# terms

id: PBO:0051843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRS4 antisense RNA 1","termid":"PBO:0051843"}


id: PR:O14324
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane emp24 domain-containing protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C16E9.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.09c","secondary_identifiers":["UniProtKB:O14324"],"synonyms":[{"name":"Spom972h-TMED4","type":"exact"}],"termid":"PR:O14324"}


id: PR:Q09672
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-methyl-2-oxobutanoate hydroxymethyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00057","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-oxobutanoate hydroxymethyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.09c","secondary_identifiers":["UniProtKB:Q09672"],"synonyms":[{"name":"Spom972h-panB","type":"exact"},{"name":"ketopantoate hydroxymethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09672"}


id: GO:2001115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a methanopterin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methanopterin-containing compound metabolic process","synonyms":[{"name":"methanopterin metabolism","type":"exact"}],"termid":"GO:2001115"}


id: GO:0045896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription during mitotic cell cycle (obsolete GO:0045896)","synonyms":[{"name":"mitotic regulation of transcription","type":"exact"},{"name":"regulation of transcription, mitotic","type":"exact"}],"termid":"GO:0045896"}


id: FYPO:0005272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule plus-end directed mitotic chromosome migration does not occur. In microtubule plus-end directed mitotic chromosome migration, chromosomes that are laterally attached to one or more mitotic spindle microtubules migrate towards the spindle equator via plus-end-directed movement along the microtubules.","definition_xrefs":["GO:0099606","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule plus-end directed mitotic chromosome migration","termid":"FYPO:0005271"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000337","FYPO:0001985","FYPO:0000138","FYPO:0000641"],"is_obsolete":false,"name":"abolished microtubule plus-end directed mitotic chromosome migration","synonyms":[{"name":"abolished microtubule plus-end directed chromosome migration during mitosis","type":"exact"},{"name":"abolished microtubule plus-end directed mitotic chromosome migration during vegetative growth","type":"exact"},{"name":"abolished microtubule plus-end-directed mitotic chromosome migration","type":"exact"},{"name":"abolished plus-end directed chromosome gliding","type":"exact"},{"name":"microtubule plus-end directed mitotic chromosome migration abolished","type":"exact"}],"termid":"FYPO:0005272"}


id: PBO:0086261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates phospholipid asymmetry at plasma membrane; may act to generate normal levels of PI4P; may act together with or upstream of Stt4p; at least partially mediates proper localization of Stt4p to the plasma membrane","termid":"PBO:0086261"}


id: PBO:0074407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM11 pseudogene 1","termid":"PBO:0074407"}


id: PR:O14330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16E9.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E9.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.15","synonyms":[{"name":"Spom972h-SPBC16E9.15","type":"exact"}],"termid":"PR:O14330"}


id: PBO:0017601
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OxySterol binding protein Homolog","termid":"PBO:0017601"}


id: FYPO:0003376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to nitrogen starvation. Cells go on to grow and divide to a greater extent than wild type following nitrogen starvation.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to nitrogen starvation","synonyms":[{"name":"increased cell population growth during cellular response to nitrogen starvation","type":"exact"},{"name":"increased growth during cellular response to nitrogen starvation","type":"exact"},{"name":"resistance to nitrogen depletion","type":"exact"},{"name":"resistance to nitrogen deprivation","type":"exact"},{"name":"resistance to nitrogen starvation during mitotic cell cycle","type":"related"},{"name":"resistance to nitrogen starvation during vegetative growth","type":"exact"},{"name":"resistant to nitrogen starvation","type":"exact"}],"termid":"FYPO:0003376"}


id: PBO:0076370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 7, pseudogene","termid":"PBO:0076370"}


id: GO:0002648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of central tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of central tolerance induction","termid":"GO:0002646"},{"relation_name":"positively_regulates","term_name":"central tolerance induction","termid":"GO:0002508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of central tolerance induction","synonyms":[{"name":"activation of central tolerance induction","type":"narrow"},{"name":"stimulation of central tolerance induction","type":"narrow"},{"name":"up regulation of central tolerance induction","type":"exact"},{"name":"up-regulation of central tolerance induction","type":"exact"},{"name":"upregulation of central tolerance induction","type":"exact"}],"termid":"GO:0002648"}


id: PBO:0085242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; potential role in the secretory pathway; CPR8 has a paralog, CPR4, that arose from the whole genome duplication","termid":"PBO:0085242"}


id: PBO:0084087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor for the GTPase Gtr1p; subunit of the HOPS endocytic tethering complex; vacuole membrane protein; functions as a Rab GTPase effector, interacting with both GTP- and GDP-bound conformations of Ypt7p; facilitates tethering and promotes membrane fusion events at the late endosome and vacuole; required for both membrane and protein trafficking; component of vacuole-mitochondrion contacts (vCLAMPs) important for lipid transfer between organelles","termid":"PBO:0084087"}


id: GO:0008422
data:
  {"annotated_genes":["SJAG_00667","SJAG_05001","SJAG_02478","SJAG_02649","SJAG_03646","SJAG_02192","SJAG_01888","SJAG_03295","SJAG_01017","SJAG_01171"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83585,104491,111710],"is_not":false,"summary":null,"term":"GO:0008422"},{"annotations":[91210,96250,90129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042973"},{"annotations":[104169,98053,98052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046557"},{"annotations":[98054,98055,84419,104170,91211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004338"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-D-glucose residues with release of beta-D-glucose.","definition_xrefs":["EC:3.2.1.21","PMID:12594539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_02192":null,"SJAG_02478":null,"SJAG_02649":null,"SJAG_03295":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"beta-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.2.1.21-RXN","GO:0016983"],"synonyms":[{"name":"amygdalase activity","type":"narrow"},{"name":"amygdalinase","type":"narrow"},{"name":"arbutinase activity","type":"narrow"},{"name":"aryl-beta-glucosidase activity","type":"related"},{"name":"beta-1,6-glucosidase activity","type":"related"},{"name":"beta-D-glucosidase activity","type":"exact"},{"name":"beta-D-glucoside glucohydrolase activity","type":"related"},{"name":"beta-glucoside glucohydrolase activity","type":"exact"},{"name":"cellobiase activity","type":"narrow"},{"name":"cytokine beta-glucosidase activity","type":"narrow"},{"name":"elaterase activity","type":"narrow"},{"name":"emulsin","type":"related"},{"name":"gentiobiase activity","type":"narrow"},{"name":"gentobiase activity","type":"narrow"},{"name":"limarase activity","type":"narrow"},{"name":"p-nitrophenyl beta-glucosidase activity","type":"narrow"},{"name":"primeverosidase activity","type":"narrow"},{"name":"quercetin 3'-O-beta-D-glucopyranoside hydrolase activity","type":"narrow"},{"name":"quercetin 4'-O-beta-D-glucopyranoside hydrolase activity","type":"narrow"},{"name":"salicilinase activity","type":"narrow"}],"termid":"GO:0008422","terms_by_termid":{"GO:0004338":null,"GO:0008422":null,"GO:0042973":null,"GO:0046557":null}}


id: GO:2001129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a dimethylamine.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"methane biosynthetic process from dimethylamine","termid":"GO:2001129"}


id: GO:1902357
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990556"}]},"cv_name":"biological_process","definition":"The process in which 2-isopropylmalate(2-) is transported across a membrane.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:18682385","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopropylmalate transport","termid":"GO:0034659"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"2-isopropylmalate(2-) transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902357","terms_by_termid":{"GO:1990556":null}}


id: PBO:0028301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphatase_activity_during_mitosis","termid":"PBO:0028301"}


id: PBO:0036474
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIStidine requiring","termid":"PBO:0036474"}


id: GO:0003365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"part_of","term_name":"ameboidal-type cell migration","termid":"GO:0001667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of cell polarity involved in ameboidal cell migration","termid":"GO:0003365"}


id: GO:0015783
data:
  {"annotated_genes":["SJAG_00339","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59041],"is_not":false,"summary":null,"term":"GO:0015783"},{"annotations":[89430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"}]},"cv_name":"biological_process","definition":"The directed movement of GDP-fucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GDP-fucose is a substance composed of fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide-sugar transmembrane transport","termid":"GO:0090480"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00339":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"GDP-fucose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"GDP-fucose transport","type":"related"}],"termid":"GO:0015783","terms_by_termid":{"GO:0015783":null,"GO:0036085":null}}


id: PBO:0002901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyphosphate synthetase (predicted)","termid":"PBO:0002901"}


id: PR:O59673
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp14 gene.","definition_xrefs":["UniProtKB:O59673","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit H, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.10c","synonyms":[{"name":"Spom972h-atp14","type":"exact"}],"termid":"PR:O59673"}


id: PBO:0046068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit K pseudogene 3","termid":"PBO:0046068"}


id: GO:0180014
data:
  {"annotated_genes":["SJAG_03629"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93347],"is_not":false,"summary":null,"term":"GO:0180014"}]},"cv_name":"molecular_function","definition":"The binding activity of a protein that brings together another protein and a tRNA, permitting those molecules to function in a coordinated way.","definition_xrefs":["PMID:31048492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA adaptor activity","termid":"GO:0140517"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03629":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"protein-tRNA adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA carrier","type":"related"}],"termid":"GO:0180014","terms_by_termid":{"GO:0180014":null}}


id: GO:1990714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of galactose from UDP-galactose to hydroxyproline residues present in the peptide backbone.","definition_xrefs":["PMID:25600942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"hydroxyproline O-galactosyltransferase activity","synonyms":[{"name":"HPGT","type":"exact"}],"termid":"GO:1990714"}


id: PBO:0049718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 4","termid":"PBO:0049718"}


id: PBO:0068284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 subunit B","termid":"PBO:0068284"}


id: GO:1903614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein tyrosine phosphatase activity.","definition_xrefs":["PMID:11129957","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphoprotein phosphatase activity","termid":"GO:0032515"},{"relation_name":"is_a","term_name":"regulation of protein tyrosine phosphatase activity","termid":"GO:1903613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein tyrosine phosphatase activity","synonyms":[{"name":"down regulation of PPT-phosphatase activity","type":"exact"},{"name":"down regulation of PTP-phosphatase activity","type":"exact"},{"name":"down regulation of PTPase activity","type":"exact"},{"name":"down regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"down regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"down regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"down regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"down regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"down regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"down regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"down regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"down regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"down regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"down regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"down regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"down-regulation of PPT-phosphatase activity","type":"exact"},{"name":"down-regulation of PTP-phosphatase activity","type":"exact"},{"name":"down-regulation of PTPase activity","type":"exact"},{"name":"down-regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"down-regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"down-regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"down-regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"down-regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"down-regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"down-regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"down-regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"down-regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"down-regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"down-regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"down-regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"downregulation of PPT-phosphatase activity","type":"exact"},{"name":"downregulation of PTP-phosphatase activity","type":"exact"},{"name":"downregulation of PTPase activity","type":"exact"},{"name":"downregulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"downregulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"downregulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"downregulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"downregulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"downregulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"downregulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"downregulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"downregulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"downregulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"downregulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"downregulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"inhibition of PPT-phosphatase activity","type":"narrow"},{"name":"inhibition of PTP-phosphatase activity","type":"narrow"},{"name":"inhibition of PTPase activity","type":"narrow"},{"name":"inhibition of [phosphotyrosine]protein phosphatase activity","type":"narrow"},{"name":"inhibition of phosphoprotein phosphatase (phosphotyrosine) activity","type":"narrow"},{"name":"inhibition of phosphotyrosine histone phosphatase activity","type":"narrow"},{"name":"inhibition of phosphotyrosine phosphatase activity","type":"narrow"},{"name":"inhibition of phosphotyrosine protein phosphatase activity","type":"narrow"},{"name":"inhibition of phosphotyrosylprotein phosphatase activity","type":"narrow"},{"name":"inhibition of protein phosphotyrosine phosphatase activity","type":"narrow"},{"name":"inhibition of protein tyrosine phosphatase activity","type":"narrow"},{"name":"inhibition of protein-tyrosine-phosphatase activity","type":"narrow"},{"name":"inhibition of protein-tyrosine-phosphate phosphohydrolase activity","type":"narrow"},{"name":"inhibition of tyrosine O-phosphate phosphatase activity","type":"narrow"},{"name":"inhibition of tyrosylprotein phosphatase activity","type":"narrow"},{"name":"negative regulation of PPT-phosphatase activity","type":"exact"},{"name":"negative regulation of PTP-phosphatase activity","type":"exact"},{"name":"negative regulation of PTPase activity","type":"exact"},{"name":"negative regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"negative regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"negative regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"negative regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"negative regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"negative regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"negative regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"negative regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"negative regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"negative regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"negative regulation of tyrosylprotein phosphatase activity","type":"exact"}],"termid":"GO:1903614"}


id: GO:0071037
data:
  {"annotated_genes":["SJAG_03745","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88346,109368],"is_not":false,"summary":null,"term":"GO:0071037"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a small nuclear RNA (snRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target snRNA.","definition_xrefs":["GOC:dgf","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA catabolic process","termid":"GO:0016076"},{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03745":null,"SJAG_03984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0016073","GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent snRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent snRNA catabolic process","type":"related"}],"termid":"GO:0071037","terms_by_termid":{"GO:0071037":null}}


id: PBO:0034401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-dependent_on_(obsolete_dependent_on)","termid":"PBO:0034401"}


id: PBO:0004736
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.17","termid":"PBO:0004736"}


id: PBO:0002686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMR and DUF1771 domain protein (predicted)","termid":"PBO:0002686"}


id: GO:0051504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A branched pathway that produces the precursors to four structurally distinct types of polycyclic diterpenes. The pathway starts with the cyclization of geranylgeranyl diphosphate into ent-copalyl diphosphate and syn-copalyl diphosphate. The catalytic conversion by diterpene cyclases of these two compounds produces the four diterpene hydrocarbons which are precursors to the four structurally distinct classes of diterpene phytoalexins.","definition_xrefs":["MetaCyc:PWY-2981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"part_of","term_name":"diterpene phytoalexin biosynthetic process","termid":"GO:0051502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"diterpene phytoalexin precursor biosynthetic process pathway","synonyms":[{"name":"diterpene phytoalexin precursor anabolism pathway","type":"exact"},{"name":"diterpene phytoalexin precursor formation pathway","type":"exact"},{"name":"diterpene phytoalexin precursor synthesis pathway","type":"exact"}],"termid":"GO:0051504"}


id: PBO:0081462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 331","termid":"PBO:0081462"}


id: GO:0008774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde + CoA + NAD+ = acetyl-CoA + NADH + H+.","definition_xrefs":["EC:1.2.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"acetaldehyde dehydrogenase (acetylating) activity","secondary_identifiers":["RHEA:23288","MetaCyc:ACETALD-DEHYDROG-RXN"],"synonyms":[{"name":"ADA","type":"related"},{"name":"DmpF","type":"related"},{"name":"acetaldehyde:NAD+ oxidoreductase (CoA-acetylating)","type":"related"},{"name":"acylating acetaldehyde dehydrogenase activity","type":"related"},{"name":"aldehyde dehydrogenase (acylating) activity","type":"related"}],"termid":"GO:0008774"}


id: GO:0050988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The carboxylation of the N-terminal methionine of proteins to form the derivative N-carboxy-L-methionine.","definition_xrefs":["RESID:AA0363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-methionine modification","termid":"GO:0018206"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid carboxylation","termid":"GO:0050989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-methionine carboxylation","termid":"GO:0050988"}


id: PBO:0029096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cysteine_synthase_activity","termid":"PBO:0029096"}


id: PBO:0005507
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GPI8","termid":"PBO:0005507"}


id: GO:1990231
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein dimer containing two STING monomers. It binds cyclic purine di-nucleotides. Activation of the sting complex by 2',5'-3'-5'-cyclic GMP-AMP activates nuclear transcription factor kB (NF-kB) and interferon regulatory factor 3 (IRF3) which then induce transcription of the genes encoding type I IFN and cytokines active in the innate immune response.","definition_xrefs":["GOC:bhm","PMID:23706668","PMID:23910378","PMID:22705373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410","GO:0032991"],"is_obsolete":false,"name":"STING complex","synonyms":[{"name":"stimulator of interferon genes complex","type":"exact"}],"termid":"GO:1990231"}


id: GO:0042567
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of three proteins, which in animals is approximately 150kDa and consists of the insulin-like growth factor (IGF), the insulin-like growth factor binding protein-3 (IGFBP-3), or -5 (IGFBP-5) and an acid-labile subunit (ALS). The complex plays a role in growth and development.","definition_xrefs":["GOC:jl","PMID:12239079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin-like growth factor binding protein complex","termid":"GO:0016942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"insulin-like growth factor ternary complex","synonyms":[{"name":"IGF ternary complex","type":"exact"}],"termid":"GO:0042567"}


id: FYPO:0002013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein oxidation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein oxidation during vegetative growth","synonyms":[{"name":"normal protein oxidation during mitotic cell cycle","type":"related"},{"name":"normal protein/peptide oxidation during vegetative growth","type":"exact"}],"termid":"FYPO:0002013"}


id: PBO:0052424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIRREL3 antisense RNA 3","termid":"PBO:0052424"}


id: PBO:0089524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-methylthioribulose-1-phosphate dehydratase, adducin Mta3","termid":"PBO:0089524"}


id: PBO:0048512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP dissociation inhibitor 1","termid":"PBO:0048512"}


id: PBO:0061601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUBP iron-sulfur cluster assembly factor 2, cytosolic","termid":"PBO:0061601"}


id: GO:0033272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of myo-inositol hexakisphosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"myo-inositol phosphate transport","termid":"GO:0033271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate transport","synonyms":[{"name":"phytate transport","type":"exact"}],"termid":"GO:0033272"}


id: PBO:0005099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP215/Dis1 family","termid":"PBO:0005099"}


id: PBO:0071452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 58","termid":"PBO:0071452"}


id: PBO:0016085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related endocytic adaptor Any1","termid":"PBO:0016085"}


id: GO:0080120
data:
  {"annotated_genes":["SJAG_03396","SJAG_00730"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85686,93452],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071586"}]},"cv_name":"biological_process","definition":"A series of specific posttranslational modifications to the CAAX box region of CAAX box proteins. CAAX box proteins are eukaryotic proteins that contain a CAAX motif where the C is a cysteine, the two A residues are aliphatic amino acids and the X can be one of several amino acids. The CAAX-box proteins undergo three sequential, enzymatic, post-translational modifications essential to their targeting: First, the proteins are prenylated by one of two prenyltransferases called farnesyltransferase and geranylgeranyltransferase-I. Prenylation results in the covalent attachment of either farnesyl or geranylgeranyl isoprenoid groups to the cysteine in the CAAX box motif. Prenylation is followed by proteolytic removal of the last three amino acids of the protein (AAX). Finally, the newly exposed carboxylate group of the isoprenylcysteine is methylated by an ER-associated prenyl-dependent carboxylmethyltransferase.","definition_xrefs":["PMID:18641086","PMID:17114793","PMID:12039957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00730":null,"SJAG_03396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"CAAX-box protein maturation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CAAX-box protein processing","type":"related"},{"name":"farnesylated protein maturation","type":"related"}],"termid":"GO:0080120","terms_by_termid":{"GO:0071586":null}}


id: PBO:0028403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ubiquinone_binding","termid":"PBO:0028403"}


id: GO:0008554
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108449],"is_not":false,"summary":null,"term":"GO:0008554"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out); by a phosphorylative mechanism.","definition_xrefs":["PMID:9224683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"P-type sodium transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-17739","RHEA:14633","EC:7.2.2.3"],"synonyms":[{"name":"Na(+)-exporting ATPase activity","type":"broad"},{"name":"Na(+)-transporting ATPase activity","type":"broad"},{"name":"Na+-exporting ATPase activity","type":"broad"},{"name":"Na+-transporting ATPase activity","type":"broad"},{"name":"sodium exporting ATPase activity, phosphorylative mechanism","type":"exact"},{"name":"sodium transmembrane transporter activity, phosphorylative mechanism","type":"exact"},{"name":"sodium transport ATPase activity","type":"broad"},{"name":"sodium-exporting ATPase activity","type":"broad"},{"name":"sodium-exporting ATPase activity, phosphorylative mechanism","type":"exact"},{"name":"sodium-translocating P-type ATPase activity","type":"exact"}],"termid":"GO:0008554","terms_by_termid":{"GO:0008554":null}}


id: PR:O13782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cpp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein farnesyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.04c","synonyms":[{"name":"CAAX farnesyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FTase-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cpp1","type":"exact"},{"name":"ras proteins prenyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13782"}


id: GO:0060161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the dopamine receptor protein signaling pathway. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of dopamine receptor signaling pathway","termid":"GO:0060159"},{"relation_name":"positively_regulates","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine receptor signaling pathway","synonyms":[{"name":"positive regulation of dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060161"}


id: PBO:0045714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 2","termid":"PBO:0045714"}


id: GO:0000166
data:
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id: GO:0043938
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  {"annotated_genes":["SJAG_02169","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86841],"is_not":false,"summary":null,"term":"GO:0043938"},{"annotations":[98394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of sporulation, the process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation","termid":"GO:0043937"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"sporulation","termid":"GO:0043934"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporulation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043938","terms_by_termid":{"GO:0043938":null,"GO:0075296":null,"GO:1903024":null}}


id: PR:Q9UT21
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A developmentally-regulated GTP-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11702:SF8","OMA:SCHPO00593","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GTP-binding protein C9.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.07c","secondary_identifiers":["UniProtKB:Q9UT21"],"synonyms":[{"name":"Spom972h-DRG1","type":"exact"}],"termid":"PR:Q9UT21"}


id: PBO:0011145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit, vacuolar sorting protein Vps33","termid":"PBO:0011145"}


id: GO:0048374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral mesoderm cell fate determination.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"lateral mesodermal cell fate determination","termid":"GO:0048373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral mesodermal cell fate determination","synonyms":[{"name":"regulation of lateral mesoderm cell fate determination","type":"exact"},{"name":"regulation of lateral plate mesoderm cell fate determination","type":"exact"},{"name":"regulation of lateral plate mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048374"}


id: GO:0014701
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the sarcoplasmic reticulum membrane that contains calcium release channels, is devoted to calcium release and is juxtaposed to transverse tubule membrane. The junctional sarcoplasmic reticulum membrane consists of the junctional region of the terminal cisterna membrane.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005789","GO:0005575"],"is_obsolete":false,"name":"junctional sarcoplasmic reticulum membrane","termid":"GO:0014701"}


id: GO:0070141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-A radiation stimulus. UV-A radiation (UV-A light) spans the wavelengths 315 to 400 nm.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to UV-A","synonyms":[{"name":"response to UV-A light stimulus","type":"exact"},{"name":"response to UV-A radiation stimulus","type":"exact"},{"name":"response to UVA light stimulus","type":"exact"},{"name":"response to UVA radiation stimulus","type":"exact"}],"termid":"GO:0070141"}


id: GO:0070542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus.","definition_xrefs":["GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fatty acid","termid":"GO:0070542"}


id: PR:P24865
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cig1 gene.","definition_xrefs":["UniProtKB:P24865","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/mitotic-specific cyclin cig1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4E9.02","synonyms":[{"name":"Spom972h-cig1","type":"exact"}],"termid":"PR:P24865"}


id: GO:0034336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an RNA molecule that has assumed an incorrect conformation.","definition_xrefs":["GOC:mah","PMID:10393192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"misfolded RNA binding","synonyms":[{"name":"RNA chaperone","type":"related"}],"termid":"GO:0034336"}


id: PBO:0001257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Hsr1","termid":"PBO:0001257"}


id: PBO:0030538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cAMP_level_during_glucose_starvation","termid":"PBO:0030538"}


id: PBO:0078150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 28 (pseudogene)","termid":"PBO:0078150"}


id: GO:0009651
data:
  {"annotated_genes":["SJAG_02883","SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[96271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to salt stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to ionic osmotic stress","type":"exact"},{"name":"salinity response","type":"exact"}],"termid":"GO:0009651","terms_by_termid":{"GO:0071472":null,"GO:0071473":null}}


id: PBO:0044941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrodolichyl diphosphate synthase subunit","termid":"PBO:0044941"}


id: GO:0021704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the locus ceruleus is generated and organized. In mice, the locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic.","definition_xrefs":["GOC:cls","ISBN:0838580343","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"},{"relation_name":"part_of","term_name":"locus ceruleus development","termid":"GO:0021703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locus ceruleus morphogenesis","termid":"GO:0021704"}


id: PBO:0081487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 383","termid":"PBO:0081487"}


id: SO:0001668
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA segment that ranges from about -250 to -40 relative to +1 of RNA transcription start site, where sequence specific DNA-binding transcription factors binds, such as Sp1, CTF (CCAAT-binding transcription factor), and CBF (CCAAT-box binding factor).","definition_xrefs":["PMID:12515390","PMID:9679020","SO:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_promoter_element","termid":"SO:0001678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proximal_promoter_element","synonyms":[{"name":"proximal promoter element","type":"related"},{"name":"specific transcription factor binding site","type":"related"}],"termid":"SO:0001668"}


id: PBO:0050911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 2","termid":"PBO:0050911"}


id: PBO:0039032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 9","termid":"PBO:0039032"}


id: PBO:0008966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIb-related protein (predicted)","termid":"PBO:0008966"}


id: PBO:0018081
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MCM10","termid":"PBO:0018081"}


id: PBO:0001977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chs five related protein Cfr1","termid":"PBO:0001977"}


id: PBO:0073952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 1","termid":"PBO:0073952"}


id: GO:0002635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of germinal center formation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of germinal center formation","termid":"GO:0002634"},{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"germinal center formation","termid":"GO:0002467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of germinal center formation","synonyms":[{"name":"down regulation of germinal center formation","type":"exact"},{"name":"down-regulation of germinal center formation","type":"exact"},{"name":"downregulation of germinal center formation","type":"exact"},{"name":"inhibition of germinal center formation","type":"narrow"}],"termid":"GO:0002635"}


id: PBO:0089064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-dependent formaldehyde dehydrogenase","termid":"PBO:0089064"}


id: PBO:0005310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-B (predicted)","termid":"PBO:0005310"}


id: PBO:0088018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type V myosin motor involved in actin-based transport of cargos; required for mRNA transport, including ASH1 mRNA, and facilitating the growth and movement of ER tubules into the growing bud along with She3p; MYO4 has a paralog, MYO2, that arose from the whole genome duplication","termid":"PBO:0088018"}


id: GO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a natural killer cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte differentiation","termid":"GO:0030098"},{"relation_name":"is_a","term_name":"natural killer cell activation","termid":"GO:0030101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell differentiation","synonyms":[{"name":"NK cell differentiation","type":"exact"},{"name":"natural killer cell development","type":"related"}],"termid":"GO:0001779"}


id: PBO:0042304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD19 molecule","termid":"PBO:0042304"}


id: GO:0051626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter epinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"epinephrine uptake","termid":"GO:0051625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of epinephrine uptake","synonyms":[{"name":"regulation of adrenaline uptake","type":"exact"},{"name":"regulation of epinephrine import","type":"exact"}],"termid":"GO:0051626"}


id: PATO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000335 variegated (obsolete PATO:0000335)","synonyms":[{"name":"mottled (sensu Drosophila)","type":"related"}],"termid":"PATO:0000335"}


id: FYPO:0001363
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[115522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"},{"annotations":[115398,115394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[115529],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[115388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cellular metabolic process is abnormal in the vegetative growth phase of the life cycle. A metabolic process is any set of chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances.","definition_xrefs":["GO:0044237","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_02763":null,"SJAG_03940":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":6,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal metabolic process during vegetative growth","references_by_uniquename":{"PMID:26774782":null,"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697","SJAG_03940","SJAG_01787","SJAG_00610","SJAG_04551"],"single_locus_genotype_uniquenames":["pck1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","gms1delta","pck2delta","nem2delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cellular metabolic process during vegetative growth","type":"exact"},{"name":"abnormal metabolic process during mitotic cell cycle","type":"related"},{"name":"abnormal metabolism during vegetative growth","type":"exact"}],"termid":"FYPO:0001363","terms_by_termid":{"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0003727":null,"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: PBO:0083188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YIL177C","termid":"PBO:0083188"}


id: PBO:0074316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD5 antisense RNA 1","termid":"PBO:0074316"}


id: GO:0034602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + CoA + NAD+ = succinyl-CoA + CO2 + NADH.","definition_xrefs":["GOC:mah","RHEA:27786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxoglutarate dehydrogenase [NAD(P)+] activity","termid":"GO:0034601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxoglutarate dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:2OXOGLUTARATEDEH-RXN","EC:1.2.1.105","Reactome:R-HSA-71037","KEGG_REACTION:R08549","Reactome:R-HSA-71401"],"termid":"GO:0034602"}


id: GO:0110128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of unloading sucrose that is produced in the source tissues, from the sieve tube or companion cell of the phloem into the sink tissues.","definition_xrefs":["GOC:lr","PMID:30018170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose transport","termid":"GO:0015770"},{"relation_name":"is_a","term_name":"phloem unloading","termid":"GO:0110127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"phloem sucrose unloading","termid":"GO:0110128"}


id: GO:0043095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of the enzyme GTP cyclohydrolase I.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of GTP cyclohydrolase I activity","termid":"GO:0043095"}


id: GO:0015367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: oxoglutarate(out) + malate(in) = oxoglutarate(in) + malate(out).","definition_xrefs":["TC:2.A.29.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoglutarate transmembrane transporter activity","termid":"GO:0015139"},{"relation_name":"is_a","term_name":"malate transmembrane transporter activity","termid":"GO:0015140"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"oxoglutarate:malate antiporter activity","secondary_identifiers":["Reactome:R-HSA-198440","Reactome:R-HSA-376851"],"synonyms":[{"name":"2-oxoglutarate/malate carrier protein","type":"exact"}],"termid":"GO:0015367"}


id: PR:P11620
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ras-related protein Rab-1B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03481","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.10","secondary_identifiers":["UniProtKB:P11620"],"synonyms":[{"name":"Spom972h-RAB1B","type":"exact"}],"termid":"PR:P11620"}


id: PR:O42914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- oga1 gene.","definition_xrefs":["UniProtKB:O42914","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16A3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.08c","synonyms":[{"name":"Spom972h-oga1","type":"exact"}],"termid":"PR:O42914"}


id: FYPO:0003513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of hercynylcysteine sulfoxide measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"hercynylcysteine sulfoxide absent from cell","synonyms":[{"name":"hercynylcysteine sulphoxide absent from cell","type":"exact"}],"termid":"FYPO:0003513"}


id: GO:0060717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a chorion from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The chorion is an extraembryonic membrane.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraembryonic membrane development","termid":"GO:1903867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorion development","termid":"GO:0060717"}


id: PBO:0017746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucoside transmembrane transporter Sut1","termid":"PBO:0017746"}


id: PBO:0084422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major isomaltase (alpha-1,6-glucosidase/alpha-methylglucosidase); required for isomaltose utilization; preferred specificity for isomaltose, alpha-methylglucoside, and palatinose, but also exhibits alpha-1,2 glucosidase activity on sucrose and kojibiose, and can cleave the 1,3-alpha linkage of nigerose and turanose and the alpha-1,5 linkage of leucrose in vitro; member of the IMA isomaltase family","termid":"PBO:0084422"}


id: GO:0015046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced rubredoxin + NADP+ = oxidized rubredoxin + NADPH + H+.","definition_xrefs":["RHEA:13949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rubredoxin-NAD(P)+ reductase activity","termid":"GO:0015045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"rubredoxin-NADP+ reductase activity","termid":"GO:0015046"}


id: PBO:0026970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_plasma_membrane_sterol_distribution","termid":"PBO:0026970"}


id: GO:1990787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the activity of a transcription factor that activates transcription of Hedgehog-target genes in response to Smoothened signaling. In Drosophila, Cubitus interruptus (Ci) is the only identified transcription factor so far in the Hedgehog signaling pathway. In vertebrates members of the Gli protein family are activated by Hedgehog signaling.","definition_xrefs":["GOC:bhm","PMID:24311597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smoothened signaling pathway","termid":"GO:0045879"},{"relation_name":"is_a","term_name":"regulation of DNA-binding transcription factor activity","termid":"GO:0051090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006351","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"negative regulation of hh target transcription factor activity","synonyms":[{"name":"negative regulation of hedgehog target transcription factor","type":"exact"}],"termid":"GO:1990787"}


id: PBO:0113363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to the Rap1p C-terminus; inhibits MRX-dependent Tel1p activity by acting directly on Rad50p and discharging its activated ATP-bound state, thereby rendering the MRX complex incompetent for Tel1p activation; acts synergistically with Rif1p to help control telomere length, establish telomeric silencing; deletion results in telomere elongation; RIF2 has paralog ORC4 that arose from the whole genome duplication","termid":"PBO:0113363"}


id: PBO:0054632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2037","termid":"PBO:0054632"}


id: SO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Five_methoxycarbonylmethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxycarbonylmethyluridine","secondary_identifiers":["RNAMOD:068"],"synonyms":[{"name":"5-methoxycarbonylmethyluridine","type":"exact"},{"name":"five methoxycarbonylmethyluridine","type":"exact"},{"name":"mcm5U","type":"exact"}],"termid":"SO:0001360"}


id: GO:0098980
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense specialization of the presynaptic active zone cytoskeleton.","definition_xrefs":["GOC:dos","PMID:26780543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton of presynaptic active zone","termid":"GO:0048788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"presynaptic density","termid":"GO:0098980"}


id: GO:0001955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel maturation","termid":"GO:0001955"}


id: PBO:0074091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 6","termid":"PBO:0074091"}


id: PBO:0108965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule associated protein 1B","termid":"PBO:0108965"}


id: PBO:0016107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-3 phosphoglycerate dehydrogenase Ser3 (predicted)","termid":"PBO:0016107"}


id: PBO:0048154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forty-two-three domain containing 1 pseudogene 1","termid":"PBO:0048154"}


id: FYPO:0004784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a histone methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"},{"relation_name":"is_a","term_name":"decreased protein methyltransferase activity","termid":"FYPO:0005725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000002","FYPO:0005447","FYPO:0000661","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"decreased histone methyltransferase activity","synonyms":[{"name":"reduced histone methyltransferase activity","type":"exact"}],"termid":"FYPO:0004784"}


id: GO:0030415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the enzyme carboxypeptidase A.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete carboxypeptidase A inhibitor activity (obsolete GO:0030415)","synonyms":[{"name":"carboxypeptidase A inhibitor activity","type":"exact"}],"termid":"GO:0030415"}


id: PBO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pot1 associated protein Poz1","termid":"PBO:0002349"}


id: PBO:0030426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_centromere_clustering_at_nuclear_periphery","termid":"PBO:0030426"}


id: PBO:0086190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to heat shock transcription factor; multicopy suppressor of pseudohyphal growth defects of ammonium permease mutants","termid":"PBO:0086190"}


id: GO:0060610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mammary gland mesenchymal cell. Mammary gland mesenchymal cells form a loosely connected network of cells that surround the mammary ducts.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in mammary gland development","synonyms":[{"name":"mammary gland mesenchymal cell differentiation","type":"exact"}],"termid":"GO:0060610"}


id: PBO:0108702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RasGAP Gap1","termid":"PBO:0108702"}


id: PBO:0000467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol 14-demethylase (predicted)","termid":"PBO:0000467"}


id: GO:0070309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a lens fiber cell are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a lens fiber cell. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["GOC:mah","PMID:7693735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"lens morphogenesis in camera-type eye","termid":"GO:0002089"},{"relation_name":"part_of","term_name":"lens fiber cell development","termid":"GO:0070307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell morphogenesis","synonyms":[{"name":"elongation of lens fiber cell","type":"narrow"},{"name":"lens fiber cell morphogenesis during differentiation","type":"exact"},{"name":"lens fibre cell morphogenesis","type":"exact"}],"termid":"GO:0070309"}


id: PBO:0028273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_microtubule_dwell_time_at_cell_tip","termid":"PBO:0028273"}


id: PBO:0060761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 5","termid":"PBO:0060761"}


id: GO:0006504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent or non-covalent attachment of a geranylgeranyl group to the carboxy-terminus of a protein.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal protein geranylgeranylation (obsolete GO:0006504)","synonyms":[{"name":"C-terminal protein geranylgeranylation","type":"exact"}],"termid":"GO:0006504"}


id: FYPO:0003920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the mating-type locus occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at mating-type locus","termid":"FYPO:0003083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased replication fork arrest at mating-type locus","synonyms":[{"name":"increased replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"increased replication fork arrest at mating-type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0003920"}


id: PR:O74508
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component spp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.05c","synonyms":[{"name":"COMPASS component spp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component spp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spf1","type":"exact"},{"name":"complex proteins associated with set1 protein spp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74508"}


id: PBO:0070117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 31 pseudogene","termid":"PBO:0070117"}


id: MOD:01772
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The palmityl cation protein modification reporter fragment produced by fragmentation of some palmitoyl modified residues.","definition_xrefs":["PubMed:8413602","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"palmitoylated residue","termid":"MOD:00440"},{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmityl reporter fragment","synonyms":[{"name":"Pam+","type":"exact"},{"name":"palmityl cation","type":"related"}],"termid":"MOD:01772"}


id: PBO:0056608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic enzyme 1","termid":"PBO:0056608"}


id: GO:1900546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in positive regulation of phenotypic switching.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900546)","synonyms":[{"name":"activation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900546"}


id: GO:0098777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Protein secretion through the outer membrane via the mechanism used for the secretion of curli subunits.","definition_xrefs":["PMID:19299134","PMID:24080089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport across the cell outer membrane","termid":"GO:0098776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"protein secretion by the type VIII secretion system","synonyms":[{"name":"T8SS","type":"exact"}],"termid":"GO:0098777"}


id: GO:0097213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the lysosomal membrane.","definition_xrefs":["GOC:yaf","PMID:20544854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane permeability","termid":"GO:0090559"},{"relation_name":"is_a","term_name":"lysosomal membrane organization","termid":"GO:0097212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of lysosomal membrane permeability","synonyms":[{"name":"regulation of lysosome membrane permeability","type":"exact"}],"termid":"GO:0097213"}


id: GO:0015802
data:
  {"annotated_genes":["SJAG_00877","SJAG_00051","SJAG_02029","SJAG_04715","SJAG_02716","SJAG_04983","SJAG_01923","SJAG_01336","SJAG_04725","SJAG_03256","SJAG_03400","SJAG_01636"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86513],"is_not":false,"summary":null,"term":"GO:0015802"},{"annotations":[86512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[90701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[84573,100125,100127,100128,93457,100126,63520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990822"},{"annotations":[99938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[62675,94923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[93473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[98905,99942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[106120,99943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of basic amino acids, amino acids with a pH above 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01336":null,"SJAG_01636":null,"SJAG_01923":null,"SJAG_02029":null,"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04715":null,"SJAG_04725":null,"SJAG_04983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"basic amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015802","terms_by_termid":{"GO:0015802":null,"GO:0034488":null,"GO:0034490":null,"GO:0089708":null,"GO:0090513":null,"GO:0090517":null,"GO:0090518":null,"GO:1901482":null,"GO:1903826":null,"GO:1990822":null}}


id: PBO:0087845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC1 RNA-associated factor involved in telomere length regulation; recruitment subunit of telomerase; has G-quadruplex promoting activity required for telomere elongation; role in activating telomere-bound Est2p-TLC1-RNA; EST1 has a paralog, EBS1, that arose from the whole genome duplication","termid":"PBO:0087845"}


id: PBO:0050465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HORMA domain containing 2","termid":"PBO:0050465"}


id: PBO:0076634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 1 Y-linked pseudogene 1","termid":"PBO:0076634"}


id: GO:0060889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a limb epidermal basal cell. A epidermal basal cell cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into more specialized cell of the limb epidermis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal cell differentiation","termid":"GO:0009913"},{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"},{"relation_name":"part_of","term_name":"limb epidermis development","termid":"GO:0060887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb basal epidermal cell differentiation","termid":"GO:0060889"}


id: GO:0031840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 neuromedin U receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromedin U receptor binding","termid":"GO:0042922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 2 neuromedin U receptor binding","synonyms":[{"name":"type 2 neuromedin U receptor ligand","type":"narrow"}],"termid":"GO:0031840"}


id: PBO:0075965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 6","termid":"PBO:0075965"}


id: PBO:0018235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus-end directed microtubule motor kinesin-14, Klp2","termid":"PBO:0018235"}


id: FYPO:0001273
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic spindle elongation begins, but mitotic sister chromatid segregation stops before completing separation of chromosomes, and DNA remains in a single mass at or near the midpoint of the mitotic spindle.","definition_xrefs":["PMID:22711988","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete, unequal mitotic sister chromatid segregation","termid":"FYPO:0001271"},{"relation_name":"is_a","term_name":"mitotic spindle elongation without chromosome separation","termid":"FYPO:0003758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000337","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"mitotic spindle elongation with incomplete, unequal mitotic sister chromatid segregation and unseparated DNA","synonyms":[{"name":"mitotic spindle elongation with incomplete, unequal mitotic sister chromatid segregation and unseparated DNA during vegetative growth","type":"exact"},{"name":"mitotic spindle elongation with incomplete, unequal mitotic sister chromatid separation, with unseparated DNA","type":"related"},{"name":"spindle elongation with incomplete, unequal mitotic sister chromatid segregation and unseparated DNA during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001273"}


id: GO:0051324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which is the first stage of M phase of meiosis and mitosis and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"M phase","termid":"GO:0000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prophase","secondary_identifiers":["Wikipedia:Prophase"],"termid":"GO:0051324"}


id: GO:0018307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of part of an enzyme to form the active site.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation (obsolete GO:0018307)","termid":"GO:0018307"}


id: PBO:0091726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, expressed in late meiosis and quiescence","termid":"PBO:0091726"}


id: PBO:0056514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscleblind like splicing regulator 3","termid":"PBO:0056514"}


id: PBO:0068985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 229, pseudogene","termid":"PBO:0068985"}


id: PBO:0075327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOGA family member 3","termid":"PBO:0075327"}


id: PBO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein","termid":"PBO:0001050"}


id: PBO:0088016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I membrane protein with a J domain; required to preserve the folding capacity of the endoplasmic reticulum; loss of the non-essential ERJ5 gene leads to a constitutively induced unfolded protein response","termid":"PBO:0088016"}


id: PBO:0057878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3182","termid":"PBO:0057878"}


id: GO:0006264
data:
  {"annotated_genes":["SJAG_02658","SJAG_03957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91857,112455],"is_not":false,"summary":null,"term":"GO:0006264"}]},"cv_name":"biological_process","definition":"The process in which new strands of DNA are synthesized in the mitochondrion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"},{"relation_name":"is_a","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02658":null,"SJAG_03957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260","GO:0007005"],"is_obsolete":false,"name":"mitochondrial DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial DNA synthesis","type":"related"},{"name":"mtDNA replication","type":"exact"},{"name":"mtDNA synthesis","type":"related"},{"name":"replication of mitochondrial DNA","type":"exact"}],"termid":"GO:0006264","terms_by_termid":{"GO:0006264":null}}


id: PBO:0069415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 677, pseudogene","termid":"PBO:0069415"}


id: PBO:0069417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 679, pseudogene","termid":"PBO:0069417"}


id: PBO:0040470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATR serine/threonine kinase","termid":"PBO:0040470"}


id: PBO:0047543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 2","termid":"PBO:0047543"}


id: PATO:0000710
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000710 time value (obsolete PATO:0000710)","termid":"PATO:0000710"}


id: GO:0052039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host cytoskeleton. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cytoskeleton","secondary_identifiers":["GO:0044054"],"synonyms":[{"name":"disruption by symbiont of host cytoskeleton","type":"related"},{"name":"modification by symbiont of host cytoskeleton","type":"related"},{"name":"perturbation by symbiont of host cytoskeleton","type":"exact"},{"name":"rounding by symbiont of host cells","type":"narrow"}],"termid":"GO:0052039"}


id: GO:0090521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a podocyte from one site to another, often during the development of a multicellular organism or multicellular structure. A podocyte is a specialized kidney epithelial cell.","definition_xrefs":["PMID:21402783","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte cell migration","synonyms":[{"name":"glomerular visceral epithelial cell migration","type":"exact"}],"termid":"GO:0090521"}


id: GO:0003980
data:
  {"annotated_genes":["SJAG_04571"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109869],"is_not":false,"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the addition of UDP-glucose on to asparagine-linked (N-linked) oligosaccharides of the form Man7-9GlcNAc2 on incorrectly folded glycoproteins.","definition_xrefs":["GOC:al","PMID:10764828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"UDP-glucose:glycoprotein glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-548884","RHEA:61304"],"synonyms":[{"name":"UGGT activity","type":"exact"}],"termid":"GO:0003980","terms_by_termid":{"GO:0003980":null}}


id: FYPO:0004940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing chloroacetaldehyde.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on chloroacetaldehyde","synonyms":[{"name":"normal cell population growth in presence of chloroacetaldehyde","type":"exact"},{"name":"normal cell population growth on CAA","type":"exact"},{"name":"normal cell population growth on chloroacetaldehyde","type":"exact"},{"name":"normal cellular response to chloroacetaldehyde","type":"related"},{"name":"normal vegetative cell population growth on chloroacetaldehyde","type":"exact"}],"termid":"FYPO:0004940"}


id: FYPO:0008266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphate (Pi) in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular phosphate (Pi) level","termid":"FYPO:0008266"}


id: PBO:0029399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleoplasm","termid":"PBO:0029399"}


id: FYPO:0003240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphodiesterase I activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphodiesterase I activity","termid":"FYPO:0003239"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased phosphodiesterase I activity","synonyms":[{"name":"reduced phosphodiesterase I activity","type":"exact"}],"termid":"FYPO:0003240"}


id: PBO:0086533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; overlaps ORF YEL010W","termid":"PBO:0086533"}


id: PBO:0027667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing","termid":"PBO:0027667"}


id: FYPO:0006977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the ubiquitination of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein ubiquitination","synonyms":[{"name":"abnormal protein ubiquitinylation","type":"related"},{"name":"abnormal protein ubiquitylation","type":"exact"}],"termid":"FYPO:0006977"}


id: GO:1990665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex comprising two Annexin A2 (AnxA2) monomers and two copies of its binding partner, S100 protein p11 (S100A10).","definition_xrefs":["PMID:23483454","GOC:nc","PMID:18799458","GOC:bf","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"AnxA2-p11 complex","synonyms":[{"name":"(A2.p11)2 complex","type":"exact"},{"name":"(p11)2.(AnxA2)2 complex","type":"exact"},{"name":"Annexin A2 tetramer","type":"related"},{"name":"Annexin A2-p11 complex","type":"exact"},{"name":"AnxA2.p11 complex","type":"exact"},{"name":"AnxA2:S100A10 heterotetramer","type":"exact"}],"termid":"GO:1990665"}


id: GO:0035937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of estrogen into the circulatory system. Estrogen is a steroid hormone that stimulates or controls the development and maintenance of female sex characteristics in mammals.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"estrogen secretion","synonyms":[{"name":"oestrogen secretion","type":"related"}],"termid":"GO:0035937"}


id: PBO:0089139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin related conserved fungal protein","termid":"PBO:0089139"}


id: PBO:0089689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar dipeptidyl peptidase","termid":"PBO:0089689"}


id: PR:000059631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein spc7 (Schizosaccharomyces pombe) that has been phosphorylated on residues at positions equivalent to Thr-257, Thr-338, Thr-366, Thr-395, Thr-422, Thr-453, Thr-507, Thr-529, and Thr-552 of the amino acid sequence represented by UniProtKB:O59757. Example: UniProtKB:O59757, Thr-257/Thr-338/Thr-366/Thr-395/Thr-422/Thr-453/Thr-507/Thr-529/Thr-552, MOD:00047.","definition_xrefs":["PMID:22521786","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spc7/Phos-MELT","pombase_gene_id":"SPCC1020.02","synonyms":[{"name":"PomBase_original_PRO_term_name: kinetochore protein spc7 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spc7/Phos-MELT","type":"exact"},{"name":"Spom-spc7/Phos:1","type":"exact"},{"name":"UniProtKB:O59757, Thr-257/Thr-338/Thr-366/Thr-395/Thr-422/Thr-453/Thr-507/Thr-529/Thr-552, MOD:00047","type":"narrow"}],"termid":"PR:000059631"}


id: PR:Q10134
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fep1 gene.","definition_xrefs":["UniProtKB:Q10134","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sensing transcription factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23E2.01","synonyms":[{"name":"Gaf-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fep1","type":"exact"},{"name":"transcription factor gaf2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10134"}


id: PBO:0077685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 14","termid":"PBO:0077685"}


id: PR:P87058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sla1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.10c","synonyms":[{"name":"La autoantigen homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"La ribonucleoprotein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sla1","type":"exact"}],"termid":"PR:P87058"}


id: GO:1903582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of basophil degranulation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:10880837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"is_a","term_name":"regulation of basophil degranulation","termid":"GO:1903581"},{"relation_name":"negatively_regulates","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of basophil degranulation","synonyms":[{"name":"down regulation of basophil degranulation","type":"exact"},{"name":"down-regulation of basophil degranulation","type":"exact"},{"name":"downregulation of basophil degranulation","type":"exact"},{"name":"inhibition of basophil degranulation","type":"narrow"}],"termid":"GO:1903582"}


id: GO:0032653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-10 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-10 production","termid":"GO:0032613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-10 production","secondary_identifiers":["GO:2001179","GO:0045074"],"synonyms":[{"name":"regulation of IL-10 production","type":"exact"},{"name":"regulation of interleukin-10 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-10 secretion","type":"narrow"}],"termid":"GO:0032653"}


id: GO:0052929
data:
  {"annotated_genes":["SJAG_02288","SJAG_01704"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69367,113996],"is_not":false,"summary":null,"term":"GO:0052929"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a tRNA with a 3' CC end + ATP = a tRNA with a 3' CCA end + diphosphate.","definition_xrefs":["PMID:31936900","PMID:33095240","RHEA:60012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01704":null,"SJAG_02288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140101","GO:0003824","GO:0016779","GO:0140098"],"is_obsolete":false,"name":"ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R09386"],"synonyms":[{"name":"ATP:3'-CC-tRNA adenylyltransferase activity","type":"exact"},{"name":"ATP:tRNA adenylyltransferase activity","type":"broad"}],"termid":"GO:0052929","terms_by_termid":{"GO:0052929":null}}


id: GO:1901800
data:
  {"annotated_genes":["SJAG_02723","SJAG_01544","SJAG_01210","SJAG_03048","SJAG_03699","SJAG_04477","SJAG_00642","SJAG_00071","SJAG_00712","SJAG_01489","SJAG_01131","SJAG_00766"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60862,64850,66428,66474,67388,67795],"is_not":false,"summary":null,"term":"GO:1901800"},{"annotations":[85074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[102748,98488,113156,104989,107808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proteasomal protein catabolic process.","definition_xrefs":["PMID:21669198","GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"regulation of proteasomal protein catabolic process","termid":"GO:0061136"},{"relation_name":"is_a","term_name":"positive regulation of proteolysis involved in protein catabolic process","termid":"GO:1903052"},{"relation_name":"positively_regulates","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"positive regulation of proteasomal protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of proteasomal protein catabolic process","type":"narrow"},{"name":"activation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"activation of proteasome-mediated protein catabolism","type":"exact"},{"name":"positive regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"positive regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"up regulation of proteasomal protein catabolic process","type":"exact"},{"name":"up regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"up regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"up-regulation of proteasomal protein catabolic process","type":"exact"},{"name":"up-regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"up-regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"upregulation of proteasomal protein catabolic process","type":"exact"},{"name":"upregulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"upregulation of proteasome-mediated protein catabolism","type":"exact"}],"termid":"GO:1901800","terms_by_termid":{"GO:0032436":null,"GO:1901800":null,"GO:1905786":null}}


id: FYPO:0004263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after entering stationary phase, under conditions of nitrogen limitation, such as in a medium that contains a low level of NH4Cl and no other nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal viability in stationary phase","termid":"FYPO:0001310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal viability in stationary phase during nitrogen limitation","synonyms":[{"name":"normal cell population viability in stationary phase during nitrogen limitation","type":"exact"}],"termid":"FYPO:0004263"}


id: PBO:0085402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein involved in remodeling GPI anchors; member of the MBOAT family of putative membrane-bound O-acyltransferases; role in misfolded protein quality control; proposed to be involved in glycerol transport; homolog of the mammalian Hedgehog pathway modulator HHATL; GUP1 has a paralog, GUP2, that arose from the whole genome duplication","termid":"PBO:0085402"}


id: GO:0003363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell that contributes to the directed self propelled movement of a cell.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellipodium assembly","termid":"GO:0030032"},{"relation_name":"part_of","term_name":"ameboidal-type cell migration","termid":"GO:0001667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"lamellipodium assembly involved in ameboidal cell migration","termid":"GO:0003363"}


id: PBO:0044591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developing brain homeobox 2","termid":"PBO:0044591"}


id: PBO:0031881
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binding between Myh1 and Hus1 increases in response to oxidative stress","termid":"PBO:0031881"}


id: PBO:0089111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in export of mRNAs Hrb1","termid":"PBO:0089111"}


id: GO:0048060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism away from the source of gravity.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gravitaxis","termid":"GO:0042332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative gravitaxis","secondary_identifiers":["GO:0048063"],"synonyms":[{"name":"negative geotactic behavior","type":"exact"},{"name":"negative geotactic behaviour","type":"exact"},{"name":"negative gravitactic behavior","type":"exact"},{"name":"negative gravitactic behaviour","type":"exact"},{"name":"negative taxis in response to gravity","type":"exact"},{"name":"negative taxis in response to gravitytaxis in response to gravitational stimulus","type":"exact"}],"termid":"GO:0048060"}


id: GO:0070246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a natural killer cell, a lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation.","definition_xrefs":["GOC:add","CL:0000623","PMID:15728472","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte apoptotic process","termid":"GO:0070227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell apoptotic process","synonyms":[{"name":"NK cell apoptosis","type":"exact"},{"name":"natural killer cell apoptosis","type":"narrow"}],"termid":"GO:0070246"}


id: PBO:0073641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 28, pseudogene","termid":"PBO:0073641"}


id: GO:0062043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:rph","PMID:20951801","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial to mesenchymal transition","termid":"GO:0010718"},{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"positively_regulates","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062043"}


id: GO:0016788
data:
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activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5358512","Reactome:R-HSA-5690990","Reactome:R-HSA-5358518","Reactome:R-HSA-72180","Reactome:R-HSA-5693533"],"termid":"GO:0004519","terms_by_termid":{"GO:0000014":null,"GO:0000171":null,"GO:0000213":null,"GO:0004519":null,"GO:0004520":null,"GO:0004521":null,"GO:0004523":null,"GO:0004525":null,"GO:0004526":null,"GO:0008419":null,"GO:0008821":null,"GO:0016891":null,"GO:0017108":null,"GO:0042781":null,"GO:0048257":null,"GO:0070551":null,"GO:0106332":null,"GO:1990043":null,"GO:1990174":null,"GO:1990238":null,"GO:1990599":null,"GO:1990601":null}}


id: FYPO:0003618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing aculeacin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on aculeacin A","synonyms":[{"name":"normal cell population growth in presence of aculeacin A","type":"exact"},{"name":"normal cell population growth on aculeacin A","type":"exact"},{"name":"normal cellular response to aculeacin A","type":"related"},{"name":"normal vegetative cell population growth on aculeacin A","type":"exact"}],"termid":"FYPO:0003618"}


id: PBO:0071484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 25","termid":"PBO:0071484"}


id: PBO:0039729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein C1","termid":"PBO:0039729"}


id: PBO:0061959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 15 pseudogene","termid":"PBO:0061959"}


id: GO:0032727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interferon-alpha production.","definition_xrefs":["PMID:15546383","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of type I interferon production","termid":"GO:0032481"},{"relation_name":"is_a","term_name":"regulation of interferon-alpha production","termid":"GO:0032647"},{"relation_name":"positively_regulates","term_name":"interferon-alpha production","termid":"GO:0032607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interferon-alpha production","secondary_identifiers":["GO:1902741","GO:0045356"],"synonyms":[{"name":"activation of interferon-alpha production","type":"narrow"},{"name":"positive regulation of interferon-alpha biosynthetic process","type":"narrow"},{"name":"positive regulation of interferon-alpha secretion","type":"narrow"},{"name":"stimulation of interferon-alpha production","type":"narrow"},{"name":"up regulation of interferon-alpha production","type":"exact"},{"name":"up-regulation of interferon-alpha production","type":"exact"},{"name":"upregulation of interferon-alpha production","type":"exact"}],"termid":"GO:0032727"}


id: GO:0034591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the rhoptry membrane.","definition_xrefs":["GOC:rph","PMID:17997128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle lumen","termid":"GO:0043233"},{"relation_name":"part_of","term_name":"rhoptry","termid":"GO:0020008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rhoptry lumen","termid":"GO:0034591"}


id: PBO:0030906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_during_vegetative_growth","termid":"PBO:0030906"}


id: GO:0097065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior part of the head over time, from its formation to the mature structure.","definition_xrefs":["PMID:14695376","GOC:yaf","PMID:15857913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head development","termid":"GO:0060322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior head development","termid":"GO:0097065"}


id: PBO:0047166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 193 member B","termid":"PBO:0047166"}


id: PATO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility which is relative low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"mobile","termid":"PATO:0000299"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased mobility","termid":"PATO:0002283"}


id: PBO:0049890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 9","termid":"PBO:0049890"}


id: GO:0090202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation and maintenance of DNA loops that juxtapose sequentially separated regions of RNA polymerase II-transcribed genes.","definition_xrefs":["GOC:rb","PMID:19933150","GOC:tb","PMID:19923429","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete gene looping (obsolete GO:0090202)","termid":"GO:0090202"}


id: PBO:0064616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 6","termid":"PBO:0064616"}


id: PBO:0059968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 13","termid":"PBO:0059968"}


id: PBO:0086778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YDL241W is not an essential gene","termid":"PBO:0086778"}


id: GO:0002529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the plasma kallikrein-kinin cascade.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinin cascade","termid":"GO:0002256"},{"relation_name":"regulates","term_name":"plasma kallikrein-kinin cascade","termid":"GO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of plasma kallikrein-kinin cascade","termid":"GO:0002529"}


id: PBO:0034608
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_cells_with_1C_DNA_content","termid":"PBO:0034608"}


id: PBO:0063953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-5-phosphate 4-kinase type 2 beta","termid":"PBO:0063953"}


id: PBO:0069179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 433, pseudogene","termid":"PBO:0069179"}


id: PATO:0001940
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in a bearer by virtue of the bearer's being many folds greater relative to the normal average.","definition_xrefs":["PATOC:UMH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gigantic","synonyms":[{"name":"giant","type":"exact"}],"termid":"PATO:0001940"}


id: PBO:0082305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartate kinase (L-aspartate 4-P-transferase); cytoplasmic enzyme that catalyzes the first step in the common pathway for methionine and threonine biosynthesis; expression regulated by Gcn4p and the general control of amino acid synthesis","termid":"PBO:0082305"}


id: PBO:0085426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polo-like kinase essential for mitotic cell cycle; controls targeting, activation of Rho1p at cell division site via Rho1p guanine nucleotide exchange factors; regulates shape of nucleus, expansion of nuclear envelope during mitosis; implicated in cell divisions in telomerase-negative strains through adaptation to DNA damage, which allows bypass of cell cycle arrest and contributes senescence-specific genome instability; human homologs PLK1, PLK3 can each complement cdc5 thermosensitive mutants","termid":"PBO:0085426"}


id: PBO:0062683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 4","termid":"PBO:0062683"}


id: PBO:0066649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras and Rab interactor 3","termid":"PBO:0066649"}


id: GO:0061679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The Entner-Doudoroff pathway that proceeds through a D-gluconate intermediate.","definition_xrefs":["PMID:12921536","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Entner-Doudoroff pathway","termid":"GO:0061678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"Entner-Doudoroff pathway through gluconate","synonyms":[{"name":"gluconate pathway","type":"related"}],"termid":"GO:0061679"}


id: GO:0052160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts systemic acquired resistance in the host organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host systemic acquired resistance","secondary_identifiers":["GO:0052299"],"synonyms":[{"name":"modulation by organism of systemic acquired resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host systemic acquired resistance","type":"exact"},{"name":"modulation by symbiont of systemic acquired resistance in host","type":"exact"},{"name":"perturbation of host systemic acquired resistance","type":"exact"}],"termid":"GO:0052160"}


id: PR:O14240
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eaf6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein eaf6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.09","synonyms":[{"name":"Spom972h-eaf6","type":"exact"}],"termid":"PR:O14240"}


id: GO:0007176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of EGF-activated receptor activity.","definition_xrefs":["GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of epidermal growth factor-activated receptor activity","synonyms":[{"name":"regulation of EGF receptor activity","type":"exact"},{"name":"regulation of EGFR activity","type":"exact"},{"name":"regulation of epidermal growth factor receptor activity","type":"exact"}],"termid":"GO:0007176"}


id: PBO:0006171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localizes_to","termid":"PBO:0006171"}


id: MOD:01115
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an L-tryptophan residue with a group derived from an isoprene polymer, such as a geranyl (C10), farnesyl (C15) or geranylgeranyl (C20).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoprenylated tryptophan","synonyms":[{"name":"IpTrp","type":"exact"}],"termid":"MOD:01115"}


id: GO:0023043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which information is sent from one location to another, within a living organism or between living organisms, via a lipid mediator.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signaling via lipid mediator (obsolete GO:0023043)","synonyms":[{"name":"signaling via lipid mediator","type":"exact"},{"name":"signalling via lipid mediator","type":"exact"}],"termid":"GO:0023043"}


id: GO:0038179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by neurotrophin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Neurotrophins are a family of secreted growth factors that induce the survival, development, and function of neurons.","definition_xrefs":["PMID:17466268","GOC:signaling","Wikipedia:Neurotrophin","GOC:bf","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neurotrophin signaling pathway","synonyms":[{"name":"neurotrophin receptor signaling pathway","type":"exact"}],"termid":"GO:0038179"}


id: PBO:0048394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2 like 1 pseudogene 1","termid":"PBO:0048394"}


id: GO:0060580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a ventral spinal cord interneuron regardless of its environment; upon determination, the cell fate cannot be reversed. Ventral spinal cord interneurons are cells located in the ventral portion of the spinal cord that transmit signals between sensory and motor neurons and are required for reflexive responses.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate determination","termid":"GO:0048664"},{"relation_name":"is_a","term_name":"cell fate determination involved in pattern specification","termid":"GO:0060582"},{"relation_name":"part_of","term_name":"ventral spinal cord interneuron fate commitment","termid":"GO:0060579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral spinal cord interneuron fate determination","termid":"GO:0060580"}


id: GO:0070460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of thyroid-stimulating hormone, a peptide hormone that stimulates the activity of the thyroid gland, from secretory granules in the anterior pituitary.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"thyroid-stimulating hormone secretion","synonyms":[{"name":"TSH secretion","type":"exact"},{"name":"thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:0070460"}


id: PBO:0061628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 11","termid":"PBO:0061628"}


id: PBO:0059518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2","termid":"PBO:0059518"}


id: PBO:0076679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1 pseudogene 4","termid":"PBO:0076679"}


id: GO:0044311
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense granule-like organelle of the apical complex of merozoites, released into the parasitophorous vacuole, mediating protease-dependent rupture and parasite exit from the infected erythrocyte.","definition_xrefs":["PMID:18083092","PMID:18083098","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"exoneme","termid":"GO:0044311"}


id: GO:1990281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of efflux transmembrane transporter activity.","definition_xrefs":["PMID:21556065","PMID:9417051","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"efflux pump complex","synonyms":[{"name":"efflux pump","type":"exact"},{"name":"efflux transmembrane transporter complex","type":"exact"}],"termid":"GO:1990281"}


id: PBO:0089065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty-acyl-CoA binding protein Acb1","termid":"PBO:0089065"}


id: GO:0044821
data:
  {"annotated_genes":["SJAG_03680","SJAG_01263","SJAG_01777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102035,110088],"is_not":false,"summary":null,"term":"GO:0044821"},{"annotations":[102033,85887],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"}]},"cv_name":"biological_process","definition":"The process in which a telomere is maintained in a specific location at the nuclear periphery, as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere tethering at nuclear periphery","termid":"GO:0034398"},{"relation_name":"is_a","term_name":"meiotic telomere clustering","termid":"GO:0045141"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01263":null,"SJAG_01777":null,"SJAG_03680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"meiotic telomere tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044821","terms_by_termid":{"GO:0044821":null,"GO:0070197":null}}


id: PBO:0113353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for pheromone-induced projection (shmoo) formation; regulates septin architecture during mating; has an RVXF motif that mediates targeting of Glc7p to mating projections; also detected in peroxisomes; interacts with Cdc12p; AFR1 has a paralog, YER158C, that arose from the whole genome duplication","termid":"PBO:0113353"}


id: PBO:0113266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoinositide-binding regulator of ergosterol distribution; contains PX (Phox homology) domain; associated with ER-lipid droplet contact site; may facilitate ergosterol transport between plasma membrane and lipid droplets","termid":"PBO:0113266"}


id: GO:0003359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a noradrenergic neuron.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"noradrenergic neuron differentiation","termid":"GO:0003357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron fate commitment","synonyms":[{"name":"norepinephrine secreting neuron fate commitment","type":"exact"}],"termid":"GO:0003359"}


id: PATO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male fertility which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male fertile","termid":"PATO:0000891"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased male fertility","synonyms":[{"name":"low male fertility","type":"exact"}],"termid":"PATO:0001833"}


id: PR:Q8TFG3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB18E9.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFG3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein PB18E9.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB18E9.05c","synonyms":[{"name":"Spom972h-SPAPB18E9.05c","type":"exact"}],"termid":"PR:Q8TFG3"}


id: GO:0032368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"is_a","term_name":"regulation of lipid localization","termid":"GO:1905952"},{"relation_name":"regulates","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of lipid transport","termid":"GO:0032368"}


id: SO:0000463
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes more than one transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_alternately_spliced_transcripts","synonyms":[{"name":"encodes alternately spliced transcripts","type":"exact"}],"termid":"SO:0000463"}


id: PBO:0083683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal SNARE related to mammalian syntaxin 8","termid":"PBO:0083683"}


id: GO:2000712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:2000712)","synonyms":[{"name":"regulation of maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:2000712"}


id: PBO:0061737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 1","termid":"PBO:0061737"}


id: GO:1903633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of leucine-tRNA ligase activity.","definition_xrefs":["GOC:TermGenie","PMID:2280766","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of leucine-tRNA ligase activity (obsolete GO:1903633)","synonyms":[{"name":"regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"regulation of leucine translase activity","type":"exact"},{"name":"regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1903633"}


id: GO:0018780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dichloroacetate + H2O = 2 HCl + glyoxylate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dichloroacetate halidohydrolase activity (obsolete GO:0018780)","termid":"GO:0018780"}


id: PBO:0087586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087586"}


id: GO:0032202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a telomere at a non-telomeric double-stranded DNA end. A telomere is a terminal region of a linear chromosome that includes telomeric DNA repeats and associated proteins.","definition_xrefs":["GOC:ns","PMID:8622671","PMID:11902675","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"telomere organization","termid":"GO:0032200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0032200"],"is_obsolete":false,"name":"telomere assembly","synonyms":[{"name":"telomere formation","type":"exact"}],"termid":"GO:0032202"}


id: GO:0009810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving stilbenes, a class of polyketides formed from a molecule of cinnamic acid and three molecules of malonyl-CoA.","definition_xrefs":["ISBN:3110116251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stilbene metabolic process","synonyms":[{"name":"stilbene metabolism","type":"exact"}],"termid":"GO:0009810"}


id: PBO:0034472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_spindle_elongation","termid":"PBO:0034472"}


id: PBO:0004930
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.284","termid":"PBO:0004930"}


id: GO:0032299
data:
  {"annotated_genes":["SJAG_00400","SJAG_02039","SJAG_01884"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84439,94228,99048],"is_not":false,"summary":null,"term":"GO:0032299"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses ribonuclease H activity, in which the catalytic subunit is a member of the RNase H2 (or HII) class. For example, in Saccharomyces the complex contains Rnh201p, Rnh202p and Rnh203p.","definition_xrefs":["PMID:14734815","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00400":null,"SJAG_01884":null,"SJAG_02039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ribonuclease H2 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNase H2 complex","type":"exact"}],"termid":"GO:0032299","terms_by_termid":{"GO:0032299":null}}


id: PBO:0059114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motile sperm domain containing 3","termid":"PBO:0059114"}


id: PR:Q9P7J1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional protein swt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.15","synonyms":[{"name":"Spom972h-swt1","type":"exact"}],"termid":"PR:Q9P7J1"}


id: PBO:0001154
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named from cerevisiae","termid":"PBO:0001154"}


id: SO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Dictyostelium intermediate repeat sequence (DIRS) retrotransposons are members of the YR_retrotransposon (SO:0002286) superfamily with the following protein domains: RT, RH, YR, and MT. RT is a reverse transcriptase. RH is RNAse H. YR is tyrosine recombinase. MT is DNA N-6-adenine-methyltransferase.","definition_xrefs":["PMID:24086727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"YR_retrotransposon","termid":"SO:0002286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRS_YR_retrotransposon","synonyms":[{"name":"DIRS YR retrotransposon","type":"exact"},{"name":"DIRS retrotransposon","type":"exact"},{"name":"RYD retrotransposon","type":"exact"}],"termid":"SO:0002287"}


id: GO:0106123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large membrane-bound endocytic organelle present only in members of the Schizotrypanum subgenus of the Trypanosoma genus and is defined as the site of storage of endocytosed macromolecules and lysosomal enzymes. It is found at the posterior end of epimastigote forms of Trypanosoma cruzi, but absent in amastigotes and trypomastigotes.","definition_xrefs":["PMID:21818313","GOC:ach","PMID:15521631","PMID:19288526","PMID:1845219","PMID:22425988","PMID:12204365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"storage vacuole","termid":"GO:0000322"},{"relation_name":"is_a","term_name":"lytic vacuole","termid":"GO:0000323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"reservosome","termid":"GO:0106123"}


id: PBO:0081927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 969, pseudogene","termid":"PBO:0081927"}


id: PBO:0113510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I membrane protein involved in autophagy and the Cvt pathway; targeted to vacuole via AP-3 pathway","termid":"PBO:0113510"}


id: GO:0043299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules by a leukocyte.","definition_xrefs":["GO_REF:0000022","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"leukocyte degranulation","synonyms":[{"name":"immune cell degranulation","type":"exact"},{"name":"immune cell granule exocytosis","type":"exact"},{"name":"leucocyte degranulation","type":"exact"},{"name":"leukocyte granule exocytosis","type":"exact"}],"termid":"GO:0043299"}


id: PBO:0001345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor TFIIS","termid":"PBO:0001345"}


id: GO:0001820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a cell. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesised in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells.","definition_xrefs":["ISBN:0198506732","ISBN:0781735149","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin transport","termid":"GO:0006837"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"serotonin secretion","synonyms":[{"name":"5-HT secretion","type":"exact"},{"name":"5-hydroxytryptamine secretion","type":"exact"},{"name":"serotonin release","type":"related"}],"termid":"GO:0001820"}


id: GO:0006305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of alkyl groups to many positions on all four bases of DNA. Alkylating agents can also modify the bases of incoming nucleotides in the course of DNA synthesis.","definition_xrefs":["ISBN:0716735970"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA alkylation (obsolete GO:0006305)","termid":"GO:0006305"}


id: GO:0016274
data:
  {"annotated_genes":["SJAG_02271","SJAG_02756","SJAG_03548","SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108762],"is_not":false,"summary":null,"term":"GO:0016274"},{"annotations":[100627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008469"},{"annotations":[91095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019702"},{"annotations":[108763,96524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035242"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (protein)-arginine = S-adenosyl-L-homocysteine + (protein)-N-methyl-arginine.","definition_xrefs":["PMID:31284549","GOC:mah","PMID:12351636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"arginine N-methyltransferase activity","termid":"GO:0016273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_02271":null,"SJAG_02756":null,"SJAG_03548":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0008276","GO:0003824","GO:0003674","GO:0016740","GO:0140096","GO:0016741"],"is_obsolete":false,"name":"protein-arginine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5205820","Reactome:R-HSA-5205824","Reactome:R-HSA-8934735","Reactome:R-HSA-5205867","Reactome:R-HSA-5205798","Reactome:R-HSA-5229010","Reactome:R-HSA-5218952","Reactome:R-HSA-5229203","Reactome:R-HSA-191790","Reactome:R-HSA-5661126","Reactome:R-HSA-5205822","Reactome:R-HSA-8879123"],"synonyms":[{"name":"PRMT activity","type":"exact"}],"termid":"GO:0016274","terms_by_termid":{"GO:0008469":null,"GO:0016274":null,"GO:0019702":null,"GO:0035242":null}}


id: PBO:0060574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 10","termid":"PBO:0060574"}


id: PBO:0005867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-specific polypeptide Pc","termid":"PBO:0005867"}


id: PBO:0000783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucosidase (predicted)","termid":"PBO:0000783"}


id: GO:0015709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of thiosulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"thiosulfate transport","synonyms":[{"name":"thiosulphate transport","type":"exact"}],"termid":"GO:0015709"}


id: GO:0006573
data:
  {"annotated_genes":["SJAG_06635","SJAG_03985","SJAG_00396","SJAG_04098","SJAG_02496","SJAG_04149","SJAG_00944"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902114"},{"annotations":[109357,86799,106532,99401,107189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009099"},{"annotations":[104183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving valine, 2-amino-3-methylbutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid metabolic process","termid":"GO:0009081"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_00944":null,"SJAG_02496":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"valine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"valine metabolism","type":"exact"}],"termid":"GO:0006573","terms_by_termid":{"GO:0006574":null,"GO:0009099":null,"GO:1902114":null}}


id: GO:0034417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2,3-bisphosphoglycerate + H2O = (2R)-2-phosphoglycerate + phosphate.","definition_xrefs":["GOC:mah","PMID:18413611","RHEA:27381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"bisphosphoglycerate 3-phosphatase activity","secondary_identifiers":["EC:3.1.3.80","KEGG_REACTION:R09532","MetaCyc:RXN-11102"],"synonyms":[{"name":"2,3-bisphospho-D-glycerate 3-phosphohydrolase activity","type":"related"}],"termid":"GO:0034417"}


id: PBO:0041843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 23","termid":"PBO:0041843"}


id: PBO:0062997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 3","termid":"PBO:0062997"}


id: PBO:0026931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_oscillating_nucleus","termid":"PBO:0026931"}


id: GO:1902759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving Mo(VI)-molybdopterin cytosine dinucleotide.","definition_xrefs":["PMID:23201473","GOC:TermGenie","GO_REF:0000068","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"Mo(VI)-molybdopterin cytosine dinucleotide metabolic process","synonyms":[{"name":"Mo(VI)-molybdopterin cytosine dinucleotide metabolism","type":"exact"}],"termid":"GO:1902759"}


id: PBO:0083981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamate decarboxylase; converts glutamate into gamma-aminobutyric acid (GABA) during glutamate catabolism; involved in response to oxidative stress","termid":"PBO:0083981"}


id: PBO:0076436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 12","termid":"PBO:0076436"}


id: PBO:0053850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1119","termid":"PBO:0053850"}


id: PBO:0084269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0084269"}


id: PBO:0062787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORC1 pseudogene 1","termid":"PBO:0062787"}


id: GO:0003155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor that contributes to the determination of lateral mesoderm left/right asymmetry.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:0003155)","synonyms":[{"name":"BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:0003155"}


id: PATO:0000435
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000435 pattern value (obsolete PATO:0000435)","termid":"PATO:0000435"}


id: PBO:0067420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 538, pseudogene","termid":"PBO:0067420"}


id: PBO:0053003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit gamma 2","termid":"PBO:0053003"}


id: GO:0045005
data:
  {"annotated_genes":["SJAG_04855","SJAG_05012","SJAG_02908","SJAG_01644","SJAG_01832","SJAG_01221","SJAG_02439","SJAG_02465","SJAG_00623","SJAG_03097","SJAG_02079","SJAG_06022","SJAG_02610","SJAG_02698","SJAG_00935","SJAG_04971","SJAG_01677","SJAG_04183","SJAG_01374","SJAG_01410","SJAG_02822","SJAG_00177","SJAG_02294","SJAG_01044","SJAG_01185","SJAG_02992","SJAG_02818","SJAG_00573","SJAG_03997","SJAG_04272","SJAG_00727","SJAG_03843","SJAG_05237","SJAG_01572","SJAG_05372","SJAG_02039","SJAG_02724","SJAG_00247","SJAG_01076","SJAG_03898","SJAG_03728","SJAG_05180","SJAG_02198","SJAG_03780","SJAG_04671","SJAG_02299"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93268,108836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902298"},{"annotations":[105205,103442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045004"},{"annotations":[94230],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070716"},{"annotations":[107855,105223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990505"},{"annotations":[103856,105180,103832,105651,108616,94356,87058,112898,92286,85290,91177,95048,90931,92123,95165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990426"},{"annotations":[99332],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[98381,102723,104611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043111"},{"annotations":[104612,102724,95461,99333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[95462,111112,98382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[95463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[98383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"},{"annotations":[113190,87061,92126,103857,93606,102725,113525,90716,108618,97624,95475,95167,104247,105182,95384,85292,85719,101821,104613,108619,96748,100258,92287,97273,110378,112899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031297"},{"annotations":[108620,100259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071932"},{"annotations":[94232],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990516"},{"annotations":[92797,112900,106060,92288,85720,85293,95168,87637,105653,111600,95050,110379],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120290"}]},"cv_name":"biological_process","definition":"A DNA metabolic process that prevents or corrects errors to ensure that DNA is replicated accurately. Errors can be corrected either by intrinsic DNA polymerase proofreading activity or via mismatch repair.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00177":null,"SJAG_00247":null,"SJAG_00573":null,"SJAG_00623":null,"SJAG_00727":null,"SJAG_00935":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01185":null,"SJAG_01221":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01572":null,"SJAG_01644":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02039":null,"SJAG_02079":null,"SJAG_02198":null,"SJAG_02294":null,"SJAG_02299":null,"SJAG_02439":null,"SJAG_02465":null,"SJAG_02610":null,"SJAG_02698":null,"SJAG_02724":null,"SJAG_02818":null,"SJAG_02822":null,"SJAG_02908":null,"SJAG_02992":null,"SJAG_03097":null,"SJAG_03728":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03898":null,"SJAG_03997":null,"SJAG_04183":null,"SJAG_04272":null,"SJAG_04671":null,"SJAG_04855":null,"SJAG_04971":null,"SJAG_05012":null,"SJAG_05180":null,"SJAG_05237":null,"SJAG_05372":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA-templated DNA replication maintenance of fidelity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-dependent DNA replication maintenance of fidelity","type":"exact"},{"name":"maintenance of fidelity during DNA-dependent DNA replication","type":"related"},{"name":"maintenance of fidelity involved in DNA-dependent DNA replication","type":"exact"}],"termid":"GO:0045005","terms_by_termid":{"GO:0011000":null,"GO:0031297":null,"GO:0031582":null,"GO:0043111":null,"GO:0045004":null,"GO:0070716":null,"GO:0071807":null,"GO:0071932":null,"GO:0090001":null,"GO:0120290":null,"GO:1902298":null,"GO:1902681":null,"GO:1990426":null,"GO:1990505":null,"GO:1990516":null}}


id: PBO:0034213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_mimicry_relationship_with","termid":"PBO:0034213"}


id: FYPO:0004187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein export from the nucleus does not occur during a cellular response to hydroxyurea. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein export from nucleus","termid":"FYPO:0001921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein export from nucleus during cellular response to hydroxyurea","synonyms":[{"name":"abolished protein export from nucleus during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"absent protein export from nucleus during cellular response to hydroxyurea","type":"exact"},{"name":"protein export from nucleus abolished during cellular response to hydroxyurea","type":"exact"},{"name":"protein export from nucleus abolished during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0004187"}


id: RO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is in taxon y if an only if y is an organism, and the relationship between x and y is one of: part of (reflexive), developmentally preceded by, derives from, secreted by, expressed.","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_taxon","termid":"RO:0002162"}


id: PBO:0045679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 2 light intermediate chain 1","termid":"PBO:0045679"}


id: PBO:0039744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L6","termid":"PBO:0039744"}


id: PBO:0070951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 6","termid":"PBO:0070951"}


id: PBO:0045294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 46","termid":"PBO:0045294"}


id: PBO:0112694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyldihydroxybenzoate methyltransferase Coq3","termid":"PBO:0112694"}


id: GO:0045129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction does not require the presence of NAD, and represents the removal of an acetyl group from a histone.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity","termid":"GO:0004407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0033558"}],"interesting_parent_ids":["GO:0016810","GO:0140096","GO:0003674","GO:0003824","GO:0016787","GO:0033558","GO:0019213"],"is_obsolete":false,"name":"NAD-independent histone deacetylase activity","synonyms":[{"name":"AcuC","type":"related"}],"termid":"GO:0045129"}


id: PBO:0057855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3166","termid":"PBO:0057855"}


id: GO:0052350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates induced systemic resistance in the symbiont; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of induced systemic resistance in symbiont (obsolete GO:0052350)","synonyms":[{"name":"activation by organism of ISR in symbiont","type":"exact"},{"name":"activation by organism of induced systemic resistance in symbiont","type":"exact"},{"name":"induction by organism of ISR in symbiont","type":"exact"},{"name":"induction by organism of induced systemic resistance in symbiont","type":"exact"}],"termid":"GO:0052350"}


id: PBO:0053111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCMT1 antisense RNA 2","termid":"PBO:0053111"}


id: GO:0010875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cholesterol efflux. Cholesterol efflux is the directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol efflux","termid":"GO:0010874"},{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"positively_regulates","term_name":"cholesterol efflux","termid":"GO:0033344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholesterol efflux","termid":"GO:0010875"}


id: PBO:0082825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved peptide N-glycanase; deglycosylating enzyme that cleaves N-glycans that are attached to misfolded ERAD substrate glycoproteins prior to proteasome-dependent degradation; localizes to the cytoplasm and nucleus; activity is enhanced by interaction with Rad23p; human ortholog NGLY1 is associated with a syndrome characterized by developmental delays, epilepsy, absence of tears and liver disease","termid":"PBO:0082825"}


id: GO:0090735
data:
  {"annotated_genes":["SJAG_03221","SJAG_01410","SJAG_02267","SJAG_04530","SJAG_00757","SJAG_01708","SJAG_02079","SJAG_02708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92281,95157,106391,98296,88763,96643,103759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000730"},{"annotations":[93028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[103764,106397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a DNA repair complex.","definition_xrefs":["GOC:pg","PMID:27233470","PMID:27113759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_04530":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"DNA repair complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090735","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0010772":null}}


id: PBO:0067030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 43, pseudogene","termid":"PBO:0067030"}


id: PBO:0076182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 6B member 2, pseudogene","termid":"PBO:0076182"}


id: PBO:0040262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 16 like 1","termid":"PBO:0040262"}


id: SO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"CDS region corresponding to a transit peptide region of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transit_peptide_region_of_CDS","synonyms":[{"name":"INSDC_feature:transit_peptide","type":"exact"},{"name":"transit peptide region of CDS","type":"exact"}],"termid":"SO:0002252"}


id: FYPO:0004915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the sequence of the telomeric repeating unit is normal (i.e. identical to that found in wild type).","definition_xrefs":["PomBase:mah","PMID:18157152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal telomeric repeat sequence","termid":"FYPO:0004915"}


id: PR:Q10296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22H10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.02","synonyms":[{"name":"Spom972h-SPAC22H10.02","type":"exact"}],"termid":"PR:Q10296"}


id: GO:1900056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leaf senescence.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of leaf senescence","termid":"GO:1900055"},{"relation_name":"negatively_regulates","term_name":"leaf senescence","termid":"GO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leaf senescence","synonyms":[{"name":"down regulation of leaf senescence","type":"related"},{"name":"down-regulation of leaf senescence","type":"related"},{"name":"downregulation of leaf senescence","type":"related"},{"name":"inhibition of leaf senescence","type":"related"}],"termid":"GO:1900056"}


id: PBO:0069580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 854, pseudogene","termid":"PBO:0069580"}


id: GO:0042397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphagen, any of a group of guanidine phosphates that occur in muscle and can be used to regenerate ATP from ADP during muscular contraction.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphagen metabolic process","termid":"GO:0006599"},{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphagen catabolic process","synonyms":[{"name":"phosphagen breakdown","type":"exact"},{"name":"phosphagen catabolism","type":"exact"},{"name":"phosphagen degradation","type":"exact"}],"termid":"GO:0042397"}


id: GO:0016226
data:
  {"annotated_genes":["SJAG_04016","SJAG_01063","SJAG_03701","SJAG_02497","SJAG_02866","SJAG_01417","SJAG_02994","SJAG_02306","SJAG_02495","SJAG_01615","SJAG_02895","SJAG_01238","SJAG_00066","SJAG_02457","SJAG_04397","SJAG_00894","SJAG_03862","SJAG_03222","SJAG_00186","SJAG_00532","SJAG_00972","SJAG_00455","SJAG_04014"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67743,85392,89051,96132,100851,110854],"is_not":false,"summary":null,"term":"GO:0016226"},{"annotations":[89049,109977,85044,105781,102972,94371,105972,97708,95342,89282,99207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044571"},{"annotations":[95034,105959,113927,110832,88872,97709,105343,84356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044572"}]},"cv_name":"biological_process","definition":"The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:mah","GOC:pde","GOC:jl","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallo-sulfur cluster assembly","termid":"GO:0031163"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00066":null,"SJAG_00186":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_00972":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_01417":null,"SJAG_01615":null,"SJAG_02306":null,"SJAG_02457":null,"SJAG_02495":null,"SJAG_02497":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03701":null,"SJAG_03862":null,"SJAG_04014":null,"SJAG_04016":null,"SJAG_04397":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"iron-sulfur cluster assembly","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"iron-sulfur cluster biosynthesis","type":"related"},{"name":"iron-sulphur cluster assembly","type":"exact"}],"termid":"GO:0016226","terms_by_termid":{"GO:0016226":null,"GO:0044571":null,"GO:0044572":null}}


id: GO:0140968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of various organic cations in exchange for a proton, according to the reaction: H+(out) + organic cation(in) = H+(in) + organic cation(out). The transported substrates are usually toxic molecules, drugs and xenobiotics.","definition_xrefs":["PMID:17509534","PMID:17047166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"polyspecific organic cation:proton antiporter activity","secondary_identifiers":["TC:2.A.66.1.20"],"synonyms":[{"name":"proton:polyspecific organic cation antiporter activity","type":"related"}],"termid":"GO:0140968"}


id: PBO:0034200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_ubiquitination","termid":"PBO:0034200"}


id: GO:0070147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling cysteine to cysteinyl-tRNA in a mitochondrion, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteinyl-tRNA aminoacylation","termid":"GO:0006423"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006399","GO:0140053","GO:0010467","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"mitochondrial cysteinyl-tRNA aminoacylation","termid":"GO:0070147"}


id: PBO:0028707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_double-strand_break_sites_during_meiotic_cell_cycle","termid":"PBO:0028707"}


id: PBO:0040720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL9 pseudogene 1","termid":"PBO:0040720"}


id: FYPO:0009040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tea tree oil than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to tea tree oil","synonyms":[{"name":"resistance to tea tree oil during mitotic cell cycle","type":"related"},{"name":"resistance to tea tree oil during vegetative growth","type":"exact"},{"name":"resistant to tea tree oil","type":"exact"}],"termid":"FYPO:0009040"}


id: PBO:0075912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 4","termid":"PBO:0075912"}


id: PBO:0039868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 27 pseudogene 2","termid":"PBO:0039868"}


id: GO:0033262
data:
  {"annotated_genes":["SJAG_03438","SJAG_03720","SJAG_03695","SJAG_04671","SJAG_00364","SJAG_02074","SJAG_04623","SJAG_02162","SJAG_01068","SJAG_03160","SJAG_01210","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112942,104987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[104988,85483,93883,98475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[113358,99428,108134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[102709,98480,85185,112331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[98484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[95460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903466"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of The DNA-dependent DNA replication that occurs in the nucleus of eukaryotic organisms as part of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"regulates","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01068":null,"SJAG_01210":null,"SJAG_02074":null,"SJAG_02162":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_04623":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of nuclear cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA replication during S phase","type":"related"},{"name":"regulation of DNA replication involved in S phase","type":"exact"},{"name":"regulation of DNA replication involved in S-phase","type":"exact"}],"termid":"GO:0033262","terms_by_termid":{"GO:1903464":null,"GO:1903465":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1904514":null}}


id: PBO:0079967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 5","termid":"PBO:0079967"}


id: PBO:0046409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPCAM divergent transcript","termid":"PBO:0046409"}


id: FYPO:0004123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glutathione disulfide oxidoreductase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal glutathione disulfide oxidoreductase activity","termid":"FYPO:0004123"}


id: PBO:0047101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM151B divergent transcript","termid":"PBO:0047101"}


id: PBO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"identified in S. pombe only","termid":"PBO:0000067"}


id: GO:0070025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to carbon monoxide (CO).","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"carbon monoxide binding","synonyms":[{"name":"CO binding","type":"exact"}],"termid":"GO:0070025"}


id: PBO:0083341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene APM2/YHL019C","termid":"PBO:0083341"}


id: GO:0016964
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with alpha-2 macroglobulin and delivering alpha-2 macroglobulin into the cell via receptor-mediated endocytosis.","definition_xrefs":["GOC:bf","GOC:ma","PMID:6188403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"alpha-2 macroglobulin receptor activity","termid":"GO:0016964"}


id: PBO:0072573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase regulatory TP53 inducible subunit M2B","termid":"PBO:0072573"}


id: SO:0000914
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone insert made from genomic DNA.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"genomic_DNA","termid":"SO:0000991"},{"relation_name":"is_a","term_name":"clone_insert","termid":"SO:0000753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cloned_genomic_insert","synonyms":[{"name":"cloned genomic insert","type":"exact"}],"termid":"SO:0000914"}


id: PBO:0054201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1581","termid":"PBO:0054201"}


id: PBO:0083404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YBR126W-A; identified by SAGE","termid":"PBO:0083404"}


id: PATO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having the shape of an incisor tooth.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/incisiform"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharp","termid":"PATO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incisiform","termid":"PATO:0002209"}


id: PR:P40375
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NAD-dependent malic enzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent malic enzyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.12c","secondary_identifiers":["UniProtKB:P40375"],"synonyms":[{"name":"NAD-ME (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-maeA","type":"exact"}],"termid":"PR:P40375"}


id: GO:0009088
data:
  {"annotated_genes":["SJAG_00234","SJAG_00881","SJAG_00432","SJAG_03141","SJAG_03152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96939,102077,106768,108066,111873],"is_not":false,"summary":null,"term":"GO:0009088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"threonine metabolic process","termid":"GO:0006566"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00432":null,"SJAG_00881":null,"SJAG_03141":null,"SJAG_03152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"threonine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HOMOSER-THRESYN-PWY","MetaCyc:THRESYN-PWY"],"synonyms":[{"name":"threonine formation","type":"exact"},{"name":"threonine synthesis","type":"exact"},{"name":"threonine anabolism","type":"exact"},{"name":"threonine biosynthesis","type":"exact"}],"termid":"GO:0009088","terms_by_termid":{"GO:0009088":null}}


id: PBO:0050691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 18","termid":"PBO:0050691"}


id: GO:0043758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetate + CoA = ADP + phosphate + acetyl-CoA.","definition_xrefs":["RHEA:15081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"acetate-CoA ligase (ADP-forming) activity","secondary_identifiers":["MetaCyc:ACETATE--COA-LIGASE-ADP-FORMING-RXN","GO:0043762","EC:6.2.1.13"],"synonyms":[{"name":"acetate thiokinase activity","type":"broad"},{"name":"acetate--CoA ligase (ADP-forming) activity","type":"exact"},{"name":"acetate:CoA ligase (ADP-forming)","type":"related"},{"name":"acetyl coenzyme A synthetase (adenosine diphosphate-forming)","type":"exact"},{"name":"acetyl-CoA synthetase (ADP-forming) activity","type":"related"},{"name":"aryl-CoA synthetase (ADP-forming) activity","type":"related"}],"termid":"GO:0043758"}


id: PATO:0002308
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A triangular quality inhering in a bearer by virtue of the bearer's having all sides of unequal length.","definition_xrefs":["PATOC:JB"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scalene triangular","termid":"PATO:0002308"}


id: PBO:0090645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Gup1","termid":"PBO:0090645"}


id: PBO:0069537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 807, pseudogene","termid":"PBO:0069537"}


id: PBO:0056244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium transporter 1","termid":"PBO:0056244"}


id: GO:0002389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the Peyer's patches.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response in Peyer's patch","termid":"GO:0002388"},{"relation_name":"is_a","term_name":"tolerance induction in gut-associated lymphoid tissue","termid":"GO:0002394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction in Peyer's patch","termid":"GO:0002389"}


id: PBO:0056214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B16","termid":"PBO:0056214"}


id: GO:0016414
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an octanoyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"octanoyltransferase activity","termid":"GO:0016415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"O-octanoyltransferase activity","termid":"GO:0016414"}


id: PBO:0075699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing regulatory glutamic acid and lysine rich protein 1","termid":"PBO:0075699"}


id: PBO:0002603
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.3.5","termid":"PBO:0002603"}


id: PR:P87299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug74 gene.","definition_xrefs":["UniProtKB:P87299","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 74 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.08c","synonyms":[{"name":"Spom972h-mug74","type":"exact"}],"termid":"PR:P87299"}


id: GO:0102935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + gypsogenin = gypsogenin-28-beta-D-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gypsogenin-UDP-glucosyltransferase activity (obsolete GO:0102935)","termid":"GO:0102935"}


id: PBO:0017842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione transmembrane transporter Pgt1","termid":"PBO:0017842"}


id: CHEBI:16414
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine","termid":"CHEBI:16414"}


id: FYPO:0007727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of late endosomes is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system morphology","termid":"FYPO:0000353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal late endosome morphology","synonyms":[{"name":"abnormal PVE morphology","type":"exact"},{"name":"abnormal late endosome morphology during mitotic cell cycle","type":"related"},{"name":"abnormal late endosome morphology during vegetative growth","type":"exact"},{"name":"abnormal prevacuolar compartment morphology","type":"exact"},{"name":"abnormal prevacuolar endosome morphology","type":"exact"}],"termid":"FYPO:0007727"}


id: GO:1900751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a 4-(trimethylammonio)butanoate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","PMID:16365044","PMID:20357772","PMID:20829798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino-acid betaine transport","termid":"GO:0015838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"4-(trimethylammonio)butanoate transport","synonyms":[{"name":"4-(N-trimethylamino)butyrate transport","type":"exact"},{"name":"4-butyrobetaine transport","type":"exact"},{"name":"Actinine transport","type":"related"},{"name":"C7H15NO2 transport","type":"related"},{"name":"butyrobetaine transport","type":"related"},{"name":"deoxycarnitine transport","type":"related"},{"name":"gamma-Butyrobetain transport","type":"exact"},{"name":"gamma-butyrobetaine transport","type":"exact"}],"termid":"GO:1900751"}


id: FYPO:0007448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the endoplasmic reticulum is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:32735772","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"},{"relation_name":"is_a","term_name":"abnormal macroautophagy during nitrogen starvation","termid":"FYPO:0004670"},{"relation_name":"is_a","term_name":"abnormal reticulophagy","termid":"FYPO:0008083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"normal reticulophagy during nitrogen starvation","synonyms":[{"name":"normal ER autophagy during nitrogen starvation","type":"exact"},{"name":"normal ER degradation during nitrogen starvation","type":"related"},{"name":"normal ER-phagy during nitrogen starvation","type":"exact"},{"name":"normal endoplasmic reticulum autophagy during nitrogen starvation","type":"exact"},{"name":"normal reticulophagy during nitrogen depletion","type":"exact"},{"name":"normal reticulophagy during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0007448"}


id: PBO:0044252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWC27 spliceosome associated cyclophilin","termid":"PBO:0044252"}


id: PBO:0059462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutS homolog 2","termid":"PBO:0059462"}


id: PR:Q9UTD6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yea6 gene.","definition_xrefs":["UniProtKB:Q9UTD6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C227.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.03c","synonyms":[{"name":"Spom972h-yea6","type":"exact"}],"termid":"PR:Q9UTD6"}


id: PBO:0027768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_curved_mitotic_spindle_during_anaphase","termid":"PBO:0027768"}


id: FYPO:0002933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature snoRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered snoRNA or precursor level","termid":"FYPO:0005998"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased mature snoRNA level","synonyms":[{"name":"increased mature small nucleolar RNA level","type":"exact"},{"name":"increased mature snoRNA accumulation","type":"related"},{"name":"increased mature snoRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature snoRNA level during vegetative growth","type":"exact"},{"name":"increased mature snoRNA transcript level","type":"broad"},{"name":"increased snoRNA level","type":"broad"}],"termid":"FYPO:0002933"}


id: GO:0097032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex II, a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex II biogenesis (obsolete GO:0097032)","termid":"GO:0097032"}


id: PBO:0045254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1","termid":"PBO:0045254"}


id: PBO:0076614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 32","termid":"PBO:0076614"}


id: PBO:0049672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 4","termid":"PBO:0049672"}


id: GO:0120012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of sphingolipids between membranes in which a sphingolipid molecule is transported through an aqueous phase from the outer leaflet of a donor membrane to the outer leaflet of an acceptor membrane. This process does not require metabolic energy and can be either spontaneous or mediated by lipid transfer proteins (LTPs).","definition_xrefs":["GOC:krc","PMID:20823909","PMID:25797198","PMID:24220498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"intermembrane lipid transfer","termid":"GO:0120009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"intermembrane sphingolipid transfer","termid":"GO:0120012"}


id: GO:0062196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of a lysosome.","definition_xrefs":["PMID:31314175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lysosome size","termid":"GO:0062196"}


id: PBO:0080529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH complex subunit 2A","termid":"PBO:0080529"}


id: GO:1902953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ER to Golgi vesicle-mediated transport.","definition_xrefs":["GO_REF:0000058","GOC:sjp","PMID:17855360","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of ER to Golgi vesicle-mediated transport","termid":"GO:0060628"},{"relation_name":"positively_regulates","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ER to Golgi vesicle-mediated transport","synonyms":[{"name":"activation of ER to Golgi transport","type":"narrow"},{"name":"activation of ER to Golgi vesicle-mediated transport","type":"narrow"},{"name":"activation of endoplasmic reticulum to Golgi transport","type":"narrow"},{"name":"activation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"narrow"},{"name":"activation of rough ER to cis-Golgi transport","type":"narrow"},{"name":"activation of rough ER to cis-Golgi vesicle-mediated transport","type":"narrow"},{"name":"activation of rough endoplasmic reticulum to cis-Golgi transport","type":"narrow"},{"name":"activation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"narrow"},{"name":"positive regulation of ER to Golgi transport","type":"exact"},{"name":"positive regulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"positive regulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"positive regulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"positive regulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"positive regulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"positive regulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of ER to Golgi transport","type":"exact"},{"name":"up regulation of ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"up regulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"up regulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"up regulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of ER to Golgi transport","type":"exact"},{"name":"up-regulation of ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"up-regulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"up-regulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"up-regulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of ER to Golgi transport","type":"exact"},{"name":"upregulation of ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"upregulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"upregulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"upregulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"}],"termid":"GO:1902953"}


id: PBO:0038955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adiponectin receptor 1 pseudogene 2","termid":"PBO:0038955"}


id: PBO:0067600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 763, pseudogene","termid":"PBO:0067600"}


id: PBO:0001382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 family co-repressor","termid":"PBO:0001382"}


id: GO:0106393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"}


id: PBO:0047034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 98 member B","termid":"PBO:0047034"}


id: FYPO:0007612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more STREP motifs occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased transcription from STREP promoter","synonyms":[{"name":"decreased transcription from STREP promoter during mitotic cell cycle","type":"related"},{"name":"decreased transcription from STREP promoter during vegetative growth","type":"exact"},{"name":"reduced transcription from STREP promoter","type":"exact"}],"termid":"FYPO:0007612"}


id: FYECO:0000155
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which choline was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ choline","termid":"FYECO:0000155"}


id: PBO:0070239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 179 pseudogene","termid":"PBO:0070239"}


id: PBO:0040417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c pseudogene 2","termid":"PBO:0040417"}


id: PBO:0058414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4783","termid":"PBO:0058414"}


id: PBO:0002567
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the sequence previously referred to as SPAC27D7.10c was a duplication caused by missassembly of the cosmid","termid":"PBO:0002567"}


id: PBO:0039305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALK and LTK ligand 2","termid":"PBO:0039305"}


id: PBO:0072229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 4","termid":"PBO:0072229"}


id: GO:0141193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a signaling molecule binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:25614732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular receptor signaling pathway","termid":"GO:0030522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nuclear receptor-mediated signaling pathway","synonyms":[{"name":"nuclear receptor signaling pathway","type":"exact"}],"termid":"GO:0141193"}


id: MOD:00250
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-lysine residue to form L-lysine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:1880060","RESID:AA0245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1,5-diaminopentyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1,5-bis(azanyl)pentyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"L-lysine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00250"}


id: GO:0080122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of AMP, adenosine monophosphate, from one side of a membrane to the other.","definition_xrefs":["PMID:18923018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transmembrane transporter activity","termid":"GO:0000295"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"AMP transmembrane transporter activity","synonyms":[{"name":"adenosine monophosphate transmembrane transporter activity","type":"exact"}],"termid":"GO:0080122"}


id: GO:1900448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of pyrimidine nucleotide biosynthesis by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900448)","termid":"GO:1900448"}


id: GO:0048102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death that is accompanied by the formation of autophagosomes. Autophagic cell death is characterized by lack of chromatin condensation and massive vacuolization of the cytoplasm, with little or no uptake by phagocytic cells.","definition_xrefs":["GOC:autophagy","GOC:mah","PMID:18846107","PMID:23347517","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autophagic cell death","synonyms":[{"name":"autophagic death","type":"broad"},{"name":"autosis","type":"related"},{"name":"programmed cell death by autophagy","type":"broad"},{"name":"programmed cell death by macroautophagy","type":"exact"},{"name":"type II programmed cell death","type":"related"}],"termid":"GO:0048102"}


id: PBO:0076085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid sulfatase","termid":"PBO:0076085"}


id: GO:0060262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate frequency or extent of the covalent attachment of a palmitoyl group to the N-terminal amino acid residue of a protein.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of N-terminal protein palmitoylation","termid":"GO:0060254"},{"relation_name":"is_a","term_name":"negative regulation of protein lipidation","termid":"GO:1903060"},{"relation_name":"negatively_regulates","term_name":"N-terminal protein palmitoylation","termid":"GO:0006500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of N-terminal protein palmitoylation","termid":"GO:0060262"}


id: PBO:0054578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1980","termid":"PBO:0054578"}


id: PBO:0060021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 9","termid":"PBO:0060021"}


id: PBO:0043019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHM Rab escort protein","termid":"PBO:0043019"}


id: FYPO:0000662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a specified catalytic activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"increased catalytic activity","termid":"FYPO:0000662"}


id: PBO:0079385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 2A class IIa","termid":"PBO:0079385"}


id: GO:0047242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a hydroxyanthraquinone + UDP-D-glucose = a glucosyloxyanthraquinone + UDP.","definition_xrefs":["EC:2.4.1.181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"hydroxyanthraquinone glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.181-RXN"],"synonyms":[{"name":"UDP-glucose:hydroxyanthraquinone O-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:hydroxyanthraquinone O-glucosyltransferase activity","type":"related"},{"name":"anthraquinone-specific glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-anthraquinone glucosyltransferase activity","type":"related"}],"termid":"GO:0047242"}


id: PBO:0042967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 5","termid":"PBO:0042967"}


id: GO:0106234
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any protein complex that is part of the bacterial outer membrane. An example In E.coli, is RcsF associated with any one of several outer membrane beta-barrel proteins (OMPs), such as OmpA, OmpF, or OmpcC.","definition_xrefs":["PMID:25267629","GOC:am","PMID:27282389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"outer membrane protein complex","termid":"GO:0106234"}


id: PBO:0017866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug168","termid":"PBO:0017866"}


id: GO:0141126
data:
  {"annotated_genes":["SJAG_00944"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003860"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a short-chain fatty acyl-CoA + H2O = a short fatty acid + CoA + H+. A short-chain fatty acid has an aliphatic tail of less than 6 carbons.","definition_xrefs":["RHEA:68180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"short-chain fatty acyl-CoA hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.2.18","MetaCyc:3.1.2.18-RXN"],"termid":"GO:0141126","terms_by_termid":{"GO:0003860":null}}


id: PBO:0090079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate dehydrogenase (lipoamide) phosphatase","termid":"PBO:0090079"}


id: PBO:0085011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of WASP-Arp23 complex; involved in endocytic site formation; directly inhibits Las17p stimulation of Arp23 complex-mediated actin assembly in vitro; may regulate assembly and disassembly of the septin ring; colocalizes and interacts with septin subunits; potential role in actin cytoskeletal organization","termid":"PBO:0085011"}


id: PBO:0060247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCBP2 antisense RNA 2","termid":"PBO:0060247"}


id: PBO:0001311
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CLN3","termid":"PBO:0001311"}


id: PBO:0090848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar proton/calcium exchanger","termid":"PBO:0090848"}


id: FYPO:0005051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to regions of chromatin containing genes that can be transcribed by RNA polymerase II is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:20605454","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","synonyms":[{"name":"decreased protein localisation to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen depletion","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen deprivation","type":"exact"},{"name":"decreased protein localization to chromatin at polymerase II regulated genes during nitrogen starvation","type":"exact"},{"name":"reduced protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005051"}


id: PBO:0066715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 12","termid":"PBO:0066715"}


id: GO:0051195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving a cofactor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cofactor metabolic process (obsolete GO:0051195)","synonyms":[{"name":"down regulation of cofactor metabolic process","type":"exact"},{"name":"down-regulation of cofactor metabolic process","type":"exact"},{"name":"downregulation of cofactor metabolic process","type":"exact"},{"name":"inhibition of cofactor metabolic process","type":"narrow"},{"name":"negative regulation of cofactor metabolism","type":"exact"}],"termid":"GO:0051195"}


id: GO:0034910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-hydroxy-3-succinoylpyridine + H2O = succinic semialdehyde + 2,5-dihydroxypyridine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-hydroxy-3-succinoylpyridine hydrolase activity (obsolete GO:0034910)","termid":"GO:0034910"}


id: PBO:0076844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERT regulating lncRNA 1","termid":"PBO:0076844"}


id: GO:0033269
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An axon part that is located between the nodes of Ranvier and surrounded by compact myelin sheath.","definition_xrefs":["GOC:mh","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"internode region of axon","secondary_identifiers":["NIF_Subcellular:sao206157942"],"synonyms":[{"name":"internode","type":"exact"}],"termid":"GO:0033269"}


id: GO:0009838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled shedding of a body part.","definition_xrefs":["ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abscission","secondary_identifiers":["Wikipedia:Abscission"],"termid":"GO:0009838"}


id: GO:0033871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate; modifies selected glucosamine residues preceded by GlcA2S.","definition_xrefs":["EC:2.8.2.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"[heparan sulfate]-glucosamine 3-sulfotransferase 2 activity","secondary_identifiers":["MetaCyc:2.8.2.29-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:[heparan sulfate]-glucosamine 3-sulfotransferase activity","type":"broad"},{"name":"3-OST-2","type":"related"},{"name":"glucosaminyl 3-O-sulfotransferase 2 activity","type":"related"},{"name":"glucosaminyl 3-O-sulfotransferase activity","type":"broad"},{"name":"heparan sulfate D-glucosaminyl 3-O-sulfotransferase 2 activity","type":"related"},{"name":"heparan sulfate D-glucosaminyl 3-O-sulfotransferase activity","type":"broad"},{"name":"heparin-glucosamine 3-sulfotransferase 2 activity","type":"related"},{"name":"isoform/isozyme 2 (3-OST-2, HS3ST2)","type":"related"}],"termid":"GO:0033871"}


id: FYPO:0006280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of crossover formation as part of mitotic recombination is increased in centromeric regions.","definition_xrefs":["PMID:28977643","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic recombination","termid":"FYPO:0000481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased mitotic recombination with crossover formation at centromere","termid":"FYPO:0006280"}


id: PBO:0044190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin C","termid":"PBO:0044190"}


id: FYPO:0009079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of calcofluor and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to calcofluor and sodium dodecyl sulfate","synonyms":[{"name":"resistance to calcofluor and SDS","type":"exact"},{"name":"resistance to calcofluor and SDS during vegetative growth","type":"exact"},{"name":"resistance to calcofluor and SDS in combination","type":"exact"},{"name":"resistance to calcofluor and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to calcofluor and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to calcofluor and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to calcofluor and SDS","type":"exact"},{"name":"resistant to calcofluor and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009079"}


id: MOD:00053
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to N-acetyl-L-glutamic acid.","definition_xrefs":["ChEBI:17533","PubMed:6725286","RESID:AA0044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-glutamic acid","synonyms":[{"name":"(2S)-2-(acetamido)pentanedioic acid","type":"exact"},{"name":"2-(acetylamino)pentanedioic acid","type":"exact"},{"name":"2-(acetylazanyl)pentanedioic acid","type":"exact"},{"name":"AcGlu","type":"exact"},{"name":"MOD_RES N-acetylglutamate","type":"exact"},{"name":"N-acetyl-L-glutamic acid","type":"exact"},{"name":"N-acetylated L-glutamic acid","type":"exact"},{"name":"acetylglutamic acid","type":"exact"}],"termid":"MOD:00053"}


id: GO:0052603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-chloro-4-nitrosobenzene + NADPH + H+ = 1-chloro-4-hydroxylaminobenzene + NADP+ + H2O.","definition_xrefs":["MetaCyc:RXN-8834"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-chloro-4-nitrosobenzene nitroreductase activity (obsolete GO:0052603)","termid":"GO:0052603"}


id: GO:0050837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a selenide-sulfide bond to form the cystine-like L-cysteinyl-L-selenocysteine, as in vertebrate selenopeptide P.","definition_xrefs":["RESID:AA0358"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteinyl-L-selenocysteine (obsolete GO:0050837)","termid":"GO:0050837"}


id: FYPO:0008164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is abnormal during mitotic M-phase.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during vegetative growth","termid":"FYPO:0001268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore during mitotic M phase","termid":"FYPO:0008164"}


id: GO:0046456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of icosanoids, any of a group of C20 polyunsaturated fatty acids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid metabolic process","termid":"GO:0006690"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"icosanoid biosynthetic process","secondary_identifiers":["Wikipedia:Eicosanoid"],"synonyms":[{"name":"eicosanoid biosynthesis","type":"exact"},{"name":"eicosanoid biosynthetic process","type":"exact"},{"name":"eoxin biosynthesis","type":"exact"},{"name":"eoxin synthesis","type":"exact"},{"name":"icosanoid anabolism","type":"exact"},{"name":"icosanoid biosynthesis","type":"exact"},{"name":"icosanoid formation","type":"exact"},{"name":"icosanoid synthesis","type":"exact"}],"termid":"GO:0046456"}


id: PR:Q9UT94
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A HemK methyltransferase family member 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01624","PANTHER:PTHR18895:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eRF1 methyltransferase catalytic subunit mtq2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.05c","secondary_identifiers":["UniProtKB:Q9UT94"],"synonyms":[{"name":"N(5)-glutamine methyltransferase catalytic subunit mtq2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-N6AMT1","type":"exact"},{"name":"eRF1 MTase catalytic subunit mtq2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT94"}


id: PBO:0002500
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post transcriptional regulation of Tsn1 expression","termid":"PBO:0002500"}


id: GO:0018703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4-dichlorophenoxyacetic acid + H+ + 2 e- = Cl- + 4-chlorophenoxyacetate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4-dichlorophenoxyacetate dehalogenase activity (obsolete GO:0018703)","termid":"GO:0018703"}


id: GO:0033190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of double bonds in prosolanapyrone II to form (-)-solanapyrone A.","definition_xrefs":["PMID:9659400","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0009975","GO:0003824"],"is_obsolete":false,"name":"solanapyrone synthase activity","termid":"GO:0033190"}


id: PR:P52822
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl501 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P52822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L5-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.12c","synonyms":[{"name":"Spom972h-rpl501","type":"exact"}],"termid":"PR:P52822"}


id: PBO:0050938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 8","termid":"PBO:0050938"}


id: GO:0075078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The receptor is defined as a protein on the cell membrane or within the cytoplasm or cell nucleus that binds to a specific molecule (a ligand) such as a neurotransmitter or a hormone or other substance, and initiates the cellular response to the ligand. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075078)","termid":"GO:0075078"}


id: PBO:0027756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_calcium_ion","termid":"PBO:0027756"}


id: PBO:0043517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP5 divergent transcript","termid":"PBO:0043517"}


id: PBO:0092021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit 6","termid":"PBO:0092021"}


id: GO:0075053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly by the symbiont of a peg-like structure for the purpose of penetration into its host organism, which penetrates through the host cuticle and epidermal cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","PMID:26441323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration peg formation","secondary_identifiers":["GO:0075057"],"synonyms":[{"name":"formation of symbiont penetration peg for entry into host","type":"related"},{"name":"initiation of symbiont penetration peg","type":"narrow"},{"name":"symbiont penetration peg formation for entry into host","type":"related"},{"name":"symbiont penetration peg initiation","type":"narrow"}],"termid":"GO:0075053"}


id: PBO:0054235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1617","termid":"PBO:0054235"}


id: GO:0042736
data:
  {"annotated_genes":["SJAG_03946","SJAG_01566"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92568,93585],"is_not":false,"summary":null,"term":"GO:0042736"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + NADH = ADP + 2 H+ + NADPH.","definition_xrefs":["EC:2.7.1.86","RHEA:12260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01566":null,"SJAG_03946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"NADH kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00105","MetaCyc:NADH-KINASE-RXN"],"synonyms":[{"name":"ATP:NADH 2'-phosphotransferase activity","type":"related"},{"name":"DPNH kinase activity","type":"related"},{"name":"reduced diphosphopyridine nucleotide kinase activity","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide kinase (phosphorylating)","type":"related"}],"termid":"GO:0042736","terms_by_termid":{"GO:0042736":null}}


id: PBO:0074620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 20","termid":"PBO:0074620"}


id: GO:0017002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with activin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Activin is one of two gonadal glycoproteins related to transforming growth factor beta.","definition_xrefs":["GOC:signaling","ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase activity","termid":"GO:0004675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004672","GO:0038023","GO:0016740","GO:0140096","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"activin receptor activity","synonyms":[{"name":"activin-activated receptor activity","type":"exact"}],"termid":"GO:0017002"}


id: PBO:0079093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 6-1","termid":"PBO:0079093"}


id: PBO:0041546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 putative open reading frame 15","termid":"PBO:0041546"}


id: GO:0030328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of prenylcysteine, 3-methyl-2-buten-1-yl-cysteine, a derivative of the amino acid cysteine formed by the covalent addition of a prenyl residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenylcysteine metabolic process","termid":"GO:0030329"},{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prenylcysteine catabolic process","synonyms":[{"name":"prenylcysteine breakdown","type":"exact"},{"name":"prenylcysteine catabolism","type":"exact"},{"name":"prenylcysteine degradation","type":"exact"}],"termid":"GO:0030328"}


id: PBO:0045283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 34","termid":"PBO:0045283"}


id: GO:0141073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts opsonization by the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18068388","PMID:2307127","PMID:18941224","PMID:28860090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host opsonization","synonyms":[{"name":"disruption by symbiont of host opsonization","type":"exact"}],"termid":"GO:0141073"}


id: PBO:0078376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triggering receptor expressed on myeloid cells 2","termid":"PBO:0078376"}


id: PBO:0089207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein family, in between Wcy","termid":"PBO:0089207"}


id: GO:0044184
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prelysosomal endocytic organelle differentiated from host early endosomes by lower lumenal pH and different protein composition. Host late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endosome","termid":"GO:0044174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell late endosome","termid":"GO:0044184"}


id: PBO:0068577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 28, pseudogene","termid":"PBO:0068577"}


id: GO:0008275
data:
  {"annotated_genes":["SJAG_01215","SJAG_02609","SJAG_07018","SJAG_03835"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97082,104934,105699,106672],"is_not":false,"summary":null,"term":"GO:0008275"}]},"cv_name":"cellular_component","definition":"A complex usually comprising two gamma-tubulin molecules and two conserved non-tubulin proteins. Some gamma-tubulin small complexes are thought to be the repeating unit making up the core of the gamma-tubulin ring complex.","definition_xrefs":["PMID:11297925","PMID:12134075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-tubulin complex","termid":"GO:0000930"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_02609":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"gamma-tubulin small complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000927","GO:0000928","GO:0061495"],"synonyms":[{"name":"Tub4 complex","type":"narrow"},{"name":"gamma-tubulin small complex, centrosomal","type":"narrow"},{"name":"gamma-tubulin small complex, mitotic spindle pole body","type":"narrow"},{"name":"gamma-tubulin small complex, spindle pole body","type":"narrow"},{"name":"gammaTuSC","type":"exact"}],"termid":"GO:0008275","terms_by_termid":{"GO:0008275":null}}


id: GO:0047653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-(+)-allantoin = (R)-(-)-allantoin.","definition_xrefs":["RHEA:10804","EC:5.1.99.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"allantoin racemase activity","secondary_identifiers":["MetaCyc:ALLANTOIN-RACEMASE-RXN","KEGG_REACTION:R03925"],"termid":"GO:0047653"}


id: GO:0050285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-sinapoylcholine + H2O = choline + H+ + sinapate.","definition_xrefs":["EC:3.1.1.49","RHEA:10016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sinapine esterase activity","secondary_identifiers":["MetaCyc:SINAPINE-ESTERASE-RXN","KEGG_REACTION:R02381"],"synonyms":[{"name":"aromatic choline esterase activity","type":"related"},{"name":"sinapoylcholine sinapohydrolase activity","type":"related"}],"termid":"GO:0050285"}


id: PBO:0110488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor kinase PRP4K","termid":"PBO:0110488"}


id: PBO:0056398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein RP/EB family member 3","termid":"PBO:0056398"}


id: FYPO:0004017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cytochrome-c oxidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"},{"relation_name":"is_a","term_name":"normal transmembrane transporter activity","termid":"FYPO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654","FYPO:0000002","FYPO:0002114"],"is_obsolete":false,"name":"normal cytochrome-c oxidase activity","termid":"FYPO:0004017"}


id: GO:1903698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microvillus assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:als","PMID:22797597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microvillus assembly","termid":"GO:0032534"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"positively_regulates","term_name":"microvillus assembly","termid":"GO:0030033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of microvillus assembly","synonyms":[{"name":"activation of microvillus assembly","type":"narrow"},{"name":"activation of microvillus biogenesis","type":"related"},{"name":"positive regulation of microvillus biogenesis","type":"related"},{"name":"up regulation of microvillus assembly","type":"exact"},{"name":"up regulation of microvillus biogenesis","type":"related"},{"name":"up-regulation of microvillus assembly","type":"exact"},{"name":"up-regulation of microvillus biogenesis","type":"related"},{"name":"upregulation of microvillus assembly","type":"exact"},{"name":"upregulation of microvillus biogenesis","type":"related"}],"termid":"GO:1903698"}


id: GO:0010593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lamellipodium assembly","termid":"GO:0010591"},{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"negative regulation of lamellipodium organization","termid":"GO:1902744"},{"relation_name":"negatively_regulates","term_name":"lamellipodium assembly","termid":"GO:0030032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of lamellipodium assembly","synonyms":[{"name":"negative regulation of lamellipodium biogenesis","type":"related"}],"termid":"GO:0010593"}


id: GO:0019882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["PMID:15928678","GO_REF:0000022","GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation","secondary_identifiers":["GO:0030333","Wikipedia:Antigen_presentation"],"synonyms":[{"name":"antigen presentation","type":"exact"},{"name":"antigen processing","type":"exact"}],"termid":"GO:0019882"}


id: GO:0004334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate + H+.","definition_xrefs":["EC:3.7.1.2","RHEA:10244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"fumarylacetoacetase activity","secondary_identifiers":["MetaCyc:FUMARYLACETOACETASE-RXN","KEGG_REACTION:R01364","UM-BBD_reactionID:r0107","Reactome:R-HSA-71181"],"synonyms":[{"name":"4-fumarylacetoacetate fumarylhydrolase activity","type":"related"},{"name":"beta-diketonase activity","type":"related"},{"name":"fumarylacetoacetate hydrolase activity","type":"related"}],"termid":"GO:0004334"}


id: PBO:0081077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC8B, pseudogene","termid":"PBO:0081077"}


id: FYPO:0005785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs for a shorter time than normal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PMID:26882497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"decreased duration of protein-protein interaction","synonyms":[{"name":"decreased duration of protein binding","type":"exact"},{"name":"reduced duration of protein-protein interaction","type":"exact"}],"termid":"FYPO:0005785"}


id: GO:0033006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell activation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of mast cell activation","termid":"GO:0033003"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"mast cell activation involved in immune response","termid":"GO:0002279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell activation involved in immune response","synonyms":[{"name":"regulation of mast cell activation during immune response","type":"related"}],"termid":"GO:0033006"}


id: PBO:0111797
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family","termid":"PBO:0111797"}


id: GO:1902126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-pinoresinol.","definition_xrefs":["PMID:9872995","GOC:TermGenie","PMID:8910615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan biosynthetic process","termid":"GO:0009807"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"(+)-pinoresinol metabolic process","termid":"GO:1902124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-pinoresinol biosynthetic process","synonyms":[{"name":"(+)-pinoresinol anabolism","type":"exact"},{"name":"(+)-pinoresinol biosynthesis","type":"exact"},{"name":"(+)-pinoresinol formation","type":"exact"},{"name":"(+)-pinoresinol synthesis","type":"exact"}],"termid":"GO:1902126"}


id: PBO:0040841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BH3-like motif containing, cell death inducer","termid":"PBO:0040841"}


id: GO:0005808
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi-plasma membrane transport vesicle (obsolete GO:0005808)","synonyms":[{"name":"Golgi-plasma membrane transport vesicle","type":"exact"}],"termid":"GO:0005808"}


id: PR:O59779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1235.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1235.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.01","synonyms":[{"name":"Spom972h-SPCC1235.01","type":"exact"}],"termid":"PR:O59779"}


id: PR:O13762
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C17A2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.12","synonyms":[{"name":"Spom972h-rrp1","type":"exact"}],"termid":"PR:O13762"}


id: PBO:0030533
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_GTPase_activity","termid":"PBO:0030533"}


id: SO:0001293
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5-formyl-2'-O-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_formyl_two_prime_O_methylcytidine","secondary_identifiers":["RNAMOD:095"],"synonyms":[{"name":"5-formyl-2'-O-methylcytidine","type":"exact"},{"name":"f5Cm","type":"exact"},{"name":"five formyl two prime O methylcytidine","type":"exact"}],"termid":"SO:0001293"}


id: PBO:0054926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2340","termid":"PBO:0054926"}


id: PBO:0086206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with ribosomes; homolog of translationally controlled tumor protein; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and relocates to the mitochondrial outer surface upon oxidative stress; homolog of human TPT1","termid":"PBO:0086206"}


id: GO:0044520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of the activity of a vasoactive intestinal polypeptide receptor in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of vasoactive intestinal polypeptide receptor activity in another organism","termid":"GO:0044519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of VIP receptor activity in other organism","type":"exact"},{"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044520"}


id: PBO:0061221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 12","termid":"PBO:0061221"}


id: PBO:0042552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 15","termid":"PBO:0042552"}


id: GO:0004360
data:
  {"annotated_genes":["SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98892],"is_not":false,"summary":null,"term":"GO:0004360"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose 6-phosphate + L-glutamine = D-glucosamine 6-phosphate + L-glutamate.","definition_xrefs":["RHEA:13237","EC:2.6.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine aminotransferase activity","termid":"GO:0070548"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"glutamine-fructose-6-phosphate transaminase (isomerizing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:L-GLN-FRUCT-6-P-AMINOTRANS-RXN","Reactome:R-HSA-449715","KEGG_REACTION:R00768","Reactome:R-HSA-4085027"],"synonyms":[{"name":"D-fructose-6-phosphate amidotransferase activity","type":"related"},{"name":"GlcN6P synthase activity","type":"related"},{"name":"L-glutamine-D-fructose-6-phosphate amidotransferase activity","type":"related"},{"name":"L-glutamine:D-fructose-6-phosphate isomerase (deaminating)","type":"related"},{"name":"glucosamine 6-phosphate synthase activity","type":"related"},{"name":"glucosamine--fructose-6-phosphate aminotransferase (isomerizing) activity","type":"related"},{"name":"glucosamine-6-phosphate isomerase (glutamine-forming) activity","type":"exact"},{"name":"glucosamine-6-phosphate synthase activity","type":"related"},{"name":"glucosaminephosphate isomerase","type":"broad"},{"name":"hexosephosphate aminotransferase activity","type":"related"}],"termid":"GO:0004360","terms_by_termid":{"GO:0004360":null}}


id: PBO:0001114
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.36","termid":"PBO:0001114"}


id: GO:0019284
data:
  {"annotated_genes":["SJAG_03614","SJAG_02689","SJAG_01404"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88750,95116,103100],"is_not":false,"summary":null,"term":"GO:0019284"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine from S-adenosylmethionine.","definition_xrefs":["GOC:go_curators","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine salvage","termid":"GO:0071267"},{"relation_name":"part_of","term_name":"S-adenosylmethionine cycle","termid":"GO:0033353"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01404":null,"SJAG_02689":null,"SJAG_03614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-methionine salvage from S-adenosylmethionine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-methionine formation from S-adenosylmethionine","type":"exact"},{"name":"L-methionine synthesis from S-adenosylmethionine","type":"exact"}],"termid":"GO:0019284","terms_by_termid":{"GO:0019284":null}}


id: PBO:0048866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 11","termid":"PBO:0048866"}


id: PBO:0055674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIPC antisense RNA 1","termid":"PBO:0055674"}


id: PBO:0056750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL5 pseudogene 1","termid":"PBO:0056750"}


id: FYPO:0000464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of intracellular transport is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased intracellular transport","synonyms":[{"name":"decreased intracellular transport during mitotic cell cycle","type":"related"},{"name":"decreased intracellular transport during vegetative growth","type":"exact"},{"name":"intracellular transport: decreased","type":"related"},{"name":"reduced intracellular transport","type":"exact"}],"termid":"FYPO:0000464"}


id: SO:0000446
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intron located in the untranslated region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR_intron","synonyms":[{"name":"UTR intron","type":"exact"}],"termid":"SO:0000446"}


id: PR:O74821
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC337.10c gene.","definition_xrefs":["UniProtKB:O74821","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fe-S cluster assembly protein dre2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.10c","synonyms":[{"name":"Spom972h-SPBC337.10c","type":"exact"},{"name":"anamorsin homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74821"}


id: PBO:0056286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MANEA divergent transcript","termid":"PBO:0056286"}


id: PBO:0055150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2569","termid":"PBO:0055150"}


id: PBO:0044867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2B","termid":"PBO:0044867"}


id: GO:0098992
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense core vesicle (granule) that is part of a neuron. These vesicles typically contain neuropeptides. They can be found in all parts of neurons, including the soma, dendrites, axonal swellings (varicosities) and synaptic terminals.","definition_xrefs":["GOC:dos","Wikipedia:Neuropeptide&oldid=713905176","ISBN:978-0-07-181001-2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule","termid":"GO:0031045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"neuronal dense core vesicle","termid":"GO:0098992"}


id: GO:0030984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kininogen, a kinin precursor.","definition_xrefs":["GOC:mah","PMID:9520414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"kininogen binding","termid":"GO:0030984"}


id: PBO:0052853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-9","termid":"PBO:0052853"}


id: PBO:0071560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 26","termid":"PBO:0071560"}


id: GO:0015010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrahydrocorphins, tetrapyrroles that combine the structural elements of both porphyrins and corrins.","definition_xrefs":["Wikipedia:Morphine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel-tetrapyrrole coenzyme metabolic process","termid":"GO:0015011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"tetrahydrocorphin metabolic process","synonyms":[{"name":"tetrahydrocorphin metabolism","type":"exact"}],"termid":"GO:0015010"}


id: SO:1001193
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is alternately spliced, and encodes more than one polypeptide, that have overlapping peptide sequences, but use different start and stop codons.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encodes_overlapping_peptides","termid":"SO:1001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_overlapping_polypeptides_different_start_and_stop","synonyms":[{"name":"encodes overlapping polypeptides different start and stop","type":"exact"}],"termid":"SO:1001193"}


id: GO:0106220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrocyanin, an iminium betaine that is 5-methylphenazin-5-ium which is substituted at position 1 by an oxidanidyl group.","definition_xrefs":["PMID:28715477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyocyanine biosynthetic process","synonyms":[{"name":"pyocyanin biosynthetic process","type":"exact"}],"termid":"GO:0106220"}


id: PBO:0066915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 217","termid":"PBO:0066915"}


id: PBO:0086500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative plasma membrane sensor; involved in cell integrity signaling and stress response during glucose starvation and oxidative stress; has structural and functional similarity to Mid2p; MTL1 has a paralog, MID2, that arose from the whole genome duplication","termid":"PBO:0086500"}


id: PBO:0072969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1C member 1","termid":"PBO:0072969"}


id: GO:0047817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arginine + H2O = D-ornithine + urea.","definition_xrefs":["RHEA:12901","EC:3.5.3.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"D-arginase activity","secondary_identifiers":["KEGG_REACTION:R02458","MetaCyc:D-ARGINASE-RXN"],"synonyms":[{"name":"D-arginine amidinohydrolase activity","type":"related"}],"termid":"GO:0047817"}


id: GO:0008978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a Gly-Phe bond to release an N-terminal, basic peptide of 5-8 residues from type IV prepilin, and then N-methylates the new N-terminal amino group, the methyl donor being S-adenosyl-L-methionine.","definition_xrefs":["EC:3.4.23.43"],"gene_count":0,"genotype_count":0,"name":"obsolete prepilin peptidase activity (obsolete GO:0008978)","synonyms":[{"name":"prepilin peptidase activity","type":"exact"}],"termid":"GO:0008978"}


id: PBO:0046845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 7","termid":"PBO:0046845"}


id: PR:Q9HDW1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03262","PANTHER:PTHR12586:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP18G5.02","secondary_identifiers":["UniProtKB:Q9HDW1"],"synonyms":[{"name":"PGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PGS1","type":"exact"},{"name":"phosphatidylglycerophosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDW1"}


id: PBO:0030090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_dipeptide_nitrogen_source","termid":"PBO:0030090"}


id: PBO:0085922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0085922"}


id: GO:0106388
data:
  {"annotated_genes":["SJAG_03755"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88374],"is_not":false,"summary":null,"term":"GO:0106388"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N1-methylpseudouridine in 18S rRNA + S-adenosyl-L-methionine = H+ + N1-methyl-N3-[(3S)-3-amino-3-carboxypropyl]pseudouridine in 18S rRNA + S-methyl-5'-thioadenosine.","definition_xrefs":["PMID:27084949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a rRNA","termid":"GO:0140102"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03755":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"18S rRNA aminocarboxypropyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:63296"],"termid":"GO:0106388","terms_by_termid":{"GO:0106388":null}}


id: PR:O14121
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nde2 gene.","definition_xrefs":["UniProtKB:O14121","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.07","synonyms":[{"name":"Spom972h-nde2","type":"exact"}],"termid":"PR:O14121"}


id: GO:1905050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metallopeptidase activity.","definition_xrefs":["GOC:TermGenie","PMID:26473732","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of metallopeptidase activity","termid":"GO:1905048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metallopeptidase activity","synonyms":[{"name":"activation of metallopeptidase activity","type":"narrow"},{"name":"activation of metalloprotease activity","type":"narrow"},{"name":"activation of metalloproteinase activity","type":"narrow"},{"name":"positive regulation of metalloprotease activity","type":"narrow"},{"name":"positive regulation of metalloproteinase activity","type":"narrow"},{"name":"up regulation of metallopeptidase activity","type":"exact"},{"name":"up regulation of metalloprotease activity","type":"narrow"},{"name":"up regulation of metalloproteinase activity","type":"narrow"},{"name":"up-regulation of metallopeptidase activity","type":"exact"},{"name":"up-regulation of metalloprotease activity","type":"narrow"},{"name":"up-regulation of metalloproteinase activity","type":"narrow"},{"name":"upregulation of metallopeptidase activity","type":"exact"},{"name":"upregulation of metalloprotease activity","type":"narrow"},{"name":"upregulation of metalloproteinase activity","type":"narrow"}],"termid":"GO:1905050"}


id: PBO:0082180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGC family protein kinase; functional ortholog of mammalian S6 kinase; phosphorylated by Tor1p and required for TORC1-mediated regulation of ribosome biogenesis, translation initiation, and entry into G0 phase; involved in transactivation of osmostress-responsive genes; regulates G1 progression, cAPK activity and nitrogen activation of the FGM pathway; integrates nutrient signals and stress signals from sphingolipids to regulate lifespan","termid":"PBO:0082180"}


id: GO:0102122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A34 + S-adenosyl-L-methionine = gibberellin A34 methyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz","RHEA:36127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"gibberellin A34 carboxyl methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11384"],"termid":"GO:0102122"}


id: PBO:0038500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 9","termid":"PBO:0038500"}


id: FYPO:0006174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle elongation does not occur during anaphase B. Normally, the spindle elongates immediately following assembly during prophase, remains at a static length during metaphase and anaphase A, and elongates further during anaphase B.","definition_xrefs":["PomBase:mah","PMID:21920317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitotic spindle elongation","termid":"FYPO:0003829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0000631","FYPO:0000641","FYPO:0001985","FYPO:0000337","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitotic spindle elongation during anaphase B","synonyms":[{"name":"abolished mitotic spindle extension during anaphase B","type":"exact"},{"name":"abolished spindle elongation during anaphase B during mitotic cell cycle","type":"related"},{"name":"abolished spindle elongation during mitotic anaphase B","type":"exact"},{"name":"mitotic spindle elongation abolished during anaphase B","type":"exact"},{"name":"mitotic spindle elongation abolished during anaphase B during vegetative growth","type":"exact"}],"termid":"FYPO:0006174"}


id: PBO:0002456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Zip1","termid":"PBO:0002456"}


id: FYPO:0004768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-arginine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular arginine level","termid":"FYPO:0005263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased vacuolar arginine level","synonyms":[{"name":"increased level of arginine in vacuole","type":"exact"},{"name":"increased vacuolar L-arginine level","type":"exact"},{"name":"increased vacuolar arginine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar arginine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004768"}


id: GO:0036230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a granulocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["CL:0000094","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulocyte activation","termid":"GO:0036230"}


id: PR:Q9UT81
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NSFL1 cofactor p47 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.09","secondary_identifiers":["UniProtKB:Q9UT81"],"synonyms":[{"name":"Spom972h-NSFL1C","type":"exact"},{"name":"meiotically up-regulated gene 39 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT81"}


id: PBO:0068310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 13","termid":"PBO:0068310"}


id: PBO:0084819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0084819"}


id: GO:0097572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two nuclei found in Giardia species (trophozoite stage). It is located on the right side of the cell when viewed from the dorsal side.","definition_xrefs":["GOC:giardia","ISBN:0-444-81258-X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"right nucleus","termid":"GO:0097572"}


id: PBO:0061254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase interacting protein","termid":"PBO:0061254"}


id: PBO:0060251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL pseudogene 1","termid":"PBO:0060251"}


id: GO:0016126
data:
  {"annotated_genes":["SJAG_00580","SJAG_04810","SJAG_00370","SJAG_00717","SJAG_03018","SJAG_03509","SJAG_00413","SJAG_01307","SJAG_03598","SJAG_03750","SJAG_03531","SJAG_03249","SJAG_04217","SJAG_01474","SJAG_02855","SJAG_03715","SJAG_04865","SJAG_02982","SJAG_03235","SJAG_04499","SJAG_02044","SJAG_03929","SJAG_02719","SJAG_00235","SJAG_03352","SJAG_03024","SJAG_00453","SJAG_00624","SJAG_02104","SJAG_00770","SJAG_04018","SJAG_03349","SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107399,105338,87593,85782,106179,100369,114837,100553,103628,107904,100783,92699,90741,103809,94152,84831,94951,105577,88638,88691,84609,112640,95692,84863,111323,103942,110992,102614,90549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[89984],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[105947],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[105948],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[84698,84699,101922],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-2541"],"synonyms":[{"name":"sterol anabolism","type":"exact"},{"name":"sterol biosynthesis","type":"exact"},{"name":"sterol formation","type":"exact"},{"name":"sterol synthesis","type":"exact"}],"termid":"GO:0016126","terms_by_termid":{"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


