# terms

id: PBO:0086587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; epitope-tagged protein localizes to the cytoplasm; YHR033W has a paralog, PRO1, that arose from the whole genome duplication","termid":"PBO:0086587"}


id: PBO:0062923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P2Y receptor family member 10B, pseudogene","termid":"PBO:0062923"}


id: PBO:0056490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC associated zinc finger protein","termid":"PBO:0056490"}


id: PBO:0066927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 229","termid":"PBO:0066927"}


id: GO:0044735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant negative regulation in the activity of an acid-sensing ion channel (ASIC) in the bitten organism.","definition_xrefs":["GOC:fj","PMID:23034652","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of acid-sensing ion channel activity in another organism","termid":"GO:0044733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of acid-sensing ion channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of ASIC channel activity in other organism","type":"exact"},{"name":"envenomation resulting in negative regulation of acid-sensing ion channel activity in other organism","type":"exact"}],"termid":"GO:0044735"}


id: GO:0071211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directing proteins towards the vacuole using signals contained within the protein, occurring as part of autophagy, the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to vacuole","termid":"GO:0006623"},{"relation_name":"part_of","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0044248","GO:0006914","GO:0006605"],"is_obsolete":false,"name":"protein targeting to vacuole involved in autophagy","synonyms":[{"name":"protein targeting to autophagosome","type":"related"}],"termid":"GO:0071211"}


id: GO:0047069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydroxykynurenate + O2 = 5-(3-carboxylato-3-oxoprop-1-en-1-yl)-4,6-dihydroxypyridine-2-carboxylate + H+.","definition_xrefs":["EC:1.13.11.10","RHEA:23400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"7,8-dihydroxykynurenate 8,8a-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03253","MetaCyc:1.13.11.10-RXN"],"synonyms":[{"name":"7,8-dihydroxykynurenate 8,8alpha-dioxygenase activity","type":"related"},{"name":"7,8-dihydroxykynurenate oxygenase activity","type":"related"},{"name":"7,8-dihydroxykynurenate:oxygen 8,8a-oxidoreductase (decyclizing)","type":"related"},{"name":"7,8-dihydroxykynurenate:oxygen 8,8alpha-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047069"}


id: PBO:0034501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV_during_late_mitotic_G2_phase","termid":"PBO:0034501"}


id: GO:0030255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins are transferred into the extracellular milieu or directly into host cells, via the type IV protein secretion system.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"secretion by the type IV secretion system","termid":"GO:0044097"},{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"protein secretion by the type IV secretion system","synonyms":[{"name":"protein secretion by the T4SS","type":"exact"},{"name":"protein secretion by the type IV protein secretion system","type":"exact"},{"name":"type IV protein secretion system","type":"narrow"}],"termid":"GO:0030255"}


id: PBO:0087865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of the basic leucine zipper (bZIP) family; required for transcription of genes involved in resistance to arsenic compounds; directly binds trivalent arsenic (As(III)) as does K. lactis ortholog, KIYAP8","termid":"PBO:0087865"}


id: GO:0020025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Singlet microtubule that lie underneath the inner membrane pellicle complex and emanate from the basal ring of the conoid.","definition_xrefs":["GOC:mb","PMID:24800253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"subpellicular microtubule","termid":"GO:0020025"}


id: GO:0102967
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6E)-8-hydroxygeraniol + NADP = (6E)-8-hydroxygeranial + NADPH + H+.","definition_xrefs":["RHEA:32607","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"10-hydroxygeraniol oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-9367"],"termid":"GO:0102967"}


id: FYPO:0005008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) does not occur.","definition_xrefs":["PMID:22976295","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation at RxxS site during vegetative growth (obsolete FYPO:0005008)","synonyms":[{"name":"abolished protein serine phosphorylation at Arg-X-X-Ser site during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at PAS site during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during mitotic cell cycle","type":"related"},{"name":"abolished protein serine phosphorylation at arginine-X-X-serine site during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at phospho-Akt site during vegetative growth","type":"exact"},{"name":"protein serine phosphorylation abolished at RxxS site during vegetative growth","type":"exact"}],"termid":"FYPO:0005008"}


id: MOD:00618
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:299#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan carboxylation","synonyms":[{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"}],"termid":"MOD:00618"}


id: GO:0003878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + ADP + H+ + oxaloacetate + phosphate = ATP + citrate + CoA.","definition_xrefs":["RHEA:21160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ATP citrate synthase activity","secondary_identifiers":["KEGG_REACTION:R00352","Reactome:R-HSA-75848","MetaCyc:ATP-CITRATE-PRO-S--LYASE-RXN","EC:2.3.3.8","MetaCyc:PWY-5172","GO:0046913"],"synonyms":[{"name":"ATP citrate (pro-S)-lyase activity","type":"related"},{"name":"ATP-citrate (pro-S)-lyase activity","type":"exact"},{"name":"ATP-citrate (pro-S-)-lyase activity","type":"related"},{"name":"ATP-citric lyase activity","type":"related"},{"name":"ATP:citrate oxaloacetate-lyase ((pro-S)-CH(2)COO(-)->acetyl-CoA) (ATP- dephosphorylating) activity","type":"related"},{"name":"ATP:citrate oxaloacetate-lyase [(pro-S)-CH2COO-rightacetyl-CoA] (ATP-dephosphorylating)","type":"related"},{"name":"acetyl-CoA:oxaloacetate C-acetyltransferase [(pro-S)-carboxymethyl-forming, ADP-phosphorylating]","type":"related"},{"name":"acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP- phosphorylating) activity","type":"related"},{"name":"acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP-phosphorylating)","type":"related"},{"name":"adenosine triphosphate citrate lyase activity","type":"related"},{"name":"citrate cleavage enzyme activity","type":"related"},{"name":"citrate-ATP lyase activity","type":"related"},{"name":"citric cleavage enzyme activity","type":"related"}],"termid":"GO:0003878"}


id: SO:0000958
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded, circular DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"circular","termid":"SO:0000988"},{"relation_name":"is_a","term_name":"double_stranded_DNA_chromosome","termid":"SO:0000955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_double_stranded_DNA_chromosome","synonyms":[{"name":"circular double stranded DNA chromosome","type":"exact"}],"termid":"SO:0000958"}


id: GO:0005085
data:
  {"annotated_genes":["SJAG_02819","SJAG_01699","SJAG_02471","SJAG_02529","SJAG_05023","SJAG_04653","SJAG_01576","SJAG_00064","SJAG_02493","SJAG_03704","SJAG_03705","SJAG_03581","SJAG_01415","SJAG_02027","SJAG_02645","SJAG_03002","SJAG_01659","SJAG_05210","SJAG_02160","SJAG_04982","SJAG_04491","SJAG_04615","SJAG_01030","SJAG_02004","SJAG_05184","SJAG_00807","SJAG_04837","SJAG_01309","SJAG_02368","SJAG_02248","SJAG_03246","SJAG_04010","SJAG_03600","SJAG_00858","SJAG_03142","SJAG_04771","SJAG_02833","SJAG_02307","SJAG_03089","SJAG_02486","SJAG_03488","SJAG_01025","SJAG_00216","SJAG_00514","SJAG_00143","SJAG_06588","SJAG_04464","SJAG_03678"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73727,74822,83652,84195,85998,87299,87581,88219,88867,89968,90152,90428,90690,91101,92163,92430,92777,93428,93837,93875,93924,94082,94558,95213,95935,95936,96603,96604,101215,102496,103089,104054,104409,105200,106110,106215,106774,106886,107111,110038,110082,110083,110716,110817,110895,111618,111893,112599,113965,113979],"is_not":false,"summary":null,"term":"GO:0005085"}]},"cv_name":"molecular_function","definition":"Stimulates the exchange of GDP to GTP on a signaling GTPase, changing its conformation to its active form. Guanine nucleotide exchange factors (GEFs) act by stimulating the release of guanosine diphosphate (GDP) to allow binding of guanosine triphosphate (GTP), which is more abundant in the cell under normal cellular physiological conditions.","definition_xrefs":["GOC:kd","GOC:mah","PMID:27218782","PMID:23303910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase regulator activity","termid":"GO:0030695"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00143":null,"SJAG_00216":null,"SJAG_00514":null,"SJAG_00807":null,"SJAG_00858":null,"SJAG_01025":null,"SJAG_01030":null,"SJAG_01309":null,"SJAG_01415":null,"SJAG_01576":null,"SJAG_01659":null,"SJAG_01699":null,"SJAG_02004":null,"SJAG_02027":null,"SJAG_02160":null,"SJAG_02248":null,"SJAG_02307":null,"SJAG_02368":null,"SJAG_02471":null,"SJAG_02486":null,"SJAG_02493":null,"SJAG_02529":null,"SJAG_02645":null,"SJAG_02819":null,"SJAG_02833":null,"SJAG_03002":null,"SJAG_03089":null,"SJAG_03142":null,"SJAG_03246":null,"SJAG_03488":null,"SJAG_03581":null,"SJAG_03600":null,"SJAG_03678":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_04010":null,"SJAG_04464":null,"SJAG_04491":null,"SJAG_04615":null,"SJAG_04653":null,"SJAG_04771":null,"SJAG_04837":null,"SJAG_04982":null,"SJAG_05023":null,"SJAG_05184":null,"SJAG_05210":null,"SJAG_06588":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"guanyl-nucleotide exchange factor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-194518","Reactome:R-HSA-2029445","GO:0005090","Reactome:R-HSA-418850","Reactome:R-HSA-1225951","Reactome:R-HSA-5623521","Reactome:R-HSA-8876616","Reactome:R-HSA-1433415","Reactome:R-HSA-9013143","Reactome:R-HSA-9660824","Reactome:R-HSA-8877998","Reactome:R-HSA-8980691","Reactome:R-HSA-177945","Reactome:R-HSA-9017491","Reactome:R-HSA-9665408","Reactome:R-HSA-8875320","Reactome:R-HSA-8982637","Reactome:R-HSA-1250498","Reactome:R-HSA-9013109","Reactome:R-HSA-380073","Reactome:R-HSA-379048","Reactome:R-HSA-428750","Reactome:R-HSA-2424477","Reactome:R-HSA-8851827","Reactome:R-HSA-180687","Reactome:R-HSA-9029158","Reactome:R-HSA-2424476","Reactome:R-HSA-399995","Reactome:R-HSA-389350","Reactome:R-HSA-5686318","Reactome:R-HSA-171026","Reactome:R-HSA-9013435","Reactome:R-HSA-419166","Reactome:R-HSA-187746","Reactome:R-HSA-5617816","Reactome:R-HSA-5637808","Reactome:R-HSA-420883","Reactome:R-HSA-399938","Reactome:R-HSA-5655347","Reactome:R-HSA-939265","Reactome:R-HSA-9018825","Reactome:R-HSA-9013159","Reactome:R-HSA-5686071","Reactome:R-HSA-6811418","Reactome:R-HSA-392195","Reactome:R-HSA-3928628","Reactome:R-HSA-109817","Reactome:R-HSA-8848618","Reactome:R-HSA-416530","Reactome:R-HSA-9018804","GO:0017112","Reactome:R-HSA-8851877","Reactome:R-HSA-8875591","Reactome:R-HSA-9664991","Reactome:R-HSA-9665009","Reactome:R-HSA-442291","Reactome:R-HSA-9672170","Reactome:R-HSA-8877451","Reactome:R-HSA-9026891","GO:0005086","Reactome:R-HSA-2029451","Reactome:R-HSA-354173","Reactome:R-HSA-5218850","Reactome:R-HSA-825631","Reactome:R-HSA-9703441","Reactome:R-HSA-8850041","Reactome:R-HSA-5218829","GO:0017132","Reactome:R-HSA-3928633","Reactome:R-HSA-5654413","Reactome:R-HSA-392054","Reactome:R-HSA-5654402","Reactome:R-HSA-9639286","Reactome:R-HSA-9672163","Reactome:R-HSA-9751201","Reactome:R-HSA-2179407","Reactome:R-HSA-8876190","Reactome:R-HSA-4093336","Reactome:R-HSA-9619803","Reactome:R-HSA-350769","Reactome:R-HSA-442314","Reactome:R-HSA-5637806","GO:0008433","GO:0005087","Reactome:R-HSA-3928612","Reactome:R-HSA-8876191","Reactome:R-HSA-8876193","Reactome:R-HSA-8876454","Reactome:R-HSA-9680385","Reactome:R-HSA-9014433","Reactome:R-HSA-1225957","Reactome:R-HSA-5655241","Reactome:R-HSA-9032067","Reactome:R-HSA-9634418","Reactome:R-HSA-8875568","Reactome:R-HSA-9666430","Reactome:R-HSA-442732","Reactome:R-HSA-442273","Reactome:R-HSA-6811414","Reactome:R-HSA-186834","GO:0030676","Reactome:R-HSA-9640167","Reactome:R-HSA-389348","Reactome:R-HSA-2485180","Reactome:R-HSA-392870","Reactome:R-HSA-9607304","Reactome:R-HSA-379044","Reactome:R-HSA-5218839","Reactome:R-HSA-9624845","Reactome:R-HSA-3928642","Reactome:R-HSA-9695853","GO:0005088","Reactome:R-HSA-1168636","GO:0019839","Reactome:R-HSA-210977","Reactome:R-HSA-9665700","Reactome:R-HSA-9670436","Reactome:R-HSA-177938","Reactome:R-HSA-5654618","Reactome:R-HSA-428535","Reactome:R-HSA-9666428","Reactome:R-HSA-1433471","GO:0005089","GO:0017034","Reactome:R-HSA-3928632","Reactome:R-HSA-3928651","Reactome:R-HSA-5654426","Reactome:R-HSA-5654600","Reactome:R-HSA-749453","Reactome:R-HSA-8982640","Reactome:R-HSA-9018747","Reactome:R-HSA-6807868","Reactome:R-HSA-170979","Reactome:R-HSA-5655326","Reactome:R-HSA-156913","Reactome:R-HSA-8877475","Reactome:R-HSA-9693111","GO:0008321","Reactome:R-HSA-114544","Reactome:R-HSA-8875318","Reactome:R-HSA-5623508","Reactome:R-HSA-9018817","Reactome:R-HSA-9665404","Reactome:R-HSA-1250463","GO:0016219","Reactome:R-HSA-205039","Reactome:R-HSA-109807","Reactome:R-HSA-5672965","Reactome:R-HSA-5694409","Reactome:R-HSA-8851899","Reactome:R-HSA-8877308","Reactome:R-HSA-5654663","Reactome:R-HSA-8964604","Reactome:R-HSA-1306972","Reactome:R-HSA-9032798","Reactome:R-HSA-9014296","Reactome:R-HSA-9036301","Reactome:R-HSA-9013023","Reactome:R-HSA-428917","Reactome:R-HSA-9033292","Reactome:R-HSA-8876188","Reactome:R-HSA-203977","Reactome:R-HSA-3928592","Reactome:R-HSA-8877311","Reactome:R-HSA-3965444","Reactome:R-HSA-418579","GO:0016220","Reactome:R-HSA-751029","Reactome:R-HSA-8877813","Reactome:R-HSA-8877612","Reactome:R-HSA-418856","Reactome:R-HSA-2730840","Reactome:R-HSA-5655277","Reactome:R-HSA-1250383","Reactome:R-HSA-2029467","Reactome:R-HSA-445064","Reactome:R-HSA-5654647","Reactome:R-HSA-6811429","Reactome:R-HSA-5654392","Reactome:R-HSA-169904","Reactome:R-HSA-8876837","Reactome:R-HSA-8877760","Reactome:R-HSA-8876615","Reactome:R-HSA-9018768","Reactome:R-HSA-9665707","Reactome:R-HSA-416588"],"synonyms":[{"name":"ARF guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"GDP-dissociation stimulator activity","type":"exact"},{"name":"GDS","type":"exact"},{"name":"GEF","type":"exact"},{"name":"GNRP","type":"narrow"},{"name":"Rab guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rac guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ral guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ran guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rap guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ras guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rho guanine nucleotide exchange factor","type":"exact"},{"name":"Rho guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"RhoGEF","type":"exact"},{"name":"Sar guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"cAMP-dependent guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"guanyl-nucleotide release factor activity","type":"exact"},{"name":"guanyl-nucleotide releasing factor","type":"exact"}],"termid":"GO:0005085","terms_by_termid":{"GO:0005085":null}}


id: PBO:0083720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-resident protein involved in peroxisomal biogenesis; ER-localized protein that associates with peroxisomes; interacts with Pex29p and reticulons Rtn1p and Yop1p to regulate peroxisome biogenesis from the ER; role in peroxisomal-destined vesicular flow from the ER; partially redundant with Pex31p; may function at a step downstream of steps mediated by Pex28p and Pex29p; PEX30 has a paralog, PEX31, that arose from the whole genome duplication","termid":"PBO:0083720"}


id: PBO:0080818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray radiation resistance associated 1","termid":"PBO:0080818"}


id: PBO:0046319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENO1 antisense RNA 1","termid":"PBO:0046319"}


id: PBO:0060989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-homologous end joining factor 1","termid":"PBO:0060989"}


id: PBO:0067448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 570, pseudogene","termid":"PBO:0067448"}


id: FYPO:0001845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which kinetochore organization is normal (i.e. indistinguishable from wild type). Kinetochore organization is the assembly, arrangement of constituent parts, or disassembly of kinetochores and their associated proteins.","definition_xrefs":["GO:0051383","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal kinetochore organization","synonyms":[{"name":"normal kinetochore organisation","type":"exact"},{"name":"normal kinetochore organization during mitotic cell cycle","type":"related"},{"name":"normal kinetochore organization during vegetative growth","type":"exact"}],"termid":"FYPO:0001845"}


id: PBO:0071352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 11","termid":"PBO:0071352"}


id: GO:0035543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of assembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of SNARE complex assembly","termid":"GO:0035542"},{"relation_name":"positively_regulates","term_name":"SNARE complex assembly","termid":"GO:0035493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085","GO:0006810","GO:0016192","GO:0061024"],"is_obsolete":false,"name":"positive regulation of SNARE complex assembly","termid":"GO:0035543"}


id: PBO:0073651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIL1 nucleotide exchange factor","termid":"PBO:0073651"}


id: GO:0010986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of lipoprotein particle clearance. Lipoprotein particle clearance is the process in which a lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"}


id: GO:1900931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-tyrosine import into the cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-tyrosine import across plasma membrane","termid":"GO:1900929"},{"relation_name":"positively_regulates","term_name":"L-tyrosine import across plasma membrane","termid":"GO:1903808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of L-tyrosine import across plasma membrane","synonyms":[{"name":"activation of L-tyrosine import","type":"narrow"},{"name":"activation of L-tyrosine uptake","type":"narrow"},{"name":"positive regulation of L-tyrosine import","type":"broad"},{"name":"positive regulation of L-tyrosine uptake","type":"related"},{"name":"up regulation of L-tyrosine import","type":"exact"},{"name":"up regulation of L-tyrosine uptake","type":"related"},{"name":"up-regulation of L-tyrosine import","type":"exact"},{"name":"up-regulation of L-tyrosine uptake","type":"related"},{"name":"upregulation of L-tyrosine import","type":"exact"},{"name":"upregulation of L-tyrosine uptake","type":"related"}],"termid":"GO:1900931"}


id: PBO:0073284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 5","termid":"PBO:0073284"}


id: GO:0003701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to initiate or regulate RNA polymerase I transcription.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase I transcription factor activity (obsolete GO:0003701)","synonyms":[{"name":"RNA polymerase I transcription factor activity","type":"exact"}],"termid":"GO:0003701"}


id: GO:0140627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide covalently tagged with ubiquitin, via the DesCEND (destruction via C-end degron) pathway. In the DesCEND pathway, C-terminal residues (C-end degrons) in substrates are recognized by Cul2-RING and Cul4-RING E3 ligases, whereupon the substrates are linked to ubiquitin and then delivered to the proteasome for degradation. C-end degrons can be present in full-length proteins, truncated proteins or proteolytically cleaved forms.","definition_xrefs":["PMID:29779948","PMID:29775578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"ubiquitin-dependent protein catabolic process via the C-end degron rule pathway","synonyms":[{"name":"DesCEND","type":"exact"}],"termid":"GO:0140627"}


id: PR:Q10061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsh1 gene.","definition_xrefs":["UniProtKB:Q10061","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 70 homolog lhs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.06","synonyms":[{"name":"Spom972h-lsh1","type":"exact"}],"termid":"PR:Q10061"}


id: GO:0006721
data:
  {"annotated_genes":["SJAG_01474","SJAG_04865","SJAG_04499","SJAG_04568","SJAG_03715","SJAG_04307","SJAG_03349","SJAG_00580","SJAG_03360","SJAG_00624","SJAG_03352","SJAG_00413","SJAG_02719"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97979,95693,110993,107400,109846,102615,90550,105578,92700,84832,94153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"},{"annotations":[95694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033384"},{"annotations":[105579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033386"},{"annotations":[65739,84864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure and including derivatives with various functional groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_01474":null,"SJAG_02719":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03360":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04499":null,"SJAG_04568":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"terpenoid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"terpenoid metabolism","type":"exact"}],"termid":"GO:0006721","terms_by_termid":{"GO:0010142":null,"GO:0016104":null,"GO:0033384":null,"GO:0033386":null}}


id: PBO:0028648
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiosis_I","termid":"PBO:0028648"}


id: PBO:0069910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1201, pseudogene","termid":"PBO:0069910"}


id: PBO:0086448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mannosyltransferase involved in protein glycosylation; member of the KRE2/MNT1 mannosyltransferase family; KTR5 has a paralog, KTR7, that arose from the whole genome duplication","termid":"PBO:0086448"}


id: PBO:0074088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC26A4 antisense RNA 1","termid":"PBO:0074088"}


id: PBO:0046445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythropoietin","termid":"PBO:0046445"}


id: PBO:0087830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thermolabile killer toxin encoded on the right arm of Chromosome V","termid":"PBO:0087830"}


id: PBO:0069115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 364, pseudogene","termid":"PBO:0069115"}


id: PBO:0043819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine family member 9","termid":"PBO:0043819"}


id: GO:0102988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z,12Z)-hexadecadienoyl-CoA + O2 + a reduced electron acceptor = 9,12,15-cis-hexadecatrienoyl-CoA + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["EC:1.14.19.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"9,12-cis-hexadecadienoic acid delta 15 desaturase activity","secondary_identifiers":["RHEA:46232","MetaCyc:RXN-9617"],"termid":"GO:0102988"}


id: PBO:0064430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 7","termid":"PBO:0064430"}


id: GO:1903775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA double-strand break processing.","definition_xrefs":["PMID:25203555","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA double-strand break processing","termid":"GO:0000729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA double-strand break processing","termid":"GO:1903775"}


id: PATO:0000474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000474 shattering value (obsolete PATO:0000474)","termid":"PATO:0000474"}


id: PBO:0077003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 5","termid":"PBO:0077003"}


id: GO:0036468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopa + H+ = CO2 + dopamine.","definition_xrefs":["RHEA:12272","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-L-amino-acid decarboxylase activity","termid":"GO:0004058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-dopa decarboxylase activity","synonyms":[{"name":"4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"DDC activity","type":"exact"},{"name":"DOPA decarboxylase activity","type":"related"}],"termid":"GO:0036468"}


id: GO:0046961
data:
  {"annotated_genes":["SJAG_01913","SJAG_02782","SJAG_02023","SJAG_03406","SJAG_00516","SJAG_01447","SJAG_00212","SJAG_04015","SJAG_01817","SJAG_04955","SJAG_01397","SJAG_05294","SJAG_00136","SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84174,85972,86282,88154,91767,92729,95020,96039,96116,97740,98772,100017,105970,114792],"is_not":false,"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out), by a rotational mechanism.","definition_xrefs":["RHEA:57721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"proton-transporting ATPase activity, rotational mechanism","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ATPSYN-RXN"],"synonyms":[{"name":"ATP phosphohydrolase (H+-transporting) activity","type":"narrow"},{"name":"ATP synthase activity","type":"narrow"},{"name":"F(0)F(1)-ATPase activity","type":"narrow"},{"name":"F(1)-ATPase activity","type":"narrow"},{"name":"F(o)F(1)-ATPase activity","type":"narrow"},{"name":"F0F1-ATPase","type":"narrow"},{"name":"F1-ATPase","type":"narrow"},{"name":"FoF1-ATPase","type":"narrow"},{"name":"H+-transporting ATP synthase activity","type":"narrow"},{"name":"H+-transporting ATPase activity","type":"narrow"},{"name":"chloroplast ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating A-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating F-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating V-type ATPase activity","type":"narrow"},{"name":"hydrogen ion transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"hydrogen ion transporting two-sector ATPase activity","type":"narrow"},{"name":"mitochondrial ATPase activity","type":"narrow"}],"termid":"GO:0046961","terms_by_termid":{"GO:0046961":null}}


id: PBO:0069479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 746, pseudogene","termid":"PBO:0069479"}


id: PBO:0082999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic serine hydroxymethyltransferase; converts serine to glycine plus 5,10 methylenetetrahydrofolate; major isoform involved in generating precursors for purine, pyrimidine, amino acid, and lipid biosynthesis","termid":"PBO:0082999"}


id: GO:0090497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a mesenchymal cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameboidal-type cell migration","termid":"GO:0001667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell migration","termid":"GO:0090497"}


id: PBO:0081467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF337 antisense RNA 1","termid":"PBO:0081467"}


id: PBO:0063945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53-induced noncoding RNA","termid":"PBO:0063945"}


id: PBO:0052271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4E","termid":"PBO:0052271"}


id: GO:0019141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantolactone + NADP+ = 2-dehydropantolactone + NADPH + H+. The reaction is B-specific (i.e. the pro-S hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NADP+.","definition_xrefs":["EC:1.1.1.214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-dehydropantolactone reductase activity","termid":"GO:0036441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-dehydropantolactone reductase (B-specific) activity","secondary_identifiers":["MetaCyc:1.1.1.168-RXN"],"synonyms":[{"name":"(R)-pantolactone:NADP+ oxidoreductase (B-specific)","type":"related"},{"name":"2-dehydropantoyl-lactone reductase (B-specific) activity","type":"exact"},{"name":"2-ketopantoyl lactone reductase activity","type":"broad"},{"name":"2-oxopantoyl lactone reductase","type":"broad"},{"name":"ketopantoyl lactone reductase activity","type":"broad"}],"termid":"GO:0019141"}


id: PBO:0029435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_abnormal_germ_tube_morphology","termid":"PBO:0029435"}


id: PBO:0082324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; bound by ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly to the nucleus throughout the cell cycle; protein abundance increases in response to DNA replication stress","termid":"PBO:0082324"}


id: GO:0070781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotin stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to biotin","synonyms":[{"name":"response to Bios IIB","type":"exact"},{"name":"response to coenzyme R","type":"exact"},{"name":"response to vitamin B7","type":"exact"},{"name":"response to vitamin H","type":"exact"}],"termid":"GO:0070781"}


id: GO:1900078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"},{"relation_name":"positively_regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to insulin stimulus","synonyms":[{"name":"activation of cellular response to insulin stimulus","type":"narrow"},{"name":"up regulation of cellular response to insulin stimulus","type":"exact"},{"name":"up-regulation of cellular response to insulin stimulus","type":"exact"},{"name":"upregulation of cellular response to insulin stimulus","type":"exact"}],"termid":"GO:1900078"}


id: GO:0043041
data:
  {"annotated_genes":["SJAG_04031"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90207],"is_not":false,"summary":null,"term":"GO:0043041"}]},"cv_name":"biological_process","definition":"Activation of an amino acid for incorporation into a peptide by a nonribosomal process.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid activation","termid":"GO:0043038"},{"relation_name":"part_of","term_name":"nonribosomal peptide biosynthetic process","termid":"GO:0019184"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"amino acid activation for nonribosomal peptide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nonribosomal amino acid activation","type":"related"}],"termid":"GO:0043041","terms_by_termid":{"GO:0043041":null}}


id: GO:1900549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N',N'',N'''-triacetylfusarinine C.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"N',N'',N'''-triacetylfusarinine C metabolic process","synonyms":[{"name":"N',N'',N'''-triacetylfusarinine C metabolism","type":"exact"}],"termid":"GO:1900549"}


id: PBO:0041077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of ribosomes BRX1","termid":"PBO:0041077"}


id: PATO:0001424
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with very low wavelength of that portion of the visible spectrum lying between reddish blue or bluish purple, evoked in the human observer by radiant energy with wavelengths of approximately 420 to 380 nanometers.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Violet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"violet","termid":"PATO:0001424"}


id: GO:0003905
data:
  {"annotated_genes":["SJAG_01971","SJAG_05257"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97677],"is_not":false,"summary":null,"term":"GO:0003905"},{"annotations":[97679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052820"},{"annotations":[73579,97680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008725"},{"annotations":[73585,97681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043916"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA with alkylated base + H2O = DNA with abasic site + alkylated base. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar to remove an alkylated base, leaving an apyrimidinic or apurinic site.","definition_xrefs":["GOC:elh","PMID:10872450","EC:3.2.2.21","PMID:9224623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01971":null,"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"alkylbase DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0004036","MetaCyc:3.2.2.21-RXN"],"synonyms":[{"name":"3-methyladenine DNA glycosylase II","type":"related"},{"name":"AlkA","type":"related"},{"name":"DNA glycosidase II activity","type":"related"},{"name":"DNA-3-methyladenine glycosidase II activity","type":"exact"},{"name":"DNA-3-methyladenine glycosylase II","type":"related"},{"name":"alkylated-DNA glycohydrolase (releasing methyladenine and methylguanine)","type":"broad"},{"name":"alkylbase DNA glycosidase activity","type":"exact"},{"name":"deoxyribonucleate 3-methyladenine glycosidase II","type":"related"}],"termid":"GO:0003905","terms_by_termid":{"GO:0003905":null,"GO:0008725":null,"GO:0043916":null,"GO:0052820":null}}


id: PBO:0073493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase 2","termid":"PBO:0073493"}


id: PR:000050536
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf3 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been dimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00084.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:22150589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf3 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050528"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf3/Me2(K20)","pombase_gene_id":"SPBC1105.12","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00084","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf3 gene translation product, initiator methionine removed dimethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf3/InitMet-/Me2:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00084","type":"broad"},{"name":"hhf3/Me2(K20)","type":"exact"},{"name":"histone H4 K20me2 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf3 K20me2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050536"}


id: GO:1902100
data:
  {"annotated_genes":["SJAG_03681","SJAG_01515","SJAG_04999","SJAG_03353","SJAG_02451","SJAG_00883","SJAG_04884","SJAG_01679","SJAG_02336","SJAG_01330","SJAG_04126","SJAG_04699","SJAG_03327","SJAG_04259","SJAG_01297","SJAG_01082","SJAG_03126","SJAG_02169","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104350,111991,110363,86835,103326,109883,99998,95686,108056],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[102399,110589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[97897,112766,102400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[102401,112769,109887,97898,110592,86837,106005,111640,95534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[94798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[102402,111641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[90305],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[109888],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[112773],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[97435],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[90306],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metaphase/anaphase transition of cell cycle.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle phase transition","termid":"GO:1901988"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902099"},{"relation_name":"negatively_regulates","term_name":"metaphase/anaphase transition of cell cycle","termid":"GO:0044784"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of metaphase/anaphase transition of cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of metaphase/anaphase transition of cell cycle","type":"exact"},{"name":"down-regulation of metaphase/anaphase transition of cell cycle","type":"exact"},{"name":"downregulation of metaphase/anaphase transition of cell cycle","type":"exact"},{"name":"inhibition of metaphase/anaphase transition of cell cycle","type":"narrow"}],"termid":"GO:1902100","terms_by_termid":{"GO:0007094":null,"GO:0033316":null,"GO:0045841":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902103":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0031625
data:
  {"annotated_genes":["SJAG_02591","SJAG_04573","SJAG_03643","SJAG_04335","SJAG_03575","SJAG_01540","SJAG_00452","SJAG_01134","SJAG_01365","SJAG_00803","SJAG_02253","SJAG_01226","SJAG_00615","SJAG_01686"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66256,69371,70830,71652,72314,73850,74631,75880,77334,77887,78016,78265,78549,79236],"is_not":false,"summary":null,"term":"GO:0031625"}]},"cv_name":"molecular_function","definition":"Binding to a ubiquitin protein ligase enzyme, any of the E3 proteins.","definition_xrefs":["GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase binding","termid":"GO:0044389"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00615":null,"SJAG_00803":null,"SJAG_01134":null,"SJAG_01226":null,"SJAG_01365":null,"SJAG_01540":null,"SJAG_01686":null,"SJAG_02253":null,"SJAG_02591":null,"SJAG_03575":null,"SJAG_03643":null,"SJAG_04335":null,"SJAG_04573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"ubiquitin protein ligase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"ubiquitin ligase binding","type":"exact"}],"termid":"GO:0031625","terms_by_termid":{"GO:0031625":null}}


id: FYPO:0007892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone exchange at subtelomeric heterochromatin is increased. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PMID:34731638","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone turnover","termid":"FYPO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone turnover at subtelomeric heterochromatin","termid":"FYPO:0007892"}


id: PBO:0086078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with similarity to globins; has a functional heme-binding domain; mutant has aneuploidy tolerance; transcription induced by stress conditions; may be involved in glucose signaling or metabolism; regulated by Rgt1","termid":"PBO:0086078"}


id: GO:0097201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["PMID:18627600","PMID:15575969","PMID:18086556","GOC:rn","PMID:11027285","PMID:16556235"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to stress (obsolete GO:0097201)","termid":"GO:0097201"}


id: PBO:0011961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unknown","termid":"PBO:0011961"}


id: GO:1901708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-3'-hydroxylarreatricin.","definition_xrefs":["PMID:12960376","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan biosynthetic process","termid":"GO:0009807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(+)-3'-hydroxylarreatricin biosynthetic process","synonyms":[{"name":"(+)-3'-hydroxylarreatricin anabolism","type":"exact"},{"name":"(+)-3'-hydroxylarreatricin biosynthesis","type":"exact"},{"name":"(+)-3'-hydroxylarreatricin formation","type":"exact"},{"name":"(+)-3'-hydroxylarreatricin synthesis","type":"exact"}],"termid":"GO:1901708"}


id: GO:0004161
data:
  {"annotated_genes":["SJAG_03352","SJAG_00580"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95695,95696,105580],"is_not":false,"summary":null,"term":"GO:0004161"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylallyl diphosphate + isopentenyl diphosphate = diphosphate + geranyl diphosphate.","definition_xrefs":["EC:2.5.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dimethylallyltranstransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:22408","MetaCyc:GPPSYN-RXN","Reactome:R-HSA-191322","Reactome:R-HSA-9717834"],"synonyms":[{"name":"(2E,6E)-farnesyl diphosphate synthetase activity","type":"related"},{"name":"DMAPP:IPP-dimethylallyltransferase activity","type":"related"},{"name":"dimethylallyl-diphosphate:isopentenyl-diphosphate dimethylallyltranstransferase activity","type":"related"},{"name":"dimethylallyltransferase activity","type":"exact"},{"name":"diprenyltransferase activity","type":"related"},{"name":"geranyl diphosphate synthase","type":"exact"},{"name":"geranyl pyrophosphate synthase activity","type":"related"},{"name":"geranyl pyrophosphate synthetase activity","type":"related"},{"name":"geranyl-diphosphate synthase activity","type":"related"},{"name":"trans-farnesyl pyrophosphate synthetase activity","type":"related"}],"termid":"GO:0004161","terms_by_termid":{"GO:0004161":null}}


id: GO:0060140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation in a cell that has been targeted by a virus of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060142"},{"relation_name":"part_of","term_name":"induction by virus of host cell-cell fusion","termid":"GO:0006948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by virus of syncytium formation via plasma membrane fusion","termid":"GO:0060140"}


id: FYPO:0002766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of clotrimazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to clotrimazole","synonyms":[{"name":"resistance to clotrimazole during mitotic cell cycle","type":"related"},{"name":"resistance to clotrimazole during vegetative growth","type":"exact"},{"name":"resistant to clotrimazole","type":"exact"}],"termid":"FYPO:0002766"}


id: GO:2000457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 17 cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000451"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 cell extravasation","termid":"GO:2000455"},{"relation_name":"positively_regulates","term_name":"T-helper 17 cell extravasation","termid":"GO:0035699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper 17 cell extravasation","termid":"GO:2000457"}


id: PATO:0001488
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a cell by virtue of whether the bearer exhibits the ability to move spontaneously.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular motility","termid":"PATO:0001488"}


id: PBO:0001459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc2","termid":"PBO:0001459"}


id: SO:1000081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation that alters the rate a which transcription of the sequence occurs.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000081 sequence_variant_affecting_rate_of_transcription (obsolete SO:1000081)","synonyms":[{"name":"mutation affecting rate of transcription","type":"related"},{"name":"sequence variant affecting rate of transcription","type":"exact"}],"termid":"SO:1000081"}


id: FYPO:0004495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, has more than one septum, and has a larger volume and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable branched, elongated, multiseptate vegetative cell","termid":"FYPO:0003413"},{"relation_name":"is_a","term_name":"inviable branched, swollen, elongated vegetative cell","termid":"FYPO:0004494"},{"relation_name":"is_a","term_name":"inviable swollen elongated multiseptate vegetative cell","termid":"FYPO:0006946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000004","FYPO:0000005","FYPO:0000032"],"is_obsolete":false,"name":"inviable branched, swollen, elongated, multiseptate vegetative cell","synonyms":[{"name":"inviable branched, elongated, swollen, multiseptate vegetative cell","type":"exact"},{"name":"inviable branched, swollen, elongated, multiseptate cell during vegetative growth","type":"exact"},{"name":"inviable branched, swollen, elongated, multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; branched, swollen, elongated, multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0004495"}


id: PBO:0041571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 202","termid":"PBO:0041571"}


id: PR:Q9US20
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slc1 gene.","definition_xrefs":["UniProtKB:Q9US20","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized acyltransferase C1851.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1851.02","synonyms":[{"name":"Spom972h-slc1","type":"exact"}],"termid":"PR:Q9US20"}


id: GO:0006040
data:
  {"annotated_genes":["SJAG_04868","SJAG_01443","SJAG_00519","SJAG_04728","SJAG_00978","SJAG_00620","SJAG_00442","SJAG_03723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84667,84839,98887,100748,84326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006031"},{"annotations":[97612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"},{"annotations":[84327,98789,84668,98890,57570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006048"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any amino sugar, sugars containing an amino group in place of a hydroxyl group.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00519":null,"SJAG_00620":null,"SJAG_00978":null,"SJAG_01443":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino sugar metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"amino sugar metabolism","type":"exact"},{"name":"aminosaccharide metabolic process","type":"exact"},{"name":"aminosaccharide metabolism","type":"exact"}],"termid":"GO:0006040","terms_by_termid":{"GO:0006031":null,"GO:0006032":null,"GO:0006048":null}}


id: PBO:0086489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative oxidoreductase involved in late endosome to Golgi transport; physical and genetical interactions with Btn2p; null mutant is viable, has extended S phase, and sensitive to expression of top1-T722A allele; similar to human FOXRED1","termid":"PBO:0086489"}


id: GO:1905803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to manganese ion.","definition_xrefs":["GOC:TermGenie","PMID:23721876","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to manganese ion","termid":"GO:1905802"},{"relation_name":"negatively_regulates","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to manganese ion","synonyms":[{"name":"down regulation of cellular response to manganese","type":"exact"},{"name":"down regulation of cellular response to manganese ion","type":"exact"},{"name":"down-regulation of cellular response to manganese","type":"exact"},{"name":"down-regulation of cellular response to manganese ion","type":"exact"},{"name":"downregulation of cellular response to manganese","type":"exact"},{"name":"downregulation of cellular response to manganese ion","type":"exact"},{"name":"inhibition of cellular response to manganese","type":"narrow"},{"name":"inhibition of cellular response to manganese ion","type":"narrow"},{"name":"negative regulation of cellular response to manganese","type":"exact"}],"termid":"GO:1905803"}


id: GO:0019450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including pyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"L-cysteine catabolic process","termid":"GO:0019448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-cysteine catabolic process to pyruvate","secondary_identifiers":["MetaCyc:LCYSDEG-PWY"],"synonyms":[{"name":"L-cysteine breakdown to pyruvate","type":"exact"},{"name":"L-cysteine degradation to pyruvate","type":"exact"}],"termid":"GO:0019450"}


id: PBO:0047360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 14","termid":"PBO:0047360"}


id: PBO:0086246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may form an active mitochondrial KHE system; mitochondrial inner-membrane protein; non-essential gene; KHE system stands for K+/H+ exchanger system","termid":"PBO:0086246"}


id: GO:1900882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 17-methylnonadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"17-methylnonadec-1-ene metabolic process","synonyms":[{"name":"17-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900882"}


id: PBO:0030392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monoseptate","termid":"PBO:0030392"}


id: PBO:0052943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 27-1","termid":"PBO:0052943"}


id: PBO:0061228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-POU domain containing octamer binding","termid":"PBO:0061228"}


id: GO:0038068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that contributes to cell wall organization or biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in cell wall organization or biogenesis (obsolete GO:0038068)","synonyms":[{"name":"MAP kinase kinase activity involved in cell wall biogenesis","type":"narrow"},{"name":"MAP2K activity involved in cell wall integrity","type":"exact"},{"name":"MAPKK activity involved in cell wall integrity","type":"exact"}],"termid":"GO:0038068"}


id: FYPO:0007857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of a protein to the spindle midzone is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division. The meiotic spindle midzone is the area in the center of the meiotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PomBase:mah","GO:1903096","PMID:34346498","GO:1990385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle during meiosis I","termid":"FYPO:0007750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle midzone during meiosis I","synonyms":[{"name":"normal protein localisation to meiotic spindle midzone during meiosis I","type":"exact"},{"name":"normal protein localization to meiosis I spindle midzone","type":"exact"},{"name":"normal protein localization to spindle midzone during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007857"}


id: FYPO:0003511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of L-ergothioneine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"},{"relation_name":"is_a","term_name":"decreased cellular L-ergothioneine level","termid":"FYPO:0003521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"L-ergothioneine absent from cell","termid":"FYPO:0003511"}


id: PBO:0068131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 438","termid":"PBO:0068131"}


id: PBO:0002881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein Pex22 (predicted)","termid":"PBO:0002881"}


id: PBO:0045668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYNAP pseuodgene 3","termid":"PBO:0045668"}


id: PBO:0027175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_septated_vegetative_cell","termid":"PBO:0027175"}


id: PBO:0052615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich coiled-coil 1","termid":"PBO:0052615"}


id: FYPO:0006686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA double-strand break resection is decreased. DNA double-strand break resection is the process by which long-tract single-stranded 3'-end DNA is generated by removal of bases from a 5' end from which SPO11/Rec12-oligonucleotide complexes have been removed.","definition_xrefs":["GO:0000729","PomBase:mah","PMID:21931565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased DNA double-strand break processing","synonyms":[{"name":"decreased DNA double-strand break resection","type":"exact"},{"name":"decreased DNA double-strand break resectioning","type":"exact"},{"name":"decreased DSB processing","type":"exact"},{"name":"reduced DNA double-strand break processing","type":"exact"}],"termid":"FYPO:0006686"}


id: PR:Q9P7I0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC105.02c gene.","definition_xrefs":["UniProtKB:Q9P7I0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat-containing protein C105.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC105.02c","synonyms":[{"name":"Spom972h-SPAC105.02c","type":"exact"}],"termid":"PR:Q9P7I0"}


id: PBO:0082278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anthranilate synthase; catalyzes the initial step of tryptophan biosynthesis, forms multifunctional hetero-oligomeric anthranilate synthase:indole-3-glycerol phosphate synthase enzyme complex with Trp3p","termid":"PBO:0082278"}


id: PBO:0061071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKD inhibitor of WNT signaling pathway 2","termid":"PBO:0061071"}


id: GO:0018312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer, from NAD, of ADP-ribose to peptidyl-serine to form peptidyl-O-(ADP-ribosyl)-L-serine.","definition_xrefs":["RESID:AA0237"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine ADP-ribosylation (obsolete GO:0018312)","termid":"GO:0018312"}


id: GO:0007508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the larval heart over time, from its formation to the mature structure. In Drosophila the larval heart (dorsal vessel) is a continuous tube of mesodormal cells that runs beneath the dorsal midline of the epidermis, divided into an anterior aorta and a posterior heart proper.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart development","termid":"GO:0007507"},{"relation_name":"part_of","term_name":"larval development","termid":"GO:0002164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval heart development","termid":"GO:0007508"}


id: PBO:0026820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_endosome","termid":"PBO:0026820"}


id: SO:0001174
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of three nucleotide bases in tRNA which recognizes a codon in mRNA.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"},{"relation_name":"part_of","term_name":"anticodon_loop","termid":"SO:0001173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anticodon","secondary_identifiers":["http://en.wikipedia.org/wiki/Anticodon"],"synonyms":[{"name":"anti-codon","type":"exact"}],"termid":"SO:0001174"}


id: PBO:0082348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; accelerates eIF4F-dependent assembly of 48S translation preinitiation complex (PIC), stimulating recruitment of mRNAs with long, structured 5'-UTRs; cooperates with DEAD-box RNA helicase and paralog Ded1p, stimulating PIC attachment and highly processive scanning by the 40S ribosomal subunit; protein abundance increases in response to DNA replication stress","termid":"PBO:0082348"}


id: GO:0004488
data:
  {"annotated_genes":["SJAG_00106","SJAG_01126","SJAG_04156"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100877,104448,108517],"is_not":false,"summary":null,"term":"GO:0004488"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NADP+ = 5,10-methenyltetrahydrofolate + NADPH.","definition_xrefs":["RHEA:22812","EC:1.5.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity","termid":"GO:0004486"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_01126":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:METHYLENETHFDEHYDROG-NADP-RXN","KEGG_REACTION:R01220"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:NADP oxidoreductase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0004488","terms_by_termid":{"GO:0004488":null}}


id: PBO:0081792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 722","termid":"PBO:0081792"}


id: PBO:0110975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inorganic diphosphatase, implicated in energy generation","termid":"PBO:0110975"}


id: PBO:0036245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase A regulatory subunit binding protein, regulator of G-protein signaling (RGS) domain (predicted)","termid":"PBO:0036245"}


id: PBO:0031067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_normal_germ_tube_morphology","termid":"PBO:0031067"}


id: PBO:0047653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 5","termid":"PBO:0047653"}


id: GO:0097183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and coagulation factor XI (F11); formation of the complex inhibits the serine protease activity of coagulation factor XI.","definition_xrefs":["GOC:ans","PMID:2844223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein C inhibitor-coagulation factor XI complex","synonyms":[{"name":"PCI-coagulation factor XI complex","type":"exact"},{"name":"SERPINA5-coagulation factor XI complex","type":"exact"},{"name":"plasma serine protease inhibitor-coagulation factor XI complex","type":"exact"},{"name":"protein C inhibitor-F11 complex","type":"exact"},{"name":"serpin A5-coagulation factor XI complex","type":"exact"}],"termid":"GO:0097183"}


id: GO:0051459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of corticotropic hormone from a cell.","definition_xrefs":["GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"corticotropin secretion","termid":"GO:0051458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of corticotropin secretion","synonyms":[{"name":"regulation of ACTH secretion","type":"exact"},{"name":"regulation of adrenocorticotropic hormone secretion","type":"exact"},{"name":"regulation of adrenocorticotropin secretion","type":"exact"},{"name":"regulation of adrenotropin hormone secretion","type":"exact"},{"name":"regulation of adrenotropin secretion","type":"exact"},{"name":"regulation of corticotropic hormone secretion","type":"exact"}],"termid":"GO:0051459"}


id: FYPO:0003289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to medial cortical node","synonyms":[{"name":"abnormal protein localisation to medial cortical node","type":"exact"},{"name":"abnormal protein localization to cortical medial dot","type":"exact"},{"name":"abnormal protein localization to cytokinetic nodes","type":"related"},{"name":"abnormal protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"abnormal protein localization to medial cortical nodes","type":"exact"},{"name":"abnormal protein recruitment to medial cortical node","type":"related"}],"termid":"FYPO:0003289"}


id: GO:0035066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the addition of an acetyl group to a histone protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone acetylation (obsolete GO:0035066)","synonyms":[{"name":"activation of histone acetylation","type":"narrow"},{"name":"stimulation of histone acetylation","type":"narrow"},{"name":"up regulation of histone acetylation","type":"exact"},{"name":"up-regulation of histone acetylation","type":"exact"},{"name":"upregulation of histone acetylation","type":"exact"}],"termid":"GO:0035066"}


id: GO:0050116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethylformamide + H2O = dimethylamine + formate.","definition_xrefs":["EC:3.5.1.56","RHEA:19517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N,N-dimethylformamidase activity","secondary_identifiers":["MetaCyc:NN-DIMETHYLFORMAMIDASE-RXN","KEGG_REACTION:R02509"],"synonyms":[{"name":"DMFase activity","type":"related"},{"name":"N,N-dimethylformamide amidohydrolase activity","type":"related"},{"name":"dimethylformamidase activity","type":"related"}],"termid":"GO:0050116"}


id: PBO:0042008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 63","termid":"PBO:0042008"}


id: GO:0019710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of peptidyl-asparagine to form peptidyl-N4-methyl-L-asparagine or peptidyl-N4,N4-dimethyl-L-asparagine.","definition_xrefs":["RESID:AA0070","RESID:AA0311"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-asparagine methylation (obsolete GO:0019710)","termid":"GO:0019710"}


id: GO:0140334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a lipopolysaccharide is transported to the cell outer membrane.","definition_xrefs":["PMID:24639492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid localization","termid":"GO:0010876"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"lipopolysaccharide localization to cell outer membrane","synonyms":[{"name":"LPS localization to cell outer membrane","type":"exact"}],"termid":"GO:0140334"}


id: PBO:0056753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL5 pseudogene 4","termid":"PBO:0056753"}


id: FYPO:0008118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mRNA splicing via the spliceosome is decreased for specific introns with longer than average (>21 bp) branch site to acceptor distance.","definition_xrefs":["PMID:36095128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome, intron-specific","termid":"FYPO:0003244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"decreased splicing of introns with branch point-distant 3’-splice site","synonyms":[{"name":"Inefficient excision of introns with branch point (BP)-distant 3’-splice site (ss)","type":"exact"}],"termid":"FYPO:0008118"}


id: GO:0018071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + L-cysteine = nicotinamide + N2-(ADP-D-ribosyl)-L-cysteine.","definition_xrefs":["EC:2.4.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"NAD(P)-cysteine ADP-ribosyltransferase activity","termid":"GO:0018071"}


id: PBO:0031608
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_G1_phase","termid":"PBO:0031608"}


id: PBO:0074654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 41B","termid":"PBO:0074654"}


id: GO:0034502
data:
  {"annotated_genes":["SJAG_00823","SJAG_05978","SJAG_03591","SJAG_00429","SJAG_02336","SJAG_04126","SJAG_04259","SJAG_01825","SJAG_01378","SJAG_02074","SJAG_01716","SJAG_03327","SJAG_00364","SJAG_01297","SJAG_03540","SJAG_00640","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87839,102342,102437,111423],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905412"},{"annotations":[103503],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905406"},{"annotations":[95819,102710,96960,107826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070198"},{"annotations":[97434,97899,109889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034501"},{"annotations":[100008,96490,114732,104363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[99429],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905634"}]},"cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, a specific location on a chromosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_00640":null,"SJAG_00823":null,"SJAG_01297":null,"SJAG_01378":null,"SJAG_01716":null,"SJAG_01825":null,"SJAG_02074":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03327":null,"SJAG_03540":null,"SJAG_03591":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to chromosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"condensin localization to chromosome","type":"narrow"},{"name":"protein localisation to chromosome","type":"exact"}],"termid":"GO:0034502","terms_by_termid":{"GO:0034501":null,"GO:0070198":null,"GO:0140210":null,"GO:1905406":null,"GO:1905412":null,"GO:1905634":null}}


id: PBO:0034045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_induces","termid":"PBO:0034045"}


id: PATO:0001451
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An extended swelling in plant organs caused primarily by an excessive accumulation of water.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001451 edematous (sensu botany) (obsolete PATO:0001451)","synonyms":[{"name":"edemic","type":"exact"},{"name":"oedematous","type":"exact"},{"name":"oedemic","type":"exact"}],"termid":"PATO:0001451"}


id: GO:0071419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amphetamine","termid":"GO:0001975"},{"relation_name":"is_a","term_name":"cellular response to amine stimulus","termid":"GO:0071418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to amphetamine","termid":"GO:0071419"}


id: PBO:0004192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF transcription factor complex subunit Cdc10","termid":"PBO:0004192"}


id: GO:1902804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle transport.","definition_xrefs":["GO_REF:0000058","GOC:kmv","PMID:23527112","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle transport","termid":"GO:1902803"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle transport","termid":"GO:0048489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle transport","synonyms":[{"name":"down regulation of synaptic vesicle fission","type":"related"},{"name":"down regulation of synaptic vesicle fusion","type":"related"},{"name":"down regulation of synaptic vesicle transport","type":"exact"},{"name":"down-regulation of synaptic vesicle fission","type":"related"},{"name":"down-regulation of synaptic vesicle fusion","type":"related"},{"name":"down-regulation of synaptic vesicle transport","type":"exact"},{"name":"downregulation of synaptic vesicle fission","type":"related"},{"name":"downregulation of synaptic vesicle fusion","type":"related"},{"name":"downregulation of synaptic vesicle transport","type":"exact"},{"name":"inhibition of synaptic vesicle fission","type":"related"},{"name":"inhibition of synaptic vesicle fusion","type":"related"},{"name":"inhibition of synaptic vesicle transport","type":"narrow"},{"name":"negative regulation of synaptic vesicle fission","type":"related"},{"name":"negative regulation of synaptic vesicle fusion","type":"related"}],"termid":"GO:1902804"}


id: GO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of branches are generated and organized. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of a branching structure","synonyms":[{"name":"branching morphogenesis","type":"exact"}],"termid":"GO:0001763"}


id: GO:0015113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrite (NO2-) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"nitrite transmembrane transporter activity","synonyms":[{"name":"nitrite/nitrate porter activity","type":"related"}],"termid":"GO:0015113"}


id: FYPO:0004321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"altered DNA level","termid":"FYPO:0004320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"altered DNA level during vegetative growth","synonyms":[{"name":"abnormal DNA content during vegetative growth","type":"exact"},{"name":"abnormal DNA level during vegetative growth","type":"exact"},{"name":"altered DNA content during vegetative growth","type":"exact"},{"name":"altered DNA level during mitotic cell cycle","type":"related"},{"name":"altered cellular DNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004321"}


id: GO:0050535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 6-O-(beta-D-xylopyranosyl)-beta-D-glucopyranoside + H2O = 6-O-(beta-D-xylopyranosyl)-beta-D-glucopyranose + an alcohol.","definition_xrefs":["RHEA:24480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"beta-primeverosidase activity","secondary_identifiers":["EC:3.2.1.149","MetaCyc:3.2.1.149-RXN"],"synonyms":[{"name":"6-O-(beta-D-xylopyranosyl)-beta-D-glucopyranoside 6-O-(beta-D-xylosyl)-beta-D-glucohydrolase activity","type":"related"},{"name":"b-primeverosidase activity","type":"exact"}],"termid":"GO:0050535"}


id: PBO:0063376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate cytidylyltransferase 2, ethanolamine","termid":"PBO:0063376"}


id: PBO:0072138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 15","termid":"PBO:0072138"}


id: PBO:0005269
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate disease gene for Armfield syndrome ortholog","termid":"PBO:0005269"}


id: PBO:0046828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 1","termid":"PBO:0046828"}


id: PBO:0044886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"density regulated re-initiation and release factor","termid":"PBO:0044886"}


id: PBO:0084857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; protein abundance increases in response to DNA replication stress","termid":"PBO:0084857"}


id: GO:0038002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of information from one cell to another, where an endocrine hormone is transported from the signal-producing cell to the receiving cell via the circulatory system (via blood, lymph or cerebrospinal fluid). The signaling cell and the receiving cell are often distant to each other.","definition_xrefs":["ISBN:0199264678","ISBN:3527303782","GOC:mtg_signaling_feb11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"endocrine process","termid":"GO:0050886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endocrine signaling","synonyms":[{"name":"endocrine signalling","type":"exact"}],"termid":"GO:0038002"}


id: FYPO:0000772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which perforations or gaps (other than nuclear pores) are present in the nuclear envelope.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002403","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"perforated nuclear envelope","synonyms":[{"name":"disrupted nuclear envelope","type":"related"},{"name":"disrupted nuclear membrane","type":"related"},{"name":"gapped nuclear envelope","type":"exact"},{"name":"perforated nuclear envelope during mitotic cell cycle","type":"related"},{"name":"perforated nuclear envelope during vegetative growth","type":"exact"},{"name":"perforated nuclear membrane","type":"related"},{"name":"permeabilized nucleus during mitosis","type":"exact"}],"termid":"FYPO:0000772"}


id: GO:1900949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isoprene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"positive regulation of isoprene metabolic process","termid":"GO:1900946"},{"relation_name":"is_a","term_name":"regulation of isoprene biosynthetic process","termid":"GO:1900947"},{"relation_name":"positively_regulates","term_name":"isoprene biosynthetic process","termid":"GO:0043612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of isoprene biosynthetic process","synonyms":[{"name":"activation of 2-methyl-1,3-butadiene biosynthesis","type":"narrow"},{"name":"activation of 2-methyl-1,3-butadiene biosynthetic process","type":"narrow"},{"name":"activation of hemiterpene biosynthesis","type":"narrow"},{"name":"activation of hemiterpene biosynthetic process","type":"narrow"},{"name":"activation of isoprene biosynthetic process","type":"narrow"},{"name":"positive regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"positive regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"positive regulation of hemiterpene biosynthesis","type":"exact"},{"name":"positive regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"up regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"up regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"up regulation of hemiterpene biosynthesis","type":"exact"},{"name":"up regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"up regulation of isoprene biosynthetic process","type":"exact"},{"name":"up-regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"up-regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"up-regulation of hemiterpene biosynthesis","type":"exact"},{"name":"up-regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"up-regulation of isoprene biosynthetic process","type":"exact"},{"name":"upregulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"upregulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"upregulation of hemiterpene biosynthesis","type":"exact"},{"name":"upregulation of hemiterpene biosynthetic process","type":"exact"},{"name":"upregulation of isoprene biosynthetic process","type":"exact"}],"termid":"GO:1900949"}


id: PBO:0003625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mrd1 (predicted)","termid":"PBO:0003625"}


id: PBO:0000278
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transmembrane helix","termid":"PBO:0000278"}


id: PBO:0043343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clock circadian regulator","termid":"PBO:0043343"}


id: GO:0050191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glycerate + GTP = 3-phospho-D-glyceroyl phosphate + GDP + H+.","definition_xrefs":["EC:2.7.2.10","RHEA:23332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phosphoglycerate kinase (GTP) activity","secondary_identifiers":["KEGG_REACTION:R01517","MetaCyc:PHOSPHOGLYCERATE-KINASE-GTP-RXN"],"synonyms":[{"name":"GTP:3-phospho-D-glycerate 1-phosphotransferase activity","type":"related"}],"termid":"GO:0050191"}


id: PBO:0089474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sec20","termid":"PBO:0089474"}


id: FYPO:0006632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more free fatty acids measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:30003614","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular free fatty acid level","synonyms":[{"name":"normal cellular fatty acid level","type":"exact"},{"name":"normal cellular free fatty acid level during mitotic cell cycle","type":"related"},{"name":"normal cellular free fatty acid level during vegetative growth","type":"exact"},{"name":"normal level of free fatty acids in cell","type":"exact"}],"termid":"FYPO:0006632"}


id: PBO:0017988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochindrial dynamin family GTPase Dnm1","termid":"PBO:0017988"}


id: GO:0060941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of an epicardial cell to a cardiac fibroblast cell fate and its capacity to differentiate into a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell fate commitment","termid":"GO:0060937"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac fibroblast cell differentiation","termid":"GO:0060938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac fibroblast cell fate commitment","termid":"GO:0060941"}


id: PBO:0084160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity zinc transporter of the plasma membrane; responsible for the majority of zinc uptake; transcription is induced under low-zinc conditions by the Zap1p transcription factor","termid":"PBO:0084160"}


id: PBO:0068311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF13 pseudogene 1","termid":"PBO:0068311"}


id: PATO:0001466
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the front of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved rostral","synonyms":[{"name":"curved anterior","type":"exact"},{"name":"curved superior (human torso)","type":"exact"}],"termid":"PATO:0001466"}


id: PBO:0044871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 3","termid":"PBO:0044871"}


id: PBO:0081682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 603, pseudogene","termid":"PBO:0081682"}


id: GO:0042849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-sorbose, the L-enantiomer of the ketohexose xylo-2-hexulose. L-sorbose is formed by bacterial oxidation of sorbitol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-sorbose metabolic process","termid":"GO:0019312"},{"relation_name":"is_a","term_name":"sorbose biosynthetic process","termid":"GO:0042847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-sorbose biosynthetic process","synonyms":[{"name":"L-sorbose anabolism","type":"exact"},{"name":"L-sorbose biosynthesis","type":"exact"},{"name":"L-sorbose formation","type":"exact"},{"name":"L-sorbose synthesis","type":"exact"}],"termid":"GO:0042849"}


id: GO:0007340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The discharge, by sperm, of a single, anterior secretory granule following the sperm's attachment to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents into the zona pellucida.","definition_xrefs":["PMID:21042299","PMID:3886029","GOC:dph","PMID:11175768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acrosome reaction","secondary_identifiers":["Wikipedia:Acrosome_reaction"],"termid":"GO:0007340"}


id: PBO:0084598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YKL158W was originally annotated as an independent ORF, but was later demonstrated to be an exon of an adjacent ORF, YKL157W","termid":"PBO:0084598"}


id: SO:0002212
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A self replicating linear nucleic acid molecule that is distinct from a chromosome in the organism. They are capped by terminal proteins covalently bound to the 5' ends of the DNA.","definition_xrefs":["SBOL:jb","PMID:21719542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid","termid":"SO:0000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_plasmid","synonyms":[{"name":"linear plasmid","type":"exact"}],"termid":"SO:0002212"}


id: PBO:0068428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, ribosomal 45S cluster 3","termid":"PBO:0068428"}


id: FYPO:0001823
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chlorpromazine. Cells stop growing (and may die) at a concentration of chlorpromazine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to chlorpromazine","synonyms":[{"name":"hypersensitive to chlorpromazine","type":"exact"},{"name":"sensitive to chlorpromazine during mitotic cell cycle","type":"related"},{"name":"sensitive to chlorpromazine during vegetative growth","type":"exact"}],"termid":"FYPO:0001823"}


id: GO:0006641
data:
  {"annotated_genes":["SJAG_04041","SJAG_02683","SJAG_02543","SJAG_03162","SJAG_01036","SJAG_02089","SJAG_02487","SJAG_03609","SJAG_02763","SJAG_02907"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86154,87564,108160,110283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019432"},{"annotations":[87993,90137,113657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"},{"annotations":[89770,110884,86232,87994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving triglyceride, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triglycerides are important components of plant oils, animal fats and animal plasma lipoproteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02683":null,"SJAG_02763":null,"SJAG_02907":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"triglyceride metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"triacylglycerol metabolic process","type":"exact"},{"name":"triacylglycerol metabolism","type":"exact"},{"name":"triglyceride metabolism","type":"exact"}],"termid":"GO:0006641","terms_by_termid":{"GO:0006642":null,"GO:0019432":null,"GO:0019433":null}}


id: GO:0075118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont alters or subverts the normal execution of a host G protein-coupled receptor signal transduction pathway. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host receptor-mediated signal transduction","termid":"GO:0075109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host G protein-coupled receptor signal transduction pathway","secondary_identifiers":["GO:0075121","GO:0075127","GO:0075124"],"synonyms":[{"name":"modulation by symbiont of host G protein-coupled receptor signal transduction","type":"exact"},{"name":"modulation by symbiont of host G-protein coupled receptor protein signal transduction","type":"exact"},{"name":"modulation by symbiont of host signal transduction mediated by G-protein alpha subunit","type":"narrow"},{"name":"modulation by symbiont of host signal transduction mediated by G-protein beta subunit","type":"narrow"},{"name":"modulation by symbiont of host signal transduction mediated by G-protein gamma subunit","type":"narrow"},{"name":"perturbation of host G protein-coupled receptor signal transduction pathway","type":"exact"}],"termid":"GO:0075118"}


id: PBO:0091716
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multistep PhosphoRelay","termid":"PBO:0091716"}


id: PBO:0049780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 14","termid":"PBO:0049780"}


id: PBO:0059788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 14","termid":"PBO:0059788"}


id: PBO:0054176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1549","termid":"PBO:0054176"}


id: PBO:0030450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_lysine_and_cysteine","termid":"PBO:0030450"}


id: PBO:0083831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ethanolamine kinase; primarily responsible for phosphatidylethanolamine synthesis via the CDP-ethanolamine pathway; exhibits some choline kinase activity, thus contributing to phosphatidylcholine synthesis via the CDP-choline pathway; EKI1 has a paralog, CKI1, that arose from the whole genome duplication","termid":"PBO:0083831"}


id: PR:P40387
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha,alpha-trehalose-phosphate synthase [UDP-forming] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01450","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.03","secondary_identifiers":["UniProtKB:P40387"],"synonyms":[{"name":"Spom972h-otsA","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40387"}


id: PBO:0084692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial dicarboxylate carrier; integral membrane protein, catalyzes a dicarboxylate-phosphate exchange across the inner mitochondrial membrane, transports cytoplasmic dicarboxylates into the mitochondrial matrix","termid":"PBO:0084692"}


id: PBO:0011485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human COMT catechol O-methyltransferase homolog 1","termid":"PBO:0011485"}


id: PBO:0062624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 1","termid":"PBO:0062624"}


id: PR:O14077
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An insulin-degrading enzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01213","PANTHER:PTHR11851:SF64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc protease mug138 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.12c","secondary_identifiers":["UniProtKB:O14077"],"synonyms":[{"name":"Spom972h-IDE","type":"exact"},{"name":"meiotically up-regulated gene 138 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14077"}


id: PBO:0053330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 161","termid":"PBO:0053330"}


id: FYPO:0005722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a mitotic spindle assembles and begins to elongate, but becomes curved during anaphase B and eventually collapses. The spindle pole bodies separate, but often become spatially closer together as the spindle elongates and curves.","definition_xrefs":["PomBase:vw","PMID:15147872","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle collapse","termid":"FYPO:0006475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000054","FYPO:0005447","FYPO:0000337","FYPO:0001320","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"mitotic spindle collapse during anaphase B elongation","synonyms":[{"name":"broken mitotic spindle during anaphase B elongation","type":"related"},{"name":"mitotic spindle breakage during anaphase B elongation","type":"exact"},{"name":"mitotic spindle collapse during elongation during anaphase B","type":"exact"},{"name":"mitotic spindle curvature and collapse during anaphase B","type":"exact"}],"termid":"FYPO:0005722"}


id: GO:0044656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the volume of a post-lysosomal vacuole, a membrane-bounded intracellular vesicle formed late in the endocytic pathway when the pH in the vacuole becomes neutral prior to exocytosis.","definition_xrefs":["PMID:22008230","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle size","termid":"GO:0097494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of post-lysosomal vacuole size","synonyms":[{"name":"regulation of post-lysosome size","type":"exact"},{"name":"regulation of postlysosomal vacuole size","type":"exact"},{"name":"regulation of postlysosome vacuole size","type":"exact"}],"termid":"GO:0044656"}


id: PBO:0089700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prevacuole/endosomal FYVE tethering component Pep7","termid":"PBO:0089700"}


id: GO:2000812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of barbed-end actin filament capping.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament polymerization","termid":"GO:0030833"},{"relation_name":"is_a","term_name":"regulation of actin filament depolymerization","termid":"GO:0030834"},{"relation_name":"regulates","term_name":"barbed-end actin filament capping","termid":"GO:0051016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0030036","GO:0065003","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of barbed-end actin filament capping","synonyms":[{"name":"regulation of barbed-end F-actin capping activity","type":"exact"},{"name":"regulation of barbed-end actin capping activity","type":"exact"},{"name":"regulation of plus-end F-actin capping activity","type":"exact"},{"name":"regulation of plus-end actin filament capping activity","type":"exact"}],"termid":"GO:2000812"}


id: FYPO:0001217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nuclear import is abnormal. Nuclear import is the directed movement of any substance out of the nucleus; import of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport during vegetative growth","termid":"FYPO:0000518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal nuclear import","synonyms":[{"name":"abnormal nuclear import during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear import during vegetative growth","type":"exact"}],"termid":"FYPO:0001217"}


id: FYPO:0002763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of tRNA (guanine(9)-N(1))-methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal tRNA (guanine(9)-N(1))-methyltransferase activity","termid":"FYPO:0002763"}


id: PBO:0067496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 632, pseudogene","termid":"PBO:0067496"}


id: PBO:0085613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA replication; component of the Mcm2-7 hexameric helicase complex that binds chromatin as a part of the pre-replicative complex","termid":"PBO:0085613"}


id: PBO:0002875
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.4.1","termid":"PBO:0002875"}


id: GO:0038071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein + ATP = protein phosphate + ADP by a mitogen-activated protein kinase, as part of a MAPK signaling cascade that contributes to conjugation with cellular fusion.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase activity involved in conjugation with cellular fusion (obsolete GO:0038071)","synonyms":[{"name":"MAPK activity involved in conjugation with cellular fusion","type":"exact"}],"termid":"GO:0038071"}


id: PBO:0003871
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.3.4","termid":"PBO:0003871"}


id: GO:0072766
data:
  {"annotated_genes":["SJAG_05196","SJAG_00727","SJAG_02737","SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85714,87445,98921,113031],"is_not":false,"summary":null,"term":"GO:0072766"}]},"cv_name":"biological_process","definition":"The process in which chromatin, or kinetochores are anchored to the nuclear envelope. This process involves the microtubule cytoskeleton, and nuclear tethering factors and is responsible for the Rabl-like configuration of chromosomes in the interphase nuclei.","definition_xrefs":["GOC:mah","PMID:21965289","PMID:23166349","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"},{"relation_name":"is_a","term_name":"centromere clustering","termid":"GO:0098653"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_01745":null,"SJAG_02737":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0007049","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"centromere clustering at the mitotic interphase nuclear envelope","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere clustering at the mitotic nuclear envelope","type":"related"},{"name":"centromere clustering at the nuclear periphery","type":"broad"},{"name":"centromere-SPB clustering","type":"broad"},{"name":"kinetochore clustering at SPB","type":"broad"},{"name":"kinetochore clustering at spindle pole body","type":"broad"},{"name":"kinetochore clustering at the old mitotic spindle pole body","type":"exact"},{"name":"kinetochore localization at spindle pole body","type":"broad"},{"name":"rabl configuration","type":"related"}],"termid":"GO:0072766","terms_by_termid":{"GO:0072766":null}}


id: GO:1905581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of low-density lipoprotein particle clearance.","definition_xrefs":["GOC:nc","GOC:TermGenie","GO_REF:0000058","GOC:BHF","PMID:22848640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"},{"relation_name":"is_a","term_name":"regulation of low-density lipoprotein particle clearance","termid":"GO:0010988"},{"relation_name":"positively_regulates","term_name":"low-density lipoprotein particle clearance","termid":"GO:0034383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of low-density lipoprotein particle clearance","synonyms":[{"name":"activation of LDL clearance","type":"narrow"},{"name":"activation of low-density lipoprotein particle clearance","type":"narrow"},{"name":"positive regulation of LDL clearance","type":"exact"},{"name":"up regulation of LDL clearance","type":"exact"},{"name":"up regulation of low-density lipoprotein particle clearance","type":"exact"},{"name":"up-regulation of LDL clearance","type":"exact"},{"name":"up-regulation of low-density lipoprotein particle clearance","type":"exact"},{"name":"upregulation of LDL clearance","type":"exact"},{"name":"upregulation of low-density lipoprotein particle clearance","type":"exact"}],"termid":"GO:1905581"}


id: GO:0050201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-fucose + ATP = beta-L-fucose 1-phosphate + ADP + 2 H+.","definition_xrefs":["RHEA:13241","EC:2.7.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"fucokinase activity","secondary_identifiers":["KEGG_REACTION:R03161","Reactome:R-HSA-6787540","MetaCyc:FUCOKINASE-RXN"],"synonyms":[{"name":"ATP:6-deoxy-L-galactose 1-phosphotransferase activity","type":"related"},{"name":"ATP:beta-L-fucose 1-phosphotransferase activity","type":"related"},{"name":"L-fucokinase activity","type":"related"},{"name":"L-fucose kinase activity","type":"related"},{"name":"fucokinase (phosphorylating) activity","type":"related"},{"name":"fucose kinase activity","type":"related"}],"termid":"GO:0050201"}


id: GO:0019752
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id: GO:0048593
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id: GO:0009028
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id: GO:0100013
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id: PBO:0074015
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id: PBO:0075294
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id: PBO:0028081
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id: PBO:0048490
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id: PBO:0111832
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id: SO:0002146
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id: GO:0045710
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id: GO:0045006
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id: PATO:0002259
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id: PBO:0076462
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id: PBO:0070650
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id: PBO:0090420
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id: GO:0050605
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id: GO:0047808
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id: GO:2001267
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id: PBO:0091163
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id: PBO:0038884
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id: MOD:01603
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 2x(15)N labeled L-lysine.","definition_xrefs":["URL:http://www.sigmaaldrich.com/catalog/ProductDetail.do?N4=609021|ALDRICH&N5=SEARCH_CONCAT_PNO|BRAND_KEY&F=SPEC&lang=en_US0.000000E+000","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(15)N labeled L-lysine","termid":"MOD:01603"}


id: PBO:0036354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated WD repeat protein Atg18c","termid":"PBO:0036354"}


id: PBO:0075833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatostatin receptor 1","termid":"PBO:0075833"}


id: PBO:0044013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 alpha 1 pseudogene 2","termid":"PBO:0044013"}


id: GO:1990590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex consisting of ATF1 and ATF4 subunits that is capable of binding to cAMP response element (CRE) (consensus: 5'-GTGACGT[AC][AG]-3') of the GRP78 (HSPA5) promoter. Involved in the ER stress response pathway.","definition_xrefs":["PMID:12871976","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ATF1-ATF4 transcription factor complex","termid":"GO:1990590"}


id: _global:contained_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X contained_by Y iff X starts after start of Y and X ends before end of Y.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contained_by","termid":"_global:contained_by"}


id: GO:0005686
data:
  {"annotated_genes":["SJAG_02279","SJAG_03954","SJAG_02304","SJAG_02843","SJAG_03210","SJAG_05208","SJAG_02469","SJAG_00539","SJAG_01327","SJAG_01452","SJAG_01819","SJAG_05240","SJAG_00498","SJAG_02185","SJAG_00322","SJAG_01008","SJAG_00504","SJAG_01870","SJAG_04079","SJAG_03547","SJAG_00313","SJAG_04318","SJAG_01301","SJAG_03460","SJAG_00577","SJAG_00147","SJAG_03070","SJAG_03245","SJAG_03469"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89138,89467,90271,91028,91282,91440,91711,91931,92439,97840,98519,98645,98743,101601,101955,102424,102519,102850,103983,104629,105599,106159,106723,108545,108752,108980,111024,111957,112499],"is_not":false,"summary":null,"term":"GO:0005686"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U2, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U2 snRNP, most of which remain associated with the U2 snRNA both while the U2 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["ISBN:0879695897","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00539":null,"SJAG_00577":null,"SJAG_01008":null,"SJAG_01301":null,"SJAG_01327":null,"SJAG_01452":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03245":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03954":null,"SJAG_04079":null,"SJAG_04318":null,"SJAG_05208":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"U2 snRNP","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"17S U2 snRNP","type":"narrow"},{"name":"snRNP U2","type":"exact"}],"termid":"GO:0005686","terms_by_termid":{"GO:0005686":null}}


id: SO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is tri-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K27_methylation_site","termid":"SO:0001732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_trimethylation_site","synonyms":[{"name":"H3K27 tri-methylation site","type":"exact"},{"name":"H3K27Me3","type":"related"}],"termid":"SO:0001709"}


id: GO:0051570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 methylation (obsolete GO:0051570)","termid":"GO:0051570"}


id: PBO:0081101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZEB1 antisense RNA 1","termid":"PBO:0081101"}


id: GO:1901246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lung ciliated cell differentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"lung ciliated cell differentiation","termid":"GO:0061141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lung ciliated cell differentiation","termid":"GO:1901246"}


id: GO:0004492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-methylmalonyl-CoA + H+ = CO2 + propanoyl-CoA or (2S)-ethylmalonyl-CoA + H+ = butanoyl-CoA + CO2.","definition_xrefs":["PMID:22016388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"methyl/ethyl malonyl-CoA decarboxylase activity","secondary_identifiers":["MetaCyc:METHYLMALONYL-COA-DECARBOXYLASE-RXN"],"synonyms":[{"name":"(S)-2-methyl-3-oxopropanoyl-CoA carboxy-lyase activity","type":"narrow"},{"name":"(S)-methylmalonyl-CoA carboxy-lyase (propanoyl-CoA-forming)","type":"narrow"},{"name":"(S)-methylmalonyl-CoA carboxy-lyase activity","type":"narrow"},{"name":"ethylmalonyl-CoA decarboxylase activity","type":"narrow"},{"name":"methylmalonyl-coenzyme A decarboxylase activity","type":"narrow"}],"termid":"GO:0004492"}


id: GO:1905046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","GOC:BHF","PMID:22393241","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of Schwann cell proliferation","termid":"GO:0010625"},{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"},{"relation_name":"positively_regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Schwann cell proliferation involved in axon regeneration","synonyms":[{"name":"activation of Schwann cell proliferation involved in axon regeneration","type":"narrow"},{"name":"up regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"up-regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"upregulation of Schwann cell proliferation involved in axon regeneration","type":"exact"}],"termid":"GO:1905046"}


id: PBO:0060474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox","termid":"PBO:0060474"}


id: MOD:02057
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-tryptophan residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-tryptophan residue","synonyms":[{"name":"XlnkTrp","type":"exact"}],"termid":"MOD:02057"}


id: PBO:0072537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 67","termid":"PBO:0072537"}


id: PBO:0086694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; in many strains, YML002W is continuous with YML003W, and is predicted to encode a single protein of 1090 aa with a full-length VPS9 domain; in strains S288C, W303, and CEN.PK, a single thymine residue is deleted near the 3' end of YML003W at ChrXIII:264337, causing a frameshift and premature stop codon, truncating YML003W","termid":"PBO:0086694"}


id: GO:0042001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotypes in a hermaphroditic organism's soma. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic sex determination","termid":"GO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hermaphrodite somatic sex determination","secondary_identifiers":["GO:0042002"],"termid":"GO:0042001"}


id: PR:Q9US59
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- skb5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shk1 kinase-binding protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.13","synonyms":[{"name":"Spom972h-skb5","type":"exact"}],"termid":"PR:Q9US59"}


id: FYPO:0004126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"abolished histone H3-K4 trimethylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 trimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me3 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004126"}


id: GO:1900363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mRNA polyadenylation.","definition_xrefs":["PMID:15121841","GOC:se","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mRNA polyadenylation (obsolete GO:1900363)","synonyms":[{"name":"regulation of cleavage and polyadenylylation specificity factor activity","type":"narrow"},{"name":"regulation of mRNA polyadenylylation","type":"exact"}],"termid":"GO:1900363"}


id: PBO:0061087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 5","termid":"PBO:0061087"}


id: GO:0052742
data:
  {"annotated_genes":["SJAG_04537","SJAG_01571","SJAG_01863","SJAG_05330","SJAG_00114","SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92809,89313,107224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004430"},{"annotations":[93705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016303"},{"annotations":[87942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052811"},{"annotations":[106086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000285"},{"annotations":[87943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016308"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a phosphatidylinositol = ADP + a phosphatidylinositol phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00638":null,"SJAG_01571":null,"SJAG_01863":null,"SJAG_04537":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"phosphatidylinositol kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1675773"],"synonyms":[{"name":"1-phosphatidylinositol kinase activity","type":"exact"}],"termid":"GO:0052742","terms_by_termid":{"GO:0000285":null,"GO:0004430":null,"GO:0016303":null,"GO:0016308":null,"GO:0052811":null}}


id: PBO:0050539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase 1","termid":"PBO:0050539"}


id: PR:O42647
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug94 gene.","definition_xrefs":["UniProtKB:O42647","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 94 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.07c","synonyms":[{"name":"Spom972h-mug94","type":"exact"}],"termid":"PR:O42647"}


id: PBO:0028844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_Mei2_nuclear_dot","termid":"PBO:0028844"}


id: PBO:0068569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 20, pseudogene","termid":"PBO:0068569"}


id: FYPO:0004216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which monomethylation of lysine at position 20 of histone H4 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H4-K20 monomethylation during vegetative growth","termid":"FYPO:0008179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H4-K20 monomethylation during vegetative growth","synonyms":[{"name":"abolished histone H4 K20 monomethylation during vegetative growth","type":"exact"},{"name":"abolished histone H4-K20 monomethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H4K20me1 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H4 K20 monomethylation during vegetative growth","type":"exact"},{"name":"histone H4-K20 monomethylation abolished during vegetative growth","type":"exact"},{"name":"histone H4-K20 monomethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004216"}


id: PBO:0044032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSPG4 pseudogene 1 Y-linked","termid":"PBO:0044032"}


id: FYPO:0005618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of repair of double-strand breaks formed as part of meiotic recombination is longer than normal.","definition_xrefs":["PMID:18378696","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination double-strand break repair","termid":"FYPO:0005139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0000293","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of meiotic recombination double-strand break repair","synonyms":[{"name":"increased duration of DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"increased duration of double-strand break repair during meiotic recombination","type":"exact"},{"name":"increased duration of double-strand break repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"prolonged meiotic recombination double-strand break repair","type":"exact"}],"termid":"FYPO:0005618"}


id: PBO:0061883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPA1 mitochondrial dynamin like GTPase","termid":"PBO:0061883"}


id: GO:1990702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi cis membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of Golgi cis cisterna membrane (obsolete GO:1990702)","synonyms":[{"name":"integral component of cis-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990702"}


id: GO:0035974
data:
  {"annotated_genes":["SJAG_01370","SJAG_03835","SJAG_03287","SJAG_02332","SJAG_04010","SJAG_05260","SJAG_02169","SJAG_00405","SJAG_00794","SJAG_02561","SJAG_05309","SJAG_03048","SJAG_03915","SJAG_01662","SJAG_01546","SJAG_03092","SJAG_00140","SJAG_04901","SJAG_02286","SJAG_01805","SJAG_01760","SJAG_02624","SJAG_02368","SJAG_00430","SJAG_05196","SJAG_01483","SJAG_02248","SJAG_00113","SJAG_04143","SJAG_02529","SJAG_01777","SJAG_03544","SJAG_02246","SJAG_02736"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83534,83890,85882,86830,87095,87389,88387,89890,89964,91308,91409,92871,92974,93683,95921,95922,95949,96013,96825,96944,96945,98454,98913,99018,100230,101179,105703,107313,107494,107521,108732,110031,110032,111210,113013,114199],"is_not":false,"summary":null,"term":"GO:0035974"}]},"cv_name":"cellular_component","definition":"The microtubule organizing center that forms as part of the meiotic cell cycle; functionally homologous to the animal cell centrosome.","definition_xrefs":["PMID:21775631","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00405":null,"SJAG_00430":null,"SJAG_00794":null,"SJAG_01370":null,"SJAG_01483":null,"SJAG_01546":null,"SJAG_01662":null,"SJAG_01760":null,"SJAG_01777":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02246":null,"SJAG_02248":null,"SJAG_02286":null,"SJAG_02332":null,"SJAG_02368":null,"SJAG_02529":null,"SJAG_02561":null,"SJAG_02624":null,"SJAG_02736":null,"SJAG_03048":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_03544":null,"SJAG_03835":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04143":null,"SJAG_04901":null,"SJAG_05196":null,"SJAG_05260":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005816"],"is_obsolete":false,"name":"meiotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0035974","terms_by_termid":{"GO:0035974":null}}


id: PBO:0026822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ubiquitin-specific_protease_activity","termid":"PBO:0026822"}


id: GO:0140602
data:
  {"annotated_genes":["SJAG_03300","SJAG_00178","SJAG_04855","SJAG_01374","SJAG_00082","SJAG_04187","SJAG_01837","SJAG_04768","SJAG_04055","SJAG_00471","SJAG_04140","SJAG_03161","SJAG_00302","SJAG_00335","SJAG_01186","SJAG_01805","SJAG_04601","SJAG_01408","SJAG_04645","SJAG_03048","SJAG_03745","SJAG_03543"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83626,84868,84869,85124,86108,87056,88334,89894,95138,98377,98459,100308,100397,101463,101826,107284,108142,108691,108692,108693,110981,111572,111573,112762],"is_not":false,"summary":null,"term":"GO:0140602"}]},"cv_name":"cellular_component","definition":"Inclusion bodies located at the nucleolar periphery where several nuclear factors are reversibly aggregated and sequestered during acute heat stress or starvation.","definition_xrefs":["PMID:37128864","PMID:33176152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear inclusion body","termid":"GO:0042405"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00178":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00471":null,"SJAG_01186":null,"SJAG_01374":null,"SJAG_01408":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03300":null,"SJAG_03543":null,"SJAG_03745":null,"SJAG_04055":null,"SJAG_04140":null,"SJAG_04187":null,"SJAG_04601":null,"SJAG_04645":null,"SJAG_04768":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nucleolar peripheral inclusion body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NuRs","type":"related"},{"name":"nucleolar ring","type":"narrow"}],"termid":"GO:0140602","terms_by_termid":{"GO:0140602":null}}


id: PBO:0040140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 3","termid":"PBO:0040140"}


id: SO:0000710
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding an mRNA that has the stop codon redefined as selenocysteine.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stop_codon_redefined_as_selenocysteine","termid":"SO:0000885"},{"relation_name":"is_a","term_name":"gene_with_stop_codon_read_through","termid":"SO:0000697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_stop_codon_redefined_as_selenocysteine","synonyms":[{"name":"gene with stop codon redefined as selenocysteine","type":"exact"}],"termid":"SO:0000710"}


id: FYPO:0007057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of substances via vesicles from recycling endosomes to the Golgi is abnormal.","definition_xrefs":["GO:0071955","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal recycling endosome to Golgi transport","synonyms":[{"name":"abnormal recycling endosome to Golgi transport during mitotic cell cycle","type":"related"},{"name":"abnormal recycling endosome to Golgi transport during vegetative growth","type":"exact"}],"termid":"FYPO:0007057"}


id: PBO:0040248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 4C cysteine peptidase","termid":"PBO:0040248"}


id: PBO:0026865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_double-strand_break_sites_during_mitotic_S_phase","termid":"PBO:0026865"}


id: PR:P0CT41
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-12 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.14","synonyms":[{"name":"Spom972h-Tf2-12","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT41"}


id: FYPO:0001806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which guanine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal guanine import","synonyms":[{"name":"normal guanine import across plasma membrane","type":"exact"},{"name":"normal guanine import during mitotic cell cycle","type":"related"},{"name":"normal guanine import during vegetative growth","type":"exact"},{"name":"normal guanine import into cell","type":"exact"},{"name":"normal guanine uptake","type":"exact"}],"termid":"FYPO:0001806"}


id: GO:1905592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of optical nerve axon regeneration.","definition_xrefs":["PMID:16699509","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of axon regeneration","termid":"GO:0048681"},{"relation_name":"is_a","term_name":"regulation of optical nerve axon regeneration","termid":"GO:1905591"},{"relation_name":"negatively_regulates","term_name":"optical nerve axon regeneration","termid":"GO:0101027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of optical nerve axon regeneration","synonyms":[{"name":"down regulation of optical nerve axon regeneration","type":"exact"},{"name":"down-regulation of optical nerve axon regeneration","type":"exact"},{"name":"downregulation of optical nerve axon regeneration","type":"exact"},{"name":"inhibition of optical nerve axon regeneration","type":"narrow"}],"termid":"GO:1905592"}


id: PBO:0004191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps52 (predicted)","termid":"PBO:0004191"}


id: GO:0010459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency or rate of heart contraction.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"negative regulation of heart contraction","termid":"GO:0045822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart rate","termid":"GO:0010459"}


id: GO:0090533
data:
  {"annotated_genes":["SJAG_02782","SJAG_01397","SJAG_02470","SJAG_01817","SJAG_00136","SJAG_03406","SJAG_01471","SJAG_01447","SJAG_05294","SJAG_01913","SJAG_02023","SJAG_04955","SJAG_04015","SJAG_00212","SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033176"},{"annotations":[88151,96036,86277,100013,85967,91763],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[97736,84170,98768,95014,96112,105967,114788,92720],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"Protein complex that carries out the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in).","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase dependent transmembrane transport complex","termid":"GO:0098533"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02470":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cation-transporting ATPase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090533","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0033176":null}}


id: GO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving carbon catabolites that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0000429"},{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription","termid":"GO:0045991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"carbon catabolite activation of transcription from RNA polymerase II promoter","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter by carbon catabolites","type":"exact"}],"termid":"GO:0000436"}


id: GO:0099645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a neurotransmitter is transported to, or maintained in, a location within the membrane adjacent to a postsynaptic specialization (e.g. postsynaptic density).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"},{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"is_a","term_name":"protein localization to postsynaptic specialization membrane","termid":"GO:0099633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter receptor localization to postsynaptic specialization membrane","synonyms":[{"name":"neurotransmitter receptor localisation in postsynaptic specialization membrane","type":"exact"}],"termid":"GO:0099645"}


id: PBO:0059974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 19","termid":"PBO:0059974"}


id: PBO:0079730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 7 (pseudogene)","termid":"PBO:0079730"}


id: GO:0001108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a component of the basal transcription machinery which is composed of a bacterial-type RNA polymerase core enzyme and a sigma factor, the minimal set of factors required for formation of the preinitiation complex (PIC) by a bacterial-type RNA polymerase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal transcription machinery binding","termid":"GO:0001098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"bacterial-type RNA polymerase holo enzyme binding","synonyms":[{"name":"basal bacterial-type RNA polymerase transcription machinery binding","type":"exact"}],"termid":"GO:0001108"}


id: PBO:0085663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in N-glycosylation; deletion mutation confers sensitivity to exidative stress and shows synthetic lethality with mutations in the spindle checkpoint genes BUB3 and MAD1; YNL080C is not an essential gene","termid":"PBO:0085663"}


id: GO:0008022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a protein C-terminus, the end of a peptide chain at which the 1-carboxyl function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete protein C-terminus binding (obsolete GO:0008022)","synonyms":[{"name":"C-terminal binding","type":"exact"},{"name":"C-terminal end binding","type":"exact"},{"name":"COOH-terminal binding","type":"narrow"},{"name":"COOH-terminus binding","type":"narrow"},{"name":"carboxy-terminal binding","type":"related"},{"name":"carboxy-terminus binding","type":"related"},{"name":"carboxyl-terminal binding","type":"related"},{"name":"carboxyl-terminus binding","type":"related"},{"name":"carboxylate-terminal binding","type":"related"},{"name":"carboxylate-terminus binding","type":"narrow"}],"termid":"GO:0008022"}


id: PBO:0073389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SETD4 antisense RNA 1","termid":"PBO:0073389"}


id: PBO:0063725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerophosphate synthase 1","termid":"PBO:0063725"}


id: FYECO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which naphthaleneacetic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ naphthaleneacetic acid","termid":"FYECO:0000267"}


id: GO:0019062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion protein binds to molecules on the host cellular surface or host cell surface projection.","definition_xrefs":["VZ:956","UniProtKB-KW:KW-1161","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virion attachment to host cell","synonyms":[{"name":"viral absorption","type":"exact"},{"name":"viral attachment to host cell","type":"related"},{"name":"virion attachment to host cell surface receptor","type":"narrow"}],"termid":"GO:0019062"}


id: PBO:0091286
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not complement S. cerevisiae NRD1","termid":"PBO:0091286"}


id: PBO:0045435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L2 pseudogene 3","termid":"PBO:0045435"}


id: PBO:0068308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 11 pseudogene 1","termid":"PBO:0068308"}


id: PBO:0052465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF11 divergent transcript","termid":"PBO:0052465"}


id: GO:0030281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of cutaneous epidermal structures such as hairs, scales, or feathers.","definition_xrefs":["ISBN:0878932437","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of cutaneous appendage","termid":"GO:0030281"}


id: GO:0046325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glucose transmembrane transport","termid":"GO:0010829"},{"relation_name":"is_a","term_name":"regulation of glucose import","termid":"GO:0046324"},{"relation_name":"negatively_regulates","term_name":"glucose import","termid":"GO:0046323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glucose import","synonyms":[{"name":"down regulation of glucose import","type":"exact"},{"name":"down-regulation of glucose import","type":"exact"},{"name":"downregulation of glucose import","type":"exact"},{"name":"inhibition of glucose import","type":"narrow"},{"name":"negative regulation of glucose uptake","type":"exact"}],"termid":"GO:0046325"}


id: PBO:0090143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor","termid":"PBO:0090143"}


id: PR:Q09747
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX19B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03286","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.06","secondary_identifiers":["UniProtKB:Q09747"],"synonyms":[{"name":"Spom972h-DDX19B","type":"exact"}],"termid":"PR:Q09747"}


id: PBO:0050439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein M","termid":"PBO:0050439"}


id: PBO:0060393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 2A","termid":"PBO:0060393"}


id: PBO:0089133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD/NADH kinase","termid":"PBO:0089133"}


id: PBO:0067460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 585, pseudogene","termid":"PBO:0067460"}


id: PR:Q9P7Q0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.05c gene.","definition_xrefs":["UniProtKB:Q9P7Q0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDT1-like protein C186.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.05c","synonyms":[{"name":"Spom972h-SPAC186.05c","type":"exact"}],"termid":"PR:Q9P7Q0"}


id: MOD:02058
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-tyrosine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-tyrosine residue","synonyms":[{"name":"XlnkTyr","type":"exact"}],"termid":"MOD:02058"}


id: PBO:0081522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 431","termid":"PBO:0081522"}


id: PBO:0039791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAF pseudogene 2","termid":"PBO:0039791"}


id: PBO:0085787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unconfirmed function; similar to cell surface flocculin Flo11p; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; in W303 strain one continuous open reading frame comprising of YDL037C, the intergenic region and YDL039C encodes the gene IMI1","termid":"PBO:0085787"}


id: FYPO:0005291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to zinc ion is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased RNA level during cellular response to zinc ion","synonyms":[{"name":"increased RNA accumulation during cellular response to zinc ion","type":"related"},{"name":"increased RNA level during cellular response to excess zinc ions","type":"narrow"},{"name":"increased RNA level during cellular response to zinc","type":"exact"},{"name":"increased RNA level during cellular response to zinc ion during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to zinc ion during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to zinc ion","type":"narrow"},{"name":"increased transcript level during cellular response to zinc ion","type":"exact"}],"termid":"FYPO:0005291"}


id: PBO:0041056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRD7 pseudogene 7","termid":"PBO:0041056"}


id: GO:0052809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a carbon-oxygen bond in acharan sulfate, a glycosaminoglycan with a uniformly repeating disaccharide structure of alpha-D-N-acetylglucosaminyl-2-O-sulfo-alpha-L-iduronic acid.","definition_xrefs":["GOC:mengo_curators","PMID:19566715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acharan sulfate lyase activity","termid":"GO:0052809"}


id: PBO:0112395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein She9/Mdm33","termid":"PBO:0112395"}


id: PBO:0058826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8056","termid":"PBO:0058826"}


id: GO:0017178
data:
  {"annotated_genes":["SJAG_04544"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107255],"is_not":false,"summary":null,"term":"GO:0017178"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + diphthine + NH4 = ADP + diphthamide + H+ + phosphate.","definition_xrefs":["RHEA:19753","EC:6.3.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04544":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diphthine-ammonia ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5358475","MetaCyc:DIPHTINE--AMMONIA-LIGASE-RXN","KEGG_REACTION:R03613"],"synonyms":[{"name":"diphthamide synthase activity","type":"related"},{"name":"diphthamide synthetase activity","type":"related"},{"name":"diphthine:ammonia ligase (ADP-forming)","type":"related"}],"termid":"GO:0017178","terms_by_termid":{"GO:0017178":null}}


id: PBO:0111350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophismin-like histone chaperone/CENP-A amino terminus domain (NTD) isomerase Ani1/Fkbp39","termid":"PBO:0111350"}


id: GO:0061716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a processed miRNA from the nucleus to the cytoplasm.","definition_xrefs":["PMID:15738428","PMID:21554756","GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA export from nucleus","termid":"GO:0006405"},{"relation_name":"is_a","term_name":"miRNA transport","termid":"GO:1990428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006913","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"miRNA export from nucleus","termid":"GO:0061716"}


id: PBO:0027196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubule_formation_from_nuclear_microtubules_following_spindle_microtubule_fragmentation","termid":"PBO:0027196"}


id: GO:1902873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of horizontal cell localization.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000058","PMID:16872597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of horizontal cell localization","termid":"GO:1902872"},{"relation_name":"negatively_regulates","term_name":"horizontal cell localization","termid":"GO:0035852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of horizontal cell localization","synonyms":[{"name":"down regulation of horizontal cell localisation","type":"exact"},{"name":"down regulation of horizontal cell localization","type":"exact"},{"name":"down regulation of horizontal cell positioning","type":"exact"},{"name":"down regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"down regulation of retinal horizontal cell positioning","type":"exact"},{"name":"down-regulation of horizontal cell localisation","type":"exact"},{"name":"down-regulation of horizontal cell localization","type":"exact"},{"name":"down-regulation of horizontal cell positioning","type":"exact"},{"name":"down-regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"down-regulation of retinal horizontal cell positioning","type":"exact"},{"name":"downregulation of horizontal cell localisation","type":"exact"},{"name":"downregulation of horizontal cell localization","type":"exact"},{"name":"downregulation of horizontal cell positioning","type":"exact"},{"name":"downregulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"downregulation of retinal horizontal cell positioning","type":"exact"},{"name":"inhibition of horizontal cell localisation","type":"narrow"},{"name":"inhibition of horizontal cell localization","type":"narrow"},{"name":"inhibition of horizontal cell positioning","type":"narrow"},{"name":"inhibition of laminar positioning of retinal horizontal cell","type":"narrow"},{"name":"inhibition of retinal horizontal cell positioning","type":"narrow"},{"name":"negative regulation of horizontal cell localisation","type":"exact"},{"name":"negative regulation of horizontal cell positioning","type":"exact"},{"name":"negative regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"negative regulation of retinal horizontal cell positioning","type":"exact"}],"termid":"GO:1902873"}


id: GO:1990266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a neutrophil within or between different tissues and organs of the body.","definition_xrefs":["PMID:1826836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte migration","termid":"GO:0097530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil migration","termid":"GO:1990266"}


id: PR:O74858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine--tRNA ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.08","secondary_identifiers":["UniProtKB:O74858"],"synonyms":[{"name":"LysRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lysS","type":"exact"},{"name":"lysyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74858"}


id: GO:0032709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-25 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-25 production","termid":"GO:0032669"},{"relation_name":"negatively_regulates","term_name":"interleukin-25 production","termid":"GO:0032629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-25 production","secondary_identifiers":["GO:0045533","GO:0150149"],"synonyms":[{"name":"down regulation of interleukin-25 production","type":"exact"},{"name":"down-regulation of interleukin-25 production","type":"exact"},{"name":"downregulation of interleukin-25 production","type":"exact"},{"name":"inhibition of interleukin-25 production","type":"narrow"},{"name":"negative regulation of IL-25 production","type":"exact"},{"name":"negative regulation of interleukin-25 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-25 secretion","type":"narrow"}],"termid":"GO:0032709"}


id: PBO:0034381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_synthesis_of","termid":"PBO:0034381"}


id: PBO:0113397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme; regulates nuclear/ER membrane association and activation of Pah1p, a phosphatidate phosphatase involved in the production of diacylglycerol DAG for lipid droplet biogenesis; phosphatase activity of the Nem1p-Spo7p complex is inhibited by Ice2p; regulates nuclear growth by controlling phospholipid biosynthesis; required for normal nuclear envelope morphology, premeiotic replication, and sporulation","termid":"PBO:0113397"}


id: GO:0090672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which telomerase RNA is transported to, or maintained in, a specific location.","definition_xrefs":["PMID:25467444","GOC:BHF_telomere","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"telomerase RNA localization","termid":"GO:0090672"}


id: PBO:0000939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHCH domain","termid":"PBO:0000939"}


id: GO:0039504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the normal execution of the adaptive immune response of the host organism, an immune response based on directed amplification of specific receptors for antigen produced through a somatic diversification process, and allowing for enhanced response to subsequent exposures to the same antigen (immunological memory).","definition_xrefs":["GOC:sp","GOC:add","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host immune response","termid":"GO:0052562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host adaptive immune response","synonyms":[{"name":"inhibition of host adaptive immune response by virus","type":"narrow"},{"name":"negative regulation of host adaptive immune response","type":"exact"},{"name":"negative regulation of host adaptive immunity","type":"exact"},{"name":"suppression by virus of host adaptive immune response","type":"narrow"},{"name":"suppression of host acquired immune response","type":"exact"}],"termid":"GO:0039504"}


id: PBO:0050758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 20","termid":"PBO:0050758"}


id: PBO:0078686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 1-2","termid":"PBO:0078686"}


id: GO:0000307
data:
  {"annotated_genes":["SJAG_03061","SJAG_00973","SJAG_03525","SJAG_03591","SJAG_02404","SJAG_05978","SJAG_03699","SJAG_04140","SJAG_03967","SJAG_01149","SJAG_03048","SJAG_02057","SJAG_00100","SJAG_00439","SJAG_01213","SJAG_03421","SJAG_01401","SJAG_01716"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84348,87836,97715,98450,100423,101090,101773,102046,102340,102433,104449,104966,105127,107276,113151],"is_not":false,"summary":null,"term":"GO:0000307"},{"annotations":[113079,107004,91910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[91911,107007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019908"},{"annotations":[105129,104969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"}]},"cv_name":"cellular_component","definition":"Cyclin-dependent protein kinases (CDKs) are enzyme complexes that contain a kinase catalytic subunit associated with a regulatory cyclin partner.","definition_xrefs":["PMID:11602261","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00439":null,"SJAG_00973":null,"SJAG_01149":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_01716":null,"SJAG_02057":null,"SJAG_02404":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03699":null,"SJAG_03967":null,"SJAG_04140":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin-dependent protein kinase holoenzyme complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CDK holoenzyme","type":"exact"}],"termid":"GO:0000307","terms_by_termid":{"GO:0000307":null,"GO:0019908":null,"GO:0070691":null,"GO:0070692":null}}


id: GO:1901402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole metabolic process","synonyms":[{"name":"down regulation of tetrapyrrole metabolic process","type":"exact"},{"name":"down regulation of tetrapyrrole metabolism","type":"exact"},{"name":"down-regulation of tetrapyrrole metabolic process","type":"exact"},{"name":"down-regulation of tetrapyrrole metabolism","type":"exact"},{"name":"downregulation of tetrapyrrole metabolic process","type":"exact"},{"name":"downregulation of tetrapyrrole metabolism","type":"exact"},{"name":"inhibition of tetrapyrrole metabolic process","type":"narrow"},{"name":"inhibition of tetrapyrrole metabolism","type":"exact"},{"name":"negative regulation of tetrapyrrole metabolism","type":"exact"}],"termid":"GO:1901402"}


id: SO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 79th residue (a lysine), from the start of the H3 histone protein is methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K79_methylation_site","synonyms":[{"name":"H3K79 methylation site","type":"exact"}],"termid":"SO:0001735"}


id: GO:0047763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 3,4-dihydroxy-trans-cinnamate = S-adenosyl-L-homocysteine + 3-methoxy-4-hydroxy-trans-cinnamate.","definition_xrefs":["EC:2.1.1.68","MetaCyc:CAFFEATE-O-METHYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"caffeate O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-1104","RHEA:20225"],"synonyms":[{"name":"S-adenosyl-L-methionine:3,4-dihydroxy-trans-cinnamate 3-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:caffeic acid-O-methyltransferase activity","type":"related"},{"name":"caffeate 3-O-methyltransferase activity","type":"related"},{"name":"caffeate methyltransferase activity","type":"related"}],"termid":"GO:0047763"}


id: PBO:0084223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSP70 family ATP-binding protein; involved in protein folding, vacuolar import of proteins; required for ubiquitin-dependent degradation of short-lived proteins; associated with chaperonin-containing T-complex; 98% identical to paralog Ssa1p with distinct functional specificity in propagation of yeast [URE3] prions and vacuolar-mediated degradation of gluconeogenesis enzymes; binds tRNA, has role in tRNA nuclear import during starvation","termid":"PBO:0084223"}


id: PBO:0077219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated 16 homolog pseudogene 2","termid":"PBO:0077219"}


id: GO:0102035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-methylpropanoyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = (2E)-2-methylpropenoyl-CoA + reduced [electron-transfer flavoprotein].","definition_xrefs":["PMID:3988734"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-methylpropanoyl-CoA dehydrogenase activity (obsolete GO:0102035)","termid":"GO:0102035"}


id: PBO:0030939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrion_inheritance","termid":"PBO:0030939"}


id: PR:O74971
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An autophagy protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03703","PRO:DNx","PANTHER:PTHR13040:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.10c","secondary_identifiers":["UniProtKB:O74971"],"synonyms":[{"name":"Spom972h-ATG5","type":"exact"},{"name":"meiotically up-regulated gene 77 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74971"}


id: PBO:0082528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall and vacuolar protein; required for wild-type resistance to vanadate; SVS1 has a paralog, SRL1, that arose from the whole genome duplication","termid":"PBO:0082528"}


id: GO:1903481
data:
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id: GO:0033261
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id: GO:0018297
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id: PBO:0003792
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id: PBO:0073479
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id: GO:0019693
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id: PR:Q9UT07
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id: GO:0061634
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id: GO:0003231
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id: PBO:0089286
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id: PBO:0018212
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id: PATO:0002481
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id: GO:0097696
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id: PR:O59714
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id: RO:0002156
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id: PBO:0077873
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id: PBO:0062752
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id: PBO:0039318
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id: FYPO:0005550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hydroxyurea is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein level during cellular response to hydroxyurea","synonyms":[{"name":"normal protein accumulation during cellular response to hydroxyurea","type":"related"},{"name":"normal protein level during cellular response to HU","type":"exact"},{"name":"normal protein level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0005550"}


id: GO:0110012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, a P-body.","definition_xrefs":["GOC:mah","PMID:28031482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to P-body","synonyms":[{"name":"protein localisation to P-body","type":"exact"},{"name":"protein localization to P body","type":"exact"},{"name":"protein localization to cytoplasmic mRNA processing body","type":"exact"}],"termid":"GO:0110012"}


id: PBO:0028901
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0028901"}


id: PBO:0086847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative quinone oxidoreductase; overexpression improves ethanol production and acid stress resistance; involved in copper metabolism; similar to Cochliobolus carbonum toxD gene","termid":"PBO:0086847"}


id: PBO:0077113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 22","termid":"PBO:0077113"}


id: GO:0021774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a ligand to a retinoic acid receptor in a precursor cell in the ventral spinal cord that contributes to the commitment of the precursor cell to an interneuron fate.","definition_xrefs":["GOC:tb","PMID:11262869","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in ventral spinal cord interneuron specification (obsolete GO:0021774)","synonyms":[{"name":"retinoic acid receptor signalling pathway involved in ventral spinal cord interneuron specification","type":"exact"}],"termid":"GO:0021774"}


id: GO:0072202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the metanephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mah","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in metanephros development","termid":"GO:0072202"}


id: PBO:0040396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit E2","termid":"PBO:0040396"}


id: PBO:0045905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 3","termid":"PBO:0045905"}


id: GO:1902032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in response to osmotic stress.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:18636113"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in response to osmotic stress (obsolete GO:1902032)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in osmotic response","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in osmotic stress response","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in response to osmotic stress","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in osmotic response","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in osmotic stress response","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in response to osmotic stress","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in osmotic response","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in osmotic stress response","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in response to osmotic stress","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in osmotic response","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in osmotic stress response","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in response to osmotic stress","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in osmotic response","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in osmotic stress response","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in response to osmotic stress","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in osmotic response","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in osmotic stress response","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in response to osmotic stress","type":"related"}],"termid":"GO:1902032"}


id: PR:Q09896
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A brain protein 44 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00081","PANTHER:PTHR14154:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate carrier 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.09","secondary_identifiers":["UniProtKB:Q09896"],"synonyms":[{"name":"MPC2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MPC2","type":"exact"}],"termid":"PR:Q09896"}


id: GO:0048025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA splicing","termid":"GO:0033119"},{"relation_name":"is_a","term_name":"regulation of mRNA splicing, via spliceosome","termid":"GO:0048024"},{"relation_name":"is_a","term_name":"negative regulation of mRNA processing","termid":"GO:0050686"},{"relation_name":"negatively_regulates","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"negative regulation of mRNA splicing, via spliceosome","secondary_identifiers":["GO:0035056"],"synonyms":[{"name":"down regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"down regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"down-regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"down-regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"downregulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"downregulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"inhibition of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"inhibition of nuclear mRNA splicing, via spliceosome","type":"narrow"},{"name":"negative regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"negative regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"negative regulation of pre-mRNA splicing","type":"broad"}],"termid":"GO:0048025"}


id: PBO:0055748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA regulator of Akt signaling associated with HCC and RCC","termid":"PBO:0055748"}


id: MOD:00952
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an aspartic acid and the following glycine residue with the formation of (2-aminosuccinimidyl)acetic acid and the loss of a water molecule.","definition_xrefs":["PubMed:10801322","RESID:AA0441#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"(2-aminosuccinimidyl)acetic acid","termid":"MOD:01628"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2-aminosuccinimidyl)acetic acid (Asp)","synonyms":[{"name":"(2-aminosuccinimidyl)acetic acid","type":"exact"},{"name":"(3-amino-2,5-dioxo-1-pyrrolidinyl)acetic acid","type":"exact"},{"name":"CROSSLNK (2-aminosuccinimidyl)acetic acid (Asp-Gly)","type":"exact"},{"name":"N-(2-aminosuccinyl)glycine","type":"exact"},{"name":"[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]acetic acid","type":"exact"},{"name":"anhydroaspartyl glycine","type":"exact"},{"name":"aspartimide glycine","type":"exact"}],"termid":"MOD:00952"}


id: GO:1901797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction by p53 class mediator.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of signal transduction by p53 class mediator","synonyms":[{"name":"down regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"down-regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"downregulation of signal transduction by p53 class mediator","type":"exact"},{"name":"inhibition of signal transduction by p53 class mediator","type":"narrow"}],"termid":"GO:1901797"}


id: PBO:0052441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 1","termid":"PBO:0052441"}


id: SO:0000425
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The long terminal repeat found at the five-prime end of the sequence to be inserted into the host genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"long_terminal_repeat","termid":"SO:0000286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_LTR","synonyms":[{"name":"5' LTR","type":"exact"},{"name":"5' long terminal repeat","type":"exact"},{"name":"five prime LTR","type":"exact"}],"termid":"SO:0000425"}


id: PBO:0077791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase II binding protein 1","termid":"PBO:0077791"}


id: PBO:0063737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 2","termid":"PBO:0063737"}


id: GO:2000450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD8-positive, alpha-beta T cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell extravasation","termid":"GO:2000408"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000449"},{"relation_name":"negatively_regulates","term_name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000450"}


id: PBO:0085512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S15A and bacterial S8; RPS22A has a paralog, RPS22B, that arose from the whole genome duplication","termid":"PBO:0085512"}


id: GO:0070957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a gram-negative bacterium by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of gram-negative bacterium","termid":"GO:0070951"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated killing of bacterium","termid":"GO:0070956"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of gram-negative bacterium","termid":"GO:0070945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of gram-negative bacterium","synonyms":[{"name":"down regulation of neutrophil mediated killing of gram-negative bacterium","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of gram-negative bacterium","type":"exact"},{"name":"downregulation of neutrophil mediated killing of gram-negative bacterium","type":"exact"},{"name":"inhibition of neutrophil mediated killing of gram-negative bacterium","type":"narrow"}],"termid":"GO:0070957"}


id: GO:0006235
data:
  {"annotated_genes":["SJAG_04665","SJAG_04657","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85499,88534,114090],"is_not":false,"summary":null,"term":"GO:0006235"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dTTP, deoxyribosylthymine triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate biosynthetic process","termid":"GO:0009212"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dTTP metabolic process","termid":"GO:0046075"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dTTP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dTTP anabolism","type":"exact"},{"name":"dTTP biosynthesis","type":"exact"},{"name":"dTTP formation","type":"exact"},{"name":"dTTP synthesis","type":"exact"}],"termid":"GO:0006235","terms_by_termid":{"GO:0006235":null}}


id: GO:0120108
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111770],"is_not":false,"summary":null,"term":"GO:0120108"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (DNA)-3'-diphospho-5'-guanosine + H2O = (DNA)-3'-phosphate + GMP.","definition_xrefs":["PMID:26007660","RHEA:52140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"DNA-3'-diphospho-5'-guanosine diphosphatase","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.72"],"synonyms":[{"name":"DNA-3'pp5'G guanylate hydrolase","type":"exact"}],"termid":"GO:0120108","terms_by_termid":{"GO:0120108":null}}


id: GO:0018175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a nucleotide to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein nucleotidylation","synonyms":[{"name":"protein amino acid nucleotidylation","type":"exact"}],"termid":"GO:0018175"}


id: PBO:0053533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 534","termid":"PBO:0053533"}


id: PBO:0089904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThiJ domain protein, implicated in cellular detoxification","termid":"PBO:0089904"}


id: PBO:0069634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 911, pseudogene","termid":"PBO:0069634"}


id: PBO:0029275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_hydroxyurea","termid":"PBO:0029275"}


id: PBO:0034098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-realized_in","termid":"PBO:0034098"}


id: GO:0072126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in kidney development","termid":"GO:1901724"},{"relation_name":"positively_regulates","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glomerular mesangial cell proliferation","termid":"GO:0072126"}


id: PBO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (predicted)","termid":"PBO:0001076"}


id: GO:0038009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction by the movement of a signaling receptor from the plasma membrane to the inside of the cell. Receptor internalization can have a positive or negative effect on a signaling pathway.","definition_xrefs":["GOC:bf","PMID:19696798","PMID:17011816","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0016192","GO:0023052"],"is_obsolete":false,"name":"regulation of signal transduction by receptor internalization","synonyms":[{"name":"regulation of signaling pathway by receptor endocytosis","type":"exact"}],"termid":"GO:0038009"}


id: FYPO:0000570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mating projection assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000301","FYPO:0000002"],"is_obsolete":false,"name":"decreased shmoo formation","synonyms":[{"name":"decreased conjugation tube formation","type":"exact"},{"name":"decreased mating projection assembly","type":"exact"},{"name":"decreased mating projection formation","type":"exact"},{"name":"decreased shmoo assembly","type":"exact"},{"name":"reduced shmoo formation","type":"exact"},{"name":"shmoo formation: decreased","type":"related"}],"termid":"FYPO:0000570"}


id: GO:0032110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein histidine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein histidine kinase activity","termid":"GO:0032110"}


id: PBO:0042260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 4 pseudogene 2","termid":"PBO:0042260"}


id: GO:0006245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of TDP, ribosylthymine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"TDP metabolic process","termid":"GO:0046043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"TDP catabolic process","synonyms":[{"name":"TDP breakdown","type":"exact"},{"name":"TDP catabolism","type":"exact"},{"name":"TDP degradation","type":"exact"}],"termid":"GO:0006245"}


id: PBO:0111777
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type","termid":"PBO:0111777"}


id: PBO:0045040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyskerin pseudouridine synthase 1","termid":"PBO:0045040"}


id: PBO:0088616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein, TspO/MBR-related, implicated in lipid/sterol transport, tspO","termid":"PBO:0088616"}


id: PBO:0004350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein Lsm4 (predicted)","termid":"PBO:0004350"}


id: GO:0098632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding by a cell-adhesion protein on the cell surface to an extracellular matrix component, to mediate adhesion of the cell to another cell.","definition_xrefs":["Wikipedia:Cell_adhesion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion mediator activity","termid":"GO:0098631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0098631","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"cell-cell adhesion mediator activity","synonyms":[{"name":"cell-cell adhesion molecule","type":"exact"},{"name":"protein binding involved in cell-cell adhesion","type":"exact"}],"termid":"GO:0098632"}


id: PBO:0029039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glycerol_level","termid":"PBO:0029039"}


id: PBO:0088308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Svf1 family protein, lipocalin superfamily Svf2","termid":"PBO:0088308"}


id: PBO:0109599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARB2 cotranscriptional regulator A","termid":"PBO:0109599"}


id: FYPO:0005017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which ribosome biogenesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal ribosome biogenesis","synonyms":[{"name":"abnormal ribosome biogenesis during mitotic cell cycle","type":"related"},{"name":"abnormal ribosome biogenesis during vegetative growth","type":"exact"}],"termid":"FYPO:0005017"}


id: PBO:0073002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 3","termid":"PBO:0073002"}


id: PBO:0003648
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.9","termid":"PBO:0003648"}


id: PBO:0113343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase required for mitotic exit; required for rDNA segregation, cytokinesis, meiosis I spindle disassembly, environmental stress response, autophagy during meiosis; downregulates microautophagy induction after TORC1 inactivation; held in nucleolus by Cdc55p in early meiosis, liberated by FEAR and Mitotic Exit Network in anaphase; sequestered in metaphase II, released upon entry into anaphase II; human homolog CDC14A can complement thermosensitivity of cdc14-1 mutant","termid":"PBO:0113343"}


id: PBO:0003821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in respiratory chain complex IV assembly Coa1 (predicted)","termid":"PBO:0003821"}


id: PBO:0073449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted frizzled related protein 4","termid":"PBO:0073449"}


id: PBO:0044915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol O-acyltransferase 2 like 6","termid":"PBO:0044915"}


id: GO:0044476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a low voltage-gated calcium channel in the bitten organism.","definition_xrefs":["GOC:jl","PMID:20920515","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in negative regulation of voltage-gated calcium channel activity in another organism","termid":"GO:0044474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of low voltage-gated calcium channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of low voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044476"}


id: PBO:0051734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 5","termid":"PBO:0051734"}


id: GO:0043670
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner layer of the ectexine.","definition_xrefs":["PMID:28904424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ectexine","termid":"GO:0043669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"foot layer","synonyms":[{"name":"nexine 1","type":"exact"}],"termid":"GO:0043670"}


id: PBO:0004886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid cohesion protein/DNA polymerase eta Eso1","termid":"PBO:0004886"}


id: FYPO:0008209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 is normal at the  silent mating-type cassette (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0003224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K14 acetylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0008209"}


id: GO:0047015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 2-methyl-3-hydroxybutyryl-CoA = NADH + H+ + 2-methylaceto-acetyl-CoA.","definition_xrefs":["MetaCyc:1.1.1.178-RXN","EC:1.1.1.178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity","secondary_identifiers":["RHEA:13281"],"synonyms":[{"name":"(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA:NAD+ oxidoreductase activity","type":"related"},{"name":"2-methyl-3-hydroxy-butyryl CoA dehydrogenase activity","type":"related"},{"name":"2-methyl-3-hydroxybutyryl coenzyme A dehydrogenase activity","type":"related"},{"name":"2-methyl-3-hydroxybutyryl-CoA dehydrogenase activity","type":"related"}],"termid":"GO:0047015"}


id: PBO:0063649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 6","termid":"PBO:0063649"}


id: PBO:0051053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2-21","termid":"PBO:0051053"}


id: GO:1902238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator.","definition_xrefs":["GOC:mtg_apoptosis","GOC:krc","GOC:TermGenie","PMID:16571598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:1902218"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902253"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1990127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1902238"}


id: PBO:0084186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone E3 ligase, component of CORVET membrane tethering complex; peripheral vacuolar membrane protein required for protein trafficking and vacuole biogenesis; interacts with Pep7p; involved in ubiquitination and degradation of excess histones","termid":"PBO:0084186"}


id: GO:0060995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the kidney over time, from its formation to the mature organ.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling involved in kidney development","synonyms":[{"name":"cell-cell signalling involved in kidney development","type":"exact"}],"termid":"GO:0060995"}


id: GO:1901532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hematopoietic progenitor cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hematopoietic progenitor cell differentiation","synonyms":[{"name":"regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"regulation of hemopoietic progenitor cell differentiation","type":"exact"}],"termid":"GO:1901532"}


id: PBO:0090203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nob1","termid":"PBO:0090203"}


id: PBO:0043623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catechol-O-methyltransferase","termid":"PBO:0043623"}


id: PBO:0090334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane guanine and adenine transmembrane transporter","termid":"PBO:0090334"}


id: PBO:0030352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_export_during_cellular_hypotonic_salinity_response","termid":"PBO:0030352"}


id: GO:1900445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to biotic stimulus.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900430"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:1900443"},{"relation_name":"positively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:0036180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","synonyms":[{"name":"activation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"narrow"},{"name":"up regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"up-regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"upregulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"}],"termid":"GO:1900445"}


id: PBO:0017765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide-nucleotide adenylyltransferase (predicted)","termid":"PBO:0017765"}


id: FYPO:0004480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a calcineurin-dependent response element (CDRE)-containing promoter is decreased during a cellular response to micafungin.","definition_xrefs":["PMID:16928959","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased transcription from CDRE promoter in response to micafungin","synonyms":[{"name":"decreased transcription from CDRE promoter during cellular response to micafungin","type":"exact"},{"name":"decreased transcription from CDRE promoter in response to micafungin during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CDRE promoter in response to micafungin during vegetative growth","type":"exact"},{"name":"reduced transcription from CDRE promoter in response to micafungin","type":"exact"}],"termid":"FYPO:0004480"}


id: PBO:0031112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pleiotropic_effects_(obsolete_FYPO:0000261)","termid":"PBO:0031112"}


id: GO:0002360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lymphoid progenitor cell becomes committed to becoming any type of T cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell lineage commitment","synonyms":[{"name":"T lymphocyte lineage commitment","type":"exact"},{"name":"T-cell lineage commitment","type":"exact"},{"name":"T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002360"}


id: PBO:0076575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 3","termid":"PBO:0076575"}


id: PBO:0041415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 7 open reading frame 50","termid":"PBO:0041415"}


id: PBO:0047450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor and transporter","termid":"PBO:0047450"}


id: GO:0034986
data:
  {"annotated_genes":["SJAG_03862","SJAG_01418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96675,109984],"is_not":false,"summary":null,"term":"GO:0034986"}]},"cv_name":"molecular_function","definition":"Directly binding to and delivering iron ions to a target protein.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone activity","termid":"GO:0016530"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01418":null,"SJAG_03862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"iron chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034986","terms_by_termid":{"GO:0034986":null}}


id: GO:0033863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 1,5-diphosphate + ATP = 5-phospho-alpha-D-ribose 1-diphosphate + ADP + H+.","definition_xrefs":["RHEA:20109","EC:2.7.4.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"ribose 1,5-bisphosphate phosphokinase activity","secondary_identifiers":["KEGG_REACTION:R06836","MetaCyc:RXN0-1401"],"synonyms":[{"name":"ATP:ribose-1,5-bisphosphate phosphotransferase activity","type":"related"},{"name":"PhnN","type":"related"},{"name":"ribose 1,5-bisphosphokinase activity","type":"related"}],"termid":"GO:0033863"}


id: PBO:0003063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan endo-1,6-alpha-mannosidase (predicted)","termid":"PBO:0003063"}


id: GO:0098525
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuromuscular junction that functions in the excitation of somatic muscle myotubes, such as an arthropod somatic muscle cells.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory neuromuscular junction","termid":"GO:0098520"},{"relation_name":"is_a","term_name":"neuromuscular junction of somatic muscle myotube","termid":"GO:0098524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"excitatory neuromuscular junction of somatic myotube","termid":"GO:0098525"}


id: GO:0038164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the glycoprotein thrombopoietin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:19630807","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"thrombopoietin receptor activity","termid":"GO:0038164"}


id: PBO:0066736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 33","termid":"PBO:0066736"}


id: PBO:0078788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 11-2","termid":"PBO:0078788"}


id: GO:0120069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of any stomach fundus smooth muscle contraction.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stomach fundus smooth muscle contraction","termid":"GO:0120068"},{"relation_name":"is_a","term_name":"positive regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904306"},{"relation_name":"positively_regulates","term_name":"stomach fundus smooth muscle contraction","termid":"GO:0014825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stomach fundus smooth muscle contraction","termid":"GO:0120069"}


id: GO:0015220
data:
  {"annotated_genes":["SJAG_00763"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111254],"is_not":false,"summary":null,"term":"GO:0015220"}]},"cv_name":"molecular_function","definition":"Enables the transfer of choline from one side of a membrane to the other. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"choline transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6797956","Reactome:R-HSA-444433","GO:0005306","Reactome:R-HSA-5658483","Reactome:R-HSA-429594"],"synonyms":[{"name":"amino acid/choline transmembrane transporter activity","type":"narrow"},{"name":"choline permease activity","type":"exact"}],"termid":"GO:0015220","terms_by_termid":{"GO:0015220":null}}


id: GO:0044484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with fibrinolysis, a process that solubilizes fibrin, chiefly by the proteolytic action of plasmin, in the bloodstream of the bitten/stung organism.","definition_xrefs":["GOC:fj","PMID:17544404","PMID:17433397","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in impairment of hemostasis in another organism","termid":"GO:0044483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in fibrinolysis in another organism","synonyms":[{"name":"envenomation resulting in fibrinolysis in other organism","type":"exact"}],"termid":"GO:0044484"}


id: PBO:0042436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 antisense RNA 1","termid":"PBO:0042436"}


id: PBO:0074946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 110","termid":"PBO:0074946"}


id: PBO:0039924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 26","termid":"PBO:0039924"}


id: GO:0031347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a defense response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response","termid":"GO:0031347"}


id: PBO:0072284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 2","termid":"PBO:0072284"}


id: PBO:0044725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 13 (pseudogene)","termid":"PBO:0044725"}


id: GO:0072482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle spindle orientation checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic spindle checkpoint signaling","termid":"GO:0072476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic cell cycle spindle orientation checkpoint signaling","synonyms":[{"name":"mitotic cell cycle spindle orientation checkpoint effector process","type":"exact"},{"name":"response to signal involved in mitotic cell cycle spindle orientation checkpoint","type":"exact"}],"termid":"GO:0072482"}


id: SO:0000582
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding an rRNA cleavage snoRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA_cleavage_snoRNA_primary_transcript","synonyms":[{"name":"rRNA cleavage snoRNA primary transcript","type":"exact"}],"termid":"SO:0000582"}


id: PBO:0050957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon kappa","termid":"PBO:0050957"}


id: GO:1990950
data:
  {"annotated_genes":["SJAG_00145","SJAG_00666","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96237,98393],"is_not":false,"summary":null,"term":"GO:1990950"},{"annotations":[91264],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis II.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"},{"relation_name":"is_a","term_name":"meiosis II cell cycle process","termid":"GO:0061983"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"metaphase/anaphase transition of meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiosis II metaphase/anaphase transition","type":"exact"},{"name":"second meiotic metaphase/anaphase transition","type":"related"}],"termid":"GO:1990950","terms_by_termid":{"GO:1905191":null,"GO:1990950":null}}


id: PBO:0061801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ODF2 antisense RNA 1","termid":"PBO:0061801"}


id: FYPO:0005679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deubiquitination of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal after cells have been exposed to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:27151298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein deubiquitination following cellular response to hydroxyurea during vegetative growth","synonyms":[{"name":"decreased protein deubiquitination during cellular response to hydroxyurea","type":"related"},{"name":"decreased protein deubiquitination following cellular response to HU","type":"exact"},{"name":"decreased protein deubiquitination following cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein deubiquitylation following cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein deubiquitination following cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005679"}


id: FYPO:0003205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a primary septum that is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased septum thickness","termid":"FYPO:0006900"},{"relation_name":"output_of","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000032","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased primary cell septum thickness","synonyms":[{"name":"decreased primary cell septum thickness during mitotic cell cycle","type":"related"},{"name":"decreased primary cell septum thickness during vegetative growth","type":"exact"},{"name":"decreased primary septum thickness","type":"exact"},{"name":"reduced primary cell septum thickness","type":"exact"},{"name":"thin primary septum","type":"exact"}],"termid":"FYPO:0003205"}


id: FYPO:0004088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the morphology of cytoplasmic microtubules is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abnormal cytoplasmic microtubules","synonyms":[{"name":"abnormal cytoplasmic microtubule morphology","type":"exact"},{"name":"abnormal cytoplasmic microtubule structure","type":"narrow"},{"name":"abnormal cytoplasmic microtubules during mitotic cell cycle","type":"related"},{"name":"abnormal cytoplasmic microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004088"}


id: GO:0010902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of very-low-density lipoprotein particle remodeling. Very-low-density lipoprotein particle remodeling is the acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle remodeling","termid":"GO:0010901"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"very-low-density lipoprotein particle remodeling","termid":"GO:0034372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of very-low-density lipoprotein particle remodeling","synonyms":[{"name":"positive regulation of VLDL remodeling","type":"exact"},{"name":"positive regulation of VLDL remodelling","type":"exact"},{"name":"positive regulation of very-low-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0010902"}


id: GO:0003186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the tricuspid valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve morphogenesis","termid":"GO:0003181"},{"relation_name":"part_of","term_name":"tricuspid valve development","termid":"GO:0003175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tricuspid valve morphogenesis","termid":"GO:0003186"}


id: GO:0018873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving atrazine, a triazine ring-containing compound, widely used as a herbicide.","definition_xrefs":["UM-BBD_pathwayID:atr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"},{"relation_name":"is_a","term_name":"s-triazine compound metabolic process","termid":"GO:0018965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrazine metabolic process","synonyms":[{"name":"atrazine metabolism","type":"exact"}],"termid":"GO:0018873"}


id: GO:0006024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars.","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan biosynthetic process","termid":"GO:0006023"},{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosaminoglycan biosynthetic process","synonyms":[{"name":"glycosaminoglycan anabolism","type":"exact"},{"name":"glycosaminoglycan biosynthesis","type":"exact"},{"name":"glycosaminoglycan formation","type":"exact"},{"name":"glycosaminoglycan synthesis","type":"exact"}],"termid":"GO:0006024"}


id: PBO:0043143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 11","termid":"PBO:0043143"}


id: PBO:0067074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 105, pseudogene","termid":"PBO:0067074"}


id: PR:000027509
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-phase inducer phosphatase unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:9774107","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-phase inducer phosphatase","termid":"PR:000027506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase inducer phosphatase unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC24H6.05","synonyms":[{"name":"Spom-cdc25/UnMod","type":"exact"}],"termid":"PR:000027509"}


id: PBO:0040868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bcl2 modifying factor","termid":"PBO:0040868"}


id: PBO:0004745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Grn1","termid":"PBO:0004745"}


id: GO:1902694
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of superoxide dismutase copper chaperone activity.","definition_xrefs":["GO_REF:0000088","GOC:TermGenie","GOC:bhm","PMID:10426947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone complex","termid":"GO:1902695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"superoxide dismutase copper chaperone complex","termid":"GO:1902694"}


id: PBO:0082295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginyl-tRNA-protein transferase; catalyzes post-translational conjugation of arginine to the amino termini of acceptor proteins which are then subject to degradation via the N-end rule pathway; may have a role in regulating stress response","termid":"PBO:0082295"}


id: PBO:0067516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 657, pseudogene","termid":"PBO:0067516"}


id: PBO:0048081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 2","termid":"PBO:0048081"}


id: SO:0001422
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a polypeptide, involved in the transition from one conformational state to another.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biochemical_region_of_peptide","termid":"SO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"conformational_switch","synonyms":[{"name":"polypeptide conformational switch","type":"exact"}],"termid":"SO:0001422"}


id: PBO:0003509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidic acid phosphatase (predicted)","termid":"PBO:0003509"}


id: PBO:0080116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV stimulated scaffold protein A","termid":"PBO:0080116"}


id: PBO:0083587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YDR535C is not an essential gene","termid":"PBO:0083587"}


id: PBO:0090879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELLA family acetyltransferase","termid":"PBO:0090879"}


id: PBO:0004961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-dehydropantoate 2-reductase (predicted)","termid":"PBO:0004961"}


id: PBO:0012028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP subunit Snu40 (predicted)","termid":"PBO:0012028"}


id: GO:0150202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transport across blood-brain barrier.","definition_xrefs":["PMID:29377008","PMID:30280653","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"},{"relation_name":"negatively_regulates","term_name":"transport across blood-brain barrier","termid":"GO:0150104"},{"relation_name":"part_of","term_name":"negative regulation of vascular permeability","termid":"GO:0043116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transport across blood-brain barrier","termid":"GO:0150202"}


id: PBO:0030737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_arrest_in_mitotic_G1_phase_during_nitrogen_starvation","termid":"PBO:0030737"}


id: PBO:0062139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 6","termid":"PBO:0062139"}


id: GO:0000161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A MAPK cascade that starts with the activation of a Ssk2/Win1 family MAP3K, which activates a Pbs2/Wis1 family MAP2K, resulting in the activation of a Hog1/Sty1 family MAPK. Hog1 then translocates from the cytosol into the nucleus where it affects the expression of a large number of genes. This cascade is activated by hyperosmolarity or other abiotic stresses and results in cellular responses such as cell cycle arrest.","definition_xrefs":["PMID:32794416","PMID:17604854","PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete osmosensory signaling MAPK cascade (obsolete GO:0000161)","synonyms":[{"name":"High Osmolarity Glycerol (HOG) MAPK pathway","type":"narrow"},{"name":"Hog1 MAPK pathway","type":"narrow"},{"name":"Hog1/Sty1 stress-activated MAPK cascade","type":"narrow"},{"name":"MAPK cascade involved in osmosensory signaling pathway","type":"exact"},{"name":"MAPKKK cascade during osmolarity sensing","type":"exact"},{"name":"MAPKKK cascade involved in osmosensory signaling pathway","type":"exact"},{"name":"MAPKKK cascade involved in osmosensory signalling pathway","type":"exact"},{"name":"activation of MAPK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"activation of MAPKK activity during osmolarity sensing","type":"narrow"},{"name":"activation of MAPKK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"activation of MAPKKK activity during osmolarity sensing","type":"narrow"},{"name":"activation of MAPKKK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"activation of Pbs2 kinase","type":"narrow"},{"name":"inactivation of MAPK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"osmolarity sensing, MAPKKK cascade","type":"exact"},{"name":"osmolarity sensing, activation of MAP kinase kinase activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAP kinase kinase kinase activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAPK activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAPKK activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAPKKK activity","type":"narrow"},{"name":"termination of MAPK activity during osmolarity sensing","type":"narrow"}],"termid":"GO:0000161"}


id: PBO:0065528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched domain containing 3 (gene/pseudogene)","termid":"PBO:0065528"}


id: GO:1902034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:23403623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic stem cell proliferation","termid":"GO:1902033"},{"relation_name":"is_a","term_name":"negative regulation of hemopoiesis","termid":"GO:1903707"},{"relation_name":"is_a","term_name":"negative regulation of stem cell proliferation","termid":"GO:2000647"},{"relation_name":"negatively_regulates","term_name":"hematopoietic stem cell proliferation","termid":"GO:0071425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hematopoietic stem cell proliferation","synonyms":[{"name":"down regulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"down regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"down-regulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"down-regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"downregulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"downregulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"inhibition of hematopoietic stem cell proliferation","type":"narrow"},{"name":"inhibition of hemopoietic stem cell proliferation","type":"narrow"},{"name":"negative regulation of hemopoietic stem cell proliferation","type":"exact"}],"termid":"GO:1902034"}


id: GO:0070685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection that forms at the site of macropinocytosis, a form of endocytosis that results in the uptake of relatively large amounts of extracellular fluid. The macropinocytic cup membrane selectively excludes certain proteins, such as H36 or PM4C4 in Dictyostelium, and the underlying cytoskeleton is enriched in F-actin and coronin.","definition_xrefs":["PMID:16968738","PMID:9044041","PMID:12538772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"macropinocytic cup","synonyms":[{"name":"crown","type":"exact"}],"termid":"GO:0070685"}


id: PBO:0067310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 396, pseudogene","termid":"PBO:0067310"}


id: PBO:0082087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase; synthesizes PRPP, which is required for nucleotide, histidine, and tryptophan biosynthesis; plays a key role in cell wall integrity (CWI) pathway; one of five related enzymes, which are active as heteromultimeric complexes; missense mutations in human homolog PRPS1 are associated with neuropathic Arts syndrome and Charcot-Marie Tooth (CMTX5) disease","termid":"PBO:0082087"}


id: PBO:0034504
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV_during_mitotic_S_phase","termid":"PBO:0034504"}


id: PBO:0038906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E1","termid":"PBO:0038906"}


id: GO:0097348
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell endocytic vesicle.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endocytic vesicle membrane","termid":"GO:0097348"}


id: GO:0048526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of expanding or inflating the folded imaginal disc-derived pupal wing, and the adhering of the dorsal and ventral surfaces, to form the mature adult wing.","definition_xrefs":["GOC:rc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing expansion","synonyms":[{"name":"wing expansion","type":"exact"},{"name":"wing inflation","type":"exact"}],"termid":"GO:0048526"}


id: PBO:0059620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP8 pseudogene 1","termid":"PBO:0059620"}


id: PBO:0042488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 12 pseudogene 1","termid":"PBO:0042488"}


id: PBO:0004716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L32 (predicted)","termid":"PBO:0004716"}


id: PBO:0055634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3073","termid":"PBO:0055634"}


id: PBO:0000882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bfr1 binding protein ortholog Sos7","termid":"PBO:0000882"}


id: GO:0043061
data:
  {"annotated_genes":["SJAG_04508","SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84005,89932],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"}]},"cv_name":"biological_process","definition":"A chromosome localization process whereby chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator), during meiosis II chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["PMID:10809666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"},{"relation_name":"part_of","term_name":"meiotic sister chromatid segregation","termid":"GO:0045144"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00678":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"meiotic metaphase II chromosome alignment","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043061","terms_by_termid":{"GO:0051456":null}}


id: GO:2000110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of macrophage apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid cell apoptotic process","termid":"GO:0033033"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte apoptotic process","termid":"GO:2000107"},{"relation_name":"is_a","term_name":"regulation of macrophage apoptotic process","termid":"GO:2000109"},{"relation_name":"negatively_regulates","term_name":"macrophage apoptotic process","termid":"GO:0071888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage apoptotic process","synonyms":[{"name":"negative regulation of AICD","type":"related"},{"name":"negative regulation of activation-induced cell death","type":"related"},{"name":"negative regulation of macrophage apoptosis","type":"narrow"}],"termid":"GO:2000110"}


id: PBO:0002144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF654 family protein","termid":"PBO:0002144"}


id: PR:Q9P3E8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC750.02c/SPBPB2B2.16c.","definition_xrefs":["UniProtKB:Q9P3E8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C750.02c/PB2B2.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.16c","synonyms":[{"name":"Spom972h-SPBPB2B2.16c","type":"exact"}],"termid":"PR:Q9P3E8"}


id: PBO:0038690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 1","termid":"PBO:0038690"}


id: PBO:0057196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 369","termid":"PBO:0057196"}


id: PBO:0044579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBI pseudogene 1","termid":"PBO:0044579"}


id: SO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Base sequence at the 3' end of a tRNA. The 3'-hydroxyl group on the terminal adenosine is the attachment point for the amino acid.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCA_tail","synonyms":[{"name":"CCA sequence","type":"exact"},{"name":"CCA tail","type":"exact"}],"termid":"SO:0001175"}


id: PATO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000353 secondary product composition value (obsolete PATO:0000353)","termid":"PATO:0000353"}


id: PR:O13908
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C22A12.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.17c","synonyms":[{"name":"Spom972h-SPAC22A12.17c","type":"exact"}],"termid":"PR:O13908"}


id: GO:0047784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + cortisol = CoA + cortisol 21-acetate.","definition_xrefs":["RHEA:17073","EC:2.3.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cortisol O-acetyltransferase activity","secondary_identifiers":["MetaCyc:CORTISOL-O-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R02837"],"synonyms":[{"name":"acetyl-CoA:cortisol O-acetyltransferase activity","type":"related"},{"name":"corticosteroid acetyltransferase activity","type":"related"},{"name":"corticosteroid-21-O-acetyltransferase activity","type":"related"},{"name":"cortisol acetyltransferase activity","type":"related"}],"termid":"GO:0047784"}


id: GO:0048215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Golgi vesicle fusion to target membrane.","definition_xrefs":["ISBN:0716731363","PMID:10219233","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of Golgi vesicle fusion to target membrane","termid":"GO:0048214"},{"relation_name":"positively_regulates","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of Golgi vesicle fusion to target membrane","synonyms":[{"name":"activation of Golgi vesicle fusion to target membrane","type":"narrow"},{"name":"stimulation of Golgi vesicle fusion to target membrane","type":"narrow"},{"name":"up regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"up-regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"upregulation of Golgi vesicle fusion to target membrane","type":"exact"}],"termid":"GO:0048215"}


id: PR:P36627
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cellular nucleic acid-binding protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23002:SF11","OMA:SCHPO00927","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular nucleic acid-binding protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D6.02c","secondary_identifiers":["UniProtKB:P36627"],"synonyms":[{"name":"Spom972h-CNBP","type":"exact"}],"termid":"PR:P36627"}


id: GO:0106371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + primary fluorescent chlorophyll catabolite + reduced [NADPH--hemoprotein reductase] = formate + 2 H+ + oxidized [NADPH--hemoprotein reductase] + primary fluorescent dioxobilin-type chlorophyll catabolite.","definition_xrefs":["RHEA:67172","PMID:23723324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"fluorescent chlorophyll catabolite monooxygenase (deformylase) activity","termid":"GO:0106371"}


id: GO:0021868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The unequal mitotic division of a forebrain radial glial cell that gives rise to a radial glial cell and a ventricular zone cell.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dph","PMID:16226447","GOC:dgh","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete ventricular zone cell-producing asymmetric radial glial cell division in forebrain (obsolete GO:0021868)","termid":"GO:0021868"}


id: PBO:0059446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A19, pseudogene","termid":"PBO:0059446"}


id: PBO:0059842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome associated GTPase 2","termid":"PBO:0059842"}


id: PBO:0003152
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.46","termid":"PBO:0003152"}


id: GO:0050928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"negatively_regulates","term_name":"positive chemotaxis","termid":"GO:0050918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis","synonyms":[{"name":"down regulation of positive chemotaxis","type":"exact"},{"name":"down-regulation of positive chemotaxis","type":"exact"},{"name":"downregulation of positive chemotaxis","type":"exact"},{"name":"inhibition of positive chemotaxis","type":"narrow"}],"termid":"GO:0050928"}


id: PR:Q09806
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2G11.04 gene.","definition_xrefs":["UniProtKB:Q09806","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2G11.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.04","synonyms":[{"name":"Spom972h-SPAC2G11.04","type":"exact"}],"termid":"PR:Q09806"}


id: PBO:0082507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of protein phosphatase 2A, PP2A; functionally redundant with Pph21p; C-terminally methylated; forms alternate complexes with several regulatory subunits; involved in signal transduction and regulation of mitosis; protein abundance increases in response to DNA replication stress; dephosphorylates Tel1p/Mec1p-phosphorylated Cdc13p to promote telomerase release from telomeres at G2/M; PPH22 has a paralog, PPH21, that arose from the whole genome duplication","termid":"PBO:0082507"}


id: PBO:0069498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 765, pseudogene","termid":"PBO:0069498"}


id: PR:O94505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tol1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1753.04","synonyms":[{"name":"3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DPNPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tol1","type":"exact"},{"name":"halotolerance protein tol1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"target of lithium protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94505"}


id: GO:2000985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ATP citrate synthase activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of ATP citrate synthase activity","termid":"GO:2000983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ATP citrate synthase activity","synonyms":[{"name":"positive regulation of ATP citrate (pro-S)-lyase activity","type":"exact"},{"name":"positive regulation of ATP-citrate (pro-S)-lyase activity","type":"exact"},{"name":"positive regulation of ATP-citrate (pro-S-)-lyase activity","type":"exact"},{"name":"positive regulation of ATP-citric lyase activity","type":"exact"},{"name":"positive regulation of ATP:citrate oxaloacetate-lyase ((pro-S)-CH(2)COO(-)->acetyl-CoA) (ATP- dephosphorylating) activity","type":"exact"},{"name":"positive regulation of ATP:citrate oxaloacetate-lyase [(pro-S)-CH2COO-rightacetyl-CoA] (ATP-dephosphorylating)","type":"related"},{"name":"positive regulation of acetyl-CoA:oxaloacetate C-acetyltransferase [(pro-S)-carboxymethyl-forming, ADP-phosphorylating]","type":"related"},{"name":"positive regulation of acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP- phosphorylating) activity","type":"exact"},{"name":"positive regulation of acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP-phosphorylating)","type":"exact"},{"name":"positive regulation of adenosine triphosphate citrate lyase activity","type":"exact"},{"name":"positive regulation of citrate cleavage enzyme activity","type":"related"},{"name":"positive regulation of citrate-ATP lyase activity","type":"exact"},{"name":"positive regulation of citric cleavage enzyme activity","type":"related"}],"termid":"GO:2000985"}


id: GO:0050385
data:
  {"annotated_genes":["SJAG_05287"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87876],"is_not":false,"summary":null,"term":"GO:0050385"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-ureidoglycolate = glyoxylate + urea.","definition_xrefs":["EC:4.3.2.3","RHEA:11304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"ureidoglycolate lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:UREIDOGLYCOLATE-LYASE-RXN","KEGG_REACTION:R00776"],"synonyms":[{"name":"(S)-ureidoglycolate urea-lyase (glyoxylate-forming)","type":"related"},{"name":"(S)-ureidoglycolate urea-lyase activity","type":"related"},{"name":"ureidoglycolase activity","type":"related"},{"name":"ureidoglycolatase activity","type":"related"},{"name":"ureidoglycolate hydrolase activity","type":"related"}],"termid":"GO:0050385","terms_by_termid":{"GO:0050385":null}}


id: PBO:0065236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 4","termid":"PBO:0065236"}


id: PR:Q9P792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nbr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZZ-type zinc finger-containing protein P35G2.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.11c","synonyms":[{"name":"Spom972h-nbr1","type":"exact"}],"termid":"PR:Q9P792"}


id: GO:1902627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of assembly of a large subunit precursor of preribosome.","definition_xrefs":["GOC:TermGenie","PMID:22735702","GO_REF:0000058","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"assembly of large subunit precursor of preribosome","termid":"GO:1902626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"regulation of assembly of large subunit precursor of preribosome","synonyms":[{"name":"regulation of 66S preribosome assembly","type":"narrow"},{"name":"regulation of 66S preribosome formation","type":"narrow"},{"name":"regulation of preribosome, large subunit precursor formation","type":"exact"}],"termid":"GO:1902627"}


id: PBO:0113333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; localizes to the ER and peroxisomes; authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0113333"}


id: PBO:0059741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 15","termid":"PBO:0059741"}


id: PBO:0075814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single stranded DNA binding protein 4","termid":"PBO:0075814"}


id: PBO:0054372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1766","termid":"PBO:0054372"}


id: FYPO:0001995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing polymyxin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on polymyxin B","synonyms":[{"name":"normal cell population growth in presence of polymyxin B","type":"exact"},{"name":"normal cell population growth on polymyxin B","type":"exact"},{"name":"normal cellular response to polymyxin B","type":"related"},{"name":"normal vegetative cell population growth on polymixin B","type":"exact"}],"termid":"FYPO:0001995"}


id: PBO:0063043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palladin, cytoskeletal associated protein","termid":"PBO:0063043"}


id: PBO:0062544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily I member 3 pseudogene","termid":"PBO:0062544"}


id: PR:P40984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SUMO-conjugating enzyme UBC9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00437","PRO:DNx","PANTHER:PTHR24067:SF32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-conjugating enzyme ubc9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.13","secondary_identifiers":["UniProtKB:P40984"],"synonyms":[{"name":"SUMO protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBE2I","type":"exact"},{"name":"ubiquitin carrier protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin carrier protein hus5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-conjugating enzyme E2-18 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase hus5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40984"}


id: GO:0044614
data:
  {"annotated_genes":["SJAG_03847","SJAG_03299","SJAG_01013","SJAG_01065"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85131,90091,99094,104787],"is_not":false,"summary":null,"term":"GO:0044614"}]},"cv_name":"cellular_component","definition":"Filamentous extensions on cytoplasmic face of the nuclear pore complex (NPC). In S. cerevisiae, Nup159p, Nup82p, and Nup42p contribute to the cytoplasmic filaments. In vertebrates, Nup358 is a major component.","definition_xrefs":["PMID:19524430","PMID:20947011","PMID:22419078","GOC:dgf","PMID:18046406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01065":null,"SJAG_03299":null,"SJAG_03847":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005643"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005643"],"is_obsolete":false,"name":"nuclear pore cytoplasmic filaments","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic fibers of the NPC","type":"exact"},{"name":"cytoplasmic fibers of the nuclear pore complex","type":"exact"}],"termid":"GO:0044614","terms_by_termid":{"GO:0044614":null}}


id: PBO:0074307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 1","termid":"PBO:0074307"}


id: PBO:0046126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E pseudogene 5","termid":"PBO:0046126"}


id: PBO:0073062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDA1 domain containing 1 pseudogene 4","termid":"PBO:0073062"}


id: GO:0071053
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to the transmembrane metallopeptidase ADAM2.","definition_xrefs":["PMID:11882657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha9-beta1 integrin-ADAM2 complex","synonyms":[{"name":"ITGA9-ITGB1-ADAM2 complex","type":"narrow"}],"termid":"GO:0071053"}


id: PR:Q92367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1652.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino-acid permease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1652.02","synonyms":[{"name":"Spom972h-SPBC1652.02","type":"exact"}],"termid":"PR:Q92367"}


id: PBO:0078454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 6 (pseudogene)","termid":"PBO:0078454"}


id: PBO:0087642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p); complex is localized to DNA replication origins and implicated in assembly of the DNA replication machinery","termid":"PBO:0087642"}


id: PBO:0089539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane calcium ion transmembrane transporter","termid":"PBO:0089539"}


id: GO:0044144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of growth of symbiont involved in interaction with host (obsolete GO:0044144)","synonyms":[{"name":"modulation of growth of symbiont during interaction with host","type":"related"}],"termid":"GO:0044144"}


id: GO:0008872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucarate = 5-dehydro-4-deoxy-D-glucarate + H2O.","definition_xrefs":["EC:4.2.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucarate dehydratase activity","secondary_identifiers":["RHEA:14573","MetaCyc:GLUCARDEHYDRA-RXN"],"synonyms":[{"name":"D-glucarate dehydratase activity","type":"related"},{"name":"D-glucarate hydro-lyase (5-dehydro-4-deoxy-D-glucarate-forming)","type":"related"},{"name":"D-glucarate hydro-lyase activity","type":"related"}],"termid":"GO:0008872"}


id: GO:0006617
data:
  {"annotated_genes":["SJAG_02456","SJAG_01759","SJAG_01282"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87728,110461,111220],"is_not":false,"summary":null,"term":"GO:0006617"}]},"cv_name":"biological_process","definition":"The process in which SRP binds to the signal peptide in a nascent protein, causing protein elongation to pause, during cotranslational membrane targeting.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"SRP-dependent cotranslational protein targeting to membrane","termid":"GO:0006614"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_02456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003","GO:0006605"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SRP-dependent cotranslational membrane targeting, signal sequence recognition","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting, signal sequence recognition","type":"exact"},{"name":"signal sequence recognition during SRP-dependent cotranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0006617","terms_by_termid":{"GO:0006617":null}}


id: PBO:0066576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHEB like 1","termid":"PBO:0066576"}


id: GO:0071334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rhamnose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to rhamnose","termid":"GO:0032149"},{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to rhamnose stimulus","synonyms":[{"name":"cellular response to L-rhamnose stimulus","type":"narrow"}],"termid":"GO:0071334"}


id: PBO:0085075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-succinyl-5-aminoimidazole-4-carboxamide ribotide synthetase; required for 'de novo' purine nucleotide biosynthesis; red pigment accumulates in mutant cells deprived of adenine; protein abundance increases in response to DNA replication stress","termid":"PBO:0085075"}


id: PR:P87179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wsc1 gene.","definition_xrefs":["UniProtKB:P87179","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall integrity and stress response component 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.01c","synonyms":[{"name":"Spom972h-wsc1","type":"exact"}],"termid":"PR:P87179"}


id: GO:0140320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding and sequestering PAMP ligands in order to prevent them from binding and activating to the host PAMP receptor. Usually this activity is encoded by a symbiont or a pathogen to prevent activation of the host innate immune response.","definition_xrefs":["PMID:20724636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor decoy activity","termid":"GO:0140319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140313","GO:0003674"],"is_obsolete":false,"name":"PAMP receptor decoy activity","synonyms":[{"name":"pathogen-associated molecular pattern receptor decoy activity","type":"exact"},{"name":"pattern recognition receptor decoy activity","type":"exact"}],"termid":"GO:0140320"}


id: GO:0006749
data:
  {"annotated_genes":["SJAG_01162","SJAG_00988","SJAG_01351","SJAG_00903","SJAG_03494","SJAG_04726","SJAG_03316","SJAG_02599","SJAG_04858","SJAG_01995","SJAG_05181","SJAG_01612"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84113,95373,98897,101306],"is_not":false,"summary":null,"term":"GO:0006749"},{"annotations":[89400,104528,93126,114242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[104812,95303,98364,94480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006751"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01351":null,"SJAG_01612":null,"SJAG_01995":null,"SJAG_02599":null,"SJAG_03316":null,"SJAG_03494":null,"SJAG_04726":null,"SJAG_04858":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glutathione metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutathione metabolism","type":"exact"},{"name":"oxidized glutathione reduction","type":"narrow"}],"termid":"GO:0006749","terms_by_termid":{"GO:0006749":null,"GO:0006750":null,"GO:0006751":null}}


