Reactome:R-HSA-5654566","Reactome:R-HSA-198733","GO:0016909"],"synonyms":[{"name":"ATP:protein phosphotransferase (MAPKK-activated) activity","type":"related"},{"name":"ERK","type":"related"},{"name":"ERK1","type":"exact"},{"name":"ERK2","type":"related"},{"name":"MAP kinase 1 activity","type":"narrow"},{"name":"MAP kinase 2 activity","type":"narrow"},{"name":"MAPK","type":"related"},{"name":"MBP kinase I activity","type":"narrow"},{"name":"MBP kinase II activity","type":"narrow"},{"name":"SAP kinase activity","type":"narrow"},{"name":"SAPK","type":"narrow"},{"name":"extracellular signal-regulated kinase activity","type":"narrow"},{"name":"mitogen activated kinase activity","type":"exact"},{"name":"mitogen-activated protein kinase activity","type":"related"},{"name":"myelin basic protein kinase activity","type":"narrow"},{"name":"stress-activated kinase activity","type":"narrow"},{"name":"stress-activated protein kinase activity","type":"narrow"}],"termid":"GO:0004707","terms_by_termid":{"GO:0004707":null}}


id: FYPO:0009039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of potassium chloride than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to potassium chloride","synonyms":[{"name":"resistance to potassium chloride during mitotic cell cycle","type":"related"},{"name":"resistance to potassium chloride during vegetative growth","type":"exact"},{"name":"resistant to potassium chloride","type":"exact"}],"termid":"FYPO:0009039"}


id: GO:0035653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a macromolecular complex between proteins of the AP-1 adaptor complex and proteins and/or lipoproteins that are going to be transported by a clathrin-coated vesicle. The AP-1 adaptor protein complex is a component of the cytoplasmic coat found on clathrin-coated vesicles, and binds to sorting signals of cargo to facilitate their trafficking.","definition_xrefs":["GOC:lb","PMID:16162817","PMID:12802059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle cargo loading","termid":"GO:0035652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"clathrin-coated vesicle cargo loading, AP-1-mediated","synonyms":[{"name":"cargo loading into clathrin-coated vesicle, AP-1-mediated","type":"exact"}],"termid":"GO:0035653"}


id: GO:0061754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the quantity of fibrinogen circulating in the bloodstream.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:rph","PMID:20570858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circulating fibrinogen levels","termid":"GO:0044537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circulating fibrinogen levels","termid":"GO:0061754"}


id: GO:1902868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retina development in camera-type eye.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:mr","PMID:16872597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of retina development in camera-type eye","termid":"GO:1902866"},{"relation_name":"positively_regulates","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of retina development in camera-type eye","synonyms":[{"name":"activation of retina development in camera-style eye","type":"narrow"},{"name":"activation of retina development in camera-type eye","type":"narrow"},{"name":"activation of retinal development","type":"related"},{"name":"positive regulation of retina development in camera-style eye","type":"exact"},{"name":"positive regulation of retinal development","type":"related"},{"name":"up regulation of retina development in camera-style eye","type":"exact"},{"name":"up regulation of retina development in camera-type eye","type":"exact"},{"name":"up regulation of retinal development","type":"related"},{"name":"up-regulation of retina development in camera-style eye","type":"exact"},{"name":"up-regulation of retina development in camera-type eye","type":"exact"},{"name":"up-regulation of retinal development","type":"related"},{"name":"upregulation of retina development in camera-style eye","type":"exact"},{"name":"upregulation of retina development in camera-type eye","type":"exact"},{"name":"upregulation of retinal development","type":"related"}],"termid":"GO:1902868"}


id: PBO:0044477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 20 subfamily A member 1","termid":"PBO:0044477"}


id: GO:0072414
data:
  {"annotated_genes":["SJAG_00082","SJAG_04140","SJAG_01837","SJAG_04332","SJAG_03048","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86119,98487,107294,112776,89908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[86124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072479"},{"annotations":[98499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[90651,98500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072455","GO:0072473"],"synonyms":[{"name":"mitotic G2/M transition checkpoint effector process","type":"related"},{"name":"mitotic cell cycle G1/S checkpoint effector process","type":"related"},{"name":"mitotic cell cycle checkpoint effector process","type":"exact"},{"name":"response to mitotic G2/M transition checkpoint signal","type":"related"},{"name":"response to mitotic cell cycle G1/S checkpoint signaling","type":"related"},{"name":"response to signal involved in mitotic G2/M transition checkpoint","type":"related"},{"name":"response to signal involved in mitotic cell cycle G1/S checkpoint","type":"related"},{"name":"response to signal involved in mitotic cell cycle checkpoint","type":"related"}],"termid":"GO:0072414","terms_by_termid":{"GO:0072435":null,"GO:0072479":null,"GO:0140429":null,"GO:1990820":null}}


id: SO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide modified by methylation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated_DNA_base_feature","synonyms":[{"name":"methylated base feature","type":"exact"}],"termid":"SO:0000306"}


id: GO:1903011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bone development.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:22510437","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of bone development","termid":"GO:1903010"},{"relation_name":"negatively_regulates","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone development","synonyms":[{"name":"down regulation of bone development","type":"exact"},{"name":"down-regulation of bone development","type":"exact"},{"name":"downregulation of bone development","type":"exact"},{"name":"inhibition of bone development","type":"narrow"}],"termid":"GO:1903011"}


