# terms

id: GO:1905569
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90164],"is_not":false,"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ferrichrome biosynthetic process.","definition_xrefs":["PMID:654321","GO_REF:0000058","GOC:TermGenie","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of siderophore biosynthetic process","termid":"GO:1900705"},{"relation_name":"is_a","term_name":"regulation of ferrichrome biosynthetic process","termid":"GO:1905568"},{"relation_name":"negatively_regulates","term_name":"ferrichrome biosynthetic process","termid":"GO:0031169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ferrichrome biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of ferrichrome anabolism","type":"exact"},{"name":"down regulation of ferrichrome biosynthesis","type":"exact"},{"name":"down regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"down regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"down regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"down regulation of ferrichrome formation","type":"exact"},{"name":"down regulation of ferrichrome synthesis","type":"exact"},{"name":"down-regulation of ferrichrome anabolism","type":"exact"},{"name":"down-regulation of ferrichrome biosynthesis","type":"exact"},{"name":"down-regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"down-regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"down-regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"down-regulation of ferrichrome formation","type":"exact"},{"name":"down-regulation of ferrichrome synthesis","type":"exact"},{"name":"downregulation of ferrichrome anabolism","type":"exact"},{"name":"downregulation of ferrichrome biosynthesis","type":"exact"},{"name":"downregulation of ferrichrome biosynthetic process","type":"exact"},{"name":"downregulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"downregulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"downregulation of ferrichrome formation","type":"exact"},{"name":"downregulation of ferrichrome synthesis","type":"exact"},{"name":"inhibition of ferrichrome anabolism","type":"narrow"},{"name":"inhibition of ferrichrome biosynthesis","type":"narrow"},{"name":"inhibition of ferrichrome biosynthetic process","type":"narrow"},{"name":"inhibition of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"inhibition of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"inhibition of ferrichrome formation","type":"narrow"},{"name":"inhibition of ferrichrome synthesis","type":"narrow"},{"name":"negative regulation of ferrichrome anabolism","type":"exact"},{"name":"negative regulation of ferrichrome biosynthesis","type":"exact"},{"name":"negative regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"negative regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"negative regulation of ferrichrome formation","type":"exact"},{"name":"negative regulation of ferrichrome synthesis","type":"exact"}],"termid":"GO:1905569","terms_by_termid":{"GO:1905569":null}}


id: PR:C6Y4A3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4A3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit K, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.10c","synonyms":[{"name":"Spom972h-atp19","type":"exact"}],"termid":"PR:C6Y4A3"}


id: GO:0071971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an extracellular vesicular exosome, a membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Exosomes are defined by their size, which generally ranges from 30 nm to 100 nm.","definition_xrefs":["GOC:tfm","PMID:19442504","GOC:mah","PMID:27462458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"extracellular exosome biogenesis","termid":"GO:0097734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"extracellular exosome assembly","synonyms":[{"name":"extracellular vesicular exosome assembly","type":"exact"}],"termid":"GO:0071971"}


id: GO:0005643
data:
  {"annotated_genes":["SJAG_03281","SJAG_03300","SJAG_03103","SJAG_00375","SJAG_00471","SJAG_04148","SJAG_03986","SJAG_01833","SJAG_00521","SJAG_04721","SJAG_03907","SJAG_01460","SJAG_02274","SJAG_03299","SJAG_01909","SJAG_01065","SJAG_00641","SJAG_03847","SJAG_03449","SJAG_03836","SJAG_00840","SJAG_01584","SJAG_00962","SJAG_04379","SJAG_00093","SJAG_02661","SJAG_05243","SJAG_02210","SJAG_03795","SJAG_01358","SJAG_04284","SJAG_02424","SJAG_00298","SJAG_02757","SJAG_01834","SJAG_03200","SJAG_02520","SJAG_02425","SJAG_03729","SJAG_01293","SJAG_01013","SJAG_04472","SJAG_03182","SJAG_00178","SJAG_01185","SJAG_03593","SJAG_01374","SJAG_04645","SJAG_02094","SJAG_04017"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83508,85122,85130,85536,85948,86245,87054,87182,87815,88024,89532,90089,91079,92231,94049,96512,97250,98063,99093,99561,99709,99768,100045,101138,101461,101824,102236,103864,103868,104786,105686,105953,106519,107843,109347,109628,110979,111079,111595,112133,112511,112556,113465,115317,115347,115348,115424,115454,115455,115456,115460],"is_not":false,"summary":null,"term":"GO:0005643"},{"annotations":[85546,87816,97490,90090,91080,102237],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044613"},{"annotations":[90091,85131,99094,104787],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044614"},{"annotations":[96513,97251,112557],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044611"},{"annotations":[99095],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044612"},{"annotations":[110980,111631,112512,85123,87817,91081],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044615"},{"annotations":[109348,87055,94050,85132,105954,85537,87971,102658,106520,101462],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031080"},{"annotations":[103869,86246,115573],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070762"}]},"cv_name":"cellular_component","definition":"A protein complex providing a discrete opening in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00521":null,"SJAG_00641":null,"SJAG_00840":null,"SJAG_00962":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01185":null,"SJAG_01293":null,"SJAG_01358":null,"SJAG_01374":null,"SJAG_01460":null,"SJAG_01584":null,"SJAG_01833":null,"SJAG_01834":null,"SJAG_01909":null,"SJAG_02094":null,"SJAG_02210":null,"SJAG_02274":null,"SJAG_02424":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02661":null,"SJAG_02757":null,"SJAG_03103":null,"SJAG_03182":null,"SJAG_03200":null,"SJAG_03281":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03449":null,"SJAG_03593":null,"SJAG_03729":null,"SJAG_03795":null,"SJAG_03836":null,"SJAG_03847":null,"SJAG_03907":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04148":null,"SJAG_04284":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04645":null,"SJAG_04721":null,"SJAG_05243":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nuclear pore","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21733045":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:32109380":null,"PMID:33495454":null},"secondary_identifiers":["NIF_Subcellular:sao220861693","Wikipedia:Nuclear_pore","GO:0005644"],"synonyms":[{"name":"NPC","type":"exact"},{"name":"nuclear pore complex","type":"exact"},{"name":"nuclear pore membrane protein","type":"narrow"},{"name":"nucleopore","type":"exact"}],"termid":"GO:0005643","terms_by_termid":{"GO:0005643":null,"GO:0031080":null,"GO:0044611":null,"GO:0044612":null,"GO:0044613":null,"GO:0044614":null,"GO:0044615":null,"GO:0070762":null}}


id: GO:0003682
data:
  {"annotated_genes":["SJAG_03441","SJAG_05239","SJAG_02815","SJAG_03387","SJAG_00914","SJAG_00618","SJAG_00783","SJAG_00164","SJAG_00698","SJAG_01878","SJAG_03698","SJAG_00585","SJAG_03997","SJAG_03689","SJAG_04407","SJAG_02165","SJAG_04210","SJAG_01938","SJAG_02698","SJAG_01067","SJAG_04586","SJAG_03449","SJAG_00925","SJAG_02401","SJAG_02563","SJAG_03832","SJAG_05192","SJAG_03945","SJAG_01046","SJAG_03418","SJAG_03128","SJAG_01010","SJAG_01146","SJAG_00942","SJAG_03460","SJAG_00481","SJAG_02773","SJAG_03982","SJAG_03927","SJAG_02416","SJAG_04879","SJAG_03635","SJAG_04917","SJAG_04512","SJAG_03354","SJAG_04670","SJAG_00471","SJAG_02990","SJAG_03926","SJAG_00935","SJAG_02314","SJAG_00728","SJAG_00440","SJAG_00584","SJAG_04183","SJAG_00863","SJAG_00641","SJAG_00311","SJAG_03905","SJAG_00327","SJAG_00913","SJAG_00768","SJAG_02348","SJAG_01823","SJAG_03787","SJAG_04205","SJAG_01610","SJAG_01745","SJAG_00170","SJAG_03944","SJAG_04038","SJAG_05333","SJAG_03694","SJAG_01653","SJAG_00861","SJAG_01827","SJAG_00796"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85202,85235,85249,85710,86191,86558,86754,86871,87034,87454,88699,90071,90721,92352,92909,93498,93545,95066,95253,97177,97603,100267,101103,102905,103080,103924,103938,104202,104249,105764,106708,107850,108537,108986,109162,109488,110218,111374,111682,111745,112385,112625,112962,112997,113149],"is_not":false,"summary":null,"term":"GO:0003682"},{"annotations":[91640,110493,103094,106045,107219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031490"},{"annotations":[95678,103018,111451,105232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043035"},{"annotations":[112086,101469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990188"},{"annotations":[99673,104879,107370,109404,109711,111495,113352,99337,104874,88479,93204,99014,90190,103979,106046,92270,106324,113208,113107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031491"},{"annotations":[107981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140585"},{"annotations":[99338,87521,90191,102994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990841"}]},"cv_name":"molecular_function","definition":"Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.","definition_xrefs":["GOC:jl","PMID:20404130","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":77,"genes_by_uniquename":{"SJAG_00164":null,"SJAG_00170":null,"SJAG_00311":null,"SJAG_00327":null,"SJAG_00440":null,"SJAG_00471":null,"SJAG_00481":null,"SJAG_00584":null,"SJAG_00585":null,"SJAG_00618":null,"SJAG_00641":null,"SJAG_00698":null,"SJAG_00728":null,"SJAG_00768":null,"SJAG_00783":null,"SJAG_00796":null,"SJAG_00861":null,"SJAG_00863":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00935":null,"SJAG_00942":null,"SJAG_01010":null,"SJAG_01046":null,"SJAG_01067":null,"SJAG_01146":null,"SJAG_01610":null,"SJAG_01653":null,"SJAG_01745":null,"SJAG_01823":null,"SJAG_01827":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02165":null,"SJAG_02314":null,"SJAG_02348":null,"SJAG_02401":null,"SJAG_02416":null,"SJAG_02563":null,"SJAG_02698":null,"SJAG_02773":null,"SJAG_02815":null,"SJAG_02990":null,"SJAG_03128":null,"SJAG_03354":null,"SJAG_03387":null,"SJAG_03418":null,"SJAG_03441":null,"SJAG_03449":null,"SJAG_03460":null,"SJAG_03635":null,"SJAG_03689":null,"SJAG_03694":null,"SJAG_03698":null,"SJAG_03787":null,"SJAG_03832":null,"SJAG_03905":null,"SJAG_03926":null,"SJAG_03927":null,"SJAG_03944":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04038":null,"SJAG_04183":null,"SJAG_04205":null,"SJAG_04210":null,"SJAG_04407":null,"SJAG_04512":null,"SJAG_04586":null,"SJAG_04670":null,"SJAG_04879":null,"SJAG_04917":null,"SJAG_05192":null,"SJAG_05239":null,"SJAG_05333":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chromatin binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lamin/chromatin binding","type":"narrow"},{"name":"microtubule/chromatin interaction","type":"narrow"},{"name":"nuclear membrane vesicle binding to chromatin","type":"narrow"}],"termid":"GO:0003682","terms_by_termid":{"GO:0003682":null,"GO:0031490":null,"GO:0031491":null,"GO:0043035":null,"GO:0140585":null,"GO:1990188":null,"GO:1990841":null}}


id: GO:0000414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 36 of histone H3.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K36 methylation (obsolete GO:0000414)","termid":"GO:0000414"}


id: PBO:0080737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing E3 ubiquitin protein ligase 1 pseudogene 1","termid":"PBO:0080737"}


id: GO:0102133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4R)-limonene + O2 + NADH + H+ = (4R)-perillyl alcohol + NAD + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"limonene hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11493"],"termid":"GO:0102133"}


id: PBO:0088731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-specific gamma-glutamylcyclotransferase Ggg1","termid":"PBO:0088731"}


id: PBO:0049195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRID1 antisense RNA 1","termid":"PBO:0049195"}


id: PBO:0004711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit (predicted)","termid":"PBO:0004711"}


id: GO:0031765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 galanin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galanin receptor binding","termid":"GO:0031763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 2 galanin receptor binding","synonyms":[{"name":"type 2 galanin receptor ligand","type":"narrow"}],"termid":"GO:0031765"}


id: PBO:0088029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiB family mitochondrial protein; involved in mobilization of CoQ from its site of synthesis on the inner mitochondrial membrane to other sites of action; contains transmembrane domain and mitochondrial targeting sequence","termid":"PBO:0088029"}


id: PBO:0060840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament heavy pseudogene 1","termid":"PBO:0060840"}


id: PBO:0039891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 45","termid":"PBO:0039891"}


id: PBO:0041723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase ID","termid":"PBO:0041723"}


id: GO:0046089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"},{"relation_name":"is_a","term_name":"cytosine metabolic process","termid":"GO:0019858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"cytosine biosynthetic process","synonyms":[{"name":"cytosine anabolism","type":"exact"},{"name":"cytosine biosynthesis","type":"exact"},{"name":"cytosine formation","type":"exact"},{"name":"cytosine synthesis","type":"exact"}],"termid":"GO:0046089"}


id: PBO:0077073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIA1 cytotoxic granule associated RNA binding protein","termid":"PBO:0077073"}


id: PBO:0055167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2589","termid":"PBO:0055167"}


id: PBO:0064571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popeye domain containing 3","termid":"PBO:0064571"}


id: PBO:0076836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 3","termid":"PBO:0076836"}


id: PBO:0086570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YPL261C is not an essential gene; partially overlaps verified ORF YPL260W","termid":"PBO:0086570"}


id: PBO:0047862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(2)(q13)","termid":"PBO:0047862"}


id: GO:0007545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sex determination processes that take place after the initial transmission of the sexual phenotype to specific information pathways.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"processes downstream of sex determination signal","termid":"GO:0007545"}


id: PBO:0060609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 2 like","termid":"PBO:0060609"}


id: GO:0009415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to water","synonyms":[{"name":"response to water stimulus","type":"exact"}],"termid":"GO:0009415"}


id: GO:0001082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase I transcription factor, which may be a single protein or a complex, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase I transcription factor binding (obsolete GO:0001082)","synonyms":[{"name":"RNA polymerase I transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0001082"}


id: MOD:01524
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex 116 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-116 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01524"}


id: MOD:00617
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 3x(2)H labeled residue methyl ester.","definition_xrefs":["OMSSA:21","Unimod:298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3x(2)H residue methyl ester","synonyms":[{"name":"Methyl:2H(3)","type":"related"},{"name":"ctermpeptrideuteromethyl","type":"exact"},{"name":"deuterated methyl ester","type":"related"}],"termid":"MOD:00617"}


id: PBO:0002999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formamidase-like protein (predicted)","termid":"PBO:0002999"}


id: PBO:0042507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 1","termid":"PBO:0042507"}


id: PBO:0079953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 6","termid":"PBO:0079953"}


id: GO:0015420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: vitamin B12(out) + ATP + H2O = ADP + an vitamin B12(in) + H+ + phosphate. Vitamin B12 is alkylcob(III)alamin.","definition_xrefs":["GOC:pz","RHEA:17873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type vitamin B12 transporter activity","secondary_identifiers":["GO:0015235","Reactome:R-HSA-3095901","GO:0102023","Reactome:R-HSA-5223313","Reactome:R-HSA-9759206","EC:7.6.2.8","Reactome:R-HSA-5683325","MetaCyc:3.6.3.33-RXN"],"synonyms":[{"name":"ATP-dependent cobalamin transmembrane transporter activity","type":"related"},{"name":"ATP-dependent vitamin B12 transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled cobalamin transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled vitamin B12 transmembrane transporter activity","type":"related"},{"name":"cobalamin ABC transporter","type":"exact"},{"name":"cobalamin porter activity","type":"broad"},{"name":"cobalamin transporter activity","type":"broad"},{"name":"cobalamin-transporting ATPase activity","type":"related"},{"name":"vitamin B12 ABC transporter activity","type":"exact"},{"name":"vitamin B12 porter activity","type":"broad"},{"name":"vitamin B12 transporter activity","type":"broad"},{"name":"vitamin B12-transporting ATPase activity","type":"broad"}],"termid":"GO:0015420"}


id: SO:0000991
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA located in the genome and able to be transmitted to the offspring.","definition_xrefs":["BCS:etrwz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA","termid":"SO:0000352"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomic_DNA","synonyms":[{"name":"gDNA","type":"exact"},{"name":"genomic DNA","type":"exact"}],"termid":"SO:0000991"}


id: PBO:0051108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-45","termid":"PBO:0051108"}


id: PBO:0040810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD cargo adaptor 1 pseudogene 1","termid":"PBO:0040810"}


id: GO:1904101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acadesine stimulus.","definition_xrefs":["PMID:20802119","GO_REF:0000071","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acadesine","termid":"GO:1904101"}


id: MOD:00999
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00404. Remap to MOD:00404.","definition_xrefs":["DeltaMass:90"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00999 homoseryl lactone (obsolete MOD:00999)","termid":"MOD:00999"}


id: GO:0042443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenylethylamine, an amine with pharmacological properties similar to those of amphetamine, occurs naturally as a neurotransmitter in the brain, and is present in chocolate and oil of bitter almonds.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenylethylamine metabolic process","synonyms":[{"name":"phenylethylamine metabolism","type":"exact"}],"termid":"GO:0042443"}


id: GO:0005985
data:
  {"annotated_genes":["SJAG_04301"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving sucrose, the disaccharide fructofuranosyl-glucopyranoside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"sucrose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sucrose metabolism","type":"exact"}],"termid":"GO:0005985","terms_by_termid":{"GO:0005987":null}}


id: PBO:0044822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109E (pseudogene)","termid":"PBO:0044822"}


id: GO:0097031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex I, a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex I biogenesis (obsolete GO:0097031)","termid":"GO:0097031"}


id: PBO:0059384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 9","termid":"PBO:0059384"}


id: GO:0006900
data:
  {"annotated_genes":["SJAG_03558","SJAG_02349","SJAG_00072","SJAG_00416","SJAG_04391","SJAG_03268","SJAG_00284","SJAG_02539","SJAG_05345","SJAG_01516","SJAG_03153","SJAG_03907","SJAG_04643","SJAG_05344","SJAG_01748","SJAG_01242","SJAG_05207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84094,99837,102109,102653,110968],"is_not":false,"summary":null,"term":"GO:0006900"},{"annotations":[89317,113814],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[91624],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"},{"annotations":[102660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090114"},{"annotations":[70321,112691,89455,74133,106303,108074,108814],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090110"},{"annotations":[94818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048194"}]},"cv_name":"biological_process","definition":"The evagination of a membrane, resulting in formation of a vesicle.","definition_xrefs":["GOC:tb","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00416":null,"SJAG_01242":null,"SJAG_01516":null,"SJAG_01748":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03268":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_04391":null,"SJAG_04643":null,"SJAG_05207":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vesicle budding from membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006902","GO:1902591"],"synonyms":[{"name":"membrane evagination","type":"exact"},{"name":"nonselective vesicle assembly","type":"related"},{"name":"single organism membrane budding","type":"related"},{"name":"single-organism membrane budding","type":"related"},{"name":"vesicle biosynthesis","type":"exact"},{"name":"vesicle budding","type":"related"},{"name":"vesicle formation","type":"exact"}],"termid":"GO:0006900","terms_by_termid":{"GO:0006900":null,"GO:0048194":null,"GO:0048205":null,"GO:0048208":null,"GO:0090110":null,"GO:0090114":null}}


id: PBO:0057377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548as","termid":"PBO:0057377"}


id: PBO:0000961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATPase (predicted)","termid":"PBO:0000961"}


id: PBO:0050282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme oxygenase 2","termid":"PBO:0050282"}


id: GO:0014017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will differentiate into a neuroblast.","definition_xrefs":["GOC:ef","ISBN:0878932585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"neuroblast differentiation","termid":"GO:0014016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast fate commitment","termid":"GO:0014017"}


id: GO:1902384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycyrrhetinate.","definition_xrefs":["GOC:TermGenie","PMID:22128119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycyrrhetinate metabolic process","synonyms":[{"name":"glycyrrhetinate metabolism","type":"exact"}],"termid":"GO:1902384"}


id: PBO:0028982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_mitotic_spindle_elongation","termid":"PBO:0028982"}


id: PBO:0041933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 1","termid":"PBO:0041933"}


id: GO:0009987
data:
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